INFERNAL1/a [1.1.4 | Dec 2020] NAME TB3Cs2H1 ACC RF01545 DESC Trypanosomatid snoRNA TB3Cs2H1 STATES 211 NODES 56 CLEN 69 W 85 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:12 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.738281 CKSUM 862896885 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 62.50 NC 33.50 EFP7GF -5.3323 0.72735 ECMLC 0.69909 -5.21403 2.95987 1600000 363797 0.003299 ECMGC 0.39639 -17.33967 -3.23766 1600000 107089 0.003735 ECMLI 0.58497 -5.35089 3.93286 1600000 273986 0.004380 ECMGI 0.42145 -12.58025 -0.05402 1600000 78483 0.005097 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 105 -6.867 -7.074 -0.056 -5.489 IL 1 1 2 1 4 1 19 89 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 19 85 105 -7.890 -0.022 -6.544 1.685 -2.222 -1.869 -1.750 D 4 2 3 5 3 0 14 83 103 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 18 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 18 84 104 -8.285 -0.020 -6.603 1.685 -2.222 -1.869 -1.750 D 7 5 3 8 3 0 13 82 102 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 17 85 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 69 - A - - MR 9 8 3 11 3 1 17 83 103 -8.285 -0.020 -6.603 1.685 -2.222 -1.869 -1.750 D 10 8 3 11 3 0 11 81 101 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 16 84 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 68 - G - - MR 12 11 3 14 3 1 17 82 102 -8.285 -0.020 -6.603 -1.421 -2.615 1.684 -2.001 D 13 11 3 14 3 0 10 80 100 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 15 83 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 67 - A - - MR 15 14 3 17 3 1 16 81 101 -8.285 -0.020 -6.603 1.685 -2.222 -1.869 -1.750 D 16 14 3 17 3 0 9 79 99 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 14 82 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 66 - G - - MR 18 17 3 20 5 1 16 80 100 -7.029 -0.041 -6.844 -7.056 -7.948 -1.421 -2.615 1.684 -2.001 D 19 17 3 20 5 0 8 78 98 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 13 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 65 U A - - MP 21 20 3 25 6 2 17 79 99 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.037 -3.857 -3.892 -0.163 -2.867 -4.470 1.457 -3.552 -3.898 0.114 -4.279 -1.761 3.250 -4.194 -0.547 -2.737 ML 22 20 3 25 6 1 10 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 10 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 5 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 12 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 12 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 64 G C - - MP 27 26 6 31 6 2 16 77 97 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.600 -3.026 -4.687 0.294 -5.032 -4.637 -0.432 -4.918 -4.233 3.602 -4.581 -0.721 -0.821 -4.374 -2.462 -3.566 ML 28 26 6 31 6 1 10 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 9 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 5 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 11 76 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 12 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 63 A U - - MP 33 32 6 37 6 2 15 75 95 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -3.671 -2.734 -3.698 3.248 -3.977 -5.029 0.315 -3.748 -3.595 1.209 -4.137 -0.230 -0.103 -4.236 -1.626 -2.539 ML 34 32 6 37 6 1 9 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 9 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 4 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 11 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 11 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 62 G C - - MP 39 38 6 43 6 2 14 73 93 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.600 -3.026 -4.687 0.294 -5.032 -4.637 -0.432 -4.918 -4.233 3.602 -4.581 -0.721 -0.821 -4.374 -2.462 -3.566 ML 40 38 6 43 6 1 9 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 8 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 4 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 10 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 10 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 61 G C - - MP 45 44 6 49 6 2 13 71 91 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.600 -3.026 -4.687 0.294 -5.032 -4.637 -0.432 -4.918 -4.233 3.602 -4.581 -0.721 -0.821 -4.374 -2.462 -3.566 ML 46 44 6 49 6 1 8 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 7 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 3 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 9 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 9 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 60 G C - - MP 51 50 6 55 6 2 11 69 89 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.600 -3.026 -4.687 0.294 -5.032 -4.637 -0.432 -4.918 -4.233 3.602 -4.581 -0.721 -0.821 -4.374 -2.462 -3.566 ML 52 50 6 55 6 1 7 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 6 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 3 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 8 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 8 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 59 c g - - MP 57 56 6 61 4 2 9 67 87 -6.867 -7.074 -0.056 -5.489 -2.478 -2.538 1.094 0.686 -2.171 -3.326 1.682 -2.673 -2.628 0.858 -3.131 -0.886 1.199 -2.749 1.504 -1.703 ML 58 56 6 61 4 1 6 67 87 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 4 66 87 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 3 65 86 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 8 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 7 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - C - - - ML 63 62 6 65 3 1 8 64 84 -7.890 -0.022 -6.544 -1.562 1.572 -2.379 -1.012 D 64 62 6 65 3 0 2 63 83 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - U - - - ML 66 65 3 68 3 1 7 63 83 -7.890 -0.022 -6.544 -1.349 -1.370 -2.075 1.577 D 67 65 3 68 3 0 2 62 82 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 6 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - A - - - ML 69 68 3 71 3 1 6 62 82 -7.890 -0.022 -6.544 1.685 -2.222 -1.869 -1.750 D 70 68 3 71 3 0 1 61 81 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 5 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - A - - - ML 72 71 3 74 3 1 6 61 81 -7.890 -0.022 -6.544 1.685 -2.222 -1.869 -1.750 D 73 71 3 74 3 0 1 60 79 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 5 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - G - - - ML 75 74 3 77 3 1 5 60 80 -7.890 -0.022 -6.544 -1.421 -2.615 1.684 -2.001 D 76 74 3 77 3 0 0 59 78 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 4 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - A - - - ML 78 77 3 80 3 1 4 59 79 -8.285 -0.020 -6.603 1.685 -2.222 -1.869 -1.750 D 79 77 3 80 3 0 0 58 77 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 3 60 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 58 - U - - MR 81 80 3 83 3 1 4 58 78 -8.285 -0.020 -6.603 -1.349 -1.370 -2.075 1.577 D 82 80 3 83 3 0 0 56 76 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 59 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 57 - U - - MR 84 83 3 86 3 1 3 57 77 -8.285 -0.020 -6.603 -1.349 -1.370 -2.075 1.577 D 85 83 3 86 3 0 0 55 75 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 2 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 56 - A - - MR 87 86 3 89 3 1 3 56 76 -8.285 -0.020 -6.603 1.685 -2.222 -1.869 -1.750 D 88 86 3 89 3 0 0 54 74 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 55 - C - - MR 90 89 3 92 3 1 2 55 75 -8.285 -0.020 -6.603 -1.562 1.572 -2.379 -1.012 D 91 89 3 92 3 0 0 53 73 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 54 - U - - MR 93 92 3 95 3 1 2 54 74 -8.285 -0.020 -6.603 -1.349 -1.370 -2.075 1.577 D 94 92 3 95 3 0 0 52 72 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 53 - G - - MR 96 95 3 98 5 1 1 53 73 -7.029 -0.041 -6.844 -7.056 -7.948 -1.421 -2.615 1.684 -2.001 D 97 95 3 98 5 0 0 52 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 16 52 g u - - MP 99 98 3 103 6 2 3 52 72 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -3.523 -2.329 -3.682 1.189 -4.322 -5.048 0.054 -3.718 -3.370 1.483 -3.886 2.978 -0.306 -4.275 -1.887 -2.403 ML 100 98 3 103 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 17 51 C G - - MP 105 104 6 109 6 2 2 50 70 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.401 -4.294 -4.116 -0.540 -2.867 -4.547 3.503 -3.662 -4.161 -0.277 -4.437 -2.239 0.662 -4.480 -0.570 -3.006 ML 106 104 6 109 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 18 50 U A - - MP 111 110 6 115 6 2 2 48 68 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.037 -3.857 -3.892 -0.163 -2.867 -4.470 1.457 -3.552 -3.898 0.114 -4.279 -1.761 3.250 -4.194 -0.547 -2.737 ML 112 110 6 115 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 19 49 G C - - MP 117 116 6 121 6 2 2 46 66 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.600 -3.026 -4.687 0.294 -5.032 -4.637 -0.432 -4.918 -4.233 3.602 -4.581 -0.721 -0.821 -4.374 -2.462 -3.566 ML 118 116 6 121 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 44 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 42 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 20 48 g c - - MP 123 122 6 127 6 2 2 44 64 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -2.763 -2.583 -2.836 0.844 0.892 -3.600 1.599 -2.929 -2.890 2.119 -3.382 -0.653 1.155 -2.983 -0.295 -1.886 ML 124 122 6 127 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 43 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 21 47 G C - - MP 129 128 6 133 6 2 2 42 62 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -4.600 -3.026 -4.687 0.294 -5.032 -4.637 -0.432 -4.918 -4.233 3.602 -4.581 -0.721 -0.821 -4.374 -2.462 -3.566 ML 130 128 6 133 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 41 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 22 46 g c - - MP 135 134 6 139 6 2 2 40 59 -9.077 -9.017 -0.022 -7.793 -8.073 -8.468 -3.625 -2.488 -3.680 1.025 -4.240 -4.445 0.197 -3.967 -3.599 2.955 -4.042 1.558 -0.091 -3.782 -1.756 -2.564 ML 136 134 6 139 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 23 45 a u - - MP 141 140 6 145 4 2 2 38 57 -6.867 -7.074 -0.056 -5.489 -2.739 -2.307 -2.861 2.147 -2.879 -3.834 1.046 -3.049 -2.849 1.454 -3.385 -0.142 0.721 -3.103 -0.760 1.295 ML 142 140 6 145 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 38 58 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 37 57 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 24 - a - - - ML 147 146 6 149 3 1 1 36 55 -7.890 -0.420 -2.008 0.621 0.215 -1.060 -0.282 D 148 146 6 149 3 0 0 34 54 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 25 - U - - - ML 150 149 3 152 3 1 1 35 54 -7.498 -0.029 -6.152 -0.686 -0.839 -1.360 1.281 D 151 149 3 152 3 0 0 33 52 -7.801 -3.314 -0.160 IL 152 152 3 152 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 26 - U - - - ML 153 152 3 155 3 1 1 34 53 -7.498 -0.029 -6.152 -0.686 -0.839 -1.360 1.281 D 154 152 3 155 3 0 0 32 52 -7.801 -0.364 -2.193 IL 155 155 3 155 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 27 - C - - - ML 156 155 3 158 3 1 1 32 52 -7.890 -0.022 -6.544 -1.562 1.572 -2.379 -1.012 D 157 155 3 158 3 0 0 31 51 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 28 - G - - - ML 159 158 3 161 3 1 1 31 50 -7.890 -0.022 -6.544 -1.421 -2.615 1.684 -2.001 D 160 158 3 161 3 0 0 30 49 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 29 - G - - - ML 162 161 3 164 3 1 1 30 49 -7.890 -0.022 -6.544 -1.421 -2.615 1.684 -2.001 D 163 161 3 164 3 0 0 29 48 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 30 - u - - - ML 165 164 3 167 3 1 1 29 48 -7.890 -0.022 -6.544 0.527 -0.809 -1.016 0.579 D 166 164 3 167 3 0 0 28 47 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - a - - - ML 168 167 3 170 3 1 1 28 47 -7.890 -0.022 -6.544 0.678 -1.334 0.492 -0.743 D 169 167 3 170 3 0 0 27 46 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - u - - - ML 171 170 3 173 3 1 1 27 46 -7.890 -0.022 -6.544 -0.646 0.418 -1.416 0.722 D 172 170 3 173 3 0 0 26 45 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - u - - - ML 174 173 3 176 3 1 1 26 45 -7.890 -0.022 -6.544 -0.646 0.418 -1.416 0.722 D 175 173 3 176 3 0 0 25 44 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - U - - - ML 177 176 3 179 3 1 1 25 44 -7.890 -0.022 -6.544 -1.349 -1.370 -2.075 1.577 D 178 176 3 179 3 0 0 24 43 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - a - - - ML 180 179 3 182 3 1 1 24 42 -7.890 -0.022 -6.544 0.555 -0.814 -1.013 0.552 D 181 179 3 182 3 0 0 23 42 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - U - - - ML 183 182 3 185 3 1 1 22 41 -7.890 -0.022 -6.544 -1.349 -1.370 -2.075 1.577 D 184 182 3 185 3 0 0 21 40 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - C - - - ML 186 185 3 188 3 1 1 21 40 -7.890 -0.022 -6.544 -1.562 1.572 -2.379 -1.012 D 187 185 3 188 3 0 0 20 39 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - C - - - ML 189 188 3 191 3 1 1 20 39 -7.890 -0.022 -6.544 -1.562 1.572 -2.379 -1.012 D 190 188 3 191 3 0 0 19 38 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - a - - - ML 192 191 3 194 3 1 1 19 37 -7.890 -0.022 -6.544 0.678 -1.334 0.492 -0.743 D 193 191 3 194 3 0 0 18 37 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - U - - - ML 195 194 3 197 3 1 1 18 36 -7.890 -0.022 -6.544 -1.349 -1.370 -2.075 1.577 D 196 194 3 197 3 0 0 17 36 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - G - - - ML 198 197 3 200 3 1 1 16 35 -7.890 -0.022 -6.544 -1.421 -2.615 1.684 -2.001 D 199 197 3 200 3 0 0 16 34 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - u - - - ML 201 200 3 203 3 1 1 15 33 -7.890 -0.022 -6.544 -0.647 0.448 -1.418 0.699 D 202 200 3 203 3 0 0 15 33 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 43 - u - - - ML 204 203 3 206 3 1 1 13 32 -7.890 -0.022 -6.544 -0.647 0.448 -1.418 0.699 D 205 203 3 206 3 0 0 13 32 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 44 - u - - - ML 207 206 3 209 2 1 1 1 1 * 0.000 -0.646 0.418 -1.416 0.722 D 208 206 3 209 2 0 0 0 0 * 0.000 IL 209 209 3 209 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 210 209 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB3Cs2H1 ACC RF01545 DESC Trypanosomatid snoRNA TB3Cs2H1 LENG 69 MAXL 158 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:12 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 2 EFFN 1.597656 CKSUM 862896885 STATS LOCAL MSV -8.2491 0.72735 STATS LOCAL VITERBI -9.5867 0.72735 STATS LOCAL FORWARD -2.8863 0.72735 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.44618 1.42521 1.31016 1.36925 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23907 2.84674 2.61008 2.51231 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23907 2.84674 2.61008 2.51231 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.56744 1.61876 2.26850 0.47537 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.33664 2.82519 0.24641 2.77335 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.54188 2.33163 1.51889 2.28028 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.33755 2.82606 0.24613 2.77463 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.33740 2.82592 0.24618 2.77442 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.33716 2.82568 0.24625 2.77408 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 1.38465 1.45345 1.75101 1.07228 9 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.37450 0.32802 2.93676 2.01325 10 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.24990 2.27720 2.74898 0.31742 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23907 2.84674 2.61008 2.51231 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23907 2.84674 2.61007 2.51231 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.28616 3.09952 0.24302 2.67335 14 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23907 2.84674 2.61007 2.51231 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 1.75970 2.49530 0.42469 2.39187 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.80923 0.35823 2.53135 1.82460 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57135 1.61872 2.26986 0.47467 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.33743 2.82594 0.24617 2.77446 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 1.92444 1.15795 1.14500 1.50649 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.33710 2.82562 0.24627 2.77399 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 1.87305 2.43461 0.41610 2.31163 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 1.20289 1.85415 1.39271 1.22184 23 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.96518 1.25137 2.09603 1.56050 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.33172 3.73767 1.35285 1.46634 0.26236 1.09861 0.40547 25 1.82011 1.93668 2.28358 0.52443 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06424 3.47019 3.47019 1.46634 0.26236 2.55390 0.08097 26 1.82011 1.93668 2.28358 0.52443 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06424 3.47019 3.47019 1.46634 0.26236 0.16908 1.86075 27 2.37450 0.32802 2.93676 2.01325 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.28616 3.09952 0.24302 2.67335 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.28616 3.09952 0.24302 2.67335 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 1.02636 1.92930 2.07044 0.99341 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.92468 2.27824 1.06028 1.86745 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 1.80336 1.11177 2.33284 0.89341 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 1.80336 1.11177 2.33284 0.89341 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.24990 2.27720 2.74898 0.31742 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.00759 1.93256 2.06825 1.01137 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.24990 2.27720 2.74898 0.31742 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.37450 0.32802 2.93676 2.01325 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.37450 0.32802 2.93676 2.01325 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.92468 2.27824 1.06028 1.86745 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.24990 2.27720 2.74898 0.31742 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.28616 3.09952 0.24302 2.67335 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 1.80398 1.09178 2.33449 0.90912 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 1.80398 1.09178 2.33449 0.90912 43 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 1.80336 1.11177 2.33284 0.89341 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 1.98537 1.60213 1.66667 0.75008 45 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.53992 0.70437 2.24804 1.13601 46 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.99210 0.28774 2.65514 2.04353 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 1.31020 1.24770 1.34251 1.70440 48 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.99460 0.28739 2.65611 2.04402 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.54054 2.44697 1.45522 2.32628 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.09994 2.70001 0.30950 2.57028 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.61955 1.58538 2.30588 0.47381 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.28616 3.09952 0.24302 2.67335 53 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.24990 2.27720 2.74898 0.31742 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.37450 0.32802 2.93676 2.01325 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.23907 2.84674 2.61007 2.51231 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.24990 2.27720 2.74898 0.31742 57 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.24990 2.27720 2.74898 0.31742 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 1.68472 1.91305 0.70334 1.76057 59 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.99225 0.28772 2.65520 2.04356 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.99342 0.28756 2.65565 2.04379 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.99483 0.28736 2.65620 2.04407 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.51388 1.76986 2.14826 0.45886 63 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.99858 0.28685 2.65766 2.04479 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 0.54015 2.44802 1.45516 2.32778 65 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 2.28616 3.09952 0.24302 2.67335 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 0.23907 2.84674 2.61007 2.51231 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 68 2.28616 3.09952 0.24302 2.67335 68 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 69 0.23907 2.84674 2.61007 2.51231 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //