INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs3H1 ACC RF01531 DESC Trypanosomatid snoRNA TB10Cs3H1 STATES 190 NODES 46 CLEN 62 W 100 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 20:31:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01531/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.996094 CKSUM 4203870341 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 42.60 NC 39.20 EFP7GF -9.0623 0.71924 ECMLC 0.58857 -7.16186 2.76876 1600000 414529 0.002895 ECMGC 0.45029 -15.83130 -3.01124 1600000 128563 0.003111 ECMLI 0.59296 -5.60277 3.92582 1600000 341183 0.003517 ECMGI 0.47504 -11.38643 0.00422 1600000 89542 0.004467 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 100 146 -6.975 -7.182 -0.052 -5.596 IL 1 1 2 1 4 1 18 102 149 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 101 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 100 146 -8.378 -0.018 -6.696 1.730 -2.423 -2.049 -1.970 D 4 2 3 5 3 0 12 98 145 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 16 100 147 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - g - - MR 6 5 3 8 3 1 16 99 145 -8.378 -0.018 -6.696 -0.354 0.147 0.410 -0.356 D 7 5 3 8 3 0 10 97 143 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 99 146 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - A - - MR 9 8 3 11 3 1 15 98 144 -8.378 -0.018 -6.696 1.730 -2.423 -2.049 -1.970 D 10 8 3 11 3 0 9 96 142 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 98 145 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - G - - MR 12 11 3 14 3 1 14 97 143 -8.378 -0.018 -6.696 -1.634 -2.863 1.736 -2.250 D 13 11 3 14 3 0 8 95 141 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 97 144 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - A - - MR 15 14 3 17 3 1 13 96 142 -8.378 -0.018 -6.696 1.730 -2.423 -2.049 -1.970 D 16 14 3 17 3 0 7 94 140 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 12 96 143 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 63 - G - - MR 18 17 3 20 5 1 13 95 141 -7.115 -0.038 -6.931 -7.143 -8.035 -1.634 -2.863 1.736 -2.250 D 19 17 3 20 5 0 6 93 140 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 10 95 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 2 62 G C - - MP 21 20 3 25 6 2 12 94 140 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.795 -3.119 -4.899 0.165 -5.308 -4.715 -0.659 -5.146 -4.363 3.651 -4.696 -0.820 -1.043 -4.503 -2.699 -3.775 ML 22 20 3 25 6 1 7 92 139 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 7 92 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 3 89 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 9 93 140 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 9 93 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 61 C G - - MP 27 26 6 31 6 2 11 92 138 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.609 -4.521 -4.289 -0.747 -2.994 -4.693 3.569 -3.810 -4.340 -0.515 -4.595 -2.468 0.514 -4.675 -0.702 -3.178 ML 28 26 6 31 6 1 6 90 137 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 7 90 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 3 88 134 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 8 91 138 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 8 91 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 4 60 a u - - MP 33 32 6 37 4 2 9 90 136 -6.889 -8.135 -0.079 -4.588 -3.437 -2.483 -3.495 2.599 -3.898 -4.539 0.443 -3.710 -3.449 2.379 -3.952 -0.062 0.132 -3.755 -1.497 -2.371 ML 34 32 6 37 4 1 4 89 135 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 6 89 135 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 2 87 133 -12.737 -14.007 -2.036 -0.404 IL 37 37 5 37 4 1 6 89 136 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 7 89 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 59 - G - - MR 39 38 6 41 5 1 8 88 134 -7.115 -0.038 -6.931 -7.143 -8.035 -1.634 -2.863 1.736 -2.250 D 40 38 6 41 5 0 2 86 133 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 6 88 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 58 G C - - MP 42 41 3 46 6 2 8 87 133 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.795 -3.119 -4.899 0.165 -5.308 -4.715 -0.659 -5.146 -4.363 3.651 -4.696 -0.820 -1.043 -4.503 -2.699 -3.775 ML 43 41 3 46 6 1 4 85 132 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 3 85 131 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 0 82 128 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 5 86 133 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 5 86 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 57 U A - - MP 48 47 6 52 6 2 7 85 131 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.253 -4.080 -4.084 -0.370 -3.013 -4.643 1.317 -3.713 -4.089 -0.126 -4.459 -1.977 3.357 -4.402 -0.688 -2.907 ML 49 47 6 52 6 1 3 83 130 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 2 83 130 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 81 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 4 84 131 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 4 84 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 7 56 G C - - MP 54 53 6 58 4 2 5 83 129 -6.975 -7.182 -0.052 -5.596 -4.795 -3.119 -4.899 0.165 -5.308 -4.715 -0.659 -5.146 -4.363 3.651 -4.696 -0.820 -1.043 -4.503 -2.699 -3.775 ML 55 53 6 58 4 1 2 82 129 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 1 81 128 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 0 80 127 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 4 83 130 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 3 83 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 8 - U - - - ML 60 59 6 62 3 1 4 81 127 -7.989 -0.020 -6.644 -1.533 -1.521 -2.269 1.631 D 61 59 6 62 3 0 0 79 125 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 3 82 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 9 - C - - - ML 63 62 3 65 3 1 4 80 126 -7.989 -0.020 -6.644 -1.803 1.640 -2.628 -1.204 D 64 62 3 65 3 0 0 78 124 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 2 81 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 10 - G - - - ML 66 65 3 68 3 1 3 79 125 -7.989 -0.020 -6.644 -1.634 -2.863 1.736 -2.250 D 67 65 3 68 3 0 0 77 124 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 2 80 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 11 - C - - - ML 69 68 3 71 3 1 2 78 124 -8.378 -0.018 -6.696 -1.803 1.640 -2.628 -1.204 D 70 68 3 71 3 0 0 76 123 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 1 78 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 55 - a - - MR 72 71 3 74 3 1 2 77 123 -8.378 -0.018 -6.696 0.663 -1.428 0.571 -0.839 D 73 71 3 74 3 0 0 75 121 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 77 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 54 - A - - MR 75 74 3 77 3 1 2 76 122 -8.378 -0.018 -6.696 1.730 -2.423 -2.049 -1.970 D 76 74 3 77 3 0 0 74 120 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 76 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 53 - A - - MR 78 77 3 80 3 1 1 75 121 -8.378 -0.018 -6.696 1.730 -2.423 -2.049 -1.970 D 79 77 3 80 3 0 0 73 119 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 75 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 52 - G - - MR 81 80 3 83 3 1 1 74 120 -8.378 -0.018 -6.696 -1.634 -2.863 1.736 -2.250 D 82 80 3 83 3 0 0 72 119 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 74 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 51 - C - - MR 84 83 3 86 5 1 1 73 119 -7.115 -0.038 -6.931 -7.143 -8.035 -1.803 1.640 -2.628 -1.204 D 85 83 3 86 5 0 0 71 118 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 73 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 12 50 U A - - MP 87 86 3 91 6 2 2 72 118 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.253 -4.080 -4.084 -0.370 -3.013 -4.643 1.317 -3.713 -4.089 -0.126 -4.459 -1.977 3.357 -4.402 -0.688 -2.907 ML 88 86 3 91 6 1 1 70 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 70 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 67 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 71 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 71 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 13 49 A U - - MP 93 92 6 97 6 2 2 70 117 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -3.840 -2.859 -3.855 3.362 -4.217 -5.284 0.086 -3.894 -3.744 1.026 -4.295 -0.327 -0.331 -4.464 -1.855 -2.686 ML 94 92 6 97 6 1 1 68 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 68 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 66 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 69 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 69 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 14 48 U G - - MP 99 98 6 103 4 2 2 68 115 -6.975 -7.182 -0.052 -5.596 -4.145 -4.068 -3.835 -0.397 -2.575 -4.251 1.713 -3.354 -3.876 -0.213 -4.162 -2.067 0.856 -4.225 3.039 -2.744 ML 100 98 6 103 4 1 1 67 114 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 1 66 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 0 65 112 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 68 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 68 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 15 - G - - - ML 105 104 6 107 5 1 1 66 112 -7.115 -0.038 -6.931 -7.143 -8.035 -1.634 -2.863 1.736 -2.250 D 106 104 6 107 5 0 0 64 111 -4.959 -0.803 -4.221 -2.596 -2.508 IL 107 107 3 107 5 1 1 66 113 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 47 C G - - MP 108 107 3 112 6 2 2 65 112 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.609 -4.521 -4.289 -0.747 -2.994 -4.693 3.569 -3.810 -4.340 -0.515 -4.595 -2.468 0.514 -4.675 -0.702 -3.178 ML 109 107 3 112 6 1 1 63 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 1 63 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 0 60 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 64 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 64 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 46 G C - - MP 114 113 6 118 6 2 2 63 110 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.795 -3.119 -4.899 0.165 -5.308 -4.715 -0.659 -5.146 -4.363 3.651 -4.696 -0.820 -1.043 -4.503 -2.699 -3.775 ML 115 113 6 118 6 1 1 61 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 61 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 58 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 62 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 62 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 45 U A - - MP 120 119 6 124 6 2 2 61 108 -9.118 -9.057 -0.179 -7.834 -3.242 -8.508 -4.253 -4.080 -4.084 -0.370 -3.013 -4.643 1.317 -3.713 -4.089 -0.126 -4.459 -1.977 3.357 -4.402 -0.688 -2.907 ML 121 119 6 124 6 1 1 59 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 60 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 57 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 60 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 60 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 44 c g - - MP 126 125 6 130 4 2 2 59 106 -6.487 -7.732 -0.106 -4.186 -3.320 -3.190 -3.225 0.472 -2.283 -3.819 2.543 -2.956 -3.253 0.845 -3.651 -1.178 2.106 -3.462 0.025 -2.141 ML 127 125 6 130 4 1 1 58 104 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 59 105 -0.430 -14.398 -2.260 -4.355 1.452 -1.534 -1.248 -1.006 D 129 125 6 130 4 0 0 56 102 -12.737 -14.007 -2.036 -0.404 IL 130 130 5 130 4 1 1 58 105 -3.718 -5.221 -0.296 -3.600 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 58 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 43 - c - - MR 132 131 6 134 3 1 1 57 104 -8.378 -0.018 -6.696 -0.873 0.981 -1.683 0.224 D 133 131 6 134 3 0 0 55 102 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 57 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 42 - g - - MR 135 134 3 137 5 1 1 56 103 -7.115 -0.038 -6.931 -7.143 -8.035 -0.456 -0.501 0.934 -0.615 D 136 134 3 137 5 0 0 54 101 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 56 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 21 41 c g - - MP 138 137 3 142 6 2 2 55 102 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -2.815 -2.852 -2.885 0.571 -2.298 -3.626 2.190 0.262 -2.911 0.723 -3.405 -1.076 2.136 -3.068 -0.117 -1.922 ML 139 137 3 142 6 1 1 53 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 53 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 49 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 54 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 54 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 22 40 C G - - MP 144 143 6 148 6 2 2 53 100 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.609 -4.521 -4.289 -0.747 -2.994 -4.693 3.569 -3.810 -4.340 -0.515 -4.595 -2.468 0.514 -4.675 -0.702 -3.178 ML 145 143 6 148 6 1 1 51 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 51 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 47 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 52 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 52 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 23 39 C G - - MP 150 149 6 154 6 2 2 51 98 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -4.609 -4.521 -4.289 -0.747 -2.994 -4.693 3.569 -3.810 -4.340 -0.515 -4.595 -2.468 0.514 -4.675 -0.702 -3.178 ML 151 149 6 154 6 1 1 49 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 49 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 45 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 50 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 50 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 24 38 G C - - MP 156 155 6 160 6 2 2 49 96 -9.118 -9.057 -0.021 -7.834 -8.113 -8.508 -3.834 0.010 -3.872 0.760 -4.401 -4.317 -0.020 -4.268 -3.812 3.299 -4.199 -0.383 -0.296 -3.770 -1.942 -2.842 ML 157 155 6 160 6 1 1 47 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 46 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 43 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 48 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 48 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 25 37 c g - - MP 162 161 6 166 4 2 2 47 94 -1.876 -7.182 -0.515 -5.596 -3.459 -3.423 -3.404 0.264 -2.462 -4.037 2.627 -3.135 -3.411 0.479 -3.839 -1.450 1.888 -3.636 1.056 -2.312 ML 163 161 6 166 4 1 1 43 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 41 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 40 87 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 48 95 -0.571 -4.885 -1.801 -7.370 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - c - - - ML 168 167 6 170 3 1 1 20 39 -7.989 -0.020 -6.644 0.046 0.839 -1.350 -0.346 D 169 167 6 170 3 0 0 19 38 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - a - - - ML 171 170 3 173 3 1 1 19 37 -7.989 -0.020 -6.644 0.241 0.125 -0.217 -0.205 D 172 170 3 173 3 0 0 18 37 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - a - - - ML 174 173 3 176 3 1 1 18 36 -7.989 -0.020 -6.644 0.213 -0.261 -0.236 0.210 D 175 173 3 176 3 0 0 17 36 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 33 - c - - - ML 177 176 3 179 3 1 1 16 35 -7.989 -0.020 -6.644 -0.873 0.981 -1.683 0.224 D 178 176 3 179 3 0 0 16 34 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - a - - - ML 180 179 3 182 3 1 1 15 33 -7.989 -0.020 -6.644 0.760 -1.411 0.450 -0.826 D 181 179 3 182 3 0 0 15 33 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 35 - a - - - ML 183 182 3 185 3 1 1 13 31 -7.989 -0.020 -6.644 0.718 -1.417 0.504 -0.830 D 184 182 3 185 3 0 0 13 32 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 36 - U - - - ML 186 185 3 188 2 1 1 1 1 * 0.000 -1.533 -1.521 -2.269 1.631 D 187 185 3 188 2 0 0 0 0 * 0.000 IL 188 188 3 188 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 189 188 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs3H1 ACC RF01531 DESC Trypanosomatid snoRNA TB10Cs3H1 LENG 62 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 20:31:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01531/CM NSEQ 4 EFFN 2.878906 CKSUM 4203870341 STATS LOCAL MSV -8.3950 0.71924 STATS LOCAL VITERBI -8.7491 0.71924 STATS LOCAL FORWARD -3.5733 0.71924 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.48839 1.33933 1.14690 1.63669 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 * 1 0.11927 3.48275 3.18361 3.21200 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 2 2.74332 3.48395 0.13662 3.42173 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 3 3.45057 0.18634 3.25363 2.30615 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 4 0.77384 2.62040 0.96057 2.48515 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 5 2.72976 3.46629 0.13917 3.39763 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 6 3.24366 2.11991 3.03062 0.23237 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 7 2.73889 3.47817 0.13745 3.41383 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 8 2.84078 2.76607 3.36647 0.16937 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 9 3.14081 0.15066 3.71439 2.62775 9 C - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 10 2.94626 3.85546 0.11219 3.42885 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 11 3.14081 0.15066 3.71439 2.62775 11 C - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 12 3.25628 2.12094 3.03674 0.23123 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 13 0.25419 3.07851 2.05187 2.99699 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 14 3.15694 1.69953 2.97687 0.32335 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 15 2.94626 3.85546 0.11219 3.42885 15 G - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 16 3.45523 0.18595 3.25600 2.30700 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 17 2.74478 3.48585 0.13635 3.42433 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 18 3.25767 2.12105 3.03741 0.23110 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 19 2.33128 0.90869 2.03863 0.99541 19 c - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 20 2.29300 0.90693 2.11160 0.98288 21 c - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 21 3.43000 0.18808 3.24310 2.30235 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 22 3.43728 0.18746 3.24684 2.30370 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 23 1.75043 2.96128 0.33517 2.82456 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 24 2.51503 0.86134 2.28885 0.92846 25 c - - < 1.38629 1.38629 1.38629 1.38629 0.38582 1.19731 4.01173 1.38936 0.28666 1.09861 0.40547 25 1.39555 0.69040 2.52407 1.76730 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 26 1.22757 1.24698 1.51579 1.60948 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 27 1.24342 1.55801 1.53383 1.25406 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 28 2.21064 0.60187 2.80030 1.26658 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 29 0.81142 2.56271 1.01023 2.16679 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 30 0.84473 2.56715 0.96917 2.17002 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 31 2.84078 2.76607 3.36647 0.16937 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 32 1.35612 2.45840 0.58844 2.28693 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 33 3.05331 0.28337 2.77976 1.98411 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 34 2.58483 3.41870 0.16080 3.20958 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 35 2.58600 3.42043 0.16053 3.21159 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 36 1.11014 2.28434 1.03987 1.53644 41 g - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 37 1.88114 1.75472 0.61300 2.01813 42 G - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 38 2.21064 0.60187 2.80030 1.26658 43 C - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 39 0.96776 2.26728 0.91845 2.14273 44 g - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 40 0.26256 3.22315 1.95718 2.99909 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 41 3.60075 0.16374 3.31865 2.43571 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 42 2.57936 3.41062 0.16204 3.20024 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 43 2.26912 3.16002 0.22445 2.89649 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 44 3.22830 2.37572 2.89089 0.20838 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 45 0.26097 3.23363 1.95869 3.01108 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 46 3.14081 0.15066 3.71439 2.62775 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 47 2.94626 3.85546 0.11219 3.42885 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 48 0.11927 3.48275 3.18361 3.21200 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 49 0.11927 3.48275 3.18361 3.21200 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 50 0.88813 2.57510 0.91872 2.17685 55 a - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 51 3.61090 0.16302 3.32338 2.43763 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 52 0.26200 3.22678 1.95771 3.00325 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 53 3.62137 0.16228 3.32823 2.43959 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 54 2.94626 3.85546 0.11219 3.42885 59 G - - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 55 2.71624 1.09093 2.42925 0.67360 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 56 2.58979 3.42603 0.15968 3.21807 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 57 3.63525 0.16132 3.33461 2.44215 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 58 2.94626 3.85546 0.11219 3.42885 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 59 0.11927 3.48275 3.18361 3.21200 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 60 2.94626 3.85546 0.11219 3.42885 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 61 0.11927 3.48275 3.18361 3.21200 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 62 1.76986 1.22460 1.00476 1.77410 67 g - - : 1.38629 1.38629 1.38629 1.38629 0.01861 3.99346 * 1.46634 0.26236 0.00000 * //