INFERNAL1/a [1.1.5 | Sep 2023] NAME TB8Cs3H1 ACC RF01550 DESC Trypanosomatid snoRNA TB8Cs3H1 STATES 193 NODES 49 CLEN 63 W 78 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 23:26:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01550/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 2.307129 CKSUM 292926218 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.20 NC 43.40 EFP7GF -9.7463 0.71915 ECMLC 0.67189 -5.60494 2.85497 1600000 352984 0.003400 ECMGC 0.46327 -16.56324 -4.17071 1600000 124554 0.003211 ECMLI 0.65631 -4.56504 3.79440 1600000 289650 0.004143 ECMGI 0.48756 -12.59856 -1.55022 1600000 87392 0.004577 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 78 98 -7.095 -7.302 -0.048 -5.716 IL 1 1 2 1 4 1 19 82 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 19 78 98 -8.483 -0.017 -6.801 1.772 -2.650 -2.254 -2.220 D 4 2 3 5 3 0 14 77 97 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 17 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 63 - c - - MR 6 5 3 8 3 1 18 77 97 -8.483 -0.017 -6.801 -0.456 0.444 -0.738 0.391 D 7 5 3 8 3 0 12 76 95 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 17 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 62 - g - - MR 9 8 3 11 3 1 17 76 96 -8.483 -0.017 -6.801 -0.323 -0.023 0.275 0.010 D 10 8 3 11 3 0 11 75 94 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 16 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 61 - a - - MR 12 11 3 14 3 1 16 75 95 -8.483 -0.017 -6.801 0.346 -0.959 0.206 0.085 D 13 11 3 14 3 0 10 74 93 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 15 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 60 - A - - MR 15 14 3 17 3 1 16 74 94 -8.483 -0.017 -6.801 1.772 -2.650 -2.254 -2.220 D 16 14 3 17 3 0 9 73 92 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 14 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 59 - G - - MR 18 17 3 20 3 1 15 73 93 -8.483 -0.017 -6.801 -1.871 -3.134 1.782 -2.522 D 19 17 3 20 3 0 8 72 91 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 14 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 58 - A - - MR 21 20 3 23 3 1 15 72 92 -8.483 -0.017 -6.801 1.772 -2.650 -2.254 -2.220 D 22 20 3 23 3 0 7 71 90 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 13 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 57 - A - - MR 24 23 3 26 5 1 14 71 91 -7.214 -0.036 -7.029 -7.241 -8.133 1.772 -2.650 -2.254 -2.220 D 25 23 3 26 5 0 6 70 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 11 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 2 56 U A - - MP 27 26 3 31 6 2 15 70 90 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -4.520 -4.352 -4.321 -0.625 -3.195 -4.854 1.139 -3.913 -4.323 -0.415 -4.679 -2.240 3.465 -4.657 -0.863 -3.111 ML 28 26 3 31 6 1 8 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 6 1 8 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 3 31 6 0 3 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 10 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 10 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 3 55 G C - - MP 33 32 6 37 6 2 14 68 88 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -5.013 -3.224 -5.143 0.016 -5.614 -4.798 -0.911 -5.401 -4.501 3.697 -4.819 -0.935 -1.289 -4.644 -2.964 -4.015 ML 34 32 6 37 6 1 7 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 7 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 3 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 9 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 9 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 4 54 g c - - MP 39 38 6 43 6 2 13 66 86 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -3.276 -0.464 -3.289 1.494 -3.822 -4.003 0.431 -3.730 -3.434 2.845 -3.839 0.623 0.180 -3.297 -1.433 -2.296 ML 40 38 6 43 6 1 7 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 6 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 2 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 8 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 9 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 5 53 G C - - MP 45 44 6 49 6 2 11 64 84 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -5.013 -3.224 -5.143 0.016 -5.614 -4.798 -0.911 -5.401 -4.501 3.697 -4.819 -0.935 -1.289 -4.644 -2.964 -4.015 ML 46 44 6 49 6 1 6 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 5 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 2 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 8 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 8 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 52 G C - - MP 51 50 6 55 6 2 10 62 82 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -5.013 -3.224 -5.143 0.016 -5.614 -4.798 -0.911 -5.401 -4.501 3.697 -4.819 -0.935 -1.289 -4.644 -2.964 -4.015 ML 52 50 6 55 6 1 6 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 2 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 7 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 7 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 51 u g - - MP 57 56 6 61 4 2 8 60 80 -7.095 -7.302 -0.048 -5.716 -4.199 -4.232 -3.896 -0.547 -2.614 -4.294 2.122 -3.412 -3.949 -0.363 -4.235 -2.341 0.843 -4.254 2.887 -2.811 ML 58 56 6 61 4 1 5 61 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 3 60 80 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 1 59 79 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 6 62 82 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 8 - U - - - ML 63 62 6 65 3 1 7 58 77 -8.101 -0.019 -6.755 -0.332 -1.034 -1.493 1.240 D 64 62 6 65 3 0 1 57 76 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 9 - C - - - ML 66 65 3 68 3 1 6 57 76 -8.101 -0.019 -6.755 -2.078 1.704 -2.908 -1.424 D 67 65 3 68 3 0 0 56 75 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 10 - G - - - ML 69 68 3 71 3 1 5 56 75 -8.101 -0.019 -6.755 -1.871 -3.134 1.782 -2.522 D 70 68 3 71 3 0 0 54 74 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 11 - A - - - ML 72 71 3 74 3 1 5 55 74 -8.101 -0.019 -6.755 1.772 -2.650 -2.254 -2.220 D 73 71 3 74 3 0 0 53 73 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 3 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 12 - A - - - ML 75 74 3 77 3 1 4 54 73 -8.101 -0.019 -6.755 1.772 -2.650 -2.254 -2.220 D 76 74 3 77 3 0 0 52 72 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - U - - - ML 78 77 3 80 3 1 3 53 72 -8.483 -0.017 -6.801 -1.743 -1.695 -2.489 1.684 D 79 77 3 80 3 0 0 51 70 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 2 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 50 - C - - MR 81 80 3 83 3 1 3 52 71 -8.483 -0.017 -6.801 -2.078 1.704 -2.908 -1.424 D 82 80 3 83 3 0 0 50 69 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 49 - A - - MR 84 83 3 86 3 1 2 51 70 -8.483 -0.017 -6.801 1.772 -2.650 -2.254 -2.220 D 85 83 3 86 3 0 0 49 68 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 48 - A - - MR 87 86 3 89 3 1 2 50 69 -8.483 -0.017 -6.801 1.772 -2.650 -2.254 -2.220 D 88 86 3 89 3 0 0 48 67 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 47 - A - - MR 90 89 3 92 3 1 2 49 68 -8.483 -0.017 -6.801 1.772 -2.650 -2.254 -2.220 D 91 89 3 92 3 0 0 47 66 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 46 - G - - MR 93 92 3 95 3 1 1 48 67 -8.483 -0.017 -6.801 -1.871 -3.134 1.782 -2.522 D 94 92 3 95 3 0 0 46 65 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 45 - G - - MR 96 95 3 98 3 1 1 47 66 -8.483 -0.017 -6.801 -1.871 -3.134 1.782 -2.522 D 97 95 3 98 3 0 0 45 64 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 44 - G - - MR 99 98 3 101 5 1 1 46 65 -7.214 -0.036 -7.029 -7.241 -8.133 -1.871 -3.134 1.782 -2.522 D 100 98 3 101 5 0 0 44 63 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 14 43 G U - - MP 102 101 3 106 6 2 2 45 64 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -3.794 -2.512 -3.974 1.017 -4.835 -5.568 -0.408 -3.975 -3.593 1.115 -4.125 3.248 -0.761 -4.731 -2.350 -2.641 ML 103 101 3 106 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 15 42 C G - - MP 108 107 6 112 6 2 2 43 62 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -4.852 -4.784 -4.490 -0.990 -3.144 -4.861 3.634 -3.985 -4.550 -0.789 -4.777 -2.736 0.337 -4.900 -0.860 -3.380 ML 109 107 6 112 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 16 41 G C - - MP 114 113 6 118 6 2 2 40 60 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -4.313 -2.866 -4.348 0.565 -5.079 -4.642 -0.427 -4.728 -4.144 3.452 -4.511 0.519 -0.712 -4.179 -2.430 -3.243 ML 115 113 6 118 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 17 40 C G - - MP 120 119 6 124 6 2 2 38 58 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -4.852 -4.784 -4.490 -0.990 -3.144 -4.861 3.634 -3.985 -4.550 -0.789 -4.777 -2.736 0.337 -4.900 -0.860 -3.380 ML 121 119 6 124 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 18 39 c g - - MP 126 125 6 130 4 2 2 36 56 -7.000 -8.245 -0.073 -4.699 -2.929 -2.962 -2.994 0.512 -2.370 -3.738 2.278 -0.195 -3.012 0.654 -3.508 -1.152 2.236 -3.179 -0.165 -2.009 ML 127 125 6 130 4 1 1 36 55 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 36 55 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 34 53 -12.737 -14.007 -2.036 -0.404 IL 130 130 5 130 4 1 1 36 55 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 38 - U - - MR 132 131 6 134 5 1 1 34 54 -7.214 -0.036 -7.029 -7.241 -8.133 -0.752 -1.041 -0.862 1.245 D 133 131 6 134 5 0 0 33 52 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 19 37 g c - - MP 135 134 3 139 6 2 2 33 53 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -2.120 -2.151 -2.275 1.037 -0.790 -3.103 1.541 -2.531 -2.342 1.923 -2.887 -0.503 1.270 -2.403 0.385 -0.372 ML 136 134 3 139 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 20 36 G C - - MP 141 140 6 145 4 2 2 31 51 -7.095 -7.302 -0.048 -5.716 -5.013 -3.224 -5.143 0.016 -5.614 -4.798 -0.911 -5.401 -4.501 3.697 -4.819 -0.935 -1.289 -4.644 -2.964 -4.015 ML 142 140 6 145 4 1 1 32 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 21 - u - - - ML 147 146 6 149 3 1 1 29 48 -8.483 -0.017 -6.801 0.048 -0.498 -0.126 0.424 D 148 146 6 149 3 0 0 28 47 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 35 - C - - MR 150 149 3 152 5 1 1 28 47 -7.214 -0.036 -7.029 -7.241 -8.133 -0.344 1.143 -1.675 -0.533 D 151 149 3 152 5 0 0 27 45 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 22 34 c g - - MP 153 152 3 157 6 2 2 27 46 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -3.724 -3.682 -3.617 0.068 -2.565 -4.204 2.919 -3.273 -3.622 0.277 -4.022 -1.671 1.679 -3.873 0.775 -2.496 ML 154 152 3 157 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 23 33 g c - - MP 159 158 6 163 6 2 2 25 44 -9.165 -9.105 -0.020 -7.881 -8.161 -8.556 -3.621 -2.500 -3.637 1.470 -4.296 -4.449 0.173 -3.995 -3.666 2.875 -4.096 1.410 -0.096 -3.726 -1.773 -2.542 ML 160 158 6 163 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 24 32 a u - - MP 165 164 6 169 4 2 2 23 42 -7.095 -7.302 -0.048 -5.716 -3.401 -2.458 -3.467 2.580 -3.997 -4.548 0.285 -3.733 -3.444 2.189 -3.951 0.943 0.026 -3.727 -1.617 -2.361 ML 166 164 6 169 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 25 - a - - - ML 171 170 6 173 3 1 1 20 39 -8.101 -0.019 -6.755 0.358 -0.433 -0.513 0.352 D 172 170 6 173 3 0 0 19 38 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 26 - a - - - ML 174 173 3 176 3 1 1 19 37 -8.101 -0.019 -6.755 0.651 -1.008 -0.018 -0.082 D 175 173 3 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 27 - c - - - ML 177 176 3 179 3 1 1 17 36 -8.101 -0.019 -6.755 -0.172 0.718 -1.343 0.102 D 178 176 3 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 28 - u - - - ML 180 179 3 182 3 1 1 16 35 -8.101 -0.019 -6.755 -0.825 0.594 -1.622 0.680 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 29 - g - - - ML 183 182 3 185 3 1 1 15 33 -8.101 -0.019 -6.755 -0.530 -1.217 0.840 0.121 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 30 - G - - - ML 186 185 3 188 3 1 1 13 31 -8.101 -0.019 -6.755 -1.871 -3.134 1.782 -2.522 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 31 - U - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -1.034 -0.452 -1.782 1.316 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB8Cs3H1 ACC RF01550 DESC Trypanosomatid snoRNA TB8Cs3H1 LENG 63 MAXL 144 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 23:26:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01550/CM NSEQ 7 EFFN 3.250488 CKSUM 292926218 STATS LOCAL MSV -8.1343 0.71915 STATS LOCAL VITERBI -8.6212 0.71915 STATS LOCAL FORWARD -3.6287 0.71915 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.41986 1.42486 1.15448 1.59708 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 0.00000 * 1 0.10172 3.63281 3.32023 3.37759 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 2 3.44877 2.27106 3.24700 0.19101 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 3 2.84373 3.63177 0.11970 3.57057 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 4 1.41510 2.49052 0.54996 2.33041 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 5 2.84261 3.63024 0.11989 3.56848 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 6 2.84187 3.62923 0.12001 3.56711 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 7 3.25465 1.31717 3.08377 0.43429 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 8 1.69915 2.27665 2.61922 0.44368 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 9 3.31985 0.12668 3.88684 2.77552 9 C - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 10 3.09315 4.01884 0.09537 3.58874 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 11 0.10172 3.63281 3.32023 3.37759 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 12 0.10172 3.63281 3.32023 3.37759 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 13 2.98533 2.88707 3.51522 0.14619 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 14 2.11048 3.28741 0.22630 3.12380 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 15 3.61174 0.15882 3.43191 2.43588 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 16 2.39984 3.20746 0.19543 3.07205 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 17 3.60915 0.15900 3.43054 2.43540 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 18 2.34164 0.92989 2.15202 0.93399 18 c - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 19 1.81329 1.48225 1.14858 1.22870 19 g - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 20 2.83481 3.61956 0.12119 3.55398 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 21 1.37189 1.75642 1.44593 1.08416 21 u - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 22 2.68271 0.64876 2.45239 1.13059 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 23 1.64800 2.72554 0.40747 2.56755 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 24 0.80731 2.72021 0.89188 2.54851 24 a - - < 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 25 1.12475 1.70365 1.75331 1.13928 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 26 0.90661 2.17773 1.37457 1.47027 26 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 27 1.56342 0.80189 2.47174 1.35610 27 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 28 2.14495 0.89830 2.71943 0.89221 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 29 1.90468 2.39409 0.70679 1.32181 29 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 30 3.09315 4.01884 0.09537 3.58874 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 31 2.33634 1.74866 2.86224 0.39724 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 32 2.77886 1.25148 2.52332 0.55929 32 U - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 33 2.81339 0.72220 2.53428 0.98084 33 c - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 34 1.53706 2.62414 0.46792 2.45127 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 35 1.73035 0.47992 2.80971 1.93987 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 36 3.75327 0.14342 3.47601 2.53525 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 37 1.56654 1.24688 1.29398 1.47117 37 c - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 38 2.10544 2.28607 2.05471 0.43323 38 U - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 39 1.05176 2.32290 0.98913 1.71043 39 g - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 40 2.71717 3.59833 0.13652 3.37601 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 41 3.29700 0.30682 3.03002 1.72088 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 42 2.72116 3.60451 0.13576 3.38301 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 43 3.34093 2.23035 3.08489 0.20903 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 44 3.09315 4.01884 0.09537 3.58874 44 G - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 45 3.09315 4.01884 0.09537 3.58874 45 G - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 46 3.09315 4.01884 0.09537 3.58874 46 G - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 47 0.10172 3.63281 3.32023 3.37759 47 A - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 48 0.10172 3.63281 3.32023 3.37759 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 49 0.10172 3.63281 3.32023 3.37759 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 50 3.31985 0.12668 3.88684 2.77552 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 51 2.27242 3.23621 0.21282 3.00935 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 52 3.74882 0.14370 3.47388 2.53442 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 53 3.75293 0.14345 3.47584 2.53518 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 54 2.58240 0.63847 2.29727 1.21816 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 55 3.76615 0.14264 3.48212 2.53762 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 56 0.21553 3.44823 2.10869 3.20178 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 57 0.10172 3.63281 3.32023 3.37759 57 A - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 58 0.10172 3.63281 3.32023 3.37759 58 A - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 59 3.09315 4.01884 0.09537 3.58874 59 G - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 60 0.10172 3.63281 3.32023 3.37759 60 A - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 61 1.14424 2.14005 1.19822 1.33882 61 a - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 62 1.70920 1.36580 1.12588 1.42943 62 g - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10524 4.10524 1.46634 0.26236 1.09861 0.40547 63 1.81214 1.00638 1.93011 1.12079 63 c - - : 1.38629 1.38629 1.38629 1.38629 0.01690 4.08862 * 1.46634 0.26236 0.00000 * //