INFERNAL1/a [1.1.4 | Dec 2020] NAME TB8Cs2H1 ACC RF01549 DESC Trypanosomatid snoRNA TB8Cs2H1 STATES 199 NODES 49 CLEN 65 W 79 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:22 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 3.670898 CKSUM 10972746 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 41.20 NC 33.60 EFP7GF -11.2353 0.71912 ECMLC 0.59601 -7.45008 2.58083 1600000 473852 0.002532 ECMGC 0.41669 -17.62447 -3.76795 1600000 128719 0.003108 ECMLI 0.60881 -5.90714 3.57237 1600000 385127 0.003116 ECMGI 0.45536 -12.93730 -1.02605 1600000 90703 0.004410 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 79 99 -7.528 -7.735 -0.035 -6.149 IL 1 1 2 1 4 1 17 84 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 83 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 16 79 99 -8.870 -0.013 -7.188 1.381 -2.070 -0.280 -1.583 D 4 2 3 5 3 0 10 78 97 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 15 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - A - - MR 6 5 3 8 3 1 16 78 98 -8.870 -0.013 -7.188 1.875 -3.463 -2.994 -3.117 D 7 5 3 8 3 0 8 77 96 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 14 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - G - - MR 9 8 3 11 3 1 15 77 97 -8.870 -0.013 -7.188 -2.675 -4.032 1.883 -3.403 D 10 8 3 11 3 0 7 76 95 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 13 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - A - - MR 12 11 3 14 3 1 15 76 96 -8.870 -0.013 -7.188 1.875 -3.463 -2.994 -3.117 D 13 11 3 14 3 0 6 75 94 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 12 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - A - - MR 15 14 3 17 5 1 14 75 95 -7.580 -0.028 -7.395 -7.607 -8.499 1.156 -1.964 0.196 -1.433 D 16 14 3 17 5 0 6 74 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 10 76 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 63 C G - - MP 18 17 3 22 6 2 15 74 94 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -5.766 -5.774 -5.235 -1.943 -3.741 -5.485 3.802 -4.676 -5.354 -1.825 -5.454 -3.770 -0.385 -5.749 -1.506 -4.164 ML 19 17 3 22 6 1 8 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 7 73 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 4 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 9 74 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 9 74 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 62 C G - - MP 24 23 6 28 6 2 14 72 92 -3.702 -9.296 -0.132 -8.073 -8.352 -8.747 -4.030 -4.049 0.857 -0.488 -2.961 -4.500 3.280 -3.664 -3.965 -0.350 -4.350 -2.184 0.559 -4.206 -0.714 -2.901 ML 25 23 6 28 6 1 7 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 7 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 4 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 10 71 91 -3.489 -3.752 -0.355 -5.407 -6.184 -5.844 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 9 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 61 U A - - MP 30 29 6 34 6 2 13 70 89 -9.357 -4.026 -0.108 -8.073 -8.352 -8.747 -5.644 -5.486 -5.309 -1.711 -3.992 -5.735 0.341 -4.771 -5.305 -1.612 -5.607 -3.349 3.740 -5.717 -1.634 -3.916 ML 31 29 6 34 6 1 7 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 7 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 3 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 8 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 9 69 88 -2.918 -0.330 -6.429 -4.597 -5.702 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 59 c g - - MP 36 35 6 40 6 2 12 68 87 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -2.275 -2.285 -2.457 0.811 -2.216 -3.241 2.187 -2.635 -0.331 0.868 -2.990 0.366 1.249 -2.587 0.769 -1.589 ML 37 35 6 40 6 1 6 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 6 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 3 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 8 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 8 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 58 C G - - MP 42 41 6 46 6 2 11 66 85 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -5.766 -5.774 -5.235 -1.943 -3.741 -5.485 3.802 -4.676 -5.354 -1.825 -5.454 -3.770 -0.385 -5.749 -1.506 -4.164 ML 43 41 6 46 6 1 6 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 6 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 3 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 7 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 7 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 57 g u - - MP 48 47 6 52 6 2 9 64 83 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -4.141 -2.879 -4.314 2.379 -5.608 -6.237 -1.178 -4.401 -3.973 0.722 -4.557 2.928 -1.342 -5.127 -3.074 -2.992 ML 49 47 6 52 6 1 6 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 5 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 2 62 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 7 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 6 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 56 C G - - MP 54 53 6 58 4 2 7 62 81 -7.528 -7.735 -0.035 -6.149 -5.766 -5.774 -5.235 -1.943 -3.741 -5.485 3.802 -4.676 -5.354 -1.825 -5.454 -3.770 -0.385 -5.749 -1.506 -4.164 ML 55 53 6 58 4 1 5 63 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 3 62 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 2 61 81 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 6 64 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 5 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 10 - U - - - ML 60 59 6 62 3 1 6 60 79 -8.509 -0.014 -7.164 -0.222 -1.298 -1.731 1.284 D 61 59 6 62 3 0 2 58 78 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 5 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 11 - U - - - ML 63 62 3 65 3 1 5 59 78 -8.509 -0.014 -7.164 -2.523 -2.347 -3.292 1.819 D 64 62 3 65 3 0 1 57 77 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 5 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 12 - C - - - ML 66 65 3 68 3 1 4 57 76 -8.509 -0.014 -7.164 -3.049 1.846 -3.851 -2.223 D 67 65 3 68 3 0 1 56 75 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 4 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 13 - G - - - ML 69 68 3 71 3 1 3 56 75 -8.509 -0.250 -2.678 -2.675 -4.032 1.883 -3.403 D 70 68 3 71 3 0 0 55 74 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 59 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - C - - - ML 72 71 3 74 3 1 4 55 74 -8.648 -0.015 -6.966 -2.506 1.779 -3.334 -1.770 D 73 71 3 74 3 0 0 54 73 -6.775 -0.285 -2.558 IL 74 74 3 74 3 1 2 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 55 - G - - MR 75 74 3 77 3 1 3 54 73 -8.870 -0.013 -7.188 -2.675 -4.032 1.883 -3.403 D 76 74 3 77 3 0 0 53 72 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 2 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 54 - U - - MR 78 77 3 80 3 1 3 53 72 -8.870 -0.013 -7.188 -1.513 -0.555 -2.274 1.466 D 79 77 3 80 3 0 0 52 71 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 53 - A - - MR 81 80 3 83 3 1 3 52 71 -8.870 -0.013 -7.188 1.381 -2.070 -0.280 -1.583 D 82 80 3 83 3 0 0 51 70 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 52 - G - - MR 84 83 3 86 3 1 2 51 70 -8.870 -0.013 -7.188 -0.488 -2.540 1.518 -1.997 D 85 83 3 86 3 0 0 50 69 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 51 - G - - MR 87 86 3 89 3 1 2 50 69 -8.870 -0.013 -7.188 -2.675 -4.032 1.883 -3.403 D 88 86 3 89 3 0 0 49 68 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 50 - U - - MR 90 89 3 92 5 1 1 49 68 -7.580 -0.028 -7.395 -7.607 -8.499 -2.523 -2.347 -3.292 1.819 D 91 89 3 92 5 0 0 48 67 -5.352 -0.707 -2.978 -4.409 -2.404 IR 92 92 3 92 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 15 49 U A - - MP 93 92 3 97 6 2 2 48 67 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -4.313 -4.316 -4.125 -0.575 -2.957 -4.631 1.379 -3.710 -4.145 -0.418 -4.499 -2.346 3.102 -4.429 1.334 -3.004 ML 94 92 3 97 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 3 97 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 3 97 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 48 C G - - MP 99 98 6 103 6 2 2 46 65 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -5.766 -5.774 -5.235 -1.943 -3.741 -5.485 3.802 -4.676 -5.354 -1.825 -5.454 -3.770 -0.385 -5.749 -1.506 -4.164 ML 100 98 6 103 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 17 47 G C - - MP 105 104 6 109 6 2 2 44 63 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -4.726 -3.128 -4.760 0.284 -5.746 -4.938 -0.941 -5.184 -4.487 3.499 -4.834 0.944 -1.206 -4.524 -2.962 -3.637 ML 106 104 6 109 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 18 46 u a - - MP 111 110 6 115 6 2 2 42 61 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -3.254 -3.284 -3.291 0.094 -2.674 -3.997 1.385 -3.250 -3.331 0.259 -3.802 -1.520 2.700 1.365 -0.513 -2.349 ML 112 110 6 115 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 39 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 19 45 c g - - MP 117 116 6 121 6 2 2 40 59 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -2.846 -2.643 -2.990 0.665 -2.616 -3.750 2.481 -3.048 -2.962 0.927 -3.456 0.919 1.082 -3.130 -0.439 0.094 ML 118 116 6 121 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 20 44 g c - - MP 123 122 6 127 4 2 2 38 57 -7.405 -8.650 -0.296 -2.496 -2.438 -1.922 -2.682 0.907 -2.622 -3.240 1.188 -0.230 -2.575 1.735 -2.972 1.521 0.881 -2.719 0.417 -1.745 ML 124 122 6 127 4 1 1 38 57 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 38 56 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 35 54 -12.737 -14.007 -2.036 -0.404 IL 127 127 5 127 4 1 1 38 57 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 43 - u - - MR 129 128 6 131 3 1 1 36 55 -8.648 -0.222 -2.838 -0.440 0.057 -0.431 0.566 D 130 128 6 131 3 0 0 34 53 -7.821 -2.999 -0.200 IR 131 131 3 131 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 42 - a - - MR 132 131 3 134 3 1 1 36 55 -8.444 -0.018 -6.762 0.730 -1.481 0.533 -0.897 D 133 131 3 134 3 0 0 34 53 -8.406 -3.583 -0.130 IR 134 134 3 134 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 41 - u - - MR 135 134 3 137 5 1 1 35 54 -7.177 -0.037 -6.992 -7.205 -8.096 -0.785 0.369 -1.564 0.840 D 136 134 3 137 5 0 0 33 52 -6.788 -0.223 -4.414 -5.845 -3.840 IR 137 137 3 137 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 21 40 C G - - MP 138 137 3 142 6 2 2 34 53 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 0.365 -3.650 -3.642 -0.115 -2.826 -4.301 3.217 -3.464 -3.659 0.017 -4.098 -1.766 0.772 -3.880 -0.586 -2.619 ML 139 137 3 142 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 22 39 g c - - MP 144 143 6 148 6 2 2 32 51 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -3.395 1.378 -3.523 1.969 -4.101 -4.322 0.018 -3.834 -3.471 2.149 -3.886 1.075 -0.217 -3.652 -1.795 -2.460 ML 145 143 6 148 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 23 38 c g - - MP 150 149 6 154 6 2 2 30 49 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -3.472 -3.414 -3.497 1.361 -2.715 -4.228 2.627 -3.323 -3.490 0.473 -3.970 -1.420 1.092 -3.692 1.242 -2.411 ML 151 149 6 154 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 24 37 u a - - MP 156 155 6 160 6 2 2 28 47 -9.357 -9.296 -0.018 -8.073 -8.352 -8.747 -3.360 -3.373 0.822 0.041 -2.731 -4.094 1.360 -3.313 -3.416 0.149 -3.884 -1.561 2.921 -3.612 -0.553 -2.424 ML 157 155 6 160 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 25 36 C G - - MP 162 161 6 166 4 2 2 26 44 -7.528 -7.735 -0.035 -6.149 -4.030 -4.049 0.857 -0.488 -2.961 -4.500 3.280 -3.664 -3.965 -0.350 -4.350 -2.184 0.559 -4.206 -0.714 -2.901 ML 163 161 6 166 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 26 - u - - - ML 168 167 6 170 3 1 1 23 42 -8.509 -0.014 -7.164 -0.492 -0.445 0.131 0.545 D 169 167 6 170 3 0 0 22 41 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 27 - c - - - ML 171 170 3 173 3 1 1 22 41 -8.509 -0.014 -7.164 -1.224 0.827 -2.074 0.642 D 172 170 3 173 3 0 0 21 40 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 28 - u - - - ML 174 173 3 176 3 1 1 21 39 -8.509 -0.506 -1.771 0.111 -0.139 -0.468 0.366 D 175 173 3 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 29 - u - - - ML 177 176 3 179 3 1 1 20 38 -8.024 -0.020 -6.678 -0.417 -0.923 0.055 0.753 D 178 176 3 179 3 0 0 18 36 -8.455 -3.968 -0.100 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 30 - c - - - ML 180 179 3 182 3 1 1 19 37 -8.024 -0.020 -6.678 -0.490 0.714 -0.220 -0.341 D 181 179 3 182 3 0 0 17 35 -8.455 -3.968 -0.100 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 31 - u - - - ML 183 182 3 185 3 1 1 17 36 -8.024 -0.020 -6.678 -0.275 -0.143 0.004 0.339 D 184 182 3 185 3 0 0 16 35 -8.455 -0.221 -2.846 IL 185 185 3 185 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 32 - C - - - ML 186 185 3 188 3 1 1 16 34 -8.509 -0.014 -7.164 -1.730 1.448 -2.616 -0.309 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 33 - a - - - ML 189 188 3 191 3 1 1 14 33 -8.509 -0.014 -7.164 0.618 -0.470 -0.430 0.001 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 34 - G - - - ML 192 191 3 194 3 1 1 13 31 -8.509 -0.014 -7.164 -0.408 -2.491 1.490 -1.947 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 35 - U - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -1.398 -0.269 -2.170 1.361 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB8Cs2H1 ACC RF01549 DESC Trypanosomatid snoRNA TB8Cs2H1 LENG 65 MAXL 141 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:22 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 6 EFFN 5.364258 CKSUM 10972746 STATS LOCAL MSV -7.7831 0.71912 STATS LOCAL VITERBI -8.8224 0.71912 STATS LOCAL FORWARD -3.4752 0.71912 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.59084 1.41113 1.15927 1.43270 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 0.00000 * 1 0.36735 3.17571 1.56195 2.88348 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 2 4.34275 0.07759 4.22788 3.05607 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 3 1.68772 0.40254 3.19439 2.24953 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.20768 1.74407 4.36402 0.13975 2.03699 1.09861 0.40547 4 4.28212 3.02020 4.18669 0.08099 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 5 2.07571 1.09205 1.35500 1.26919 6 c - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 6 4.28484 0.07958 4.19339 3.04445 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 7 1.05504 3.93223 0.50227 3.60953 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 8 4.29345 0.07927 4.19856 3.04621 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 9 1.59063 2.53539 2.85525 0.41638 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 10 3.61155 3.42189 4.15434 0.07835 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 11 4.03446 0.06376 4.53024 3.40239 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 12 3.68568 4.66909 0.05072 4.20017 13 G - - - 1.38629 1.38629 1.38629 1.38629 0.20768 4.36402 1.74407 1.46634 0.26236 1.09861 0.40547 13 3.68130 0.08956 4.22144 3.08350 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18719 4.18719 1.46634 0.26236 0.13594 2.06274 14 3.39057 1.99408 3.20554 0.23619 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 15 4.32685 0.07812 4.21849 3.05293 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 16 2.69793 3.63731 0.13259 3.48965 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 17 3.04446 1.98753 2.86042 0.27694 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 18 2.32654 0.86900 1.40208 1.44006 19 c - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 19 2.02384 1.60988 0.77429 1.57547 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 20 1.88935 0.39105 2.91153 2.13628 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 21 0.72160 3.01711 0.90237 2.82223 22 a - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 22 1.68916 0.84183 2.39752 1.22601 23 c - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 23 1.64081 2.01205 2.86659 0.48521 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 24 1.68595 0.40424 3.18408 2.24589 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 25 1.86035 1.71114 1.23663 0.98521 26 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 26 2.52661 0.73356 3.14884 0.92389 27 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 27 1.32184 1.46742 1.71223 1.13205 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.40929 4.36402 1.12964 1.46634 0.26236 1.09861 0.40547 28 1.80262 2.15752 1.30591 0.80163 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03761 3.99234 3.99234 1.46634 0.26236 3.31020 0.03719 29 1.90991 0.76614 1.52248 1.77826 30 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03761 3.99234 3.99234 1.46634 0.26236 3.31020 0.03719 30 1.66326 1.46059 1.33273 1.15638 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03761 3.99234 3.99234 1.46634 0.26236 0.07582 2.61705 31 2.94301 0.30829 3.58309 1.68848 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 32 0.92929 1.72297 1.69387 1.41543 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 33 1.73910 3.43504 0.29269 3.08256 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 34 2.68652 1.58611 3.23026 0.37453 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 35 2.52695 3.35301 0.17340 3.11645 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 36 0.52907 3.05845 1.19343 2.80167 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 37 2.06883 2.57344 0.51973 1.59598 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 38 3.05935 0.75699 2.82474 0.85641 39 c - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 39 1.63430 3.11048 0.35051 2.88234 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.38005 4.36402 1.19256 1.46634 0.26236 1.09861 0.40547 40 2.12950 1.06411 2.69016 0.75886 41 u - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02052 4.02052 1.46634 0.26236 3.25201 0.03946 41 0.83351 2.63786 0.94666 2.24499 42 a - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02052 4.02052 1.46634 0.26236 0.84441 0.56179 42 1.80658 1.30270 1.67484 0.97644 43 u - - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18719 4.18719 1.46634 0.26236 0.13594 2.06274 43 2.15847 1.44081 1.50678 0.85299 44 u - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 44 2.05105 2.26281 0.79933 1.14661 45 g - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 45 0.67498 1.31113 1.82300 2.81707 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 46 3.70489 0.28844 3.46295 1.63667 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 47 3.34054 4.38919 0.06610 4.12695 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 48 0.48880 3.37482 1.17180 3.15586 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 49 3.61155 3.42189 4.15434 0.07835 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 50 3.68568 4.66909 0.05072 4.20017 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 51 1.80285 3.47158 0.27459 3.11864 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 52 0.36735 3.17571 1.56195 2.88348 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 53 2.77878 1.82097 3.31096 0.30173 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 54 3.68568 4.66909 0.05072 4.20017 55 G - - - 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 55 3.31813 4.34968 0.06824 4.08445 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 56 3.77158 2.57411 3.69397 0.13251 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 57 3.31003 4.33556 0.06903 4.06930 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 58 1.51392 2.11004 0.80446 1.55405 59 g - - > 1.38629 1.38629 1.38629 1.38629 0.16734 1.95641 4.36402 0.17125 1.84903 1.09861 0.40547 59 0.09173 4.39639 2.85222 4.03899 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 60 2.53596 3.36632 0.17121 3.13140 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 61 3.34960 4.40538 0.06525 4.14439 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 62 0.52194 3.10900 1.20479 2.77690 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 63 0.05225 4.27407 3.91609 4.07101 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 64 3.68568 4.66909 0.05072 4.20017 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.02578 4.36402 4.36402 1.46634 0.26236 1.09861 0.40547 65 0.05225 4.27407 3.91609 4.07101 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.01298 4.35121 * 1.46634 0.26236 0.00000 * //