INFERNAL1/a [1.1.5 | Sep 2023] NAME TB6Cs1H3 ACC RF01547 DESC Trypanosomatid snoRNA TB6Cs1H3 STATES 196 NODES 49 CLEN 64 W 85 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 13:28:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01547/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.133789 CKSUM 3672703403 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 43.80 NC 38.60 EFP7GF -9.5913 0.71914 ECMLC 0.62068 -6.87495 2.91991 1600000 524152 0.002289 ECMGC 0.41489 -17.65333 -3.68915 1600000 131280 0.003047 ECMLI 0.62061 -5.20313 4.11497 1600000 389649 0.003080 ECMGI 0.44726 -12.84610 -0.76633 1600000 88812 0.004504 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 112 -7.029 -7.236 -0.050 -5.650 IL 1 1 2 1 4 1 18 88 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 88 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 85 113 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 4 2 3 5 3 0 11 84 111 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 16 86 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - A - - MR 6 5 3 8 3 1 16 84 112 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 7 5 3 8 3 0 9 83 110 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 85 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - G - - MR 9 8 3 11 3 1 16 83 111 -8.426 -0.018 -6.743 -1.742 -2.987 1.758 -2.374 D 10 8 3 11 3 0 8 82 109 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 84 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - A - - MR 12 11 3 14 3 1 15 82 110 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 13 11 3 14 3 0 7 81 108 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 83 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - G - - MR 15 14 3 17 5 1 15 81 109 -7.160 -0.037 -6.975 -7.187 -8.079 -0.140 -1.847 1.261 -1.259 D 16 14 3 17 5 0 6 80 107 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 11 82 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 63 C G - - MP 18 17 3 22 6 2 16 80 108 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 19 17 3 22 6 1 8 79 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 8 79 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 4 76 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 10 80 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 10 80 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 62 C G - - MP 24 23 6 28 6 2 15 78 106 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 25 23 6 28 6 1 8 77 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 8 77 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 4 74 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 9 78 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 10 78 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 61 g c - - MP 30 29 6 34 6 2 14 76 104 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.363 -2.391 -3.426 2.076 -3.964 -4.421 0.341 -3.711 -3.414 2.357 -3.897 1.582 0.078 -3.636 -1.565 -2.327 ML 31 29 6 34 6 1 7 75 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 7 75 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 3 72 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 9 76 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 9 76 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 60 c g - - MP 36 35 6 40 6 2 13 74 102 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -2.391 -2.127 -2.580 0.929 -2.327 -3.265 2.061 -0.304 -2.531 1.218 -2.995 0.938 1.237 -2.682 -0.234 -1.645 ML 37 35 6 40 6 1 7 73 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 7 73 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 3 70 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 8 74 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 9 74 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 59 G C - - MP 42 41 6 46 6 2 11 72 100 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.890 -2.640 -3.923 0.866 -4.603 -4.562 -0.070 -4.261 -3.836 3.147 -4.252 1.369 -0.350 -3.946 -2.040 -2.809 ML 43 41 6 46 6 1 7 71 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 6 71 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 3 68 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 8 72 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 8 72 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 58 G C - - MP 48 47 6 52 6 2 10 70 98 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.723 -2.590 -3.736 1.864 -4.262 -4.466 0.229 -4.058 -3.728 3.042 -4.156 -0.211 -0.075 -3.795 -1.742 -2.637 ML 49 47 6 52 6 1 6 69 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 5 69 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 2 67 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 7 70 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 7 70 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 57 G C - - MP 54 53 6 58 4 2 8 68 96 -7.029 -7.236 -0.050 -5.650 -4.894 -3.167 -5.009 0.098 -5.447 -4.753 -0.773 -5.261 -4.426 3.673 -4.752 -0.872 -1.155 -4.567 -2.819 -3.883 ML 55 53 6 58 4 1 5 68 95 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 3 67 94 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 2 66 93 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 7 69 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 6 68 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - U - - - ML 60 59 6 62 3 1 7 66 93 -8.040 -0.020 -6.694 -1.627 -1.599 -2.368 1.656 D 61 59 6 62 3 0 2 64 92 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 6 67 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - u - - - ML 63 62 3 65 3 1 6 65 92 -8.040 -0.020 -6.694 0.318 -0.871 -1.147 0.812 D 64 62 3 65 3 0 1 63 91 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 5 66 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - G - - - ML 66 65 3 68 3 1 6 64 91 -8.040 -0.020 -6.694 -1.742 -2.987 1.758 -2.374 D 67 65 3 68 3 0 1 62 90 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 65 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - C - - - ML 69 68 3 71 3 1 5 63 90 -8.040 -0.020 -6.694 -1.927 1.671 -2.755 -1.303 D 70 68 3 71 3 0 0 61 89 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 64 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - A - - - ML 72 71 3 74 3 1 5 62 89 -8.040 -0.020 -6.694 1.750 -2.525 -2.142 -2.083 D 73 71 3 74 3 0 0 61 88 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 3 63 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - C - - - ML 75 74 3 77 3 1 4 61 88 -8.426 -0.018 -6.743 -1.927 1.671 -2.755 -1.303 D 76 74 3 77 3 0 0 60 87 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 2 62 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 56 - G - - MR 78 77 3 80 3 1 3 60 87 -8.426 -0.018 -6.743 -1.742 -2.987 1.758 -2.374 D 79 77 3 80 3 0 0 58 86 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 2 61 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 55 - U - - MR 81 80 3 83 3 1 3 59 86 -8.426 -0.018 -6.743 -1.627 -1.599 -2.368 1.656 D 82 80 3 83 3 0 0 57 85 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 60 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 54 - U - - MR 84 83 3 86 3 1 3 58 85 -8.426 -0.018 -6.743 -1.627 -1.599 -2.368 1.656 D 85 83 3 86 3 0 0 56 84 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 59 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 53 - C - - MR 87 86 3 89 3 1 2 57 84 -8.426 -0.018 -6.743 -1.927 1.671 -2.755 -1.303 D 88 86 3 89 3 0 0 55 83 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 58 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 52 - A - - MR 90 89 3 92 3 1 2 56 83 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 91 89 3 92 3 0 0 55 82 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 57 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 51 - G - - MR 93 92 3 95 5 1 1 55 82 -7.160 -0.037 -6.975 -7.187 -8.079 -1.742 -2.987 1.758 -2.374 D 94 92 3 95 5 0 0 54 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 56 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 15 50 C G - - MP 96 95 3 100 6 2 2 54 81 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 97 95 3 100 6 1 1 53 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 52 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 50 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 54 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 54 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 16 49 G C - - MP 102 101 6 106 6 2 2 52 79 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.894 -3.167 -5.009 0.098 -5.447 -4.753 -0.773 -5.261 -4.426 3.673 -4.752 -0.872 -1.155 -4.567 -2.819 -3.883 ML 103 101 6 106 6 1 1 51 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 50 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 48 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 52 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 52 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 17 48 u g - - MP 108 107 6 112 6 2 2 50 77 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.602 -3.596 -3.496 0.028 -2.502 -4.069 1.776 -3.203 -3.525 0.233 -3.918 -1.687 2.169 -3.759 2.190 -2.436 ML 109 107 6 112 6 1 1 49 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 49 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 46 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 50 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 50 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 18 47 U G - - MP 114 113 6 118 6 2 2 48 75 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.250 -4.177 -3.916 -0.496 -2.625 -4.314 1.665 -3.412 -3.958 -0.330 -4.233 -2.173 0.795 -4.320 3.101 -2.821 ML 115 113 6 118 6 1 1 47 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 47 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 45 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 48 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 48 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 19 46 G C - - MP 120 119 6 124 4 2 2 46 73 -7.029 -7.236 -0.050 -5.650 -3.890 -2.640 -3.923 0.866 -4.603 -4.562 -0.070 -4.261 -3.836 3.147 -4.252 1.369 -0.350 -3.946 -2.040 -2.809 ML 121 119 6 124 4 1 1 46 73 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 1 45 72 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 0 44 71 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 1 47 74 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 1 46 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 20 - C - - - ML 126 125 6 128 3 1 1 44 71 -8.040 -0.020 -6.694 -0.986 1.097 -1.808 0.098 D 127 125 6 128 3 0 0 43 70 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 45 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 21 - G - - - ML 129 128 3 131 3 1 1 43 70 -8.426 -0.018 -6.743 -1.742 -2.987 1.758 -2.374 D 130 128 3 131 3 0 0 42 69 -5.620 -0.734 -1.403 IL 131 131 3 131 3 1 1 44 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 45 - u - - MR 132 131 3 134 3 1 1 42 69 -8.426 -0.018 -6.743 0.141 -0.869 0.099 0.354 D 133 131 3 134 3 0 0 40 68 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 43 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 44 - a - - MR 135 134 3 137 3 1 1 41 68 -8.426 -0.018 -6.743 0.792 -0.941 -1.091 0.354 D 136 134 3 137 3 0 0 39 67 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 42 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 43 - u - - MR 138 137 3 140 5 1 1 40 67 -7.160 -0.037 -6.975 -7.187 -8.079 0.350 -0.212 -1.034 0.458 D 139 137 3 140 5 0 0 39 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 40 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 22 42 G C - - MP 141 140 3 145 6 2 2 39 66 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.894 -3.167 -5.009 0.098 -5.447 -4.753 -0.773 -5.261 -4.426 3.673 -4.752 -0.872 -1.155 -4.567 -2.819 -3.883 ML 142 140 3 145 6 1 1 38 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 37 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 35 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 39 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 38 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 23 41 g c - - MP 147 146 6 151 6 2 2 37 64 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -0.167 -2.193 -2.728 1.816 -2.888 -3.562 0.941 -3.065 -2.819 2.376 -3.320 -0.145 0.702 -2.835 -0.796 -1.823 ML 148 146 6 151 6 1 1 36 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 35 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 33 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 37 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 36 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 24 40 g c - - MP 153 152 6 157 6 2 2 35 62 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 0.675 -2.164 -2.625 1.870 -2.730 -3.506 0.989 -2.926 -2.675 2.035 -3.202 -0.163 0.758 -2.776 -0.707 -1.730 ML 154 152 6 157 6 1 1 34 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 33 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 31 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 35 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 34 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 25 39 C G - - MP 159 158 6 163 6 2 2 33 60 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 160 158 6 163 6 1 1 32 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 32 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 30 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 33 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 33 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 26 38 A U - - MP 165 164 6 169 4 2 2 31 58 -7.029 -7.236 -0.050 -5.650 -3.931 -2.927 -3.939 3.415 -4.347 -5.423 -0.038 -3.971 -3.825 0.928 -4.379 -0.381 -0.454 -4.587 -1.978 -2.764 ML 166 164 6 169 4 1 1 31 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 30 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 29 56 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 32 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 31 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 27 - C - - - ML 171 170 6 173 3 1 1 29 56 -8.040 -0.020 -6.694 -1.927 1.671 -2.755 -1.303 D 172 170 6 173 3 0 0 27 54 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 28 - G - - - ML 174 173 3 176 3 1 1 28 55 -8.040 -0.361 -2.199 -0.035 -1.783 1.199 -1.195 D 175 173 3 176 3 0 0 26 53 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 30 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 29 - a - - - ML 177 176 3 179 3 1 1 27 55 -2.687 -0.264 -6.358 0.940 -1.189 -0.015 -0.613 D 178 176 3 179 3 0 0 21 48 -7.772 -0.373 -2.164 IL 179 179 3 179 3 1 1 29 56 -0.979 -1.113 -5.049 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - C - - - ML 180 179 3 182 3 1 1 17 36 -8.040 -0.020 -6.694 -0.986 1.097 -1.808 0.098 D 181 179 3 182 3 0 0 17 36 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - u - - - ML 183 182 3 185 3 1 1 16 35 -8.040 -0.020 -6.694 -0.781 0.225 -1.552 0.933 D 184 182 3 185 3 0 0 16 34 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - c - - - ML 186 185 3 188 3 1 1 15 33 -8.040 -0.020 -6.694 -0.431 0.525 0.041 -0.338 D 187 185 3 188 3 0 0 15 33 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - A - - - ML 189 188 3 191 3 1 1 13 31 -8.040 -0.020 -6.694 1.750 -2.525 -2.142 -2.083 D 190 188 3 191 3 0 0 13 32 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - U - - - ML 192 191 3 194 2 1 1 1 1 * 0.000 -1.627 -1.599 -2.368 1.656 D 193 191 3 194 2 0 0 0 0 * 0.000 IL 194 194 3 194 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 195 194 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB6Cs1H3 ACC RF01547 DESC Trypanosomatid snoRNA TB6Cs1H3 LENG 64 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 13:28:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01547/CM NSEQ 5 EFFN 3.012695 CKSUM 3672703403 STATS LOCAL MSV -8.1017 0.71914 STATS LOCAL VITERBI -8.6908 0.71914 STATS LOCAL FORWARD -3.5329 0.71914 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55969 1.32049 1.17261 1.54535 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 0.00000 * 1 0.11242 3.53840 3.23418 3.27345 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 2 3.50998 0.17566 3.31940 2.35358 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 3 3.51078 0.17560 3.31981 2.35372 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 4 1.17950 2.64586 0.62000 2.48081 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 5 1.96693 1.01594 1.24402 1.56145 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 6 2.15335 2.94606 0.26095 2.79619 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 7 1.33832 2.70518 0.52000 2.57260 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 8 2.77816 3.53613 0.13045 3.47306 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 9 2.89422 2.81073 3.42153 0.16036 9 U - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 10 1.15575 2.10434 2.29883 0.77030 10 u - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 11 3.00115 3.91669 0.10555 3.48900 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 12 3.20752 0.14121 3.77913 2.68252 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 13 0.11242 3.53840 3.23418 3.27345 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 14 3.20752 0.14121 3.77913 2.68252 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 15 3.50799 0.17582 3.31837 2.35321 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 16 2.78064 3.53943 0.13001 3.47756 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 17 2.80074 1.60818 2.59362 0.40912 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 18 3.20345 1.72875 3.03009 0.30984 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 19 2.15328 2.94597 0.26098 2.79607 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 20 2.29923 0.52706 2.89593 1.37012 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 21 3.00115 3.91669 0.10555 3.48900 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 22 2.78032 3.53900 0.13006 3.47699 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 23 1.10408 2.14396 0.88292 1.98252 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 24 0.88257 2.13472 1.11402 1.96776 24 a - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 25 3.50806 0.17582 3.31841 2.35322 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 26 0.23766 3.14965 2.10392 3.06429 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 27 3.20752 0.14121 3.77913 2.68252 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 28 1.46289 2.85535 0.46870 2.46412 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.32219 4.05175 1.35460 1.46634 0.26236 1.09861 0.40547 29 0.67846 2.33920 1.37290 1.94613 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.25788 1.58763 3.77645 1.12941 0.39041 0.12645 2.13045 30 2.29923 0.52706 2.89593 1.37012 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 31 2.10617 1.18445 2.65611 0.68883 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 32 1.83140 0.92642 1.30775 1.75208 35 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 33 0.11242 3.53840 3.23418 3.27345 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 34 2.89422 2.81073 3.42153 0.16036 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 35 3.28662 2.43309 2.95856 0.19485 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 36 2.63434 3.48662 0.15114 3.27268 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 37 1.43283 1.25064 1.93703 1.10590 40 u - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 38 1.76684 0.98948 1.94843 1.15563 41 c - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 39 3.68826 0.15382 3.39152 2.47814 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 40 1.12683 1.52438 2.18469 1.06227 43 u - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 41 0.78789 2.14687 2.25546 1.12849 44 a - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 42 1.30243 2.07041 1.27647 1.13018 45 u - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 43 3.02599 0.52183 2.75792 1.22202 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 44 2.30243 3.21297 0.21449 2.94138 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 45 1.13552 2.75828 0.61845 2.56961 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 46 3.67814 0.15448 3.38682 2.47628 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 47 2.64068 3.49616 0.14980 3.28364 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 48 3.00115 3.91669 0.10555 3.48900 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 49 0.11242 3.53840 3.23418 3.27345 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 50 3.20752 0.14121 3.77913 2.68252 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 51 2.89422 2.81073 3.42153 0.16036 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 52 2.89422 2.81073 3.42153 0.16036 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 53 3.00115 3.91669 0.10555 3.48900 56 G - - - 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 54 3.65794 0.15583 3.37737 2.47251 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 55 2.81032 0.59058 2.51759 1.18693 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 56 3.02618 0.52181 2.75800 1.22202 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 57 1.78886 1.87934 1.07014 1.08709 60 g - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 58 2.71488 1.11389 2.45046 0.65536 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 59 2.63800 3.49212 0.15037 3.27900 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 60 2.64094 3.49655 0.14974 3.28410 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 61 1.55149 2.90843 0.42631 2.51832 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 62 0.11242 3.53840 3.23418 3.27345 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 63 3.00115 3.91669 0.10555 3.48900 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.03540 4.05175 4.05175 1.46634 0.26236 1.09861 0.40547 64 0.11242 3.53840 3.23418 3.27345 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.01786 4.03421 * 1.46634 0.26236 0.00000 * //