# STOCKHOLM 1.0
#=GF ID TB10Cs4H3
#=GF AC RF01533
#=GF DE Trypanosomatid snoRNA TB10Cs4H3
#=GF AU Osuch I
#=GF GA 45.0
#=GF NC 37.6
#=GF TC 46.2
#=GF SE Predicted; WAR;
#=GF SS Predicted; WAR;
#=GF TP Gene; snRNA; snoRNA; HACA-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 28.14 -Z 2958934 CM SEQDB
#=GF DR SO; 0000594; H_ACA_box_snoRNA;
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF RN [1]
#=GF RM 15840815
#=GF RT A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in
#=GF RT Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA
#=GF RT modification.
#=GF RA Liang XH, Uliel S, Hury A, Barth S, Doniger T, Unger R, Michaeli S
#=GF RL RNA. 2005;11:619-645.
#=GF WK Trypanosome_H/ACA_box_snoRNAs
#=GF SQ 3

AAHK01000005.1/22680-22614 GACGCCCCUCCAACCGCU--UCGCACCGUGCUGCCCCGUGCACUGCGGAGUGAUAUAUGUGG-CGGAGAU
FR796466.1/1224122-1224189 GACGUCACCCCAACCGCUGCUCAUACGUCGUUGCCCAUCGUAUAGCGG--UGAUAUUUGUGGACGGAGAU
FN554973.1/3266668-3266603 GACGCCCAUACAACCGCC--CCACACCGUGCUUUG-CAUGCAUUGUGGGGUGAUACAUGUGG-CGGAGAU
#=GC SS_cons               ::<<<<<--------<<<..<<<<<--<<<<________>>>>>>>>>>>>------->->>.>>:::::
#=GC RF                    GACGcCccUcCAACCGCc..cCgcaCcguGcUgccCcaUgCacugcGggGUGAUAUaUgUGg.CGGAGAU
//
