INFERNAL1/a [1.1.4 | Dec 2020] NAME TB6Cs1H3 ACC RF01547 DESC Trypanosomatid snoRNA TB6Cs1H3 STATES 196 NODES 49 CLEN 64 W 86 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:17 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.133789 CKSUM 3672703403 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 44.10 NC 32.00 EFP7GF -9.5950 0.71911 ECMLC 0.61031 -7.06814 2.90033 1600000 526488 0.002279 ECMGC 0.41929 -17.46531 -3.63617 1600000 131905 0.003032 ECMLI 0.62117 -5.18926 4.12141 1600000 389886 0.003078 ECMGI 0.45057 -12.72291 -0.73331 1600000 88749 0.004507 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 86 114 -7.029 -7.236 -0.050 -5.650 IL 1 1 2 1 4 1 18 89 117 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 88 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 86 114 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 4 2 3 5 3 0 11 85 112 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 16 87 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - A - - MR 6 5 3 8 3 1 16 85 113 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 7 5 3 8 3 0 9 83 111 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 86 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - G - - MR 9 8 3 11 3 1 16 84 112 -8.426 -0.018 -6.743 -1.742 -2.987 1.758 -2.374 D 10 8 3 11 3 0 8 82 110 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 85 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - A - - MR 12 11 3 14 3 1 15 83 111 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 13 11 3 14 3 0 7 81 109 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 84 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - G - - MR 15 14 3 17 5 1 15 82 110 -7.160 -0.037 -6.975 -7.187 -8.079 -0.169 -1.865 1.277 -1.277 D 16 14 3 17 5 0 6 81 108 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 11 82 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 63 C G - - MP 18 17 3 22 6 2 16 81 109 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 19 17 3 22 6 1 8 79 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 8 79 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 4 76 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 10 80 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 10 80 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 62 C G - - MP 24 23 6 28 6 2 15 79 107 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 25 23 6 28 6 1 8 77 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 8 77 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 4 74 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 9 78 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 10 78 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 61 g c - - MP 30 29 6 34 6 2 14 77 105 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.370 -2.394 -3.427 2.036 -3.964 -4.399 0.351 -3.721 -3.426 2.417 -3.903 1.524 0.087 -3.621 -1.558 -2.332 ML 31 29 6 34 6 1 7 75 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 7 75 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 3 72 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 9 76 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 9 76 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 60 c g - - MP 36 35 6 40 6 2 13 75 103 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -2.387 -2.136 -2.574 0.930 -2.323 -3.267 2.048 -0.166 -2.530 1.215 -2.998 0.910 1.235 -2.679 -0.234 -1.642 ML 37 35 6 40 6 1 7 73 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 7 73 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 3 70 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 8 74 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 9 74 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 59 G C - - MP 42 41 6 46 6 2 11 73 101 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.905 -2.648 -3.937 0.855 -4.617 -4.560 -0.079 -4.278 -3.848 3.164 -4.262 1.325 -0.359 -3.950 -2.050 -2.824 ML 43 41 6 46 6 1 7 71 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 6 71 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 3 69 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 8 73 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 8 72 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 58 G C - - MP 48 47 6 52 6 2 10 71 99 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.740 -2.597 -3.752 1.833 -4.282 -4.469 0.215 -4.076 -3.741 3.062 -4.166 -0.220 -0.089 -3.804 -1.758 -2.653 ML 49 47 6 52 6 1 6 70 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 5 69 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 2 67 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 7 71 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 7 70 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 57 G C - - MP 54 53 6 58 4 2 8 69 97 -7.029 -7.236 -0.050 -5.650 -4.894 -3.167 -5.009 0.098 -5.447 -4.753 -0.773 -5.261 -4.426 3.673 -4.752 -0.872 -1.155 -4.567 -2.819 -3.883 ML 55 53 6 58 4 1 5 69 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 3 68 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 2 67 95 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 7 70 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 6 69 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - U - - - ML 60 59 6 62 3 1 7 67 95 -8.040 -0.020 -6.694 -1.627 -1.599 -2.368 1.656 D 61 59 6 62 3 0 2 65 93 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 6 68 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - u - - - ML 63 62 3 65 3 1 6 66 94 -8.040 -0.020 -6.694 0.288 -0.873 -1.157 0.836 D 64 62 3 65 3 0 1 64 92 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 5 67 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - G - - - ML 66 65 3 68 3 1 6 65 93 -8.040 -0.020 -6.694 -1.742 -2.987 1.758 -2.374 D 67 65 3 68 3 0 1 63 91 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 66 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - C - - - ML 69 68 3 71 3 1 5 64 92 -8.040 -0.020 -6.694 -1.927 1.671 -2.755 -1.303 D 70 68 3 71 3 0 0 62 90 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 65 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - A - - - ML 72 71 3 74 3 1 5 63 91 -8.040 -0.020 -6.694 1.750 -2.525 -2.142 -2.083 D 73 71 3 74 3 0 0 61 89 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 3 64 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - C - - - ML 75 74 3 77 3 1 4 62 90 -8.426 -0.018 -6.743 -1.927 1.671 -2.755 -1.303 D 76 74 3 77 3 0 0 61 88 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 2 62 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 56 - G - - MR 78 77 3 80 3 1 3 61 89 -8.426 -0.018 -6.743 -1.742 -2.987 1.758 -2.374 D 79 77 3 80 3 0 0 59 87 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 2 61 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 55 - U - - MR 81 80 3 83 3 1 3 60 88 -8.426 -0.018 -6.743 -1.627 -1.599 -2.368 1.656 D 82 80 3 83 3 0 0 58 86 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 60 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 54 - U - - MR 84 83 3 86 3 1 2 59 87 -8.426 -0.018 -6.743 -1.627 -1.599 -2.368 1.656 D 85 83 3 86 3 0 0 57 85 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 59 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 53 - C - - MR 87 86 3 89 3 1 2 58 86 -8.426 -0.018 -6.743 -1.927 1.671 -2.755 -1.303 D 88 86 3 89 3 0 0 56 84 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 58 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 52 - A - - MR 90 89 3 92 3 1 2 57 85 -8.426 -0.018 -6.743 1.750 -2.525 -2.142 -2.083 D 91 89 3 92 3 0 0 55 83 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 57 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 51 - G - - MR 93 92 3 95 5 1 1 56 84 -7.160 -0.037 -6.975 -7.187 -8.079 -1.742 -2.987 1.758 -2.374 D 94 92 3 95 5 0 0 54 82 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 56 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 15 50 C G - - MP 96 95 3 100 6 2 2 55 83 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 97 95 3 100 6 1 1 53 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 53 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 50 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 54 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 54 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 16 49 G C - - MP 102 101 6 106 6 2 2 53 81 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.894 -3.167 -5.009 0.098 -5.447 -4.753 -0.773 -5.261 -4.426 3.673 -4.752 -0.872 -1.155 -4.567 -2.819 -3.883 ML 103 101 6 106 6 1 1 51 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 51 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 48 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 52 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 52 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 17 48 u g - - MP 108 107 6 112 6 2 2 51 79 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -3.613 -3.608 -3.504 0.017 -2.503 -4.072 1.774 -3.207 -3.533 0.222 -3.923 -1.699 2.145 -3.768 2.221 -2.444 ML 109 107 6 112 6 1 1 49 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 49 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 47 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 50 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 50 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 18 47 U G - - MP 114 113 6 118 6 2 2 49 77 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.250 -4.177 -3.916 -0.496 -2.625 -4.314 1.665 -3.412 -3.958 -0.330 -4.233 -2.173 0.795 -4.320 3.101 -2.821 ML 115 113 6 118 6 1 1 48 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 47 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 45 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 48 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 48 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 19 46 G C - - MP 120 119 6 124 4 2 2 47 75 -7.029 -7.236 -0.050 -5.650 -3.905 -2.648 -3.937 0.855 -4.617 -4.560 -0.079 -4.278 -3.848 3.164 -4.262 1.325 -0.359 -3.950 -2.050 -2.824 ML 121 119 6 124 4 1 1 46 74 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 1 46 74 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 0 45 73 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 1 48 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 1 47 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 20 - C - - - ML 126 125 6 128 3 1 1 45 73 -8.040 -0.020 -6.694 -0.944 1.039 -1.763 0.178 D 127 125 6 128 3 0 0 43 71 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 46 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 21 - G - - - ML 129 128 3 131 3 1 1 44 72 -8.426 -0.018 -6.743 -1.742 -2.987 1.758 -2.374 D 130 128 3 131 3 0 0 42 70 -5.620 -0.734 -1.403 IL 131 131 3 131 3 1 1 44 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 45 - u - - MR 132 131 3 134 3 1 1 43 71 -8.426 -0.018 -6.743 0.187 -0.867 0.074 0.334 D 133 131 3 134 3 0 0 41 69 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 43 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 44 - a - - MR 135 134 3 137 3 1 1 42 70 -8.426 -0.018 -6.743 0.819 -0.952 -1.095 0.323 D 136 134 3 137 3 0 0 40 68 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 42 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 43 - u - - MR 138 137 3 140 5 1 1 41 69 -7.160 -0.037 -6.975 -7.187 -8.079 0.328 -0.154 -1.038 0.442 D 139 137 3 140 5 0 0 39 67 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 41 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 22 42 G C - - MP 141 140 3 145 6 2 2 40 68 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.894 -3.167 -5.009 0.098 -5.447 -4.753 -0.773 -5.261 -4.426 3.673 -4.752 -0.872 -1.155 -4.567 -2.819 -3.883 ML 142 140 3 145 6 1 1 38 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 38 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 35 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 39 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 39 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 23 41 g c - - MP 147 146 6 151 6 2 2 38 66 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -0.022 -2.187 -2.709 1.801 -2.860 -3.547 0.950 -3.042 -2.795 2.346 -3.300 -0.149 0.713 -2.821 -0.780 -1.807 ML 148 146 6 151 6 1 1 36 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 36 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 33 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 37 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 37 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 24 40 g c - - MP 153 152 6 157 6 2 2 36 64 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 0.607 -2.166 -2.632 1.842 -2.742 -3.506 0.987 -2.938 -2.687 2.090 -3.212 -0.162 0.756 -2.777 -0.712 -1.737 ML 154 152 6 157 6 1 1 34 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 34 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 32 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 35 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 35 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 25 39 C G - - MP 159 158 6 163 6 2 2 34 62 -9.139 -9.078 -0.021 -7.855 -8.135 -8.530 -4.718 -4.639 -4.379 -0.856 -3.061 -4.769 3.600 -3.888 -4.434 -0.638 -4.677 -2.588 0.436 -4.776 -0.772 -3.268 ML 160 158 6 163 6 1 1 33 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 32 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 30 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 33 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 33 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 26 38 A U - - MP 165 164 6 169 4 2 2 32 60 -7.029 -7.236 -0.050 -5.650 -3.931 -2.927 -3.939 3.415 -4.347 -5.423 -0.038 -3.971 -3.825 0.928 -4.379 -0.381 -0.454 -4.587 -1.978 -2.764 ML 166 164 6 169 4 1 1 31 59 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 31 59 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 30 57 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 33 60 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 32 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 27 - C - - - ML 171 170 6 173 3 1 1 30 58 -8.040 -0.020 -6.694 -1.927 1.671 -2.755 -1.303 D 172 170 6 173 3 0 0 28 56 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 31 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 28 - G - - - ML 174 173 3 176 3 1 1 29 57 -8.040 -0.349 -2.246 0.063 -1.727 1.137 -1.138 D 175 173 3 176 3 0 0 27 54 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 30 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 29 - a - - - ML 177 176 3 179 3 1 1 28 56 -2.546 -0.292 -6.370 0.972 -1.206 -0.059 -0.633 D 178 176 3 179 3 0 0 22 50 -7.740 -0.382 -2.132 IL 179 179 3 179 3 1 1 30 58 -0.956 -1.134 -5.125 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - C - - - ML 180 179 3 182 3 1 1 17 36 -8.040 -0.020 -6.694 -0.944 1.039 -1.763 0.178 D 181 179 3 182 3 0 0 17 36 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - u - - - ML 183 182 3 185 3 1 1 16 35 -8.040 -0.020 -6.694 -0.786 0.192 -1.555 0.954 D 184 182 3 185 3 0 0 16 34 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - c - - - ML 186 185 3 188 3 1 1 15 33 -8.040 -0.020 -6.694 -0.441 0.559 -0.001 -0.338 D 187 185 3 188 3 0 0 15 33 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - A - - - ML 189 188 3 191 3 1 1 13 31 -8.040 -0.020 -6.694 1.750 -2.525 -2.142 -2.083 D 190 188 3 191 3 0 0 13 32 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - U - - - ML 192 191 3 194 2 1 1 1 1 * 0.000 -1.627 -1.599 -2.368 1.656 D 193 191 3 194 2 0 0 0 0 * 0.000 IL 194 194 3 194 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 195 194 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB6Cs1H3 ACC RF01547 DESC Trypanosomatid snoRNA TB6Cs1H3 LENG 64 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:17 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 5 EFFN 3.022461 CKSUM 3672703403 STATS LOCAL MSV -8.0015 0.71911 STATS LOCAL VITERBI -8.6661 0.71911 STATS LOCAL FORWARD -3.5354 0.71911 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55926 1.31963 1.17322 1.54597 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 0.00000 * 1 0.11194 3.54239 3.23781 3.27786 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 2 3.51431 0.17492 3.32416 2.35702 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 3 3.51507 0.17486 3.32455 2.35716 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 4 1.20924 2.63240 0.60692 2.46932 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 5 1.97121 1.00263 1.25606 1.56530 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 6 2.16314 2.95466 0.25817 2.80547 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 7 1.36171 2.71718 0.50700 2.58471 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 8 2.78079 3.54001 0.13000 3.47696 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 9 2.89805 2.81394 3.42548 0.15974 9 U - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 10 1.17985 2.10835 2.30916 0.75100 10 u - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 11 3.00506 3.92105 0.10509 3.49327 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 12 3.21229 0.14055 3.78374 2.68645 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 13 0.11194 3.54239 3.23781 3.27786 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 14 3.21229 0.14055 3.78374 2.68645 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 15 3.51232 0.17507 3.32313 2.35665 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 16 2.78329 3.54335 0.12955 3.48150 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 17 2.81435 1.61222 2.60784 0.40509 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 18 3.20682 1.73086 3.03389 0.30890 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 19 2.16308 2.95456 0.25820 2.80535 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 20 2.26181 0.56783 2.85676 1.30331 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 21 3.00506 3.92105 0.10509 3.49327 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 22 2.78299 3.54294 0.12961 3.48095 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 23 1.08521 2.14120 0.90034 1.97886 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 24 0.91566 2.13361 1.07440 1.96726 24 a - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 25 3.51232 0.17507 3.32313 2.35665 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 26 0.23651 3.15484 2.10768 3.06922 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 27 3.21229 0.14055 3.78374 2.68645 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 28 1.38124 2.81101 0.51157 2.41871 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.31143 4.05345 1.38534 1.46634 0.26236 1.09861 0.40547 29 0.65358 2.35580 1.40680 1.96558 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.28235 1.49897 3.78834 1.12639 0.39186 0.12995 2.10490 30 2.26181 0.56783 2.85676 1.30331 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 31 2.11254 1.21020 2.66100 0.67128 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 32 1.84253 0.89834 1.34190 1.75452 35 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 33 0.11194 3.54239 3.23781 3.27786 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 34 2.89805 2.81394 3.42548 0.15974 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 35 3.29147 2.43732 2.96370 0.19385 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 36 2.63780 3.49132 0.15050 3.27702 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 37 1.46249 1.20502 1.93615 1.12579 40 u - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 38 1.71576 1.00864 1.94540 1.16306 41 c - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 39 3.69205 0.15330 3.39559 2.48072 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 40 1.14419 1.47675 2.18952 1.07537 43 u - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 41 0.76718 2.15645 2.26082 1.15303 44 a - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 42 1.26543 2.06883 1.29650 1.14551 45 u - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 43 3.03525 0.50812 2.76691 1.24669 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 44 2.30488 3.21683 0.21378 2.94468 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 45 1.15432 2.77231 0.60394 2.58286 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 46 3.68188 0.15396 3.39086 2.47885 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 47 2.64418 3.50093 0.14915 3.28805 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 48 3.00506 3.92105 0.10509 3.49327 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 49 0.11194 3.54239 3.23781 3.27786 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 50 3.21229 0.14055 3.78374 2.68645 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 51 2.89805 2.81394 3.42548 0.15974 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 52 2.89805 2.81394 3.42548 0.15974 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 53 3.00506 3.92105 0.10509 3.49327 56 G - - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 54 3.66158 0.15531 3.38136 2.47507 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 55 2.82238 0.57601 2.52979 1.20824 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 56 3.03543 0.50810 2.76700 1.24668 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 57 1.79307 1.88529 1.07886 1.07357 60 u - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 58 2.70508 1.06392 2.43754 0.69183 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 59 2.64148 3.49686 0.14972 3.28338 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 60 2.64444 3.50133 0.14909 3.28851 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 61 1.57674 2.92607 0.41461 2.53641 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 62 0.11194 3.54239 3.23781 3.27786 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 63 3.00506 3.92105 0.10509 3.49328 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 64 0.11194 3.54239 3.23781 3.27786 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.01783 4.03593 * 1.46634 0.26236 0.00000 * //