INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs1H2 ACC RF01523 DESC Trypanosomatid snoRNA TB10Cs1H2 STATES 193 NODES 46 CLEN 63 W 84 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 06:23:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01523/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.124023 CKSUM 3591376794 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 67.40 NC 47.40 EFP7GF -9.6643 0.71924 ECMLC 0.64327 -6.07551 2.98952 1600000 408929 0.002934 ECMGC 0.44266 -16.09743 -2.79683 1600000 144218 0.002774 ECMLI 0.62366 -4.89164 4.13090 1600000 333399 0.003599 ECMGI 0.45319 -11.92633 0.20040 1600000 97458 0.004104 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 84 106 -7.026 -7.233 -0.050 -5.647 IL 1 1 2 1 4 1 15 87 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 14 86 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 14 84 106 -8.422 -0.018 -6.740 1.749 -2.518 -2.135 -2.075 D 4 2 3 5 3 0 8 83 105 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 13 85 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - c - - MR 6 5 3 8 3 1 13 83 105 -8.422 -0.018 -6.740 -0.419 0.484 0.086 -0.337 D 7 5 3 8 3 0 6 81 104 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 12 84 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - A - - MR 9 8 3 11 3 1 12 82 104 -8.422 -0.018 -6.740 1.749 -2.518 -2.135 -2.075 D 10 8 3 11 3 0 5 80 103 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 11 83 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - G - - MR 12 11 3 14 3 1 12 81 103 -8.422 -0.018 -6.740 -1.735 -2.978 1.756 -2.366 D 13 11 3 14 3 0 5 79 102 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 10 82 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - A - - MR 15 14 3 17 3 1 11 80 102 -8.422 -0.018 -6.740 1.749 -2.518 -2.135 -2.075 D 16 14 3 17 3 0 4 78 101 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 9 81 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 63 - G - - MR 18 17 3 20 5 1 10 79 101 -7.157 -0.037 -6.972 -7.184 -8.076 -0.074 -1.803 1.222 -1.215 D 19 17 3 20 5 0 3 78 100 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 7 79 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 2 62 G C - - MP 21 20 3 25 6 2 11 78 100 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.887 -3.163 -5.001 0.103 -5.437 -4.750 -0.765 -5.253 -4.421 3.671 -4.748 -0.868 -1.147 -4.563 -2.811 -3.875 ML 22 20 3 25 6 1 5 76 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 5 76 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 1 74 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 6 78 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 7 77 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 61 C G - - MP 27 26 6 31 6 2 9 76 98 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.710 -4.630 -4.373 -0.848 -3.056 -4.763 3.598 -3.882 -4.428 -0.630 -4.671 -2.580 0.441 -4.769 -0.767 -3.262 ML 28 26 6 31 6 1 4 74 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 4 74 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 72 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 6 76 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 6 75 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 4 60 g c - - MP 33 32 6 37 6 2 8 74 96 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.530 -2.515 -3.566 2.324 -4.025 -4.483 0.375 -3.835 -3.556 2.692 -4.027 -0.115 0.071 -3.737 -1.576 -2.457 ML 34 32 6 37 6 1 3 73 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 3 72 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 70 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 5 74 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 5 73 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 59 C G - - MP 39 38 6 43 4 2 6 72 94 -6.936 -8.181 -0.077 -4.635 -4.710 -4.630 -4.373 -0.848 -3.056 -4.763 3.598 -3.882 -4.428 -0.630 -4.671 -2.580 0.441 -4.769 -0.767 -3.262 ML 40 38 6 43 4 1 2 71 94 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 1 3 71 93 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 42 38 6 43 4 0 0 69 92 -12.737 -14.007 -2.036 -0.404 IL 43 43 5 43 4 1 3 71 94 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 4 72 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 58 - c - - MR 45 44 6 47 5 1 6 70 92 -7.157 -0.037 -6.972 -7.184 -8.076 -0.793 0.699 -1.591 0.553 D 46 44 6 47 5 0 0 69 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 47 47 3 47 5 1 3 70 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 57 U A - - MP 48 47 3 52 6 2 7 69 91 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.362 -4.192 -4.181 -0.474 -3.087 -4.730 1.245 -3.795 -4.185 -0.245 -4.549 -2.085 3.404 -4.507 -0.759 -2.991 ML 49 47 3 52 6 1 2 67 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 3 52 6 1 2 67 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 3 52 6 0 0 65 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 2 69 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 3 68 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 7 56 C G - - MP 54 53 6 58 6 2 6 67 89 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.710 -4.630 -4.373 -0.848 -3.056 -4.763 3.598 -3.882 -4.428 -0.630 -4.671 -2.580 0.441 -4.769 -0.767 -3.262 ML 55 53 6 58 6 1 1 65 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 65 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 63 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 2 67 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 2 66 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 8 55 A U - - MP 60 59 6 64 6 2 4 65 87 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.924 -2.922 -3.933 3.411 -4.338 -5.413 -0.029 -3.966 -3.819 0.935 -4.373 -0.377 -0.446 -4.578 -1.969 -2.759 ML 61 59 6 64 6 1 1 63 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 63 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 61 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 65 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 2 64 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 9 54 U G - - MP 66 65 6 70 4 2 3 63 85 -2.065 -7.233 -0.445 -5.647 -4.243 -4.169 -3.910 -0.489 -2.621 -4.310 1.669 -3.408 -3.952 -0.322 -4.228 -2.166 0.799 -4.313 3.096 -2.815 ML 67 65 6 70 4 1 1 62 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 61 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 60 83 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 2 62 85 -2.734 -3.417 -0.436 -5.903 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 1 63 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - U - - - ML 72 71 6 74 3 1 2 60 83 -8.037 -0.020 -6.691 -1.621 -1.593 -2.361 1.655 D 73 71 6 74 3 0 0 58 81 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 12 - U - - - ML 75 74 3 77 3 1 2 59 82 -8.037 -0.020 -6.691 -1.621 -1.593 -2.361 1.655 D 76 74 3 77 3 0 0 57 80 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 13 - C - - - ML 78 77 3 80 3 1 1 58 81 -8.037 -0.020 -6.691 -1.918 1.669 -2.746 -1.296 D 79 77 3 80 3 0 0 56 79 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - A - - - ML 81 80 3 83 3 1 1 57 79 -8.037 -0.020 -6.691 1.749 -2.518 -2.135 -2.075 D 82 80 3 83 3 0 0 55 78 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - A - - - ML 84 83 3 86 3 1 1 56 78 -8.422 -0.018 -6.740 1.749 -2.518 -2.135 -2.075 D 85 83 3 86 3 0 0 55 77 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 1 57 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 53 - G - - MR 87 86 3 89 3 1 1 55 77 -8.422 -0.018 -6.740 -1.735 -2.978 1.756 -2.366 D 88 86 3 89 3 0 0 53 76 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 56 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 52 - G - - MR 90 89 3 92 3 1 1 54 76 -8.422 -0.018 -6.740 -1.735 -2.978 1.756 -2.366 D 91 89 3 92 3 0 0 52 75 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 55 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 51 - C - - MR 93 92 3 95 5 1 1 53 75 -7.157 -0.037 -6.972 -7.184 -8.076 -1.918 1.669 -2.746 -1.296 D 94 92 3 95 5 0 0 52 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 53 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 50 G U - - MP 96 95 3 100 6 2 2 52 74 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.710 -2.451 -3.885 1.074 -4.678 -5.404 -0.265 -3.895 -3.522 1.229 -4.049 3.176 -0.622 -4.590 -2.208 -2.566 ML 97 95 3 100 6 1 1 50 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 50 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 48 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 52 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 51 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 49 C G - - MP 102 101 6 106 6 2 2 50 72 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.710 -4.630 -4.373 -0.848 -3.056 -4.763 3.598 -3.882 -4.428 -0.630 -4.671 -2.580 0.441 -4.769 -0.767 -3.262 ML 103 101 6 106 6 1 1 48 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 48 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 46 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 50 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 49 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 48 c g - - MP 108 107 6 112 6 2 2 48 70 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.830 -3.819 -3.659 -0.114 -2.529 -4.172 2.891 -3.272 -3.683 0.088 -4.042 -1.868 1.069 -3.949 1.721 -2.560 ML 109 107 6 112 6 1 1 46 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 46 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 44 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 48 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 47 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 47 G C - - MP 114 113 6 118 6 2 2 46 68 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.646 -2.515 -3.648 1.504 -4.264 -4.372 0.227 -4.027 -3.694 3.032 -4.108 0.740 -0.051 -3.680 -1.730 -2.569 ML 115 113 6 118 6 1 1 44 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 44 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 42 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 46 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 45 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 46 C G - - MP 120 119 6 124 6 2 2 44 66 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.906 -3.880 -3.717 -0.141 -2.555 -4.219 3.104 -3.306 -3.739 0.070 -4.090 -1.899 1.057 -4.014 1.138 -2.603 ML 121 119 6 124 6 1 1 42 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 42 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 44 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 43 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 45 g c - - MP 126 125 6 130 4 2 2 42 64 -2.065 -7.233 -0.445 -5.647 -2.688 -2.274 -2.789 1.833 -2.848 -3.636 1.095 -0.255 -2.864 2.281 -3.369 -0.209 0.812 -2.912 -0.710 -1.856 ML 127 125 6 130 4 1 1 40 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 39 61 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 38 60 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 1 42 64 -1.185 -1.314 -2.766 -6.503 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 36 55 -2.052 -0.471 -4.752 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - C - - - ML 132 131 6 134 5 1 1 34 53 -7.157 -0.037 -6.972 -7.184 -8.076 -1.918 1.669 -2.746 -1.296 D 133 131 6 134 5 0 0 33 52 -4.959 -0.803 -4.221 -2.596 -2.508 IL 134 134 3 134 5 1 1 34 53 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 43 G C - - MP 135 134 3 139 6 2 2 33 52 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.887 -3.163 -5.001 0.103 -5.437 -4.750 -0.765 -5.253 -4.421 3.671 -4.748 -0.868 -1.147 -4.563 -2.811 -3.875 ML 136 134 3 139 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 42 g c - - MP 141 140 6 145 6 2 2 31 50 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -3.530 -2.515 -3.566 2.324 -4.025 -4.483 0.375 -3.835 -3.556 2.692 -4.027 -0.115 0.071 -3.737 -1.576 -2.457 ML 142 140 6 145 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 41 G C - - MP 147 146 6 151 6 2 2 29 48 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.887 -3.163 -5.001 0.103 -5.437 -4.750 -0.765 -5.253 -4.421 3.671 -4.748 -0.868 -1.147 -4.563 -2.811 -3.875 ML 148 146 6 151 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 28 40 C G - - MP 153 152 6 157 6 2 2 27 46 -9.138 -9.077 -0.021 -7.853 -8.133 -8.528 -4.710 -4.630 -4.373 -0.848 -3.056 -4.763 3.598 -3.882 -4.428 -0.630 -4.671 -2.580 0.441 -4.769 -0.767 -3.262 ML 154 152 6 157 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 39 a u - - MP 159 158 6 163 4 2 2 25 44 -7.026 -7.233 -0.050 -5.647 -2.847 -2.490 -2.962 2.451 -2.890 -3.925 1.025 1.083 -2.951 1.147 -3.488 -0.364 0.663 -3.222 -0.784 -1.994 ML 160 158 6 163 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 25 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 24 43 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - U - - - ML 165 164 6 167 3 1 1 22 41 -8.037 -0.020 -6.691 -0.149 -0.942 -1.349 1.128 D 166 164 6 167 3 0 0 21 40 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - a - - - ML 168 167 3 170 3 1 1 21 40 -8.037 -0.020 -6.691 0.906 -1.448 0.279 -0.872 D 169 167 3 170 3 0 0 20 39 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - a - - - ML 171 170 3 173 3 1 1 20 39 -8.037 -0.020 -6.691 0.729 -0.337 -1.029 0.085 D 172 170 3 173 3 0 0 19 38 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - u - - - ML 174 173 3 176 3 1 1 19 37 -8.037 -0.020 -6.691 0.123 -0.861 0.077 0.386 D 175 173 3 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - c - - - ML 177 176 3 179 3 1 1 17 36 -8.037 -0.020 -6.691 -0.419 0.484 0.086 -0.337 D 178 176 3 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - g - - - ML 180 179 3 182 3 1 1 16 35 -8.037 -0.020 -6.691 -0.395 -0.041 0.618 -0.448 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 36 - U - - - ML 183 182 3 185 3 1 1 15 33 -8.037 -0.020 -6.691 -0.149 -0.942 -1.349 1.128 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 37 - G - - - ML 186 185 3 188 3 1 1 13 31 -8.037 -0.020 -6.691 -1.735 -2.978 1.756 -2.366 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 38 - u - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -0.420 -0.933 0.083 0.739 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs1H2 ACC RF01523 DESC Trypanosomatid snoRNA TB10Cs1H2 LENG 63 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 06:23:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01523/CM NSEQ 5 EFFN 3.100586 CKSUM 3591376794 STATS LOCAL MSV -8.2953 0.71924 STATS LOCAL VITERBI -8.6995 0.71924 STATS LOCAL FORWARD -3.3548 0.71924 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.58583 1.33274 1.14804 1.54079 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 0.00000 * 1 0.10825 3.57395 3.26655 3.31269 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 2 2.80420 3.57416 0.12604 3.51243 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 3 3.54860 0.16911 3.36186 2.38438 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 4 0.97892 2.65357 0.74845 2.51599 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 5 3.54614 0.16929 3.36058 2.38392 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 6 3.34451 2.20832 3.14952 0.20830 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 7 3.52840 0.17065 3.35130 2.38060 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 8 0.22814 3.19254 2.13680 3.10366 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 9 3.22750 1.74752 3.06084 0.30206 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.33335 1.32447 4.04322 0.12706 2.12593 1.09861 0.40547 10 2.92846 2.83939 3.45677 0.15487 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 11 2.92846 2.83939 3.45677 0.15487 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 12 3.24996 0.13552 3.82002 2.71754 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 13 0.10825 3.57395 3.26655 3.31269 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 14 0.10825 3.57395 3.26655 3.31269 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 15 2.08054 3.23205 0.23645 3.07396 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 16 3.54880 0.16909 3.36196 2.38442 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 17 2.92261 0.65510 2.71650 1.01968 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 18 1.60920 2.68121 0.42775 2.53204 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 19 2.92162 0.49840 2.70975 1.30159 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 20 1.28744 1.67498 0.92695 1.95933 21 g - - < 1.38629 1.38629 1.38629 1.38629 0.33335 1.32447 4.04322 0.73948 0.64887 1.09861 0.40547 21 3.24996 0.13552 3.82002 2.71754 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 22 2.80361 3.57336 0.12614 3.51133 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 23 0.97896 2.65304 0.74861 2.51528 26 g - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 24 2.80221 3.57147 0.12638 3.50877 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 25 3.54166 0.16963 3.35824 2.38309 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 26 0.85104 1.20863 1.80659 2.20538 29 a - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 27 1.54910 2.20566 2.50733 0.51769 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 28 0.69776 2.60892 1.13843 2.22223 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 29 0.83047 1.62134 2.20833 1.36008 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 30 1.31850 2.07392 1.28948 1.10456 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 31 1.83623 0.94907 1.26474 1.76509 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 32 1.82036 1.37641 0.84078 1.86965 35 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 33 1.54910 2.20566 2.50733 0.51769 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 34 3.03595 3.95540 0.10156 3.52690 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 35 1.80567 2.16525 1.28281 0.81270 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 36 2.43365 2.07496 2.08113 0.41259 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 37 2.65996 3.52051 0.14657 3.30219 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 38 3.67694 0.15214 3.40651 2.49287 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 39 2.74055 0.84750 2.45858 0.86411 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 40 3.64754 0.15411 3.39238 2.48723 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.33335 1.32447 4.04322 0.12706 2.12593 1.09861 0.40547 41 2.19219 1.03558 1.89840 0.95842 45 u - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 42 2.09615 2.87202 0.28492 2.68223 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 43 2.77729 0.59947 2.49131 1.18454 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 44 2.10004 2.87916 0.28344 2.68561 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 45 2.66908 3.53436 0.14470 3.31802 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 46 3.29157 2.18373 3.03015 0.22080 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 47 3.24996 0.13552 3.82002 2.71754 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 48 3.03595 3.95540 0.10156 3.52690 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 49 3.03595 3.95540 0.10156 3.52690 53 G - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 50 2.32278 3.24462 0.20874 2.96796 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 51 3.32935 2.47080 3.00426 0.18622 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 52 2.66535 3.52868 0.14546 3.31153 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 53 0.23324 3.35735 2.04766 3.11967 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 54 2.13802 0.80869 2.71732 0.99258 58 c - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 55 2.66532 3.52864 0.14547 3.31148 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 56 2.75333 0.84575 2.46355 0.86295 60 c - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 57 2.66905 3.53430 0.14471 3.31796 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 58 3.72210 0.14922 3.42780 2.50127 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 59 1.50137 2.89680 0.44548 2.50770 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 60 0.10825 3.57395 3.26655 3.31269 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 61 3.03595 3.95540 0.10156 3.52690 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 62 0.10825 3.57395 3.26655 3.31269 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 63 1.83623 0.94907 1.26474 1.76509 67 c - - : 1.38629 1.38629 1.38629 1.38629 0.01802 4.02553 * 1.46634 0.26236 0.00000 * //