INFERNAL1/a [1.1.4 | Dec 2020] NAME TB10Cs3H2 ACC RF01532 DESC Trypanosomatid snoRNA TB10Cs3H2 STATES 211 NODES 55 CLEN 69 W 89 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:26:40 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 1.995117 CKSUM 1802909049 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 50.20 NC 34.20 EFP7GF -8.9033 0.71908 ECMLC 0.59411 -6.92911 2.65406 1600000 356316 0.003368 ECMGC 0.41067 -16.21633 -2.96920 1600000 92201 0.004338 ECMLI 0.55699 -5.25538 3.93594 1600000 200688 0.005979 ECMGI 0.43890 -11.29669 0.33695 1600000 66006 0.006060 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 89 111 -6.975 -7.182 -0.052 -5.596 IL 1 1 2 1 4 1 26 92 114 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 91 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 25 89 111 -7.989 -0.020 -6.643 -0.781 -0.005 -1.537 1.054 D 4 2 3 5 3 0 20 87 109 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 25 90 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 24 88 110 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 7 5 3 8 3 0 19 86 108 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 24 89 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 24 87 109 -7.989 -0.020 -6.643 -0.789 0.804 -1.589 0.425 D 10 8 3 11 3 0 18 85 107 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 23 88 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 23 86 108 -7.989 -0.020 -6.643 -0.085 0.039 -1.143 0.657 D 13 11 3 14 3 0 18 84 106 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 22 87 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 1 22 85 107 -7.989 -0.020 -6.643 0.282 -0.450 -0.009 0.081 D 16 14 3 17 3 0 17 83 105 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 21 86 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - g - - - ML 18 17 3 20 3 1 21 84 106 -7.989 -0.020 -6.643 -0.359 0.270 0.285 -0.330 D 19 17 3 20 3 0 16 82 104 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 20 85 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 20 83 104 -7.989 -0.020 -6.643 -1.802 1.640 -2.627 -1.203 D 22 20 3 23 3 0 15 81 103 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 20 84 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 24 23 3 26 3 1 19 81 103 -8.378 -0.018 -6.696 0.853 -0.947 -1.076 0.264 D 25 23 3 26 3 0 14 80 102 -5.620 -0.734 -1.403 IL 26 26 3 26 3 1 18 82 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 73 - u - - MR 27 26 3 29 3 1 19 80 102 -8.378 -0.018 -6.696 -0.431 -0.350 -0.664 0.882 D 28 26 3 29 3 0 12 79 101 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 17 81 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 72 - A - - MR 30 29 3 32 3 1 18 79 101 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 31 29 3 32 3 0 11 78 100 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 17 80 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 71 - G - - MR 33 32 3 35 3 1 17 78 100 -8.378 -0.018 -6.696 -1.634 -2.862 1.735 -2.249 D 34 32 3 35 3 0 10 77 99 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 16 79 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 70 - A - - MR 36 35 3 38 3 1 17 77 99 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 37 35 3 38 3 0 9 76 98 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 15 78 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 69 - G - - MR 39 38 3 41 5 1 16 76 98 -7.115 -0.038 -6.931 -7.143 -8.034 -1.634 -2.862 1.735 -2.249 D 40 38 3 41 5 0 8 75 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 13 77 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 68 G C - - MP 42 41 3 46 6 2 17 75 97 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.794 -3.119 -4.898 0.165 -5.307 -4.714 -0.658 -5.145 -4.362 3.651 -4.695 -0.820 -1.042 -4.502 -2.698 -3.774 ML 43 41 3 46 6 1 10 74 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 10 74 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 6 71 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 12 75 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 12 75 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 67 C G - - MP 48 47 6 52 6 2 15 73 95 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 49 47 6 52 6 1 10 72 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 9 72 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 5 69 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 11 73 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 12 73 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 66 c g - - MP 54 53 6 58 6 2 14 71 93 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.299 -3.033 -3.305 1.633 -2.625 -4.047 2.620 -3.171 -3.306 1.014 -3.769 -0.916 1.176 -3.510 -0.309 -2.214 ML 55 53 6 58 6 1 9 70 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 8 70 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 5 67 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 11 71 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 11 71 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 65 g c - - MP 60 59 6 64 6 2 12 69 91 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -2.650 -0.629 -2.747 1.379 -2.734 -3.517 1.720 -3.019 -2.839 2.216 -3.321 -0.253 0.973 -2.821 -0.566 -1.818 ML 61 59 6 64 6 1 8 68 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 7 68 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 5 66 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 9 69 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 9 69 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 64 C G - - MP 66 65 6 70 4 2 10 67 89 -2.289 -7.182 -0.381 -5.596 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 67 65 6 70 4 1 7 66 88 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 6 66 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 5 65 87 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 9 67 89 -2.594 -3.277 -0.488 -5.763 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 8 67 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - u - - - ML 72 71 6 74 3 1 8 65 87 -8.378 -0.018 -6.696 -0.110 -0.020 -1.154 0.712 D 73 71 6 74 3 0 4 63 85 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 7 65 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 63 - U - - MR 75 74 3 77 5 1 8 64 86 -7.115 -0.038 -6.931 -7.143 -8.034 -1.532 -1.520 -2.268 1.631 D 76 74 3 77 5 0 2 62 84 -5.352 -0.707 -2.978 -4.409 -2.404 IR 77 77 3 77 5 1 6 64 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 62 C G - - MP 78 77 3 82 6 2 8 63 85 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 79 77 3 82 6 1 4 62 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 3 61 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 59 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 5 62 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 5 62 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 61 C G - - MP 84 83 6 88 4 2 6 61 83 -6.975 -7.182 -0.052 -5.596 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 85 83 6 88 4 1 3 61 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 60 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 59 81 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 5 62 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 4 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 18 - G - - - ML 90 89 6 92 3 1 5 58 80 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 91 89 6 92 3 0 0 57 79 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 4 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 19 - G - - - ML 93 92 3 95 3 1 4 57 79 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 94 92 3 95 3 0 0 56 78 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 3 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 20 - G - - - ML 96 95 3 98 3 1 4 56 78 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 97 95 3 98 3 0 0 55 77 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 3 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 21 - C - - - ML 99 98 3 101 3 1 3 55 77 -7.989 -0.020 -6.643 -1.802 1.640 -2.627 -1.203 D 100 98 3 101 3 0 0 54 76 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 2 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 22 - A - - - ML 102 101 3 104 3 1 3 54 76 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 103 101 3 104 3 0 0 53 75 -5.620 -0.734 -1.403 IL 104 104 3 104 3 1 1 55 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 60 - C - - MR 105 104 3 107 3 1 2 53 75 -8.378 -0.018 -6.696 -1.802 1.640 -2.627 -1.203 D 106 104 3 107 3 0 0 52 73 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 54 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 59 - U - - MR 108 107 3 110 3 1 2 52 74 -8.378 -0.018 -6.696 -1.532 -1.520 -2.268 1.631 D 109 107 3 110 3 0 0 51 72 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 53 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 58 - A - - MR 111 110 3 113 3 1 2 51 73 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 112 110 3 113 3 0 0 50 72 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 52 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 57 - A - - MR 114 113 3 116 5 1 1 50 72 -7.115 -0.038 -6.931 -7.143 -8.034 1.730 -2.422 -2.049 -1.969 D 115 113 3 116 5 0 0 49 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 51 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 56 G C - - MP 117 116 3 121 6 2 2 49 71 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.940 -2.667 -3.971 0.821 -4.615 -4.518 -0.072 -4.319 -3.870 3.245 -4.273 1.026 -0.358 -3.940 -2.049 -2.867 ML 118 116 3 121 6 1 1 48 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 48 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 45 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 49 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 49 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 55 G C - - MP 123 122 6 127 6 2 2 47 69 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.794 -3.119 -4.898 0.165 -5.307 -4.714 -0.658 -5.145 -4.362 3.651 -4.695 -0.820 -1.042 -4.502 -2.698 -3.774 ML 124 122 6 127 6 1 1 46 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 46 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 43 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 47 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 47 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 54 A U - - MP 129 128 6 133 6 2 2 45 67 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.839 -2.858 -3.854 3.362 -4.216 -5.283 0.087 -3.893 -3.744 1.027 -4.294 -0.326 -0.331 -4.463 -1.854 -2.685 ML 130 128 6 133 6 1 1 44 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 44 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 41 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 45 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 45 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 53 u g - - MP 135 134 6 139 6 2 2 43 65 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.952 -3.964 -3.708 -0.302 -2.506 -4.153 2.217 -3.279 -3.755 -0.093 -4.070 -2.065 0.983 -4.036 2.698 -2.631 ML 136 134 6 139 6 1 1 42 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 42 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 43 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 43 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 27 52 g c - - MP 141 140 6 145 4 2 2 41 63 -6.975 -7.182 -0.052 -5.596 -2.881 -2.208 -3.001 1.100 -3.237 -3.725 0.716 -3.319 -0.473 2.655 -3.467 1.092 0.461 -3.068 -1.068 -2.043 ML 142 140 6 145 4 1 1 41 63 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 41 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 40 62 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 43 64 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 42 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 28 - a - - - ML 147 146 6 149 3 1 1 39 61 -8.378 -0.018 -6.696 0.399 -0.576 0.311 -0.377 D 148 146 6 149 3 0 0 38 60 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 40 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 51 - g - - MR 150 149 3 152 3 1 1 38 60 -8.378 -0.018 -6.696 0.242 -1.582 0.985 -0.989 D 151 149 3 152 3 0 0 36 58 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 39 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 50 - u - - MR 153 152 3 155 3 1 1 37 59 -8.378 -0.018 -6.696 -0.269 -0.431 0.191 0.364 D 154 152 3 155 3 0 0 35 57 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 38 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 49 - u - - MR 156 155 3 158 5 1 1 36 58 -2.581 -0.297 -6.931 -7.143 -8.034 -0.752 0.130 -1.514 0.972 D 157 155 3 158 5 0 0 34 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 158 158 3 158 5 1 1 36 58 -2.950 -0.322 -6.461 -4.629 -5.734 0.000 0.000 0.000 0.000 [ MATP 41 ] 29 47 C G - - MP 159 158 3 163 6 2 2 35 57 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 160 158 3 163 6 1 1 33 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 3 163 6 1 1 33 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 3 163 6 0 0 31 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 34 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 34 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 30 46 G C - - MP 165 164 6 169 6 2 2 33 55 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.794 -3.119 -4.898 0.165 -5.307 -4.714 -0.658 -5.145 -4.362 3.651 -4.695 -0.820 -1.042 -4.502 -2.698 -3.774 ML 166 164 6 169 6 1 1 31 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 31 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 29 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 32 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 32 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 31 45 C G - - MP 171 170 6 175 6 2 2 31 53 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 172 170 6 175 6 1 1 30 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 30 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 28 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 31 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 30 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 32 44 C G - - MP 177 176 6 181 4 2 2 29 51 -6.975 -7.182 -0.052 -5.596 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 178 176 6 181 4 1 1 29 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 4 1 1 28 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 180 176 6 181 4 0 0 27 49 -4.568 -4.250 -2.265 -0.520 IL 181 181 5 181 4 1 1 30 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 182 182 6 182 3 1 1 29 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 33 - C - - - ML 183 182 6 185 3 1 1 27 48 -2.421 -0.481 -3.366 -0.695 1.048 -0.803 -0.432 D 184 182 6 185 3 0 0 23 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 49 -1.220 -0.888 -5.040 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - G - - - ML 186 185 3 188 3 1 1 21 40 -7.858 -0.022 -6.512 -1.353 -2.536 1.665 -1.921 D 187 185 3 188 3 0 0 20 39 -7.037 -2.550 -0.283 IL 188 188 3 188 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - u - - - ML 189 188 3 191 3 1 1 20 39 -7.858 -0.176 -3.174 -0.625 0.264 -1.385 0.822 D 190 188 3 191 3 0 0 19 38 -7.037 -0.688 -1.429 IL 191 191 3 191 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - G - - - ML 192 191 3 194 3 1 1 19 37 -7.851 -0.022 -6.505 -1.339 -2.519 1.661 -1.904 D 193 191 3 194 3 0 0 18 37 -7.068 -0.669 -1.459 IL 194 194 3 194 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - u - - - ML 195 194 3 197 3 1 1 18 36 -7.989 -0.020 -6.643 -0.296 -0.360 -0.146 0.587 D 196 194 3 197 3 0 0 17 36 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - c - - - ML 198 197 3 200 3 1 1 16 35 -7.989 -0.020 -6.643 -0.789 0.804 -1.589 0.425 D 199 197 3 200 3 0 0 16 34 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - c - - - ML 201 200 3 203 3 1 1 15 33 -7.989 -0.020 -6.643 -0.433 0.615 -0.118 -0.311 D 202 200 3 203 3 0 0 15 33 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - u - - - ML 204 203 3 206 3 1 1 13 31 -7.989 -0.020 -6.643 -0.044 -0.802 -0.524 0.816 D 205 203 3 206 3 0 0 13 32 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 43 - U - - - ML 207 206 3 209 2 1 1 1 1 * 0.000 -1.532 -1.520 -2.268 1.631 D 208 206 3 209 2 0 0 0 0 * 0.000 IL 209 209 3 209 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 54 ] - - - - - - E 210 209 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB10Cs3H2 ACC RF01532 DESC Trypanosomatid snoRNA TB10Cs3H2 LENG 69 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:26:40 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 6 EFFN 2.721680 CKSUM 1802909049 STATS LOCAL MSV -8.9493 0.71908 STATS LOCAL VITERBI -9.0034 0.71908 STATS LOCAL FORWARD -3.0415 0.71908 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.69594 1.27346 1.10162 1.58779 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 0.00000 * 1 2.08643 1.37389 2.62209 0.59766 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 2 2.87870 3.77977 0.12101 3.35415 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 3 2.09602 0.74638 2.67260 1.09691 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 4 1.47531 1.32563 2.26789 0.91099 4 u - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 5 1.19338 1.70652 1.36275 1.34956 5 a - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 6 1.74861 1.13652 1.11765 1.72596 6 g - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 7 3.05910 0.16317 3.63435 2.56107 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 8 0.74791 2.13593 2.23137 1.20021 8 a - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 9 2.69821 3.41596 0.14518 3.35358 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 10 3.37825 0.20019 3.17375 2.24933 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 11 1.47951 0.83151 1.93581 1.64739 11 c - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 12 1.47022 1.46079 1.02871 1.71146 12 g - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 13 3.37614 0.20038 3.17270 2.24895 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.28479 1.47171 4.00124 0.15241 1.95640 1.09861 0.40547 14 1.49564 1.37356 2.27687 0.86729 15 u - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 15 3.37502 0.20048 3.17214 2.24875 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 16 3.37770 0.20024 3.17348 2.24923 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 17 2.87870 3.77977 0.12101 3.35415 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 18 2.87870 3.77977 0.12101 3.35415 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 19 2.87870 3.77977 0.12101 3.35415 20 G - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 20 3.05910 0.16317 3.63435 2.56107 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 21 0.12823 3.41493 3.12210 3.13708 22 A - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 22 2.16543 2.91149 0.26355 2.77123 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 23 2.69935 3.41740 0.14495 3.35556 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 24 0.27617 2.99139 1.98901 2.91386 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 25 3.02956 1.21931 2.83481 0.51500 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 26 1.88922 2.32067 0.45190 2.16992 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 27 1.10918 1.80023 1.11340 1.73459 28 a - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 28 3.35717 0.20212 3.16315 2.24549 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 29 2.69383 3.41038 0.14604 3.34592 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 30 3.37009 0.20093 3.16966 2.24785 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 31 3.37150 0.20080 3.17037 2.24811 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 32 2.06963 0.54025 2.01395 1.84705 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.42830 1.47171 2.12987 0.74917 0.64009 1.09861 0.40547 33 2.66136 3.53382 0.15511 3.10934 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04153 3.89526 3.89526 1.46634 0.26236 2.13974 0.12521 34 1.94762 1.15683 2.48808 0.77689 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.17174 3.89526 1.98441 1.46634 0.26236 0.26836 1.44659 35 2.65021 3.52109 0.15713 3.09661 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04175 3.88992 3.88992 1.46634 0.26236 0.25921 1.47691 36 1.65819 1.64417 1.45826 0.95789 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 37 2.09602 0.74638 2.67260 1.09691 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 38 1.81713 0.86529 1.44140 1.71489 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 39 1.44352 2.02423 1.76099 0.77667 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 40 2.77597 2.71199 3.29954 0.18104 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 41 2.52405 3.33438 0.17369 3.13104 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 42 2.52222 3.33174 0.17414 3.12796 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 43 3.51649 0.17511 3.24021 2.38843 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 44 2.51153 3.31634 0.17677 3.10999 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.28479 1.47171 4.00124 0.15241 1.95640 1.09861 0.40547 45 2.06027 1.26446 2.60164 0.66157 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 46 1.64184 1.69793 1.19891 1.13385 50 u - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 47 1.23138 2.66462 0.62616 2.26489 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 48 1.96485 0.81316 2.12766 1.21318 52 c - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 49 2.12863 2.99078 0.26239 2.78808 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 50 3.14215 2.30424 2.80277 0.22774 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 51 3.56198 0.17163 3.26114 2.39707 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 52 3.01225 0.44993 2.73117 1.39431 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 53 0.12823 3.41493 3.12210 3.13708 57 A - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 54 0.12823 3.41493 3.12210 3.13708 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 55 2.77597 2.71199 3.29954 0.18104 59 U - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 56 3.05910 0.16317 3.63435 2.56107 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 57 2.53206 3.34598 0.17174 3.14460 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 58 2.53441 3.34939 0.17118 3.14859 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 59 2.77597 2.71199 3.29954 0.18104 63 U - - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 60 2.52827 3.34048 0.17266 3.13817 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 61 1.94392 1.03867 1.32776 1.43607 65 c - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 62 1.89194 2.11519 0.74966 1.36226 66 g - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 63 2.53216 3.34612 0.17172 3.14477 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 64 3.56990 0.17104 3.26474 2.39854 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 65 2.87870 3.77977 0.12101 3.35415 69 G - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 66 0.12823 3.41493 3.12210 3.13708 70 A - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 67 2.87870 3.77977 0.12101 3.35415 71 G - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 68 0.12823 3.41493 3.12210 3.13708 72 A - - : 1.38629 1.38629 1.38629 1.38629 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547 69 1.77431 1.64575 1.86743 0.72772 73 u - - : 1.38629 1.38629 1.38629 1.38629 0.01881 3.98278 * 1.46634 0.26236 0.00000 * //