INFERNAL1/a [1.1.4 | Dec 2020] NAME TB10Cs5H3 ACC RF01536 DESC Trypanosomatid snoRNA TB10Cs5H3 STATES 214 NODES 60 CLEN 70 W 93 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:26:50 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 3.045410 CKSUM 2785913062 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 46.00 NC 40.70 EFP7GF -10.6833 0.71892 ECMLC 0.60825 -6.51605 3.07615 1600000 410239 0.002925 ECMGC 0.38844 -17.02382 -3.16872 1600000 86974 0.004599 ECMLI 0.60637 -4.90872 4.14585 1600000 290833 0.004126 ECMGI 0.42864 -11.77864 0.16185 1600000 66811 0.005987 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 93 121 -7.345 -7.552 -0.040 -5.966 IL 1 1 2 1 4 1 27 96 124 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 95 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 1 26 93 121 -8.336 -0.016 -6.991 0.810 -1.162 -0.092 -0.214 D 4 2 3 5 3 0 21 91 119 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 26 94 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 26 92 120 -8.336 -0.016 -6.991 1.840 -3.124 -2.683 -2.744 D 7 5 3 8 3 0 20 90 119 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 25 93 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 25 91 119 -8.705 -0.015 -7.023 1.840 -3.124 -2.683 -2.744 D 10 8 3 11 3 0 19 89 118 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 23 91 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 75 - a - - MR 12 11 3 14 3 1 24 90 118 -8.705 -0.015 -7.023 0.924 -1.745 0.447 -1.181 D 13 11 3 14 3 0 17 88 116 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 23 90 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 74 - a - - MR 15 14 3 17 3 1 23 89 117 -8.705 -0.015 -7.023 0.848 -1.750 0.548 -1.182 D 16 14 3 17 3 0 17 87 115 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 22 89 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 73 - A - - MR 18 17 3 20 3 1 23 88 116 -8.705 -0.015 -7.023 1.840 -3.124 -2.683 -2.744 D 19 17 3 20 3 0 16 86 114 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 21 88 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 72 - G - - MR 21 20 3 23 3 1 22 87 115 -8.705 -0.015 -7.023 -2.349 -3.672 1.850 -3.054 D 22 20 3 23 3 0 15 85 113 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 20 87 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 71 - A - - MR 24 23 3 26 3 1 22 86 114 -8.705 -0.015 -7.023 1.840 -3.124 -2.683 -2.744 D 25 23 3 26 3 0 14 84 113 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 19 86 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 70 - a - - MR 27 26 3 29 5 1 21 85 113 -7.423 -0.031 -7.239 -7.451 -8.342 0.941 -1.745 0.423 -1.182 D 28 26 3 29 5 0 13 83 112 -5.352 -0.707 -2.978 -4.409 -2.404 IR 29 29 3 29 5 1 18 85 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 4 69 C G - - MP 30 29 3 34 6 2 22 84 112 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -5.378 -5.353 -4.920 -1.531 -3.482 -5.222 3.743 -4.375 -5.010 -1.383 -5.169 -3.325 -0.068 -5.389 -1.222 -3.827 ML 31 29 3 34 6 1 15 82 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 3 34 6 1 15 82 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 3 34 6 0 10 79 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 17 83 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 17 83 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 68 g c - - MP 36 35 6 40 6 2 21 82 110 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -3.286 -2.476 -3.322 0.957 -3.712 -3.984 0.405 -3.750 -3.450 2.866 -3.869 0.474 0.154 0.697 -1.421 -2.373 ML 37 35 6 40 6 1 15 80 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 14 80 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 10 77 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 16 81 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 17 81 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 67 g c - - MP 42 41 6 46 6 2 20 80 108 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -3.859 -2.692 -3.864 2.327 -4.560 -4.724 -0.030 -4.202 -3.874 2.880 -4.315 -0.268 -0.313 -3.987 -1.996 -2.744 ML 43 41 6 46 6 1 14 78 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 14 78 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 9 75 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 16 79 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 16 79 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 7 66 c g - - MP 48 47 6 52 6 2 19 78 106 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -2.653 -2.561 -2.769 0.787 -2.477 -3.558 2.298 -2.914 -2.820 1.647 -3.335 -0.739 1.129 0.341 -0.353 -1.852 ML 49 47 6 52 6 1 14 76 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 13 76 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 9 73 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 15 77 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 15 77 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 8 65 A U - - MP 54 53 6 58 6 2 18 76 104 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -4.503 -3.374 -4.445 3.650 -5.174 -6.328 -0.825 -4.437 -4.336 0.305 -4.917 -0.753 -1.237 -5.376 -2.762 -3.257 ML 55 53 6 58 6 1 13 74 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 12 74 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 8 72 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 14 75 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 15 75 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 9 64 A U - - MP 60 59 6 64 6 2 16 74 102 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -4.503 -3.374 -4.445 3.650 -5.174 -6.328 -0.825 -4.437 -4.336 0.305 -4.917 -0.753 -1.237 -5.376 -2.762 -3.257 ML 61 59 6 64 6 1 12 73 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 11 72 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 8 70 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 14 73 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 13 73 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 10 63 C G - - MP 66 65 6 70 4 2 14 72 100 -7.345 -7.552 -0.040 -5.966 -3.925 -3.926 -3.796 -0.289 -2.743 -4.344 3.204 0.650 -3.817 -0.147 -4.195 -2.011 0.833 -4.079 -0.457 -2.724 ML 67 65 6 70 4 1 11 71 100 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 9 71 99 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 8 70 98 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 13 73 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 12 72 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 11 - U - - - ML 72 71 6 74 3 1 13 70 98 -8.336 -0.016 -6.991 -2.194 -2.071 -2.955 1.772 D 73 71 6 74 3 0 7 68 96 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 12 71 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 12 - C - - - ML 75 74 3 77 3 1 12 69 97 -8.336 -0.016 -6.991 -2.650 1.799 -3.474 -1.889 D 76 74 3 77 3 0 6 67 95 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 11 70 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 13 - U - - - ML 78 77 3 80 3 1 11 68 96 -8.336 -0.016 -6.991 -2.194 -2.071 -2.955 1.772 D 79 77 3 80 3 0 6 66 94 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 69 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 14 - C - - - ML 81 80 3 83 3 1 10 67 95 -8.336 -0.016 -6.991 -2.650 1.799 -3.474 -1.889 D 82 80 3 83 3 0 5 65 94 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 9 68 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - U - - - ML 84 83 3 86 3 1 10 66 94 -8.705 -0.015 -7.023 -2.194 -2.071 -2.955 1.772 D 85 83 3 86 3 0 4 64 93 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 8 66 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 62 - a - - MR 87 86 3 89 3 1 9 65 93 -8.705 -0.015 -7.023 0.441 -1.109 0.290 -0.065 D 88 86 3 89 3 0 3 63 91 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 7 65 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 61 - C - - MR 90 89 3 92 3 1 8 64 92 -8.705 -0.015 -7.023 -2.650 1.799 -3.474 -1.889 D 91 89 3 92 3 0 3 62 90 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 7 64 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 60 - U - - MR 93 92 3 95 3 1 8 63 91 -8.705 -0.015 -7.023 -2.194 -2.071 -2.955 1.772 D 94 92 3 95 3 0 2 61 89 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 6 63 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 59 - A - - MR 96 95 3 98 3 1 7 62 90 -8.705 -0.015 -7.023 1.840 -3.124 -2.683 -2.744 D 97 95 3 98 3 0 2 60 88 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 5 62 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 58 - C - - MR 99 98 3 101 3 1 7 61 89 -8.705 -0.015 -7.023 -2.650 1.799 -3.474 -1.889 D 100 98 3 101 3 0 2 59 88 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 5 61 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 57 - U - - MR 102 101 3 104 5 1 6 60 88 -7.423 -0.031 -7.239 -7.451 -8.342 -2.194 -2.071 -2.955 1.772 D 103 101 3 104 5 0 2 58 87 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 4 60 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 16 56 G C - - MP 105 104 3 109 6 2 7 59 87 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -5.465 -3.447 -5.670 -0.304 -6.241 -4.964 -1.425 -5.937 -4.768 3.772 -5.060 -1.183 -1.794 -4.932 -3.508 -4.537 ML 106 104 3 109 6 1 3 57 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 3 57 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 55 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 4 58 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 4 58 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 17 55 G C - - MP 111 110 6 115 6 2 6 57 85 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -5.465 -3.447 -5.670 -0.304 -6.241 -4.964 -1.425 -5.937 -4.768 3.772 -5.060 -1.183 -1.794 -4.932 -3.508 -4.537 ML 112 110 6 115 6 1 3 56 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 2 55 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 53 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 3 56 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 3 56 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 18 54 A U - - MP 117 116 6 121 4 2 5 55 83 -7.345 -7.552 -0.040 -5.966 -3.935 -2.835 -4.034 3.321 -4.961 -5.745 -0.656 -4.169 -3.840 0.959 -4.431 1.027 -0.866 -4.699 -2.546 -2.811 ML 118 116 6 121 4 1 2 54 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 54 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 53 81 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 3 55 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 3 55 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 19 - U - - - ML 123 122 6 125 3 1 4 53 81 -8.336 -0.016 -6.991 0.029 -1.097 -1.459 1.103 D 124 122 6 125 3 0 0 51 79 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 3 54 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 20 - u - - - ML 126 125 3 128 3 1 3 52 80 -8.336 -0.016 -6.991 0.236 -0.217 -0.405 0.271 D 127 125 3 128 3 0 0 50 78 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 2 53 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 21 - C - - - ML 129 128 3 131 3 1 3 51 79 -8.336 -0.016 -6.991 -2.650 1.799 -3.474 -1.889 D 130 128 3 131 3 0 0 48 77 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 2 52 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 22 - c - - - ML 132 131 3 134 3 1 3 50 78 -3.026 -0.202 -6.991 -0.107 0.525 -1.368 0.316 D 133 131 3 134 3 0 0 45 74 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 2 52 80 -0.935 -1.153 -5.198 0.000 0.000 0.000 0.000 [ MATL 35 ] 26 - U - - - ML 135 134 3 137 3 1 2 41 60 -8.336 -0.016 -6.991 -1.126 -0.033 -1.901 1.199 D 136 134 3 137 3 0 0 40 59 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 27 - c - - - ML 138 137 3 140 3 1 2 40 59 -8.705 -0.015 -7.023 0.143 0.391 -1.276 0.229 D 139 137 3 140 3 0 0 39 58 -5.620 -0.734 -1.403 IL 140 140 3 140 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 53 - a - - MR 141 140 3 143 3 1 2 39 58 -8.705 -0.015 -7.023 0.646 -0.322 -1.145 0.243 D 142 140 3 143 3 0 0 37 57 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 52 - a - - MR 144 143 3 146 3 1 1 38 57 -8.705 -0.015 -7.023 0.587 -1.002 -0.205 0.177 D 145 143 3 146 3 0 0 36 55 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 51 - c - - MR 147 146 3 149 3 1 1 37 56 -1.819 -0.496 -7.023 -0.526 0.556 -0.267 0.006 D 148 146 3 149 3 0 0 35 54 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 1 37 56 -3.043 -0.229 -5.281 0.000 0.000 0.000 0.000 [ MATR 40 ] - 49 - G - - MR 150 149 3 152 3 1 1 36 55 -8.705 -0.015 -7.023 -2.349 -3.672 1.850 -3.054 D 151 149 3 152 3 0 0 34 53 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 48 - U - - MR 153 152 3 155 3 1 1 35 54 -8.705 -0.015 -7.023 -2.194 -2.071 -2.955 1.772 D 154 152 3 155 3 0 0 33 52 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 47 - G - - MR 156 155 3 158 3 1 1 34 53 -8.705 -0.136 -3.512 0.152 -1.986 1.178 -1.418 D 157 155 3 158 3 0 0 32 51 -6.390 -1.568 -0.620 IR 158 158 3 158 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 46 - g - - MR 159 158 3 161 5 1 1 33 52 -7.310 -0.034 -7.125 -7.337 -8.229 0.639 -1.651 0.721 -1.071 D 160 158 3 161 5 0 0 32 51 -5.914 -0.439 -3.540 -4.971 -2.966 IR 161 161 3 161 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 28 45 g c - - MP 162 161 3 166 6 2 2 32 51 -9.272 -9.211 -0.019 -7.988 -8.268 -8.663 -3.421 -2.913 -3.417 0.743 -2.999 -4.140 1.815 -3.448 -3.500 2.411 -3.945 -0.731 1.679 -3.504 -0.617 -2.335 ML 163 161 3 166 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 3 166 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 3 166 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 29 44 g c - - MP 168 167 6 172 4 2 2 30 49 -7.345 -7.552 -0.040 -5.966 -3.026 -2.450 -3.101 1.758 -3.278 -3.964 0.757 0.562 -3.188 2.497 -3.678 -0.277 0.476 -3.224 -1.073 -2.135 ML 169 167 6 172 4 1 1 30 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 30 - G - - - ML 174 173 6 176 3 1 1 27 46 -8.336 -0.016 -6.991 -0.729 -0.440 1.089 -0.911 D 175 173 6 176 3 0 0 26 45 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 31 - C - - - ML 177 176 3 179 3 1 1 26 45 -8.336 -0.016 -6.991 -1.214 1.115 -2.070 0.221 D 178 176 3 179 3 0 0 25 44 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 32 - c - - - ML 180 179 3 182 3 1 1 25 44 -8.336 -0.016 -6.991 -0.320 0.835 -1.546 0.101 D 181 179 3 182 3 0 0 24 43 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 33 - a - - - ML 183 182 3 185 3 1 1 24 42 -8.336 -0.016 -6.991 0.494 -0.474 -0.557 0.253 D 184 182 3 185 3 0 0 23 42 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 34 - u - - - ML 186 185 3 188 3 1 1 23 41 -8.336 -0.016 -6.991 -1.028 0.540 -1.839 0.829 D 187 185 3 188 3 0 0 22 41 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 35 - U - - - ML 189 188 3 191 3 1 1 21 40 -8.336 -0.016 -6.991 -2.194 -2.071 -2.955 1.772 D 190 188 3 191 3 0 0 21 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 36 - U - - - ML 192 191 3 194 3 1 1 20 39 -8.336 -0.016 -6.991 -1.370 -0.670 -2.122 1.462 D 193 191 3 194 3 0 0 20 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 37 - u - - - ML 195 194 3 197 3 1 1 19 38 -8.336 -0.152 -3.369 0.250 0.198 -1.214 0.301 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 38 - U - - - ML 198 197 3 200 3 1 1 18 36 -8.202 -0.017 -6.856 -0.413 -1.128 -1.610 1.301 D 199 197 3 200 3 0 0 17 35 -7.220 -2.733 -0.247 IL 200 200 3 200 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 39 - c - - - ML 201 200 3 203 3 1 1 16 35 -1.735 -1.305 -1.762 -0.955 0.819 -1.776 0.514 D 202 200 3 203 3 0 0 14 33 -7.220 -0.586 -1.612 IL 203 203 3 203 3 1 1 16 35 -2.300 -0.385 -5.001 0.000 0.000 0.000 0.000 [ MATL 56 ] 41 - u - - - ML 204 203 3 206 3 1 1 15 33 -7.900 -0.022 -6.554 0.084 0.016 -1.043 0.530 D 205 203 3 206 3 0 0 14 32 -8.217 -0.264 -2.609 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 42 - U - - - ML 207 206 3 209 3 1 1 13 31 -8.336 -0.016 -6.991 -2.194 -2.071 -2.955 1.772 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 43 - c - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 -0.810 0.980 -0.333 -0.590 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 59 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB10Cs5H3 ACC RF01536 DESC Trypanosomatid snoRNA TB10Cs5H3 LENG 70 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:26:50 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 7 EFFN 4.016113 CKSUM 2785913062 STATS LOCAL MSV -7.6680 0.71892 STATS LOCAL VITERBI -9.0250 0.71892 STATS LOCAL FORWARD -3.3807 0.71892 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.44132 1.35425 1.55004 1.22757 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 0.00000 * 1 0.79261 2.28676 1.43721 1.56948 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 2 0.07672 3.90171 3.56745 3.67237 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 3 0.07672 3.90171 3.56745 3.67237 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 4 3.91203 0.11832 3.76058 2.68352 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 5 2.03962 2.57404 0.53903 1.55883 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 6 1.02919 2.87684 0.65238 2.72438 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 7 2.10997 1.02952 1.44095 1.25570 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 8 0.15346 3.62512 2.45567 3.51286 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 9 0.15356 3.62413 2.45542 3.51158 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 10 3.05218 0.27711 2.86534 1.98188 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 11 3.24714 3.10810 3.78324 0.11241 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 12 3.63151 0.09393 4.17648 3.04012 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 13 3.24714 3.10810 3.78324 0.11241 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 14 3.63151 0.09393 4.17648 3.04012 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 15 3.24714 3.10810 3.78324 0.11241 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 16 3.02764 3.89101 0.09481 3.83490 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 17 3.02683 3.88981 0.09492 3.83328 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 18 0.36255 3.46345 1.45867 3.21305 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 19 1.38214 2.28464 2.54121 0.56497 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 20 1.22245 1.52958 1.66736 1.20357 20 u - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 21 3.63151 0.09393 4.17648 3.04012 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 22 1.49276 0.96322 2.45332 1.17902 22 c - - - 1.38629 1.38629 1.38629 1.38629 0.17500 1.92324 4.23999 1.12562 0.39223 1.09861 0.40547 23 2.36334 1.39833 2.91039 0.50347 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 24 1.29549 1.06362 2.37497 1.24475 27 c - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 25 2.15316 1.45263 0.94462 1.34285 28 g - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 26 1.39399 1.57872 0.82945 2.21285 29 g - - < 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 27 2.06889 1.69039 0.54310 2.22300 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 28 2.43153 0.54528 3.04936 1.25517 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 29 1.66692 0.73904 2.60728 1.34759 32 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 30 1.02670 1.73124 1.78720 1.21295 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 31 2.27835 0.95786 2.85864 0.78420 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 32 3.24714 3.10810 3.78324 0.11241 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 33 2.56434 1.90943 3.08964 0.31561 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 34 1.21018 1.20921 2.31962 1.18708 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.13552 4.23999 2.18631 1.46634 0.26236 1.09861 0.40547 35 1.74544 2.32120 2.67641 0.41784 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03246 4.13694 4.13694 1.46634 0.26236 2.28203 0.10767 36 2.21612 0.74977 2.80653 1.02701 39 c - - _ 1.38629 1.38629 1.38629 1.38629 1.14120 1.06055 1.09571 0.08983 2.45444 0.22835 1.58888 37 1.33839 1.34678 2.17606 1.01013 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04126 3.90150 3.90150 1.46634 0.26236 0.09126 2.43934 38 3.24714 3.10810 3.78324 0.11241 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 39 2.14589 0.60909 1.61814 1.95954 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 40 2.45256 0.92193 2.15802 0.91474 44 u - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 41 1.48916 1.01474 1.32816 1.91749 45 c - - > 1.38629 1.38629 1.38629 1.38629 0.12964 4.23999 2.23325 1.46634 0.26236 1.09861 0.40547 42 0.91583 2.71540 0.83049 2.32483 46 g - - - 1.38629 1.38629 1.38629 1.38629 0.03228 4.14263 4.14263 1.46634 0.26236 0.23811 1.55170 43 1.29405 2.97265 0.51067 2.59587 47 G - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 44 3.24714 3.10810 3.78324 0.11241 48 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 45 3.34794 4.29928 0.07241 3.85776 49 G - - - 1.38629 1.38629 1.38629 1.38629 0.43839 1.07728 4.23999 0.08257 2.53506 1.09861 0.40547 46 1.85902 0.93611 1.55517 1.42350 51 c - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 47 0.95812 2.15982 1.52203 1.26312 52 a - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 48 0.90798 1.61250 2.26366 1.22654 53 a - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 49 3.41508 2.28250 3.24935 0.19080 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 50 4.01247 0.11402 3.74996 2.71574 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 51 4.02824 0.11329 3.75772 2.71856 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 52 3.24714 3.10810 3.78324 0.11241 57 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 53 3.63151 0.09393 4.17648 3.04012 58 C - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 54 0.07672 3.90171 3.56745 3.67237 59 A - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 55 3.24714 3.10810 3.78324 0.11241 60 U - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 56 3.63151 0.09393 4.17648 3.04012 61 C - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 57 1.07244 2.24442 1.14631 1.45230 62 a - - - 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 58 2.25766 3.03246 0.39443 1.75361 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 59 3.72439 2.82370 3.42941 0.12321 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 60 3.72750 2.82426 3.43086 0.12303 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 61 1.87862 1.19106 0.93332 1.89675 66 g - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 62 2.96566 0.73041 2.68524 0.91991 67 c - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 63 2.67183 0.47315 2.38390 1.53411 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 64 2.97543 3.93930 0.10010 3.69817 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 65 0.68919 2.80822 1.04982 2.43378 70 A - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 66 0.07672 3.90171 3.56745 3.67237 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 67 3.34794 4.29928 0.07241 3.85776 72 G - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 68 0.07672 3.90171 3.56745 3.67237 73 A - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 69 0.75809 2.80980 0.95896 2.43120 74 a - - : 1.38629 1.38629 1.38629 1.38629 0.02924 4.23999 4.23999 1.46634 0.26236 1.09861 0.40547 70 0.70171 2.80801 1.03245 2.43266 75 a - - : 1.38629 1.38629 1.38629 1.38629 0.01473 4.22548 * 1.46634 0.26236 0.00000 * //