INFERNAL1/a [1.1.4 | Dec 2020] NAME TB8Cs4H2 ACC RF01551 DESC Trypanosomatid snoRNA TB8Cs4H2 STATES 214 NODES 57 CLEN 70 W 86 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:27 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.832031 CKSUM 2378764388 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 56.30 NC 34.30 EFP7GF -4.6296 0.72944 ECMLC 0.66065 -5.75583 2.74945 1600000 330751 0.003628 ECMGC 0.42972 -16.16760 -3.57768 1600000 89469 0.004471 ECMLI 0.62281 -4.66393 3.97096 1600000 259887 0.004617 ECMGI 0.47923 -10.87268 -0.16594 1600000 67677 0.005910 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 86 106 -6.907 -7.114 -0.055 -5.529 IL 1 1 2 1 4 1 26 90 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 89 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 25 86 106 -7.927 -0.021 -6.581 1.702 -2.296 -1.936 -1.831 D 4 2 3 5 3 0 20 85 105 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 24 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 24 85 105 -7.927 -0.021 -6.581 0.629 0.228 -1.084 -0.302 D 7 5 3 8 3 0 19 84 104 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 24 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 23 84 104 -8.320 -0.019 -6.637 0.629 0.228 -1.084 -0.302 D 10 8 3 11 3 0 18 83 103 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 22 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 71 - A - - MR 12 11 3 14 3 1 23 83 103 -8.320 -0.019 -6.637 1.702 -2.296 -1.936 -1.831 D 13 11 3 14 3 0 16 81 101 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 21 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 70 - G - - MR 15 14 3 17 3 1 22 82 102 -8.320 -0.019 -6.637 -1.500 -2.708 1.705 -2.094 D 16 14 3 17 3 0 15 80 100 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 21 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 69 - A - - MR 18 17 3 20 3 1 22 81 101 -8.320 -0.019 -6.637 1.702 -2.296 -1.936 -1.831 D 19 17 3 20 3 0 14 79 99 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 20 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 68 - a - - MR 21 20 3 23 5 1 21 80 100 -7.061 -0.040 -6.876 -7.088 -7.980 0.629 0.228 -1.084 -0.302 D 22 20 3 23 5 0 13 79 99 -5.352 -0.707 -2.978 -4.409 -2.404 IR 23 23 3 23 5 1 18 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 67 C G - - MP 24 23 3 28 6 2 22 79 99 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.478 -4.377 -4.180 -0.616 -2.913 -4.601 3.528 -3.716 -4.226 -0.365 -4.495 -2.323 0.608 -4.551 -0.618 -3.069 ML 25 23 3 28 6 1 15 78 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 3 28 6 1 15 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 3 28 6 0 11 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 17 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 17 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 66 G C - - MP 30 29 6 34 6 2 21 77 97 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.061 -4.765 0.246 -5.135 -4.666 -0.517 -5.003 -4.282 3.621 -4.624 -0.757 -0.904 -4.422 -2.550 -3.643 ML 31 29 6 34 6 1 15 76 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 14 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 10 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 16 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 17 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 65 A U - - MP 36 35 6 40 6 2 20 75 95 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.732 -2.779 -3.755 3.292 -4.064 -5.121 0.232 -3.801 -3.649 1.142 -4.194 -0.265 -0.185 -4.318 -1.709 -2.592 ML 37 35 6 40 6 1 14 74 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 14 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 10 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 16 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 16 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 64 g c - - MP 42 41 6 46 6 2 18 73 93 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.653 -2.502 -3.709 1.013 -4.297 -4.484 0.150 -3.996 -3.624 2.944 -4.067 1.637 -0.135 -3.818 -1.804 -2.587 ML 43 41 6 46 6 1 14 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 13 72 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 9 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 15 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 15 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 63 G C - - MP 48 47 6 52 6 2 17 71 91 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.061 -4.765 0.246 -5.135 -4.666 -0.517 -5.003 -4.282 3.621 -4.624 -0.757 -0.904 -4.422 -2.550 -3.643 ML 49 47 6 52 6 1 13 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 12 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 9 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 14 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 14 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 62 G C - - MP 54 53 6 58 4 2 15 69 89 -6.907 -7.114 -0.055 -5.529 -4.672 -3.061 -4.765 0.246 -5.135 -4.666 -0.517 -5.003 -4.282 3.621 -4.624 -0.757 -0.904 -4.422 -2.550 -3.643 ML 55 53 6 58 4 1 12 69 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 10 69 89 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 9 68 88 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 14 71 91 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 13 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - a - - - ML 60 59 6 62 3 1 13 67 86 -7.927 -0.021 -6.581 0.629 0.228 -1.084 -0.302 D 61 59 6 62 3 0 8 65 85 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - C - - - ML 63 62 3 65 3 1 13 66 85 -7.927 -0.021 -6.581 -1.650 1.599 -2.471 -1.083 D 64 62 3 65 3 0 8 64 84 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - A - - - ML 66 65 3 68 3 1 12 65 84 -7.927 -0.021 -6.581 1.702 -2.296 -1.936 -1.831 D 67 65 3 68 3 0 7 63 83 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 11 67 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - U - - - ML 69 68 3 71 3 1 11 63 83 -7.927 -0.021 -6.581 -1.417 -1.425 -2.147 1.598 D 70 68 3 71 3 0 6 62 82 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 10 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - C - - - ML 72 71 3 74 3 1 11 62 82 -7.927 -0.021 -6.581 -1.650 1.599 -2.471 -1.083 D 73 71 3 74 3 0 6 61 81 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - G - - - ML 75 74 3 77 3 1 10 61 81 -8.320 -0.019 -6.637 -1.500 -2.708 1.705 -2.094 D 76 74 3 77 3 0 5 60 80 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 9 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 61 - A - - MR 78 77 3 80 3 1 9 60 80 -8.320 -0.019 -6.637 1.702 -2.296 -1.936 -1.831 D 79 77 3 80 3 0 4 59 78 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 8 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 60 - C - - MR 81 80 3 83 3 1 9 59 79 -8.320 -0.019 -6.637 -1.650 1.599 -2.471 -1.083 D 82 80 3 83 3 0 4 58 77 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 7 60 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 59 - A - - MR 84 83 3 86 3 1 8 58 78 -8.320 -0.019 -6.637 1.702 -2.296 -1.936 -1.831 D 85 83 3 86 3 0 3 57 76 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 7 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 58 - A - - MR 87 86 3 89 3 1 8 57 77 -8.320 -0.019 -6.637 1.702 -2.296 -1.936 -1.831 D 88 86 3 89 3 0 3 56 75 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 6 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 57 - C - - MR 90 89 3 92 3 1 7 56 76 -8.320 -0.019 -6.637 -1.650 1.599 -2.471 -1.083 D 91 89 3 92 3 0 2 55 74 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 6 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 56 - A - - MR 93 92 3 95 3 1 7 55 75 -8.320 -0.019 -6.637 1.702 -2.296 -1.936 -1.831 D 94 92 3 95 3 0 1 54 73 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 5 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 55 - A - - MR 96 95 3 98 5 1 6 54 74 -7.061 -0.040 -6.876 -7.088 -7.980 1.702 -2.296 -1.936 -1.831 D 97 95 3 98 5 0 1 53 73 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 4 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 54 U A - - MP 99 98 3 103 6 2 7 53 73 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.115 -3.938 -3.961 -0.238 -2.920 -4.532 1.407 -3.610 -3.967 0.027 -4.344 -1.839 3.291 -4.269 -0.598 -2.799 ML 100 98 3 103 6 1 3 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 3 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 4 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 4 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 53 C G - - MP 105 104 6 109 6 2 7 51 71 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.478 -4.377 -4.180 -0.616 -2.913 -4.601 3.528 -3.716 -4.226 -0.365 -4.495 -2.323 0.608 -4.551 -0.618 -3.069 ML 106 104 6 109 6 1 3 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 2 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 3 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 3 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 52 G C - - MP 111 110 6 115 6 2 6 49 69 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.061 -4.765 0.246 -5.135 -4.666 -0.517 -5.003 -4.282 3.621 -4.624 -0.757 -0.904 -4.422 -2.550 -3.643 ML 112 110 6 115 6 1 2 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 2 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 3 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 3 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 51 G C - - MP 117 116 6 121 4 2 4 47 67 -6.907 -7.114 -0.055 -5.529 -4.672 -3.061 -4.765 0.246 -5.135 -4.666 -0.517 -5.003 -4.282 3.621 -4.624 -0.757 -0.904 -4.422 -2.550 -3.643 ML 118 116 6 121 4 1 1 48 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 47 67 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 46 66 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 3 49 69 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 2 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - a - - - ML 123 122 6 125 3 1 3 45 64 -7.927 -0.021 -6.581 0.686 -1.366 0.505 -0.776 D 124 122 6 125 3 0 0 44 63 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 2 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - g - - - ML 126 125 3 128 3 1 2 44 63 -8.320 -0.019 -6.637 -0.317 0.174 0.334 -0.307 D 127 125 3 128 3 0 0 43 62 -5.620 -0.734 -1.403 IL 128 128 3 128 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 50 - a - - MR 129 128 3 131 3 1 2 43 62 -8.320 -0.019 -6.637 0.561 -0.831 -1.032 0.559 D 130 128 3 131 3 0 0 41 60 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 49 - a - - MR 132 131 3 134 3 1 2 42 61 -8.320 -0.019 -6.637 0.629 0.228 -1.084 -0.302 D 133 131 3 134 3 0 0 40 60 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 48 - a - - MR 135 134 3 137 5 1 1 41 60 -7.061 -0.040 -6.876 -7.088 -7.980 0.712 -1.361 0.472 -0.773 D 136 134 3 137 5 0 0 39 59 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 22 47 g c - - MP 138 137 3 142 4 2 2 40 59 -1.996 -8.073 -0.510 -4.526 -3.664 -2.510 -3.717 1.005 -4.306 -4.480 0.145 -4.010 -3.634 2.965 -4.075 1.597 -0.140 -3.818 -1.810 -2.598 ML 139 137 3 142 4 1 1 39 58 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 4 1 1 38 58 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 141 137 3 142 4 0 0 37 56 -12.737 -14.007 -2.036 -0.404 IL 142 142 5 142 4 1 1 39 58 -3.686 -5.189 -0.303 -3.567 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 46 - C - - MR 144 143 6 146 5 1 1 37 57 -7.061 -0.040 -6.876 -7.088 -7.980 -1.650 1.599 -2.471 -1.083 D 145 143 6 146 5 0 0 36 55 -5.352 -0.707 -2.978 -4.409 -2.404 IR 146 146 3 146 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 24 45 C G - - MP 147 146 3 151 6 2 2 36 56 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.478 -4.377 -4.180 -0.616 -2.913 -4.601 3.528 -3.716 -4.226 -0.365 -4.495 -2.323 0.608 -4.551 -0.618 -3.069 ML 148 146 3 151 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 3 151 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 3 151 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 25 44 c g - - MP 153 152 6 157 6 2 2 34 54 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.678 -3.664 -3.525 0.001 -2.441 -4.051 2.698 -3.171 -3.555 0.221 -3.920 -1.734 1.143 -3.806 1.938 -2.444 ML 154 152 6 157 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 26 43 C G - - MP 159 158 6 163 6 2 2 32 52 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.478 -4.377 -4.180 -0.616 -2.913 -4.601 3.528 -3.716 -4.226 -0.365 -4.495 -2.323 0.608 -4.551 -0.618 -3.069 ML 160 158 6 163 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 31 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 27 42 u g - - MP 165 164 6 169 4 2 2 30 50 -6.907 -7.114 -0.055 -5.529 -2.718 -2.747 -2.774 0.435 -2.230 1.272 1.705 -2.791 -2.824 0.663 -3.280 -1.124 1.125 -2.959 1.723 -1.887 ML 166 164 6 169 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 30 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 29 49 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 32 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 28 - G - - - ML 171 170 6 173 3 1 1 28 47 -7.927 -0.433 -1.972 -1.500 -2.708 1.705 -2.094 D 172 170 6 173 3 0 0 27 46 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 29 - A - - - ML 174 173 3 176 3 1 1 27 46 -7.522 -0.028 -6.176 1.443 -1.515 -1.230 -0.986 D 175 173 3 176 3 0 0 25 44 -7.853 -3.366 -0.154 IL 176 176 3 176 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 30 - U - - - ML 177 176 3 179 3 1 1 26 45 -7.522 -0.028 -6.176 -0.724 -0.869 -1.403 1.304 D 178 176 3 179 3 0 0 25 44 -7.853 -0.350 -2.245 IL 179 179 3 179 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 31 - u - - - ML 180 179 3 182 3 1 1 25 43 -7.927 -0.021 -6.581 -0.675 0.433 -1.449 0.729 D 181 179 3 182 3 0 0 23 43 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 32 - C - - - ML 183 182 3 185 3 1 1 23 42 -7.927 -0.021 -6.581 -1.650 1.599 -2.471 -1.083 D 184 182 3 185 3 0 0 22 41 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 33 - a - - - ML 186 185 3 188 3 1 1 22 41 -7.927 -0.021 -6.581 0.561 -0.831 -1.032 0.559 D 187 185 3 188 3 0 0 21 40 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 34 - a - - - ML 189 188 3 191 3 1 1 21 40 -7.927 -0.021 -6.581 0.712 -1.361 0.472 -0.773 D 190 188 3 191 3 0 0 20 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 35 - C - - - ML 192 191 3 194 3 1 1 20 39 -7.927 -0.021 -6.581 -1.650 1.599 -2.471 -1.083 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 36 - u - - - ML 195 194 3 197 3 1 1 19 37 -7.927 -0.433 -1.972 -0.675 0.433 -1.449 0.729 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 37 - U - - - ML 198 197 3 200 3 1 1 18 36 -7.522 -0.028 -6.176 -0.724 -0.869 -1.403 1.304 D 199 197 3 200 3 0 0 17 35 -7.853 -0.350 -2.245 IL 200 200 3 200 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 38 - C - - - ML 201 200 3 203 3 1 1 16 35 -7.927 -0.021 -6.581 -1.650 1.599 -2.471 -1.083 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 39 - u - - - ML 204 203 3 206 3 1 1 15 33 -7.927 -0.021 -6.581 0.534 -0.826 -1.035 0.586 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 40 - a - - - ML 207 206 3 209 3 1 1 13 32 -7.927 -0.021 -6.581 0.686 -1.366 0.505 -0.776 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 41 - U - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 -1.417 -1.425 -2.147 1.598 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 56 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB8Cs4H2 ACC RF01551 DESC Trypanosomatid snoRNA TB8Cs4H2 LENG 70 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:27 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 2 EFFN 1.550781 CKSUM 2378764388 STATS LOCAL MSV -8.2820 0.72944 STATS LOCAL VITERBI -9.6947 0.72944 STATS LOCAL FORWARD -2.8848 0.72944 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.34771 1.25634 1.36816 1.60497 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.24649 2.81974 2.58578 2.48289 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.96868 1.25569 2.08757 1.55330 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.96868 1.25569 2.08757 1.55330 3 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.78006 0.36869 2.50029 1.80628 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.31979 2.79561 0.25314 2.74463 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.55855 2.30444 1.49974 2.25416 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 1.86063 2.41308 0.42502 2.29133 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.32065 2.79642 0.25287 2.74582 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.32042 2.79620 0.25295 2.74551 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.96868 1.25569 2.08757 1.55330 10 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.34273 0.33947 2.90340 1.98812 11 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.24649 2.81974 2.58578 2.48289 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.22572 2.25748 2.72325 0.32610 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.34273 0.33947 2.90340 1.98812 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.25710 3.06535 0.25196 2.63903 15 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.54234 1.60236 2.24006 0.48867 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.78379 0.36805 2.50177 1.80683 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.32043 2.79621 0.25294 2.74552 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.32065 2.79642 0.25287 2.74583 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.92709 2.26706 1.06602 1.85595 20 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.56087 1.29121 1.19169 1.55399 21 g - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 1.86428 2.41507 0.42365 2.29283 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.33192 1.35229 3.73767 0.17492 1.82963 1.09861 0.40547 23 2.75181 0.37364 2.48896 1.80203 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.40962 0.88175 2.16175 0.96503 25 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.77550 0.36948 2.49847 1.80560 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.04026 1.03740 1.80528 1.04639 27 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.25710 3.06535 0.25196 2.63903 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.33192 3.73767 1.35229 1.46634 0.26236 1.09861 0.40547 28 0.43372 2.34153 2.15240 1.96956 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06425 3.47000 3.47000 1.46634 0.26236 2.55437 0.08093 29 1.80589 1.92602 2.26787 0.53373 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06425 3.47000 3.47000 1.46634 0.26236 0.16899 1.86122 30 1.79297 1.11670 2.32107 0.89647 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.34273 0.33947 2.90340 1.98812 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 1.01009 1.92651 2.06139 1.01368 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.91001 2.26431 1.08781 1.85391 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.34273 0.33947 2.90340 1.98812 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.79297 1.11670 2.32107 0.89647 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.33192 3.73767 1.35229 1.46634 0.26236 1.09861 0.40547 36 1.80589 1.92602 2.26787 0.53373 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06425 3.47000 3.47000 1.46634 0.26236 0.16899 1.86122 37 2.34273 0.33947 2.90340 1.98812 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 1.02787 1.92338 2.06345 0.99668 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.92709 2.26706 1.06602 1.85595 40 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.22572 2.25748 2.72325 0.32610 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 1.70709 1.36349 0.90580 1.84121 42 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.07879 2.66677 0.31939 2.54017 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 1.75936 2.32524 0.48132 2.18821 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.07869 2.66666 0.31944 2.54002 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.34273 0.33947 2.90340 1.98812 46 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.52829 0.70733 2.23187 1.13970 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.91001 2.26431 1.08781 1.85391 48 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.96867 1.25569 2.08757 1.55330 49 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 1.01009 1.92651 2.06139 1.01368 50 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.96671 0.29497 2.62632 2.02776 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.96827 0.29475 2.62691 2.02806 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.08181 2.67013 0.31806 2.54474 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.55542 2.41903 1.43865 2.30347 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.24649 2.81974 2.58578 2.48289 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 0.24649 2.81974 2.58578 2.48289 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.34273 0.33947 2.90340 1.98812 57 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 0.24649 2.81974 2.58578 2.48289 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.24649 2.81974 2.58578 2.48289 59 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.34273 0.33947 2.90340 1.98812 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 0.24649 2.81974 2.58578 2.48289 61 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.96449 0.29528 2.62546 2.02733 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.96560 0.29513 2.62589 2.02754 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.52094 0.72055 2.22690 1.12311 64 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.48792 1.74795 2.12132 0.47335 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 2.97045 0.29444 2.62775 2.02849 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 2.08258 2.67099 0.31772 2.54591 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 0.96868 1.25569 2.08757 1.55330 68 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 68 0.24649 2.81974 2.58578 2.48289 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 69 2.25710 3.06535 0.25196 2.63903 70 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 70 0.24649 2.81974 2.58578 2.48289 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //