INFERNAL1/a [1.1.5 | Sep 2023] NAME TB6Cs1H1 ACC RF01546 DESC Trypanosomatid snoRNA TB6Cs1H1 STATES 202 NODES 52 CLEN 66 W 83 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 18:59:08 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01546/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 2.141602 CKSUM 3629108434 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 48.70 NC 39.70 EFP7GF -9.7695 0.71910 ECMLC 0.66125 -5.81426 2.82737 1600000 363797 0.003299 ECMGC 0.46539 -15.78386 -3.83021 1600000 104250 0.003837 ECMLI 0.66448 -4.20558 3.96497 1600000 273540 0.004387 ECMGI 0.48624 -11.49326 -0.71911 1600000 75382 0.005306 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 83 103 -7.032 -7.239 -0.050 -5.653 IL 1 1 2 1 4 1 22 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 1 21 83 103 -8.428 -0.018 -6.746 0.983 -0.191 -1.168 -0.510 D 4 2 3 5 3 0 17 82 102 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 20 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 68 - A - - MR 6 5 3 8 3 1 20 82 102 -8.428 -0.018 -6.746 1.751 -2.531 -2.147 -2.089 D 7 5 3 8 3 0 15 81 101 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 19 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 67 - G - - MR 9 8 3 11 3 1 19 81 101 -8.428 -0.018 -6.746 -1.748 -2.994 1.759 -2.381 D 10 8 3 11 3 0 14 80 100 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 18 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 66 - A - - MR 12 11 3 14 3 1 18 80 100 -8.428 -0.018 -6.746 1.751 -2.531 -2.147 -2.089 D 13 11 3 14 3 0 13 79 99 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 18 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 65 - g - - MR 15 14 3 17 5 1 18 79 99 -7.162 -0.037 -6.978 -7.190 -8.081 -0.444 -0.297 0.826 -0.559 D 16 14 3 17 5 0 12 78 98 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 16 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 64 G C - - MP 18 17 3 22 6 2 17 78 98 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.900 -3.169 -5.015 0.094 -5.454 -4.755 -0.780 -5.268 -4.429 3.674 -4.755 -0.875 -1.161 -4.571 -2.826 -3.889 ML 19 17 3 22 6 1 13 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 11 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 9 75 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 14 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 14 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 63 G C - - MP 24 23 6 28 4 2 15 76 96 -7.032 -7.239 -0.050 -5.653 -4.900 -3.169 -5.015 0.094 -5.454 -4.755 -0.780 -5.268 -4.429 3.674 -4.755 -0.875 -1.161 -4.571 -2.826 -3.889 ML 25 23 6 28 4 1 12 77 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 10 76 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 8 75 95 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 14 78 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 13 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 4 - u - - - ML 30 29 6 32 3 1 14 74 94 -8.428 -0.018 -6.746 -0.770 0.494 -1.556 0.735 D 31 29 6 32 3 0 8 73 93 -5.620 -0.734 -1.403 IL 32 32 3 32 3 1 12 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 62 - u - - MR 33 32 3 35 5 1 13 73 93 -7.162 -0.037 -6.978 -7.190 -8.081 -0.770 0.494 -1.556 0.735 D 34 32 3 35 5 0 6 72 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 35 35 3 35 5 1 10 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 61 C G - - MP 36 35 3 40 6 2 14 72 92 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -3.973 -3.909 -3.775 -0.125 -2.595 -4.278 3.144 -3.346 -3.792 0.113 -4.140 -1.872 1.672 -4.074 -0.262 -2.639 ML 37 35 3 40 6 1 7 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 7 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 3 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 9 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 9 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 60 A U - - MP 42 41 6 46 6 2 13 70 90 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -3.936 -2.931 -3.943 3.418 -4.354 -5.431 -0.045 -3.976 -3.829 0.922 -4.384 -0.384 -0.461 -4.594 -1.985 -2.769 ML 43 41 6 46 6 1 7 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 6 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 2 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 9 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 9 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 59 G C - - MP 48 47 6 52 6 2 11 68 88 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.900 -3.169 -5.015 0.094 -5.454 -4.755 -0.780 -5.268 -4.429 3.674 -4.755 -0.875 -1.161 -4.571 -2.826 -3.889 ML 49 47 6 52 6 1 6 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 5 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 2 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 8 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 8 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 58 C G - - MP 54 53 6 58 6 2 10 66 86 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.724 -4.645 -4.384 -0.862 -3.065 -4.773 3.601 -3.892 -4.440 -0.645 -4.681 -2.595 0.431 -4.781 -0.776 -3.274 ML 55 53 6 58 6 1 6 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 4 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 2 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 7 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 7 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 57 G U - - MP 60 59 6 64 4 2 8 64 84 -7.032 -7.239 -0.050 -5.653 -3.718 -2.457 -3.893 1.068 -4.693 -5.420 -0.279 -3.903 -3.529 1.218 -4.057 3.183 -0.635 -4.604 -2.221 -2.573 ML 61 59 6 64 4 1 5 64 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 4 1 3 64 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 63 59 6 64 4 0 1 63 83 -4.568 -4.250 -2.265 -0.520 IL 64 64 5 64 4 1 6 66 86 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 65 65 6 65 3 1 6 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 10 - A - - - ML 66 65 6 68 3 1 7 62 81 -8.043 -0.020 -6.697 1.751 -2.531 -2.147 -2.089 D 67 65 6 68 3 0 1 60 80 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - A - - - ML 69 68 3 71 3 1 6 61 80 -8.043 -0.020 -6.697 1.751 -2.531 -2.147 -2.089 D 70 68 3 71 3 0 0 59 79 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 5 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 12 - A - - - ML 72 71 3 74 3 1 5 60 79 -8.043 -0.020 -6.697 1.751 -2.531 -2.147 -2.089 D 73 71 3 74 3 0 0 58 78 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 4 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 13 - A - - - ML 75 74 3 77 3 1 5 58 78 -8.043 -0.020 -6.697 1.751 -2.531 -2.147 -2.089 D 76 74 3 77 3 0 0 57 77 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - C - - - ML 78 77 3 80 3 1 4 57 77 -8.043 -0.020 -6.697 -1.934 1.672 -2.762 -1.308 D 79 77 3 80 3 0 0 56 76 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 3 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - A - - - ML 81 80 3 83 3 1 3 56 76 -8.428 -0.018 -6.746 1.751 -2.531 -2.147 -2.089 D 82 80 3 83 3 0 0 55 74 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 2 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 56 - G - - MR 84 83 3 86 3 1 3 55 75 -8.428 -0.018 -6.746 -1.748 -2.994 1.759 -2.381 D 85 83 3 86 3 0 0 54 73 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 55 - U - - MR 87 86 3 89 3 1 2 54 74 -8.428 -0.018 -6.746 -1.633 -1.603 -2.373 1.658 D 88 86 3 89 3 0 0 53 72 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 54 - C - - MR 90 89 3 92 3 1 2 53 73 -8.428 -0.018 -6.746 -1.934 1.672 -2.762 -1.308 D 91 89 3 92 3 0 0 52 71 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 53 - C - - MR 93 92 3 95 3 1 2 52 72 -8.428 -0.018 -6.746 -1.934 1.672 -2.762 -1.308 D 94 92 3 95 3 0 0 51 70 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 53 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 52 - A - - MR 96 95 3 98 3 1 1 51 71 -8.428 -0.018 -6.746 1.751 -2.531 -2.147 -2.089 D 97 95 3 98 3 0 0 50 69 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 52 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 51 - C - - MR 99 98 3 101 5 1 1 50 70 -7.162 -0.037 -6.978 -7.190 -8.081 -1.934 1.672 -2.762 -1.308 D 100 98 3 101 5 0 0 49 68 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 50 C G - - MP 102 101 3 106 6 2 2 49 69 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.724 -4.645 -4.384 -0.862 -3.065 -4.773 3.601 -3.892 -4.440 -0.645 -4.681 -2.595 0.431 -4.781 -0.776 -3.274 ML 103 101 3 106 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 49 A U - - MP 108 107 6 112 6 2 2 47 67 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -3.936 -2.931 -3.943 3.418 -4.354 -5.431 -0.045 -3.976 -3.829 0.922 -4.384 -0.384 -0.461 -4.594 -1.985 -2.769 ML 109 107 6 112 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 48 G C - - MP 114 113 6 118 6 2 2 45 65 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.900 -3.169 -5.015 0.094 -5.454 -4.755 -0.780 -5.268 -4.429 3.674 -4.755 -0.875 -1.161 -4.571 -2.826 -3.889 ML 115 113 6 118 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 47 g c - - MP 120 119 6 124 6 2 2 43 63 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -2.724 -2.139 -2.834 1.135 -3.046 -3.532 0.840 -3.192 -2.909 2.496 -3.351 0.935 0.593 0.124 -0.912 -1.920 ML 121 119 6 124 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 39 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 20 46 C G - - MP 126 125 6 130 6 2 2 41 61 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.724 -4.645 -4.384 -0.862 -3.065 -4.773 3.601 -3.892 -4.440 -0.645 -4.681 -2.595 0.431 -4.781 -0.776 -3.274 ML 127 125 6 130 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 21 45 G C - - MP 132 131 6 136 6 2 2 39 59 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -4.900 -3.169 -5.015 0.094 -5.454 -4.755 -0.780 -5.268 -4.429 3.674 -4.755 -0.875 -1.161 -4.571 -2.826 -3.889 ML 133 131 6 136 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 38 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 39 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 22 44 c g - - MP 138 137 6 142 4 2 2 37 57 -7.032 -7.239 -0.050 -5.653 -2.267 -2.306 -2.413 1.534 -2.166 -3.228 1.622 0.204 -2.456 1.071 -2.992 -0.639 1.278 -2.563 0.971 -1.551 ML 139 137 6 142 4 1 1 38 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 37 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 0 36 56 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 39 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - u - - - ML 144 143 6 146 3 1 1 35 54 -8.043 -0.020 -6.697 0.251 0.005 -1.061 0.408 D 145 143 6 146 3 0 0 34 53 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - g - - - ML 147 146 3 149 3 1 1 34 53 -8.428 -0.018 -6.746 -0.486 -1.164 0.795 0.144 D 148 146 3 149 3 0 0 33 52 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 43 - U - - MR 150 149 3 152 3 1 1 33 52 -8.428 -0.018 -6.746 -0.977 -0.451 -1.721 1.297 D 151 149 3 152 3 0 0 31 50 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 42 - c - - MR 153 152 3 155 5 1 1 32 51 -7.162 -0.037 -6.978 -7.190 -8.081 -0.848 0.856 -1.656 0.397 D 154 152 3 155 5 0 0 31 50 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 25 41 u a - - MP 156 155 3 160 6 2 2 31 50 -9.140 -9.080 -0.021 -7.856 -8.136 -8.531 -3.303 -3.346 -3.302 0.175 -0.010 -3.972 1.686 -3.147 -3.325 0.312 -3.779 -1.522 2.868 -3.520 -0.277 -2.282 ML 157 155 3 160 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 26 40 G C - - MP 162 161 6 166 4 2 2 29 48 -2.331 -7.239 -0.368 -5.653 -4.900 -3.169 -5.015 0.094 -5.454 -4.755 -0.780 -5.268 -4.429 3.674 -4.755 -0.875 -1.161 -4.571 -2.826 -3.889 ML 163 161 6 166 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 26 45 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 28 47 -2.602 -3.285 -0.485 -5.770 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 28 - u - - - ML 168 167 6 170 3 1 1 25 44 -8.043 -0.020 -6.697 -0.770 0.494 -1.556 0.735 D 169 167 6 170 3 0 0 24 43 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 29 - u - - - ML 171 170 3 173 3 1 1 24 43 -8.043 -0.020 -6.697 0.188 -0.883 -1.196 0.912 D 172 170 3 173 3 0 0 23 42 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 30 - U - - - ML 174 173 3 176 3 1 1 23 42 -8.043 -0.020 -6.697 -1.633 -1.603 -2.373 1.658 D 175 173 3 176 3 0 0 22 41 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 31 - a - - - ML 177 176 3 179 3 1 1 22 40 -8.043 -0.020 -6.697 0.348 -0.867 -0.038 0.269 D 178 176 3 179 3 0 0 21 39 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 32 - c - - - ML 180 179 3 182 3 1 1 20 39 -2.459 -0.307 -6.697 -0.483 0.676 -0.150 -0.347 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 21 39 -1.965 -0.506 -4.665 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - a - - - ML 183 182 3 185 3 1 1 19 37 -8.043 -0.020 -6.697 0.624 -0.166 -0.409 -0.297 D 184 182 3 185 3 0 0 18 37 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - u - - - ML 186 185 3 188 3 1 1 17 36 -8.043 -0.020 -6.697 0.230 0.029 -1.067 0.411 D 187 185 3 188 3 0 0 17 36 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - C - - - ML 189 188 3 191 3 1 1 16 35 -8.043 -0.020 -6.697 -0.781 1.115 -0.881 -0.496 D 190 188 3 191 3 0 0 16 34 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 37 - g - - - ML 192 191 3 194 3 1 1 15 33 -8.043 -0.020 -6.697 0.090 -0.205 0.344 -0.323 D 193 191 3 194 3 0 0 15 33 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 38 - a - - - ML 195 194 3 197 3 1 1 13 31 -8.043 -0.020 -6.697 0.725 -1.466 0.527 -0.880 D 196 194 3 197 3 0 0 13 32 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 39 - U - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 -1.633 -1.603 -2.373 1.658 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB6Cs1H1 ACC RF01546 DESC Trypanosomatid snoRNA TB6Cs1H1 LENG 66 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 18:59:08 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01546/CM NSEQ 6 EFFN 2.885742 CKSUM 3629108434 STATS LOCAL MSV -8.5211 0.71910 STATS LOCAL VITERBI -8.8474 0.71910 STATS LOCAL FORWARD -3.6643 0.71910 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42411 1.25956 1.35352 1.52708 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 0.00000 * 1 0.64515 1.49949 2.32739 1.86678 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 2 2.74563 3.48734 0.13620 3.42531 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 3 2.74616 3.48803 0.13610 3.42626 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 4 2.06913 0.98208 2.63121 0.85054 4 u - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 5 2.81675 0.49791 2.58007 1.36011 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 6 0.25318 3.08289 2.05472 3.00144 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 7 2.74613 3.48798 0.13610 3.42620 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 8 3.45258 0.18586 3.25649 2.30839 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 9 2.03592 3.14581 0.25309 2.99551 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 10 0.11891 3.48564 3.18623 3.21520 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 11 0.11891 3.48564 3.18623 3.21520 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 12 0.11891 3.48564 3.18623 3.21519 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 13 0.11891 3.48564 3.18623 3.21520 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 14 3.14428 0.15015 3.71777 2.63059 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 15 0.11891 3.48564 3.18623 3.21520 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 16 3.45107 0.18598 3.25572 2.30812 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 17 0.25331 3.08220 2.05456 3.00049 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 18 2.74558 3.48727 0.13621 3.42522 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 19 1.84028 2.19543 0.65369 1.56164 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 20 3.45041 0.18604 3.25538 2.30799 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 21 2.74393 3.48512 0.13651 3.42228 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 22 1.47685 1.23665 1.76510 1.17080 22 u - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 23 1.20781 1.35374 2.19672 1.10350 23 u - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 24 1.84219 2.32346 0.75188 1.30153 24 g - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 25 2.60588 1.31681 2.42240 0.56306 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 26 2.74603 3.48786 0.13612 3.42603 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.27111 1.51632 4.02035 0.15618 1.93382 1.09861 0.40547 27 2.06913 0.98209 2.63121 0.85054 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 28 1.26017 2.10230 2.32415 0.70047 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 29 2.84355 2.76838 3.36932 0.16889 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 30 1.13895 2.05384 1.38996 1.19562 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 31 1.85773 0.82337 1.46890 1.74385 32 c - - _ 1.38629 1.38629 1.38629 1.38629 0.27111 1.51632 4.02035 0.15618 1.93382 1.09861 0.40547 32 0.92557 1.47821 1.67850 1.66603 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 33 1.22427 1.33485 2.20184 1.10192 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 34 2.13973 0.49905 2.07507 1.89940 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 35 1.35674 1.50961 1.08407 1.69669 37 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 36 0.84724 2.56911 0.96536 2.17198 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 37 2.84355 2.76838 3.36932 0.16889 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 38 3.62909 0.16154 3.33347 2.44237 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 39 0.51468 2.59260 1.44433 2.39057 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 40 2.13993 0.71302 2.72239 1.11945 42 c - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 41 2.25373 1.74284 2.77689 0.41895 43 U - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 42 1.74072 1.93582 1.08518 1.07161 44 u - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 43 3.61154 0.16277 3.32535 2.43909 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 44 2.58787 3.42293 0.16017 3.21368 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 45 2.28062 0.74473 2.00181 1.24540 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 46 3.62228 0.16201 3.33033 2.44110 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 47 3.23179 2.37876 2.89459 0.20761 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 48 2.59481 3.43323 0.15861 3.22560 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 49 3.14428 0.15015 3.71777 2.63059 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 50 0.11891 3.48564 3.18623 3.21520 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 51 3.14428 0.15015 3.71777 2.63059 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 52 3.14428 0.15015 3.71777 2.63059 54 C - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 53 2.84355 2.76838 3.36932 0.16889 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 54 2.94912 3.85866 0.11183 3.43200 56 G - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 55 3.20043 2.11136 2.93941 0.24171 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 56 2.58915 3.42483 0.15989 3.21587 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 57 3.62327 0.16194 3.33079 2.44129 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 58 3.23258 2.37888 2.89491 0.20753 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 59 1.53330 2.74884 0.43953 2.57922 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 60 2.06913 0.98209 2.63121 0.85054 62 u - - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 61 3.62927 0.16152 3.33356 2.44240 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 62 3.63841 0.16089 3.33776 2.44409 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 63 1.83029 1.58772 0.71386 1.92763 65 g - - : 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 64 0.11891 3.48564 3.18623 3.21520 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 65 2.94912 3.85866 0.11183 3.43200 67 G - - : 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 66 0.11891 3.48564 3.18623 3.21520 68 A - - : 1.38629 1.38629 1.38629 1.38629 0.01844 4.00224 * 1.46634 0.26236 0.00000 * //