INFERNAL1/a [1.1.4 | Dec 2020] NAME TB11Cs5H2 ACC RF01543 DESC Trypanosomatid snoRNA TB11Cs5H2 STATES 208 NODES 53 CLEN 68 W 85 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:07 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.397461 CKSUM 3320576986 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.10 NC 46.20 EFP7GF -9.5072 0.71909 ECMLC 0.63334 -6.37668 2.66358 1600000 367913 0.003262 ECMGC 0.48564 -14.64106 -3.19215 1600000 103928 0.003849 ECMLI 0.66339 -4.41714 3.95895 1600000 310740 0.003862 ECMGI 0.51729 -10.31391 -0.16079 1600000 76389 0.005236 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 104 -7.128 -7.335 -0.047 -5.749 IL 1 1 2 1 4 1 22 88 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 22 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 21 85 105 -8.132 -0.018 -6.786 1.783 -2.712 -2.310 -2.289 D 4 2 3 5 3 0 17 83 103 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 21 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 20 84 103 -8.512 -0.017 -6.830 0.882 0.024 -1.213 -0.494 D 7 5 3 8 3 0 16 82 102 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 20 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 70 - A - - MR 9 8 3 11 3 1 19 83 102 -8.512 -0.017 -6.830 1.783 -2.712 -2.310 -2.289 D 10 8 3 11 3 0 14 81 101 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 19 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 69 - G - - MR 12 11 3 14 3 1 18 82 101 -8.512 -0.017 -6.830 -1.936 -3.208 1.793 -2.595 D 13 11 3 14 3 0 13 80 100 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 18 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 68 - A - - MR 15 14 3 17 3 1 17 81 100 -8.512 -0.017 -6.830 1.783 -2.712 -2.310 -2.289 D 16 14 3 17 3 0 12 79 99 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 17 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 67 - g - - MR 18 17 3 20 5 1 17 80 99 -7.241 -0.035 -7.056 -7.269 -8.160 0.490 -1.618 0.832 -1.033 D 19 17 3 20 5 0 11 78 98 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 15 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 66 G C - - MP 21 20 3 25 6 2 16 79 98 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -5.073 -3.254 -5.211 -0.025 -5.698 -4.820 -0.980 -5.472 -4.537 3.708 -4.852 -0.967 -1.357 -4.683 -3.036 -4.083 ML 22 20 3 25 6 1 12 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 10 78 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 8 76 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 14 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 13 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 65 C G - - MP 27 26 6 31 4 2 14 77 96 -7.128 -7.335 -0.047 -5.749 -4.920 -4.858 -4.546 -1.060 -3.187 -4.909 3.651 -4.034 -4.610 -0.866 -4.828 -2.811 0.286 -4.964 -0.905 -3.438 ML 28 26 6 31 4 1 11 77 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 9 76 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 7 75 95 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 13 78 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 12 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 5 - a - - - ML 33 32 6 35 3 1 13 74 94 -8.512 -0.017 -6.830 0.811 -0.987 -1.141 0.364 D 34 32 6 35 3 0 7 73 93 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 11 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 64 - g - - MR 36 35 3 38 5 1 12 73 93 -2.310 -0.357 -7.056 -7.269 -8.160 0.490 -1.618 0.832 -1.033 D 37 35 3 38 5 0 6 72 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 10 73 93 -3.092 -0.288 -6.603 -4.771 -5.877 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 62 G C - - MP 39 38 3 43 6 2 13 72 92 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -3.983 -2.694 -4.013 0.814 -4.763 -4.648 -0.194 -4.360 -3.917 3.156 -4.331 1.482 -0.468 -4.034 -2.168 -2.890 ML 40 38 3 43 6 1 7 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 7 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 3 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 8 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 9 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 61 C G - - MP 45 44 6 49 6 2 11 70 90 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -4.920 -4.858 -4.546 -1.060 -3.187 -4.909 3.651 -4.034 -4.610 -0.866 -4.828 -2.811 0.286 -4.964 -0.905 -3.438 ML 46 44 6 49 6 1 7 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 6 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 2 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 8 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 8 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 60 A U - - MP 51 50 6 55 6 2 10 68 88 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -4.103 -3.058 -4.095 3.501 -4.594 -5.690 -0.273 -4.116 -3.978 0.742 -4.541 -0.487 -0.689 -4.823 -2.212 -2.913 ML 52 50 6 55 6 1 6 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 2 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 7 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 7 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 59 U A - - MP 57 56 6 61 4 2 8 66 86 -7.128 -7.335 -0.047 -5.749 -4.598 -4.431 -4.390 -0.699 -3.249 -4.915 1.086 -3.971 -4.391 -0.498 -4.744 -2.317 3.492 -4.732 -0.915 -3.170 ML 58 56 6 61 4 1 5 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 3 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 2 65 85 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 7 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 6 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 10 - C - - - ML 63 62 6 65 3 1 7 64 83 -8.132 -0.018 -6.786 -2.154 1.719 -2.985 -1.485 D 64 62 6 65 3 0 1 62 82 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 6 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - A - - - ML 66 65 3 68 3 1 6 63 82 -8.132 -0.018 -6.786 1.783 -2.712 -2.310 -2.289 D 67 65 3 68 3 0 1 61 81 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 65 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 12 - G - - - ML 69 68 3 71 3 1 6 61 81 -8.132 -0.018 -6.786 -1.936 -3.208 1.793 -2.595 D 70 68 3 71 3 0 0 60 80 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 13 - U - - - ML 72 71 3 74 3 1 5 60 80 -8.132 -0.018 -6.786 -1.802 -1.744 -2.550 1.698 D 73 71 3 74 3 0 0 59 79 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 4 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - A - - - ML 75 74 3 77 3 1 4 59 79 -8.512 -0.017 -6.830 1.783 -2.712 -2.310 -2.289 D 76 74 3 77 3 0 0 58 77 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 2 60 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 58 - G - - MR 78 77 3 80 3 1 3 58 78 -8.512 -0.017 -6.830 -1.936 -3.208 1.793 -2.595 D 79 77 3 80 3 0 0 57 76 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 2 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 57 - C - - MR 81 80 3 83 3 1 3 57 77 -8.512 -0.017 -6.830 -2.154 1.719 -2.985 -1.485 D 82 80 3 83 3 0 0 56 75 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 56 - G - - MR 84 83 3 86 5 1 3 56 76 -7.241 -0.035 -7.056 -7.269 -8.160 -1.936 -3.208 1.793 -2.595 D 85 83 3 86 5 0 0 55 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 15 55 C G - - MP 87 86 3 91 6 2 4 55 75 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -4.920 -4.858 -4.546 -1.060 -3.187 -4.909 3.651 -4.034 -4.610 -0.866 -4.828 -2.811 0.286 -4.964 -0.905 -3.438 ML 88 86 3 91 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 54 A U - - MP 93 92 6 97 6 2 4 53 73 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -4.103 -3.058 -4.095 3.501 -4.594 -5.690 -0.273 -4.116 -3.978 0.742 -4.541 -0.487 -0.689 -4.823 -2.212 -2.913 ML 94 92 6 97 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 53 G C - - MP 99 98 6 103 6 2 3 51 71 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -5.073 -3.254 -5.211 -0.025 -5.698 -4.820 -0.980 -5.472 -4.537 3.708 -4.852 -0.967 -1.357 -4.683 -3.036 -4.083 ML 100 98 6 103 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 52 C G - - MP 105 104 6 109 6 2 3 49 69 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -4.920 -4.858 -4.546 -1.060 -3.187 -4.909 3.651 -4.034 -4.610 -0.866 -4.828 -2.811 0.286 -4.964 -0.905 -3.438 ML 106 104 6 109 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 51 G C - - MP 111 110 6 115 4 2 2 47 67 -7.128 -7.335 -0.047 -5.749 -3.995 -2.701 -4.023 0.806 -4.774 -4.645 -0.201 -4.374 -3.927 3.171 -4.338 1.445 -0.475 -4.036 -2.176 -2.903 ML 112 110 6 115 4 1 1 48 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 47 67 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 46 66 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 49 69 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 20 - g - - - ML 117 116 6 119 3 1 1 45 64 -8.132 -0.018 -6.786 0.490 -1.618 0.832 -1.033 D 118 116 6 119 3 0 0 44 63 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 21 - u - - - ML 120 119 3 122 3 1 1 44 63 -8.512 -0.017 -6.830 -0.027 0.192 -1.190 0.524 D 121 119 3 122 3 0 0 43 62 -5.620 -0.734 -1.403 IL 122 122 3 122 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 50 - C - - MR 123 122 3 125 3 1 1 43 62 -8.512 -0.017 -6.830 -1.111 1.172 -1.947 0.036 D 124 122 3 125 3 0 0 41 60 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 49 - u - - MR 126 125 3 128 3 1 1 42 61 -8.512 -0.017 -6.830 -0.859 0.259 -1.638 0.949 D 127 125 3 128 3 0 0 40 59 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 48 - u - - MR 129 128 3 131 5 1 1 41 60 -7.241 -0.035 -7.056 -7.269 -8.160 0.114 -0.905 0.120 0.375 D 130 128 3 131 5 0 0 39 59 -5.352 -0.707 -2.978 -4.409 -2.404 IR 131 131 3 131 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 22 47 g c - - MP 132 131 3 136 6 2 2 40 59 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -2.584 -2.115 -2.722 1.852 -2.891 -3.505 0.875 -3.046 -2.767 2.173 -0.237 0.684 0.646 -2.819 -0.831 -1.816 ML 133 131 3 136 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 3 136 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 3 136 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 23 46 g c - - MP 138 137 6 142 6 2 2 38 57 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -3.488 -2.763 -3.478 0.833 -3.279 -4.165 1.131 -3.602 -3.550 2.721 -3.977 -0.521 1.680 -3.540 -0.881 -2.408 ML 139 137 6 142 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 24 45 c g - - MP 144 143 6 148 6 2 2 36 55 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -3.974 -3.975 -3.779 -0.252 -2.608 -4.271 2.914 -3.364 -3.805 -0.065 -4.151 -2.023 0.978 -4.081 1.845 -2.674 ML 145 143 6 148 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 25 44 a u - - MP 150 149 6 154 6 2 2 34 53 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -2.889 -2.347 -2.981 2.248 -3.153 -3.885 0.832 -3.268 -3.042 2.125 -3.549 -0.174 0.561 -3.135 -0.980 0.234 ML 151 149 6 154 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 32 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 26 43 c g - - MP 156 155 6 160 6 2 2 32 51 -9.179 -9.118 -0.020 -7.895 -8.174 -8.569 -3.680 -3.644 -3.592 0.093 -2.571 -4.197 2.824 -3.269 -3.595 0.291 -4.006 -1.643 1.738 -3.841 1.009 -2.476 ML 157 155 6 160 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 29 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 27 42 C G - - MP 162 161 6 166 4 2 2 30 49 -7.128 -7.335 -0.047 -5.749 -4.920 -4.858 -4.546 -1.060 -3.187 -4.909 3.651 -4.034 -4.610 -0.866 -4.828 -2.811 0.286 -4.964 -0.905 -3.438 ML 163 161 6 166 4 1 1 30 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 28 - u - - - ML 168 167 6 170 3 1 1 27 46 -8.132 -0.018 -6.786 0.102 -0.284 -0.438 0.452 D 169 167 6 170 3 0 0 26 45 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 29 - c - - - ML 171 170 3 173 3 1 1 26 45 -8.132 -0.383 -2.124 -0.885 0.771 -1.696 0.530 D 172 170 3 173 3 0 0 25 44 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 30 - u - - - ML 174 173 3 176 3 1 1 25 44 -7.773 -0.024 -6.427 0.215 -0.740 -1.028 0.807 D 175 173 3 176 3 0 0 23 42 -7.892 -3.405 -0.150 IL 176 176 3 176 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 31 - a - - - ML 177 176 3 179 3 1 1 24 43 -7.773 -0.024 -6.427 0.820 -0.857 -0.963 0.226 D 178 176 3 179 3 0 0 22 41 -7.892 -3.405 -0.150 IL 179 179 3 179 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - a - - - ML 180 179 3 182 3 1 1 23 42 -7.773 -0.024 -6.427 0.820 -0.857 -0.963 0.226 D 181 179 3 182 3 0 0 21 40 -7.892 -3.405 -0.150 IL 182 182 3 182 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - g - - - ML 183 182 3 185 3 1 1 22 40 -2.662 -0.268 -6.427 0.372 -1.322 0.765 -0.721 D 184 182 3 185 3 0 0 20 38 -7.892 -0.339 -2.283 IL 185 185 3 185 3 1 1 22 41 -1.834 -0.564 -4.534 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - a - - - ML 186 185 3 188 3 1 1 20 39 -8.132 -0.018 -6.786 0.467 -1.005 0.183 -0.023 D 187 185 3 188 3 0 0 19 38 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - C - - - ML 189 188 3 191 3 1 1 19 37 -8.132 -0.018 -6.786 -2.154 1.719 -2.985 -1.485 D 190 188 3 191 3 0 0 18 37 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - u - - - ML 192 191 3 194 3 1 1 17 36 -8.132 -0.018 -6.786 0.069 0.069 -0.383 0.183 D 193 191 3 194 3 0 0 17 36 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - c - - - ML 195 194 3 197 3 1 1 16 35 -8.132 -0.018 -6.786 -0.493 0.565 0.070 -0.395 D 196 194 3 197 3 0 0 16 34 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - a - - - ML 198 197 3 200 3 1 1 15 33 -8.132 -0.018 -6.786 0.378 0.148 -1.105 0.174 D 199 197 3 200 3 0 0 15 33 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - a - - - ML 201 200 3 203 3 1 1 13 31 -8.132 -0.018 -6.786 0.957 -1.538 0.267 -0.969 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - U - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 -1.802 -1.744 -2.550 1.698 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB11Cs5H2 ACC RF01543 DESC Trypanosomatid snoRNA TB11Cs5H2 LENG 68 MAXL 150 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:07 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 5 EFFN 3.413086 CKSUM 3320576986 STATS LOCAL MSV -8.2447 0.71909 STATS LOCAL VITERBI -9.0082 0.71909 STATS LOCAL FORWARD -3.4696 0.71909 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.43409 1.34689 1.22333 1.57324 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 0.00000 * 1 0.09534 3.69421 3.37639 3.44519 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 2 0.71025 1.32619 2.39458 1.88532 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 3 2.88575 3.69222 0.11338 3.63204 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 4 3.68019 0.14856 3.50655 2.49094 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 5 0.77139 2.19364 2.30325 1.12029 5 a - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 6 2.20768 3.04823 0.23948 2.89027 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 7 3.66392 0.14964 3.49782 2.48786 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 8 0.19702 3.35088 2.25231 3.25398 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 9 3.52115 2.33486 3.33112 0.17691 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 10 3.39220 0.11816 3.95532 2.83601 10 C - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 11 0.09534 3.69421 3.37639 3.44519 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 12 3.15225 4.08418 0.08941 3.65208 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 13 3.04486 2.93709 3.57631 0.13766 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 14 0.09534 3.69421 3.37639 3.44519 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 15 3.68059 0.14853 3.50677 2.49102 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 16 0.19636 3.35580 2.25351 3.26049 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 17 2.88477 3.69086 0.11354 3.63019 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 18 3.67618 0.14882 3.50441 2.49019 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 19 2.21740 3.05686 0.23686 2.90099 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 20 1.02675 2.73521 0.73190 2.34389 20 g - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 21 1.43242 1.19993 2.32460 1.01547 21 u - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 22 1.27481 2.20433 0.73500 2.03497 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 23 2.12892 2.05326 0.70218 1.35785 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 24 3.02562 0.65075 2.82639 0.99265 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 25 1.00016 2.29635 1.09442 1.62547 25 a - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 26 2.67187 0.71827 2.44594 1.03103 26 c - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 27 3.67212 0.14909 3.50223 2.48942 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 28 1.32494 1.58426 1.68815 1.06647 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 29 2.20605 0.76454 2.79469 1.01284 29 c - - _ 1.38629 1.38629 1.38629 1.38629 0.33219 4.10628 1.32359 1.46634 0.26236 1.09861 0.40547 30 1.24483 1.98825 2.20103 0.76704 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04489 3.81899 3.81899 1.46634 0.26236 2.89936 0.05663 31 0.76864 2.06352 2.14823 1.22874 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04489 3.81899 3.81899 1.46634 0.26236 2.89936 0.05663 32 0.76864 2.06352 2.14823 1.22874 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04489 3.81899 3.81899 1.46634 0.26236 2.89936 0.05663 33 1.12715 2.46145 0.77178 2.05149 33 g - - _ 1.38629 1.38629 1.38629 1.38629 0.25435 1.59637 3.81899 0.20413 1.68931 0.11667 2.20621 34 1.04973 2.17974 1.21585 1.42528 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 35 3.39220 0.11816 3.95532 2.83601 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 36 1.35940 1.29828 1.64705 1.28169 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 37 1.89621 0.89330 1.28332 1.81128 38 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 38 1.10983 1.23430 2.25875 1.29147 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 39 0.66351 2.67966 1.15182 2.29946 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 40 3.04486 2.93709 3.57631 0.13766 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 41 2.76992 3.66794 0.12813 3.44002 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 42 1.49093 2.61557 0.48702 2.43891 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 43 2.38248 1.22781 2.10321 0.70789 44 u - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 44 2.17224 2.98827 0.25602 2.78753 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 45 1.47297 0.76763 1.88275 1.86774 46 c - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 46 2.27056 1.16050 1.61399 0.95627 47 u - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 47 1.32456 2.10501 1.25918 1.11368 48 u - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 48 2.18204 1.15733 2.73874 0.67685 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 49 2.41409 0.47750 3.02211 1.42079 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 50 3.12979 0.50941 2.86833 1.20855 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 51 2.77238 3.67180 0.12768 3.44437 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 52 3.81509 0.13593 3.53996 2.57642 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 53 3.48983 2.60204 3.16667 0.15873 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 54 2.78051 3.68458 0.12622 3.45879 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 55 3.15225 4.08418 0.08941 3.65208 56 G - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 56 3.39220 0.11816 3.95532 2.83601 57 C - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 57 3.15225 4.08418 0.08941 3.65208 58 G - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 58 0.20113 3.51871 2.16990 3.26047 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 59 3.45763 2.59665 3.15243 0.16108 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 60 2.75756 3.64865 0.13038 3.41832 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 61 3.09008 0.52471 2.84834 1.18798 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.33219 1.32359 4.10628 0.11946 2.18394 1.09861 0.40547 62 1.02675 2.73521 0.73190 2.34389 64 g - - - 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 63 2.77681 3.67876 0.12689 3.45222 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 64 3.83584 0.13475 3.54988 2.58021 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 65 1.02675 2.73521 0.73190 2.34389 67 g - - : 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 66 0.09534 3.69421 3.37639 3.44519 68 A - - : 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 67 3.15225 4.08418 0.08941 3.65208 69 G - - : 1.38629 1.38629 1.38629 1.38629 0.03349 4.10628 4.10628 1.46634 0.26236 1.09861 0.40547 68 0.09534 3.69421 3.37639 3.44519 70 A - - : 1.38629 1.38629 1.38629 1.38629 0.01689 4.08968 * 1.46634 0.26236 0.00000 * //