INFERNAL1/a [1.1.5 | Sep 2023] NAME TB9Cs1H3 ACC RF01553 DESC Trypanosomatid snoRNA TB9Cs1H3 STATES 199 NODES 56 CLEN 65 W 82 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 20:31:11 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01553/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.411133 CKSUM 2090961366 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.50 NC 34.80 EFP7GF -8.0578 0.72213 ECMLC 0.63824 -6.54753 2.56394 1600000 402464 0.002982 ECMGC 0.45576 -16.53839 -4.22826 1600000 109309 0.003659 ECMLI 0.64869 -4.74541 3.57489 1600000 264981 0.004529 ECMGI 0.46934 -12.56468 -1.23310 1600000 81620 0.004901 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 102 -7.133 -7.340 -0.047 -5.754 IL 1 1 2 1 4 1 21 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 21 82 102 -8.137 -0.018 -6.791 -1.811 -1.751 -2.559 1.700 D 4 2 3 5 3 0 15 80 100 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 20 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 20 81 100 -8.137 -0.018 -6.791 -1.946 -3.219 1.794 -2.606 D 7 5 3 8 3 0 15 79 99 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 19 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 19 80 99 -8.137 -0.018 -6.791 0.361 0.636 -1.321 -0.393 D 10 8 3 11 3 0 14 78 98 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 18 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - c - - - ML 12 11 3 14 3 1 18 79 98 -8.137 -0.018 -6.791 -0.511 0.616 0.011 -0.399 D 13 11 3 14 3 0 13 77 97 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 18 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 18 78 97 -8.517 -0.017 -6.834 1.784 -2.722 -2.319 -2.300 D 16 14 3 17 3 0 12 76 96 -5.620 -0.734 -1.403 IL 17 17 3 17 3 1 16 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 67 - A - - MR 18 17 3 20 3 1 17 77 96 -8.517 -0.017 -6.834 1.784 -2.722 -2.319 -2.300 D 19 17 3 20 3 0 10 75 95 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 16 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 66 - G - - MR 21 20 3 23 3 1 17 76 95 -8.517 -0.017 -6.834 -1.946 -3.219 1.794 -2.606 D 22 20 3 23 3 0 9 74 94 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 15 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 65 - A - - MR 24 23 3 26 3 1 16 75 94 -8.517 -0.017 -6.834 1.784 -2.722 -2.319 -2.300 D 25 23 3 26 3 0 9 73 93 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 14 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 64 - G - - MR 27 26 3 29 5 1 16 74 93 -7.245 -0.035 -7.061 -7.273 -8.164 -1.946 -3.219 1.794 -2.606 D 28 26 3 29 5 0 8 72 92 -5.352 -0.707 -2.978 -4.409 -2.404 IR 29 29 3 29 5 1 12 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 63 A U - - MP 30 29 3 34 6 2 17 73 92 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.112 -3.065 -4.103 3.505 -4.607 -5.704 -0.285 -4.123 -3.986 0.732 -4.549 -0.493 -0.701 -4.835 -2.224 -2.921 ML 31 29 3 34 6 1 10 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 3 34 6 1 9 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 3 34 6 0 5 69 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 11 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 12 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 62 C G - - MP 36 35 6 40 6 2 16 71 90 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.930 -4.869 -4.554 -1.070 -3.194 -4.916 3.653 -4.042 -4.619 -0.878 -4.836 -2.823 0.279 -4.973 -0.912 -3.446 ML 37 35 6 40 6 1 9 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 9 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 4 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 11 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 11 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 61 G C - - MP 42 41 6 46 6 2 15 69 88 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.021 -2.715 -4.048 0.787 -4.802 -4.645 -0.220 -4.404 -3.949 3.197 -4.355 1.386 -0.494 -4.046 -2.197 -2.929 ML 43 41 6 46 6 1 9 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 8 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 4 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 10 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 11 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 60 C G - - MP 48 47 6 52 6 2 14 67 86 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.930 -4.869 -4.554 -1.070 -3.194 -4.916 3.653 -4.042 -4.619 -0.878 -4.836 -2.823 0.279 -4.973 -0.912 -3.446 ML 49 47 6 52 6 1 8 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 8 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 4 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 10 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 10 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 59 g c - - MP 54 53 6 58 6 2 13 65 84 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -3.510 -2.464 -3.532 1.882 -4.149 -4.418 0.254 -3.882 -3.582 2.671 -4.029 1.328 -0.010 -3.658 -1.673 -2.447 ML 55 53 6 58 6 1 8 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 7 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 3 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 9 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 9 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 58 C G - - MP 60 59 6 64 6 2 11 63 82 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.930 -4.869 -4.554 -1.070 -3.194 -4.916 3.653 -4.042 -4.619 -0.878 -4.836 -2.823 0.279 -4.973 -0.912 -3.446 ML 61 59 6 64 6 1 7 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 5 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 3 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 8 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 8 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 57 U G - - MP 66 65 6 70 4 2 9 61 80 -7.133 -7.340 -0.047 -5.754 -4.450 -4.384 -4.070 -0.685 -2.723 -4.436 1.571 -3.527 -4.114 -0.553 -4.369 -2.375 0.675 -4.500 3.205 -2.967 ML 67 65 6 70 4 1 6 61 81 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 4 60 80 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 3 59 79 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 8 62 82 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - A - - - ML 72 71 6 74 3 1 8 58 78 -8.137 -0.018 -6.791 1.784 -2.722 -2.319 -2.300 D 73 71 6 74 3 0 2 57 76 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 7 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - U - - - ML 75 74 3 77 3 1 7 57 77 -8.137 -0.018 -6.791 -1.811 -1.751 -2.559 1.700 D 76 74 3 77 3 0 1 56 75 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - U - - - ML 78 77 3 80 3 1 6 56 76 -2.220 -0.365 -6.791 -1.811 -1.751 -2.559 1.700 D 79 77 3 80 3 0 1 54 73 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 6 56 76 -2.076 -0.461 -4.776 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - G - - - ML 81 80 3 83 3 1 6 54 74 -8.137 -0.018 -6.791 -1.946 -3.219 1.794 -2.606 D 82 80 3 83 3 0 0 53 73 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 5 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - C - - - ML 84 83 3 86 3 1 5 53 73 -8.137 -0.018 -6.791 -2.165 1.721 -2.997 -1.494 D 85 83 3 86 3 0 0 52 72 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - U - - - ML 87 86 3 89 3 1 4 52 72 -8.517 -0.017 -6.834 -1.811 -1.751 -2.559 1.700 D 88 86 3 89 3 0 0 51 70 -5.620 -0.734 -1.403 IL 89 89 3 89 3 1 3 53 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 56 - A - - MR 90 89 3 92 3 1 4 51 71 -8.517 -0.017 -6.834 1.784 -2.722 -2.319 -2.300 D 91 89 3 92 3 0 0 50 69 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 2 52 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 55 - G - - MR 93 92 3 95 3 1 3 50 70 -8.517 -0.017 -6.834 -1.946 -3.219 1.794 -2.606 D 94 92 3 95 3 0 0 49 68 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 2 51 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 54 - U - - MR 96 95 3 98 3 1 3 49 69 -8.517 -0.017 -6.834 -1.811 -1.751 -2.559 1.700 D 97 95 3 98 3 0 0 48 67 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 50 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 53 - C - - MR 99 98 3 101 3 1 2 48 68 -8.517 -0.017 -6.834 -2.165 1.721 -2.997 -1.494 D 100 98 3 101 3 0 0 47 66 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 49 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 52 - C - - MR 102 101 3 104 3 1 2 47 67 -8.517 -0.017 -6.834 -2.165 1.721 -2.997 -1.494 D 103 101 3 104 3 0 0 46 65 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 48 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 51 - U - - MR 105 104 3 107 3 1 2 46 66 -8.517 -0.017 -6.834 -1.811 -1.751 -2.559 1.700 D 106 104 3 107 3 0 0 45 64 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 47 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 50 - u - - MR 108 107 3 110 5 1 1 45 65 -7.245 -0.035 -7.061 -7.273 -8.164 0.136 -0.946 -1.276 0.977 D 109 107 3 110 5 0 0 44 63 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 20 49 C G - - MP 111 110 3 115 6 2 2 44 64 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -3.992 -3.985 -3.794 -0.246 -2.616 -4.287 3.019 -3.373 -3.818 -0.057 -4.164 -2.018 0.982 -4.097 1.592 -2.682 ML 112 110 3 115 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 21 48 C G - - MP 117 116 6 121 6 2 2 42 62 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.930 -4.869 -4.554 -1.070 -3.194 -4.916 3.653 -4.042 -4.619 -0.878 -4.836 -2.823 0.279 -4.973 -0.912 -3.446 ML 118 116 6 121 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 22 47 C G - - MP 123 122 6 127 6 2 2 40 60 -9.181 -9.120 -0.020 -7.897 -8.176 -8.571 -4.930 -4.869 -4.554 -1.070 -3.194 -4.916 3.653 -4.042 -4.619 -0.878 -4.836 -2.823 0.279 -4.973 -0.912 -3.446 ML 124 122 6 127 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 23 46 G C - - MP 129 128 6 133 4 2 2 38 58 -7.133 -7.340 -0.047 -5.754 -3.828 -2.644 -3.833 1.867 -4.434 -4.538 0.099 -4.177 -3.827 3.090 -4.245 -0.259 -0.199 -3.873 -1.877 -2.730 ML 130 128 6 133 4 1 1 39 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 38 58 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 37 57 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 40 60 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 24 - c - - - ML 135 134 6 137 3 1 1 36 55 -8.137 -0.018 -6.791 0.361 0.636 -1.321 -0.393 D 136 134 6 137 3 0 0 35 54 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 25 - u - - - ML 138 137 3 140 3 1 1 35 54 -8.137 -0.018 -6.791 -0.870 0.213 -1.646 0.981 D 139 137 3 140 3 0 0 34 53 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 26 - G - - - ML 141 140 3 143 3 1 1 34 53 -8.137 -0.018 -6.791 -1.946 -3.219 1.794 -2.606 D 142 140 3 143 3 0 0 33 52 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 27 - c - - - ML 144 143 3 146 3 1 1 33 52 -8.137 -0.365 -2.184 -0.511 0.616 0.011 -0.399 D 145 143 3 146 3 0 0 32 51 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 28 - u - - - ML 147 146 3 149 3 1 1 32 51 -7.795 -0.023 -6.449 -0.284 -0.852 0.286 0.491 D 148 146 3 149 3 0 0 31 50 -7.852 -0.350 -2.244 IL 149 149 3 149 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 29 - G - - - ML 150 149 3 152 3 1 1 31 50 -8.137 -0.018 -6.791 -1.946 -3.219 1.794 -2.606 D 151 149 3 152 3 0 0 29 49 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 30 - c - - - ML 153 152 3 155 3 1 1 29 48 -8.137 -0.018 -6.791 -0.901 0.812 -1.716 0.490 D 154 152 3 155 3 0 0 28 47 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - g - - - ML 156 155 3 158 3 1 1 28 47 -8.137 -0.018 -6.791 0.445 -1.640 0.877 -1.055 D 157 155 3 158 3 0 0 27 46 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - U - - - ML 159 158 3 161 3 1 1 27 46 -8.137 -0.018 -6.791 -1.811 -1.751 -2.559 1.700 D 160 158 3 161 3 0 0 26 45 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - G - - - ML 162 161 3 164 3 1 1 26 45 -8.137 -0.018 -6.791 -1.946 -3.219 1.794 -2.606 D 163 161 3 164 3 0 0 25 44 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - u - - - ML 165 164 3 167 3 1 1 25 44 -8.137 -0.018 -6.791 0.336 -0.005 -1.086 0.345 D 166 164 3 167 3 0 0 24 43 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - C - - - ML 168 167 3 170 3 1 1 24 43 -8.137 -0.018 -6.791 -2.165 1.721 -2.997 -1.494 D 169 167 3 170 3 0 0 23 42 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - g - - - ML 171 170 3 173 3 1 1 23 41 -8.137 -0.018 -6.791 -0.520 -1.184 0.759 0.226 D 172 170 3 173 3 0 0 22 41 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - a - - - ML 174 173 3 176 3 1 1 22 40 -8.137 -0.018 -6.791 0.991 -1.546 0.218 -0.980 D 175 173 3 176 3 0 0 21 40 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - u - - - ML 177 176 3 179 3 1 1 20 39 -8.137 -0.018 -6.791 -0.870 0.213 -1.646 0.981 D 178 176 3 179 3 0 0 20 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - g - - - ML 180 179 3 182 3 1 1 19 38 -8.137 -0.018 -6.791 -0.520 -1.184 0.759 0.226 D 181 179 3 182 3 0 0 19 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - u - - - ML 183 182 3 185 3 1 1 18 36 -8.137 -0.018 -6.791 0.207 0.011 -1.111 0.459 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - g - - - ML 186 185 3 188 3 1 1 16 35 -8.137 -0.018 -6.791 -0.479 -0.120 0.752 -0.561 D 187 185 3 188 3 0 0 16 35 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - C - - - ML 189 188 3 191 3 1 1 15 33 -2.220 -0.365 -6.791 -2.165 1.721 -2.997 -1.494 D 190 188 3 191 3 0 0 13 32 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 15 33 -2.076 -0.461 -4.776 0.000 0.000 0.000 0.000 [ MATL 53 ] 44 - a - - - ML 192 191 3 194 3 1 1 13 31 -8.137 -0.018 -6.791 0.917 -0.025 -1.220 -0.515 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 45 - g - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -0.520 -1.184 0.759 0.226 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB9Cs1H3 ACC RF01553 DESC Trypanosomatid snoRNA TB9Cs1H3 LENG 65 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 20:31:11 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01553/CM NSEQ 3 EFFN 2.475586 CKSUM 2090961366 STATS LOCAL MSV -8.6340 0.72213 STATS LOCAL VITERBI -9.2909 0.72213 STATS LOCAL FORWARD -3.3997 0.72213 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.61160 1.38007 1.18741 1.41116 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.67010 2.62387 3.18988 0.20205 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.76586 3.65257 0.13752 3.22788 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 1.13551 0.93859 2.31371 1.66776 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 1.75174 0.95203 1.37506 1.67265 4 c - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.14458 3.30327 3.02111 3.01376 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.31665 2.84986 1.88781 2.77801 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.26184 0.22494 3.04418 2.15867 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.07423 2.79066 0.29789 2.65092 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.26148 0.22497 3.04401 2.15861 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 1.36993 2.46588 0.57520 2.31926 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.25946 0.22518 3.04303 2.15825 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.99624 1.60794 2.79612 0.37298 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.14458 3.30327 3.02111 3.01376 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.67010 2.62387 3.18988 0.20205 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.67010 2.62387 3.18988 0.20205 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.29344 1.44784 3.95124 0.15627 1.93327 1.09861 0.40547 16 2.76586 3.65257 0.13752 3.22788 17 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.92395 0.18641 3.50027 2.45160 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.67010 2.62387 3.18988 0.20205 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.71139 0.64299 2.48917 1.12436 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.26107 0.22501 3.04381 2.15854 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.26167 0.22495 3.04410 2.15864 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 1.39203 2.57930 0.52767 2.45775 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 1.13551 0.93859 2.31371 1.66776 24 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.00247 1.23511 2.54196 0.70222 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.76586 3.65257 0.13752 3.22788 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 1.75174 0.95203 1.37506 1.67265 27 c - - _ 1.38629 1.38629 1.38629 1.38629 0.29344 3.95124 1.44784 1.46634 0.26236 1.09861 0.40547 27 1.58904 1.98334 1.18393 1.04356 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05029 3.70809 3.70809 1.46634 0.26236 0.15153 1.96179 28 2.76586 3.65257 0.13752 3.22788 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.02493 0.81690 2.59135 1.04617 30 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 1.07727 2.53817 0.77212 2.13341 31 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.67010 2.62387 3.18988 0.20205 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.76586 3.65257 0.13752 3.22788 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 1.15221 1.38743 2.14577 1.14769 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.92395 0.18641 3.50027 2.45160 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 1.75668 2.21730 0.85292 1.22994 36 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.69487 2.47265 1.23212 2.08080 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.00247 1.23511 2.54196 0.70222 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 1.75668 2.21730 0.85292 1.22994 39 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 1.24297 1.37586 2.16296 1.06750 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 1.72898 1.46799 0.85646 1.78687 41 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.92395 0.18641 3.50027 2.45160 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.29344 1.44784 3.95124 0.15627 1.93327 1.09861 0.40547 42 0.74590 1.40097 2.24278 1.75346 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 1.75668 2.21730 0.85292 1.22994 45 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.69522 0.60215 2.39380 1.22569 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.43855 3.21398 0.19370 3.02388 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 2.43996 3.21594 0.19332 3.02622 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 1.95567 2.65589 0.35005 2.48124 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 1.29287 2.05109 2.28036 0.70385 50 u - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 2.67010 2.62387 3.18988 0.20205 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 2.92395 0.18641 3.50027 2.45160 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 2.92395 0.18641 3.50027 2.45160 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 2.67010 2.62387 3.18988 0.20205 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.76586 3.65257 0.13752 3.22788 55 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 0.14458 3.30327 3.02111 3.01376 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 2.15684 2.97439 0.26327 2.73809 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.43611 3.21058 0.19437 3.01983 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 57 2.55671 0.87809 2.27425 0.90636 59 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 2.43759 3.21264 0.19396 3.02228 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 2.88440 0.53181 2.60472 1.26355 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 2.44010 3.21614 0.19328 3.02645 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 61 3.01599 2.19088 2.66590 0.26182 63 U - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 62 2.76586 3.65257 0.13752 3.22788 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 63 0.14458 3.30327 3.02111 3.01376 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 64 2.76586 3.65257 0.13752 3.22788 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 65 0.14458 3.30327 3.02111 3.01376 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * //