INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs4H3 ACC RF01533 DESC Trypanosomatid snoRNA TB10Cs4H3 STATES 205 NODES 52 CLEN 67 W 83 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 15:43:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01533/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.334961 CKSUM 110742198 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 46.20 NC 37.60 EFP7GF -7.8238 0.72164 ECMLC 0.59018 -7.53715 2.32715 1600000 405051 0.002963 ECMGC 0.43113 -16.57361 -3.66892 1600000 104302 0.003835 ECMLI 0.60020 -5.38163 3.79750 1600000 296385 0.004049 ECMGI 0.45511 -12.14686 -0.46804 1600000 81362 0.004916 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 83 102 -7.105 -7.312 -0.048 -5.726 IL 1 1 2 1 4 1 20 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 20 83 103 -8.111 -0.019 -6.765 -1.891 -3.157 1.785 -2.545 D 4 2 3 5 3 0 15 81 101 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 19 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 19 82 101 -8.492 -0.017 -6.810 1.776 -2.669 -2.271 -2.241 D 7 5 3 8 3 0 14 80 100 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 18 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 70 - U - - MR 9 8 3 11 3 1 18 81 100 -8.492 -0.017 -6.810 -1.761 -1.710 -2.508 1.689 D 10 8 3 11 3 0 12 79 99 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 17 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 69 - A - - MR 12 11 3 14 3 1 17 80 99 -8.492 -0.017 -6.810 1.776 -2.669 -2.271 -2.241 D 13 11 3 14 3 0 11 78 98 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 16 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 68 - G - - MR 15 14 3 17 3 1 16 79 98 -8.492 -0.017 -6.810 -1.891 -3.157 1.785 -2.545 D 16 14 3 17 3 0 10 77 97 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 15 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 67 - A - - MR 18 17 3 20 3 1 16 78 97 -8.492 -0.017 -6.810 1.776 -2.669 -2.271 -2.241 D 19 17 3 20 3 0 9 76 96 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 14 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 66 - G - - MR 21 20 3 23 5 1 15 77 96 -7.222 -0.036 -7.038 -7.250 -8.141 -1.891 -3.157 1.785 -2.545 D 22 20 3 23 5 0 8 75 95 -5.352 -0.707 -2.978 -4.409 -2.404 IR 23 23 3 23 5 1 12 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 65 C G - - MP 24 23 3 28 6 2 15 76 95 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -4.873 -4.807 -4.507 -1.012 -3.158 -4.876 3.640 -4.000 -4.569 -0.813 -4.793 -2.759 0.322 -4.920 -0.874 -3.398 ML 25 23 3 28 6 1 9 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 3 28 6 1 9 74 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 3 28 6 0 5 72 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 11 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 12 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 4 64 G C - - MP 30 29 6 34 6 2 13 74 93 -9.170 -3.530 -0.150 -7.885 -8.165 -8.560 -5.032 -3.234 -5.164 0.003 -5.640 -4.805 -0.932 -5.423 -4.512 3.701 -4.829 -0.945 -1.310 -4.657 -2.986 -4.036 ML 31 29 6 34 6 1 8 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 9 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 4 70 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 10 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 11 73 92 -3.019 -0.305 -6.530 -4.698 -5.804 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 62 c g - - MP 36 35 6 40 6 2 11 72 91 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -3.945 -3.939 -3.755 -0.212 -2.591 -4.254 2.964 -3.344 -3.779 -0.021 -4.129 -1.979 1.004 -4.054 1.686 -2.648 ML 37 35 6 40 6 1 7 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 8 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 4 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 9 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 9 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 61 C G - - MP 42 41 6 46 4 2 9 70 89 -7.009 -8.255 -0.073 -4.708 -4.873 -4.807 -4.507 -1.012 -3.158 -4.876 3.640 -4.000 -4.569 -0.813 -4.793 -2.759 0.322 -4.920 -0.874 -3.398 ML 43 41 6 46 4 1 6 69 89 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 7 69 88 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 4 67 87 -12.737 -14.007 -2.036 -0.404 IL 46 46 5 46 4 1 7 69 89 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 1 8 69 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 60 - U - - MR 48 47 6 50 5 1 8 67 87 -7.222 -0.036 -7.038 -7.250 -8.141 -1.761 -1.710 -2.508 1.689 D 49 47 6 50 5 0 3 66 86 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 6 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 7 59 c g - - MP 51 50 3 55 4 2 8 66 86 -7.105 -7.312 -0.048 -5.726 -3.111 -3.131 1.006 0.271 -2.478 -3.821 2.821 -3.070 -3.175 0.463 -3.635 -1.351 1.021 -3.343 -0.303 -2.181 ML 52 50 3 55 4 1 4 67 87 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 4 1 3 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 3 55 4 0 2 65 85 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 6 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 5 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 8 - c - - - ML 57 56 6 59 3 1 7 64 84 -8.111 -0.019 -6.765 0.257 0.718 -1.344 -0.385 D 58 56 6 59 3 0 1 63 82 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 5 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 9 - U - - - ML 60 59 3 62 3 1 6 63 83 -8.111 -0.019 -6.765 -0.859 0.142 -1.630 1.016 D 61 59 3 62 3 0 1 62 81 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 4 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 10 - c - - - ML 63 62 3 65 3 1 6 62 82 -8.111 -0.019 -6.765 0.257 0.718 -1.344 -0.385 D 64 62 3 65 3 0 0 61 80 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 4 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 11 - C - - - ML 66 65 3 68 3 1 5 61 80 -8.111 -0.019 -6.765 -2.101 1.708 -2.932 -1.443 D 67 65 3 68 3 0 0 60 79 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 4 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 12 - A - - - ML 69 68 3 71 3 1 5 60 79 -8.111 -0.019 -6.765 1.776 -2.669 -2.271 -2.241 D 70 68 3 71 3 0 0 59 78 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 3 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 13 - A - - - ML 72 71 3 74 3 1 4 59 78 -8.111 -0.019 -6.765 1.776 -2.669 -2.271 -2.241 D 73 71 3 74 3 0 0 58 77 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 3 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 14 - C - - - ML 75 74 3 77 3 1 4 58 77 -8.111 -0.019 -6.765 -2.101 1.708 -2.932 -1.443 D 76 74 3 77 3 0 0 56 76 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 2 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - C - - - ML 78 77 3 80 3 1 3 57 76 -8.492 -0.017 -6.810 -2.101 1.708 -2.932 -1.443 D 79 77 3 80 3 0 0 55 75 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 1 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 58 - U - - MR 81 80 3 83 3 1 2 56 75 -8.492 -0.017 -6.810 -1.761 -1.710 -2.508 1.689 D 82 80 3 83 3 0 0 54 73 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 57 - a - - MR 84 83 3 86 3 1 2 55 74 -8.492 -0.017 -6.810 0.895 -1.015 -1.146 0.256 D 85 83 3 86 3 0 0 53 72 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 56 - U - - MR 87 86 3 89 3 1 2 54 73 -8.492 -0.017 -6.810 -0.866 0.107 -1.636 1.038 D 88 86 3 89 3 0 0 52 71 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 55 - A - - MR 90 89 3 92 3 1 2 53 72 -8.492 -0.017 -6.810 1.776 -2.669 -2.271 -2.241 D 91 89 3 92 3 0 0 51 70 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 54 - U - - MR 93 92 3 95 3 1 1 52 71 -8.492 -0.017 -6.810 -1.761 -1.710 -2.508 1.689 D 94 92 3 95 3 0 0 50 69 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 53 - A - - MR 96 95 3 98 3 1 1 51 70 -8.492 -0.017 -6.810 1.776 -2.669 -2.271 -2.241 D 97 95 3 98 3 0 0 49 69 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 52 - G - - MR 99 98 3 101 5 1 1 50 69 -7.222 -0.036 -7.038 -7.250 -8.141 -1.891 -3.157 1.785 -2.545 D 100 98 3 101 5 0 0 48 68 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 16 51 G U - - MP 102 101 3 106 6 2 2 49 68 -9.170 -9.109 -0.150 -3.490 -8.165 -8.560 -3.806 -2.522 -3.987 1.009 -4.858 -5.592 -0.429 -3.987 -3.604 1.098 -4.137 3.258 -0.782 -4.751 -2.371 -2.652 ML 103 101 3 106 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 48 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 17 50 C G - - MP 108 107 6 112 6 2 2 47 66 -9.042 -8.981 -0.022 -7.758 -8.037 -8.432 -4.221 -4.095 -3.964 -0.360 -2.759 -4.418 3.435 -3.536 -4.004 -0.066 -4.299 -2.039 0.785 -4.310 -0.460 -2.856 ML 109 107 6 112 6 1 1 47 67 -7.372 -7.718 -2.432 -0.378 -7.568 -5.097 -0.644 1.114 -1.401 -0.293 MR 110 107 6 112 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 18 49 c g - - MP 114 113 6 118 6 2 2 45 64 -9.042 -8.981 -0.022 -7.758 -8.037 -8.432 -3.499 -3.408 -3.394 0.298 -2.393 -3.982 2.634 -3.085 -3.412 0.595 -3.809 -1.393 2.209 -3.643 -0.076 -2.291 ML 115 113 6 118 6 1 1 47 66 -0.872 -7.718 -2.432 -2.127 -7.568 -5.097 -0.631 -0.798 -1.300 1.247 MR 116 113 6 118 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 46 66 -1.402 -4.295 -0.908 -5.950 -6.726 -6.386 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 21 48 c g - - MP 120 119 6 124 6 2 2 42 62 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -4.039 -4.062 -3.805 -0.372 -2.598 -4.259 2.518 -3.371 -3.845 -0.187 -4.167 -2.154 0.922 -4.128 2.501 -2.717 ML 121 119 6 124 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 22 47 C G - - MP 126 125 6 130 6 2 2 40 60 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -4.873 -4.807 -4.507 -1.012 -3.158 -4.876 3.640 -4.000 -4.569 -0.813 -4.793 -2.759 0.322 -4.920 -0.874 -3.398 ML 127 125 6 130 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 23 46 g c - - MP 132 131 6 136 6 2 2 38 58 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -3.141 0.797 -3.212 1.868 -3.620 -4.048 0.468 -3.561 -3.267 2.533 -3.730 -0.092 0.223 -3.321 -1.354 -2.212 ML 133 131 6 136 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 24 45 c g - - MP 138 137 6 142 6 2 2 36 56 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -3.945 -3.939 -3.755 -0.212 -2.591 -4.254 2.964 -3.344 -3.779 -0.021 -4.129 -1.979 1.004 -4.054 1.686 -2.648 ML 139 137 6 142 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 25 44 a u - - MP 144 143 6 148 4 2 2 34 54 -7.105 -7.312 -0.048 -5.726 0.995 -2.286 -2.792 2.472 -2.901 -3.779 0.804 -3.040 -2.785 1.325 -3.336 -0.188 0.556 -3.030 -0.889 -1.861 ML 145 143 6 148 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 36 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - C - - - ML 150 149 6 152 3 1 1 32 51 -8.111 -0.019 -6.765 -2.101 1.708 -2.932 -1.443 D 151 149 6 152 3 0 0 31 50 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 27 - c - - - ML 153 152 3 155 5 1 1 31 50 -7.222 -0.036 -7.038 -7.250 -8.141 -0.516 0.669 -0.081 -0.386 D 154 152 3 155 5 0 0 30 48 -4.959 -0.803 -4.221 -2.596 -2.508 IL 155 155 3 155 5 1 1 31 50 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 43 g c - - MP 156 155 3 160 6 2 2 30 49 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -2.929 -2.256 -3.030 1.149 -3.300 -3.885 0.707 -3.334 -3.069 2.345 -3.543 1.277 0.448 -3.163 -1.100 0.822 ML 157 155 3 160 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 29 42 u a - - MP 162 161 6 166 6 2 2 28 47 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -3.295 -3.357 -3.274 0.138 1.161 -3.918 1.728 -3.104 -3.305 0.255 -3.745 -1.567 2.588 -3.505 -0.228 -2.276 ML 163 161 6 166 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 30 41 G C - - MP 168 167 6 172 6 2 2 26 45 -9.170 -9.109 -0.020 -7.885 -8.165 -8.560 -4.021 -2.714 -4.047 0.783 -4.782 -4.618 -0.202 -4.406 -3.947 3.223 -4.349 1.279 -0.479 -4.029 -2.181 -2.933 ML 169 167 6 172 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 31 40 c g - - MP 174 173 6 178 4 2 2 24 43 -7.105 -7.312 -0.048 -5.726 -3.945 -3.939 -3.755 -0.212 -2.591 -4.254 2.964 -3.344 -3.779 -0.021 -4.129 -1.979 1.004 -4.054 1.686 -2.648 ML 175 173 6 178 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 177 173 6 178 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 178 178 5 178 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 179 179 6 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - U - - - ML 180 179 6 182 3 1 1 21 40 -8.111 -0.019 -6.765 -1.761 -1.710 -2.508 1.689 D 181 179 6 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - g - - - ML 183 182 3 185 3 1 1 20 39 -8.111 -0.019 -6.765 -0.540 -1.228 0.851 0.112 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - c - - - ML 186 185 3 188 3 1 1 19 37 -8.111 -0.019 -6.765 -0.908 0.882 -1.725 0.403 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - c - - - ML 189 188 3 191 3 1 1 17 36 -8.111 -0.322 -2.347 -0.530 0.704 -0.127 -0.390 D 190 188 3 191 3 0 0 17 35 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - C - - - ML 192 191 3 194 3 1 1 16 35 -7.812 -0.023 -6.466 -1.377 1.509 -2.186 -0.866 D 193 191 3 194 3 0 0 15 34 -7.719 -0.389 -2.111 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 37 - c - - - ML 195 194 3 197 3 1 1 15 33 -8.111 -0.019 -6.765 0.293 0.686 -1.328 -0.382 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 38 - a - - - ML 198 197 3 200 3 1 1 13 31 -8.111 -0.019 -6.765 0.336 -0.885 -0.053 0.302 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 39 - U - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -0.859 0.142 -1.630 1.016 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs4H3 ACC RF01533 DESC Trypanosomatid snoRNA TB10Cs4H3 LENG 67 MAXL 152 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 15:43:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01533/CM NSEQ 3 EFFN 2.762695 CKSUM 110742198 STATS LOCAL MSV -8.4637 0.72164 STATS LOCAL VITERBI -9.0762 0.72164 STATS LOCAL FORWARD -3.2097 0.72164 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.52768 1.28783 1.29841 1.45189 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.89665 3.79992 0.11859 3.37407 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.12580 3.43288 3.13837 3.15691 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.39540 0.19660 3.19386 2.26390 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.71111 3.43528 0.14266 3.37340 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.80294 0.64925 2.59086 1.07302 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.38996 0.19709 3.19112 2.26291 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 1.47834 0.72799 2.24605 1.69670 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 1.20989 0.84149 2.40157 1.71410 8 c - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.07027 1.27078 2.61183 0.65425 9 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 1.20989 0.84149 2.40157 1.71410 10 c - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.08076 0.15975 3.65565 2.57871 11 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.12580 3.43288 3.13837 3.15691 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.12580 3.43288 3.13837 3.15691 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.08076 0.15975 3.65565 2.57871 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.08076 0.15975 3.65565 2.57871 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.00993 3.09367 0.26368 2.94798 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.79967 0.33333 2.65510 1.88159 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.37314 0.92968 2.15642 0.92535 18 u - - < 1.38629 1.38629 1.38629 1.38629 0.27467 1.50985 3.95124 0.75436 0.63547 1.09861 0.40547 19 2.85496 0.98317 2.69270 0.69191 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.32921 0.20271 3.16000 2.25155 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.98657 2.39395 0.84748 2.23133 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.79549 0.65035 2.58754 1.07340 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.59253 2.20217 1.57405 2.04558 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.08076 0.15975 3.65565 2.57871 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 1.81999 0.87065 1.42619 1.71997 27 c - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 1.83063 2.25142 0.69316 1.45054 28 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.55806 1.01356 2.38190 0.76090 29 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.13803 2.89293 0.27084 2.74946 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.80671 0.64870 2.59253 1.07282 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.79309 2.72626 3.31723 0.17787 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 1.82981 2.31351 0.74851 1.31837 33 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.11052 0.73040 2.68911 1.11119 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 1.83158 0.84518 1.46145 1.72340 35 c - - _ 1.38629 1.38629 1.38629 1.38629 0.26503 3.95124 1.54372 1.46634 0.26236 1.09861 0.40547 34 2.53029 0.27807 3.09920 2.13676 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04892 3.73513 3.73513 1.46634 0.26236 0.16558 1.87995 35 1.18250 0.86497 2.38859 1.71110 37 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 1.15037 2.03741 1.41116 1.17359 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.07027 1.27078 2.61183 0.65425 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.01815 2.75367 0.31915 2.56867 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.97469 0.49399 2.70399 1.30265 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.55622 2.54511 1.37992 2.33755 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.32870 1.06549 2.05549 0.84400 43 u - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 1.41398 1.81351 2.00417 0.77876 44 u - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.01714 2.75226 0.31964 2.56692 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.46911 0.70482 2.20224 1.16930 46 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.53867 3.35466 0.17051 3.14944 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 2.08043 2.88183 0.28643 2.68602 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.27467 3.95124 1.50985 1.46634 0.26236 1.09861 0.40547 47 1.13078 2.29213 0.77244 2.16907 49 g - - > 1.38629 1.38629 1.38629 1.38629 0.04938 3.72596 3.72596 1.46634 0.26236 2.60188 0.07703 48 2.17848 2.82553 0.27589 2.67929 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04938 3.72596 3.72596 1.46634 0.26236 0.16048 1.90873 49 3.16789 2.06944 2.89466 0.25317 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 2.89665 3.79992 0.11859 3.37407 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 0.12580 3.43288 3.13837 3.15691 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 2.79309 2.72626 3.31723 0.17787 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 0.12580 3.43288 3.13837 3.15691 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 2.07607 1.29727 2.61618 0.63825 56 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 0.73959 2.14408 2.23842 1.20769 57 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.79309 2.72626 3.31723 0.17787 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 57 1.95725 2.41812 0.41006 2.24377 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 2.79309 2.72626 3.31723 0.17787 60 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 2.53714 3.35244 0.17088 3.14685 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 2.01456 2.74863 0.32091 2.56244 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.27467 1.50985 3.95124 0.16582 1.87863 1.09861 0.40547 61 3.57900 0.16901 3.27952 2.40852 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 62 2.54977 3.37083 0.16787 3.16830 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 63 2.89665 3.79992 0.11859 3.37407 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 64 0.12580 3.43288 3.13837 3.15691 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 65 2.89665 3.79992 0.11859 3.37407 68 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 66 0.12580 3.43288 3.13837 3.15691 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 67 2.79309 2.72626 3.31723 0.17787 70 U - - : 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * //