INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs2H1 ACC RF01525 DESC Trypanosomatid snoRNA TB10Cs2H1 STATES 202 NODES 58 CLEN 66 W 94 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 23:02:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01525/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.972656 CKSUM 2860072125 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 36.80 NC 33.80 EFP7GF -10.4206 0.71935 ECMLC 0.59789 -7.11179 2.24168 1600000 322044 0.003726 ECMGC 0.43762 -17.32764 -4.91762 1600000 91337 0.004379 ECMLI 0.59113 -5.84219 3.21488 1600000 253715 0.004730 ECMGI 0.45659 -13.54237 -2.15308 1600000 72530 0.005515 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 94 128 -7.322 -7.529 -0.041 -5.943 IL 1 1 2 1 4 1 25 96 131 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 96 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 25 94 128 -8.685 -0.015 -7.003 0.033 0.983 -1.641 -0.557 D 4 2 3 5 3 0 20 93 127 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 24 94 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 69 - c - - MR 6 5 3 8 3 1 24 93 127 -8.685 -0.015 -7.003 0.033 0.983 -1.641 -0.557 D 7 5 3 8 3 0 18 91 125 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 23 93 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 68 - u - - MR 9 8 3 11 3 1 23 92 126 -8.685 -0.015 -7.003 -1.016 0.664 -1.835 0.714 D 10 8 3 11 3 0 17 90 124 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 22 92 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 67 - a - - MR 12 11 3 14 3 1 22 91 125 -8.685 -0.015 -7.003 0.681 -1.039 -1.235 0.571 D 13 11 3 14 3 0 16 89 123 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 21 91 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 66 - A - - MR 15 14 3 17 3 1 21 90 124 -8.685 -0.015 -7.003 1.835 -3.081 -2.644 -2.696 D 16 14 3 17 3 0 16 88 122 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 20 91 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 65 - G - - MR 18 17 3 20 3 1 20 89 123 -8.685 -0.015 -7.003 -2.306 -3.625 1.845 -3.008 D 19 17 3 20 3 0 15 87 121 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 19 90 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 64 - A - - MR 21 20 3 23 3 1 19 88 122 -8.685 -0.015 -7.003 1.835 -3.081 -2.644 -2.696 D 22 20 3 23 3 0 14 86 120 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 19 89 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 63 - c - - MR 24 23 3 26 5 1 19 87 121 -7.404 -0.031 -7.219 -7.431 -8.323 -0.453 0.329 -0.286 0.255 D 25 23 3 26 5 0 13 86 120 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 17 87 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 2 62 G C - - MP 27 26 3 31 6 2 18 86 120 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 28 26 3 31 6 1 14 85 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 6 1 12 84 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 3 31 6 0 10 82 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 15 86 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 15 85 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 3 61 G C - - MP 33 32 6 37 4 2 16 84 118 -7.322 -7.529 -0.041 -5.943 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 34 32 6 37 4 1 13 83 118 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 11 83 117 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 9 82 116 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 15 84 119 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 14 84 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 4 - C - - - ML 39 38 6 41 3 1 15 82 116 -8.685 -0.015 -7.003 -1.271 1.202 -2.129 0.080 D 40 38 6 41 3 0 8 81 115 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 13 82 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 60 - C - - MR 42 41 3 44 5 1 14 81 115 -7.404 -0.031 -7.219 -7.431 -8.323 -1.235 1.161 -2.090 0.143 D 43 41 3 44 5 0 6 79 114 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 11 81 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 5 59 G C - - MP 45 44 3 49 6 2 15 80 114 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 46 44 3 49 6 1 8 78 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 8 78 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 3 75 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 10 79 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 10 79 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 6 58 u a - - MP 51 50 6 55 6 2 14 78 112 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -3.930 -3.926 -3.804 -0.232 -2.744 -4.366 1.574 -3.462 -3.822 -0.058 -4.209 -1.973 2.888 -4.078 1.445 -2.709 ML 52 50 6 55 6 1 8 76 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 7 76 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 3 73 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 9 77 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 10 77 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 7 57 U A - - MP 57 56 6 61 6 2 12 76 110 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -5.088 -4.926 -4.821 -1.169 -3.591 -5.299 0.746 -4.342 -4.819 -1.020 -5.147 -2.798 3.631 -5.196 -1.246 -3.531 ML 58 56 6 61 6 1 7 74 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 6 74 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 3 71 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 9 75 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 9 75 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 8 56 G C - - MP 63 62 6 67 6 2 11 74 108 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 64 62 6 67 6 1 6 73 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 5 72 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 2 70 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 8 74 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 8 73 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 55 U G - - MP 69 68 6 73 4 2 9 72 106 -7.322 -7.529 -0.041 -5.943 -4.798 -4.746 -4.341 -1.021 -2.910 -4.657 1.387 -3.739 -4.390 -0.944 -4.612 -2.731 0.451 -4.814 3.358 -3.229 ML 70 68 6 73 4 1 5 71 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 3 71 105 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 2 69 104 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 7 72 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 7 72 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - C - - - ML 75 74 6 77 3 1 7 70 104 -8.315 -0.016 -6.969 -2.599 1.792 -3.425 -1.847 D 76 74 6 77 3 0 1 68 102 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 6 71 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - G - - - ML 78 77 3 80 3 1 7 69 103 -8.315 -0.016 -6.969 -2.306 -3.625 1.845 -3.008 D 79 77 3 80 3 0 1 67 101 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 5 70 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 12 - G - - - ML 81 80 3 83 3 1 6 68 102 -8.315 -0.016 -6.969 -2.306 -3.625 1.845 -3.008 D 82 80 3 83 3 0 0 66 100 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 5 69 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 13 - U - - - ML 84 83 3 86 3 1 5 67 101 -8.315 -0.016 -6.969 -2.153 -2.036 -2.913 1.765 D 85 83 3 86 3 0 0 65 99 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 68 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 14 - U - - - ML 87 86 3 89 3 1 4 66 100 -8.685 -0.015 -7.003 -2.153 -2.036 -2.913 1.765 D 88 86 3 89 3 0 0 65 99 -5.620 -0.734 -1.403 IL 89 89 3 89 3 1 2 66 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 54 - C - - MR 90 89 3 92 3 1 4 65 99 -8.685 -0.015 -7.003 -2.599 1.792 -3.425 -1.847 D 91 89 3 92 3 0 0 63 97 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 2 65 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 53 - U - - MR 93 92 3 95 3 1 3 64 98 -8.685 -0.015 -7.003 -2.153 -2.036 -2.913 1.765 D 94 92 3 95 3 0 0 62 96 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 64 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 52 - C - - MR 96 95 3 98 3 1 3 63 97 -8.685 -0.015 -7.003 -2.599 1.792 -3.425 -1.847 D 97 95 3 98 3 0 0 61 95 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 64 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 51 - U - - MR 99 98 3 101 3 1 2 62 96 -8.685 -0.015 -7.003 -2.153 -2.036 -2.913 1.765 D 100 98 3 101 3 0 0 60 94 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 63 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 50 - A - - MR 102 101 3 104 3 1 2 61 95 -8.685 -0.015 -7.003 1.835 -3.081 -2.644 -2.696 D 103 101 3 104 3 0 0 59 93 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 62 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 49 - U - - MR 105 104 3 107 5 1 1 60 94 -7.404 -0.031 -7.219 -7.431 -8.323 -2.153 -2.036 -2.913 1.765 D 106 104 3 107 5 0 0 59 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 107 107 3 107 5 1 1 60 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 15 48 G C - - MP 108 107 3 112 6 2 2 59 93 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 109 107 3 112 6 1 1 57 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 1 57 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 0 54 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 58 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 58 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 16 47 G C - - MP 114 113 6 118 6 2 2 57 91 -9.262 -9.201 -0.019 -7.978 -8.258 -8.653 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 115 113 6 118 6 1 1 56 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 55 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 53 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 57 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 56 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 17 46 G C - - MP 120 119 6 124 4 2 2 55 89 -7.322 -7.529 -0.041 -5.943 -5.424 -3.426 -5.621 -0.275 -6.185 -4.949 -1.379 -5.888 -4.745 3.766 -5.039 -1.160 -1.749 -4.907 -3.459 -4.488 ML 121 119 6 124 4 1 1 54 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 1 54 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 0 52 87 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 1 55 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 1 55 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 18 - C - - - ML 126 125 6 128 3 1 1 53 87 -8.315 -0.016 -6.969 -1.197 1.114 -2.050 0.211 D 127 125 6 128 3 0 0 51 85 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 54 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 19 - c - - - ML 129 128 3 131 3 1 1 52 86 -8.315 -0.016 -6.969 -0.581 0.414 0.391 -0.540 D 130 128 3 131 3 0 0 50 84 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 53 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 20 - a - - - ML 132 131 3 134 3 1 1 51 85 -8.315 -0.016 -6.969 0.681 -1.039 -1.235 0.571 D 133 131 3 134 3 0 0 49 83 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 52 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 21 - G - - - ML 135 134 3 137 3 1 1 50 84 -8.315 -0.016 -6.969 -2.306 -3.625 1.845 -3.008 D 136 134 3 137 3 0 0 48 82 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 51 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 22 - u - - - ML 138 137 3 140 3 1 1 49 83 -8.315 -0.016 -6.969 0.540 -1.022 -1.251 0.708 D 139 137 3 140 3 0 0 47 81 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 50 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 23 - g - - - ML 141 140 3 143 3 1 1 48 82 -8.315 -0.016 -6.969 -0.575 0.223 0.580 -0.586 D 142 140 3 143 3 0 0 45 79 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 49 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 24 - g - - - ML 144 143 3 146 3 1 1 47 81 -1.777 -0.514 -6.969 -0.572 -1.179 0.550 0.507 D 145 143 3 146 3 0 0 40 75 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 48 82 -0.779 -1.318 -5.976 0.000 0.000 0.000 0.000 [ MATL 39 ] 28 - u - - - ML 147 146 3 149 3 1 1 32 51 -8.315 -0.016 -6.969 -1.016 0.664 -1.835 0.714 D 148 146 3 149 3 0 0 31 50 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 29 - a - - - ML 150 149 3 152 3 1 1 31 50 -8.315 -0.016 -6.969 0.848 -1.726 0.535 -1.157 D 151 149 3 152 3 0 0 30 49 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 30 - C - - - ML 153 152 3 155 3 1 1 30 49 -8.315 -0.016 -6.969 -0.049 1.038 -1.689 -0.579 D 154 152 3 155 3 0 0 29 48 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 31 - A - - - ML 156 155 3 158 3 1 1 29 48 -8.315 -0.016 -6.969 1.230 -1.784 -0.081 -1.254 D 157 155 3 158 3 0 0 28 47 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - u - - - ML 159 158 3 161 3 1 1 28 47 -8.315 -0.016 -6.969 -1.008 0.513 -1.815 0.841 D 160 158 3 161 3 0 0 27 46 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - c - - - ML 162 161 3 164 3 1 1 27 45 -8.315 -0.016 -6.969 -0.453 0.329 -0.286 0.255 D 163 161 3 164 3 0 0 26 45 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - U - - - ML 165 164 3 167 3 1 1 25 44 -8.315 -0.016 -6.969 -1.113 -0.067 -1.886 1.210 D 166 164 3 167 3 0 0 24 43 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - u - - - ML 168 167 3 170 3 1 1 24 43 -8.315 -0.016 -6.969 -1.008 0.513 -1.815 0.841 D 169 167 3 170 3 0 0 23 42 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - g - - - ML 171 170 3 173 3 1 1 23 42 -8.315 -0.016 -6.969 0.208 -0.320 0.403 -0.470 D 172 170 3 173 3 0 0 22 41 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 37 - U - - - ML 174 173 3 176 3 1 1 22 41 -8.315 -0.016 -6.969 -2.153 -2.036 -2.913 1.765 D 175 173 3 176 3 0 0 21 40 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 38 - a - - - ML 177 176 3 179 3 1 1 21 40 -8.315 -0.016 -6.969 0.628 0.456 -1.379 -0.518 D 178 176 3 179 3 0 0 20 39 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 39 - c - - - ML 180 179 3 182 3 1 1 20 38 -8.315 -0.016 -6.969 -0.581 0.414 0.391 -0.540 D 181 179 3 182 3 0 0 19 38 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 40 - c - - - ML 183 182 3 185 3 1 1 19 37 -8.315 -0.016 -6.969 -0.581 0.414 0.391 -0.540 D 184 182 3 185 3 0 0 18 37 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 41 - U - - - ML 186 185 3 188 3 1 1 17 36 -8.315 -0.016 -6.969 -2.153 -2.036 -2.913 1.765 D 187 185 3 188 3 0 0 17 36 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 42 - a - - - ML 189 188 3 191 3 1 1 16 34 -8.315 -0.016 -6.969 0.710 -1.748 0.699 -1.175 D 190 188 3 191 3 0 0 16 34 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 43 - C - - - ML 192 191 3 194 3 1 1 15 33 -8.315 -0.016 -6.969 -1.197 1.114 -2.050 0.211 D 193 191 3 194 3 0 0 15 33 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 44 - a - - - ML 195 194 3 197 3 1 1 13 31 -8.315 -0.016 -6.969 0.848 -1.726 0.535 -1.157 D 196 194 3 197 3 0 0 13 32 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 45 - A - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 1.268 -1.804 -0.161 -1.281 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs2H1 ACC RF01525 DESC Trypanosomatid snoRNA TB10Cs2H1 LENG 66 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 23:02:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01525/CM NSEQ 4 EFFN 3.417969 CKSUM 2860072125 STATS LOCAL MSV -8.0123 0.71935 STATS LOCAL VITERBI -8.8730 0.71935 STATS LOCAL FORWARD -3.2946 0.71935 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.62884 1.25483 1.34611 1.35298 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 1.37678 0.66244 2.61669 1.83901 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 2.88624 3.69295 0.11332 3.63242 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 2.88632 3.69306 0.11331 3.63258 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 2.37067 0.51711 2.97729 1.34935 4 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 2.88776 3.69507 0.11308 3.63531 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 2.81506 1.66212 2.60391 0.39100 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 3.53278 2.33769 3.33851 0.17586 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 2.88532 3.69167 0.11347 3.63068 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 3.33196 1.81334 3.17562 0.27523 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 3.39432 0.11792 3.95731 2.83779 10 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 3.15398 4.08609 0.08924 3.65392 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 12 3.15398 4.08609 0.08924 3.65392 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 13 3.04661 2.93857 3.57811 0.13741 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 3.04661 2.93857 3.57811 0.13741 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 2.88619 3.69289 0.11333 3.63234 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 2.88629 3.69303 0.11331 3.63253 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 2.88573 3.69223 0.11340 3.63145 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 2.31435 0.57772 2.91764 1.25200 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 1.85774 1.06676 1.08190 1.82697 19 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 0.89732 2.15822 2.29321 0.97852 20 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 3.15398 4.08609 0.08924 3.65392 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 0.99933 2.14753 2.30500 0.87865 22 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 1.85350 1.20691 0.94402 1.86349 23 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 24 1.84055 2.26465 0.97295 1.02322 24 g - - _ 1.38629 1.38629 1.38629 1.38629 0.40840 1.14206 4.12713 1.11227 0.39870 1.09861 0.40547 25 2.17549 0.89509 2.75289 0.88157 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 0.77808 2.68038 0.99114 2.29242 29 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 1.43829 0.62349 2.65404 1.85641 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 0.50768 2.72412 1.43272 2.36609 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 2.16913 1.00359 2.73749 0.78871 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 30 1.74334 1.13278 1.57687 1.21636 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 2.25152 1.42902 2.79186 0.52103 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 2.16913 1.00359 2.73749 0.78871 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 1.25036 1.60218 1.07867 1.75972 36 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 3.04661 2.93857 3.57811 0.13741 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 0.93449 1.04042 2.41366 1.80534 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 1.85774 1.06676 1.08190 1.82697 39 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 1.85774 1.06676 1.08190 1.82697 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 3.04661 2.93857 3.57811 0.13741 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 0.87780 2.69511 0.87484 2.30421 42 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 2.31435 0.57772 2.91764 1.25200 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 0.77808 2.68038 0.99114 2.29242 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 0.48130 2.73830 1.49029 2.38563 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 3.81623 0.13575 3.54152 2.57751 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 3.82456 0.13528 3.54551 2.57904 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 3.83670 0.13460 3.55130 2.58125 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 3.04661 2.93857 3.57811 0.13741 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 0.09516 3.69601 3.37804 3.44718 50 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 3.04661 2.93857 3.57811 0.13741 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 3.39432 0.11792 3.95731 2.83779 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 50 3.04661 2.93857 3.57811 0.13741 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 51 3.39432 0.11792 3.95731 2.83779 54 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 52 2.39850 3.35973 0.18890 3.06762 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 53 3.81116 0.13604 3.53908 2.57658 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 54 0.19931 3.53367 2.17388 3.27625 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 55 0.69046 2.77221 1.01977 2.58428 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 56 3.83837 0.13450 3.55210 2.58155 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 57 2.34276 0.54545 2.94796 1.30229 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 58 3.82459 0.13528 3.54553 2.57905 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 59 3.83675 0.13459 3.55132 2.58126 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 60 1.74334 1.13278 1.57687 1.21636 63 c - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 61 0.09516 3.69601 3.37804 3.44718 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 62 3.15398 4.08609 0.08924 3.65392 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 63 0.09516 3.69601 3.37804 3.44718 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 64 0.89732 2.15822 2.29321 0.97852 67 a - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 65 2.17549 0.89509 2.75289 0.88157 68 u - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 66 1.37678 0.66244 2.61669 1.83901 69 C - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //