INFERNAL1/a [1.1.4 | Dec 2020] NAME TB10Cs1H2 ACC RF01523 DESC Trypanosomatid snoRNA TB10Cs1H2 STATES 193 NODES 46 CLEN 63 W 84 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:26:12 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.114258 CKSUM 3591376794 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 69.60 NC 35.70 EFP7GF -9.6749 0.71923 ECMLC 0.64363 -6.07319 2.99291 1600000 410564 0.002923 ECMGC 0.43697 -16.24347 -2.77627 1600000 143799 0.002782 ECMLI 0.62603 -4.84762 4.14089 1600000 333423 0.003599 ECMGI 0.45007 -11.96048 0.24591 1600000 97265 0.004112 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 84 107 -7.022 -7.229 -0.050 -5.643 IL 1 1 2 1 4 1 14 87 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 14 87 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 14 84 107 -8.419 -0.018 -6.737 1.747 -2.511 -2.129 -2.067 D 4 2 3 5 3 0 8 83 105 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 13 85 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - c - - MR 6 5 3 8 3 1 13 83 106 -8.419 -0.018 -6.737 -0.405 0.428 0.148 -0.338 D 7 5 3 8 3 0 6 81 104 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 12 84 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - A - - MR 9 8 3 11 3 1 12 82 105 -8.419 -0.018 -6.737 1.747 -2.511 -2.129 -2.067 D 10 8 3 11 3 0 5 80 103 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 11 83 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - G - - MR 12 11 3 14 3 1 12 81 104 -8.419 -0.018 -6.737 -1.727 -2.970 1.755 -2.357 D 13 11 3 14 3 0 5 79 102 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 10 82 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - A - - MR 15 14 3 17 3 1 11 80 103 -8.419 -0.018 -6.737 1.747 -2.511 -2.129 -2.067 D 16 14 3 17 3 0 4 78 101 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 9 81 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 63 - G - - MR 18 17 3 20 5 1 10 79 102 -7.154 -0.037 -6.969 -7.181 -8.073 -0.103 -1.817 1.238 -1.229 D 19 17 3 20 5 0 3 78 100 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 7 79 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 2 62 G C - - MP 21 20 3 25 6 2 11 78 101 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.880 -3.160 -4.993 0.107 -5.427 -4.747 -0.757 -5.245 -4.417 3.670 -4.744 -0.865 -1.139 -4.558 -2.802 -3.868 ML 22 20 3 25 6 1 5 76 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 5 76 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 1 74 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 6 78 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 7 77 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 61 C G - - MP 27 26 6 31 6 2 9 76 99 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.703 -4.622 -4.367 -0.840 -3.051 -4.758 3.596 -3.877 -4.421 -0.621 -4.665 -2.571 0.447 -4.762 -0.762 -3.256 ML 28 26 6 31 6 1 4 75 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 4 74 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 72 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 6 76 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 6 75 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 4 60 g c - - MP 33 32 6 37 6 2 8 74 97 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.540 -2.517 -3.573 2.278 -4.035 -4.472 0.372 -3.848 -3.566 2.729 -4.033 -0.120 0.068 -3.732 -1.580 -2.466 ML 34 32 6 37 6 1 3 73 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 3 73 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 70 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 5 74 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 5 73 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 59 C G - - MP 39 38 6 43 4 2 6 72 95 -6.932 -8.178 -0.077 -4.631 -4.703 -4.622 -4.367 -0.840 -3.051 -4.758 3.596 -3.877 -4.421 -0.621 -4.665 -2.571 0.447 -4.762 -0.762 -3.256 ML 40 38 6 43 4 1 2 71 94 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 1 3 71 94 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 42 38 6 43 4 0 0 69 92 -12.737 -14.007 -2.036 -0.404 IL 43 43 5 43 4 1 3 71 94 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 4 72 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 58 - c - - MR 45 44 6 47 5 1 6 70 93 -7.154 -0.037 -6.969 -7.181 -8.073 -0.780 0.653 -1.575 0.594 D 46 44 6 47 5 0 0 69 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 47 47 3 47 5 1 3 70 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 57 U A - - MP 48 47 3 52 6 2 7 69 92 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.354 -4.183 -4.174 -0.466 -3.081 -4.723 1.250 -3.788 -4.177 -0.236 -4.542 -2.077 3.401 -4.499 -0.754 -2.985 ML 49 47 3 52 6 1 2 67 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 3 52 6 1 2 67 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 3 52 6 0 0 65 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 2 69 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 3 68 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 7 56 C G - - MP 54 53 6 58 6 2 6 67 90 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.703 -4.622 -4.367 -0.840 -3.051 -4.758 3.596 -3.877 -4.421 -0.621 -4.665 -2.571 0.447 -4.762 -0.762 -3.256 ML 55 53 6 58 6 1 1 66 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 65 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 63 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 2 67 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 2 66 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 8 55 A U - - MP 60 59 6 64 6 2 4 65 88 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.918 -2.917 -3.927 3.408 -4.328 -5.403 -0.020 -3.960 -3.813 0.942 -4.367 -0.373 -0.437 -4.570 -1.960 -2.753 ML 61 59 6 64 6 1 1 64 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 63 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 61 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 65 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 2 64 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 9 54 U G - - MP 66 65 6 70 4 2 3 63 86 -1.999 -7.229 -0.468 -5.643 -4.235 -4.162 -3.904 -0.482 -2.618 -4.305 1.672 -3.404 -3.946 -0.314 -4.223 -2.158 0.803 -4.307 3.092 -2.810 ML 67 65 6 70 4 1 1 62 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 61 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 60 83 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 2 62 85 -2.768 -3.451 -0.424 -5.936 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 1 63 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - U - - - ML 72 71 6 74 3 1 2 60 83 -8.033 -0.020 -6.687 -1.614 -1.588 -2.354 1.653 D 73 71 6 74 3 0 0 59 81 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 12 - U - - - ML 75 74 3 77 3 1 2 59 82 -8.033 -0.020 -6.687 -1.614 -1.588 -2.354 1.653 D 76 74 3 77 3 0 0 58 80 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 13 - C - - - ML 78 77 3 80 3 1 1 58 81 -8.033 -0.020 -6.687 -1.909 1.667 -2.738 -1.289 D 79 77 3 80 3 0 0 57 79 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - A - - - ML 81 80 3 83 3 1 1 57 80 -8.033 -0.020 -6.687 1.747 -2.511 -2.129 -2.067 D 82 80 3 83 3 0 0 56 78 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - A - - - ML 84 83 3 86 3 1 1 56 79 -8.419 -0.018 -6.737 1.747 -2.511 -2.129 -2.067 D 85 83 3 86 3 0 0 55 77 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 1 57 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 53 - G - - MR 87 86 3 89 3 1 1 55 78 -8.419 -0.018 -6.737 -1.727 -2.970 1.755 -2.357 D 88 86 3 89 3 0 0 53 76 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 56 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 52 - G - - MR 90 89 3 92 3 1 1 54 77 -8.419 -0.018 -6.737 -1.727 -2.970 1.755 -2.357 D 91 89 3 92 3 0 0 53 75 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 55 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 51 - C - - MR 93 92 3 95 5 1 1 53 76 -7.154 -0.037 -6.969 -7.181 -8.073 -1.909 1.667 -2.738 -1.289 D 94 92 3 95 5 0 0 52 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 53 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 50 G U - - MP 96 95 3 100 6 2 2 52 75 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.706 -2.448 -3.880 1.077 -4.669 -5.395 -0.258 -3.891 -3.519 1.236 -4.045 3.172 -0.614 -4.583 -2.200 -2.562 ML 97 95 3 100 6 1 1 51 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 50 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 48 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 52 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 51 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 49 C G - - MP 102 101 6 106 6 2 2 50 73 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.703 -4.622 -4.367 -0.840 -3.051 -4.758 3.596 -3.877 -4.421 -0.621 -4.665 -2.571 0.447 -4.762 -0.762 -3.256 ML 103 101 6 106 6 1 1 49 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 48 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 46 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 50 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 49 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 48 c g - - MP 108 107 6 112 6 2 2 48 71 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.826 -3.814 -3.656 -0.107 -2.527 -4.170 2.906 -3.269 -3.680 0.095 -4.039 -1.861 1.073 -3.945 1.680 -2.556 ML 109 107 6 112 6 1 1 47 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 46 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 44 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 48 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 47 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 47 G C - - MP 114 113 6 118 6 2 2 46 69 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.660 -2.523 -3.662 1.481 -4.279 -4.376 0.216 -4.042 -3.704 3.050 -4.117 0.709 -0.062 -3.690 -1.742 -2.583 ML 115 113 6 118 6 1 1 45 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 44 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 42 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 46 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 45 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 46 C G - - MP 120 119 6 124 6 2 2 44 67 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.908 -3.882 -3.719 -0.141 -2.555 -4.220 3.113 -3.307 -3.741 0.071 -4.091 -1.900 1.057 -4.016 1.104 -2.604 ML 121 119 6 124 6 1 1 42 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 42 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 44 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 43 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 45 g c - - MP 126 125 6 130 4 2 2 42 65 -1.999 -7.229 -0.468 -5.643 -2.680 -2.272 -2.783 1.861 -2.838 -3.630 1.100 -0.300 -2.857 2.262 -3.362 -0.210 0.817 -2.906 -0.703 -1.850 ML 127 125 6 130 4 1 1 40 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 39 61 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 38 61 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 1 42 64 -1.180 -1.303 -2.810 -6.548 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 36 55 -2.074 -0.462 -4.774 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - C - - - ML 132 131 6 134 5 1 1 34 53 -7.154 -0.037 -6.969 -7.181 -8.073 -1.909 1.667 -2.738 -1.289 D 133 131 6 134 5 0 0 33 52 -4.959 -0.803 -4.221 -2.596 -2.508 IL 134 134 3 134 5 1 1 34 53 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 43 G C - - MP 135 134 3 139 6 2 2 33 52 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.880 -3.160 -4.993 0.107 -5.427 -4.747 -0.757 -5.245 -4.417 3.670 -4.744 -0.865 -1.139 -4.558 -2.802 -3.868 ML 136 134 3 139 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 42 g c - - MP 141 140 6 145 6 2 2 31 50 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.540 -2.517 -3.573 2.278 -4.035 -4.472 0.372 -3.848 -3.566 2.729 -4.033 -0.120 0.068 -3.732 -1.580 -2.466 ML 142 140 6 145 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 41 G C - - MP 147 146 6 151 6 2 2 29 48 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.880 -3.160 -4.993 0.107 -5.427 -4.747 -0.757 -5.245 -4.417 3.670 -4.744 -0.865 -1.139 -4.558 -2.802 -3.868 ML 148 146 6 151 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 28 40 C G - - MP 153 152 6 157 6 2 2 27 46 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.703 -4.622 -4.367 -0.840 -3.051 -4.758 3.596 -3.877 -4.421 -0.621 -4.665 -2.571 0.447 -4.762 -0.762 -3.256 ML 154 152 6 157 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 39 a u - - MP 159 158 6 163 4 2 2 25 44 -7.022 -7.229 -0.050 -5.643 -2.843 -2.483 -2.959 2.404 -2.881 -3.922 1.039 1.166 -2.945 1.151 -3.482 -0.354 0.673 -3.220 -0.773 -1.988 ML 160 158 6 163 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 25 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 24 43 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - U - - - ML 165 164 6 167 3 1 1 22 41 -8.033 -0.020 -6.687 -0.171 -0.946 -1.359 1.139 D 166 164 6 167 3 0 0 21 40 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - a - - - ML 168 167 3 170 3 1 1 21 40 -8.033 -0.020 -6.687 0.867 -1.444 0.333 -0.865 D 169 167 3 170 3 0 0 20 39 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - a - - - ML 171 170 3 173 3 1 1 20 39 -8.033 -0.020 -6.687 0.691 -0.304 -1.023 0.115 D 172 170 3 173 3 0 0 19 38 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - u - - - ML 174 173 3 176 3 1 1 19 37 -8.033 -0.020 -6.687 0.108 -0.852 0.041 0.422 D 175 173 3 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - c - - - ML 177 176 3 179 3 1 1 17 36 -8.033 -0.020 -6.687 -0.405 0.428 0.148 -0.338 D 178 176 3 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - g - - - ML 180 179 3 182 3 1 1 16 35 -8.033 -0.020 -6.687 -0.387 0.017 0.564 -0.425 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 36 - U - - - ML 183 182 3 185 3 1 1 15 33 -8.033 -0.020 -6.687 -0.171 -0.946 -1.359 1.139 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 37 - G - - - ML 186 185 3 188 3 1 1 13 31 -8.033 -0.020 -6.687 -1.727 -2.970 1.755 -2.357 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 38 - u - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -0.412 -0.938 0.143 0.698 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB10Cs1H2 ACC RF01523 DESC Trypanosomatid snoRNA TB10Cs1H2 LENG 63 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:26:13 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 5 EFFN 3.100586 CKSUM 3591376794 STATS LOCAL MSV -8.3190 0.71923 STATS LOCAL VITERBI -8.6874 0.71923 STATS LOCAL FORWARD -3.3509 0.71923 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.59070 1.33190 1.14526 1.54131 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 0.00000 * 1 0.10825 3.57395 3.26655 3.31269 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 2 2.80420 3.57416 0.12604 3.51243 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 3 3.54860 0.16911 3.36186 2.38438 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 4 1.01229 2.65427 0.72243 2.51707 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 5 3.54614 0.16929 3.36058 2.38392 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 6 3.34451 2.20832 3.14952 0.20830 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 7 3.52840 0.17065 3.35130 2.38061 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 8 0.22814 3.19254 2.13680 3.10366 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 9 3.22750 1.74752 3.06084 0.30206 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.35103 1.27834 4.04322 0.12153 2.16775 1.09861 0.40547 10 2.92846 2.83939 3.45677 0.15487 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 11 2.92846 2.83939 3.45677 0.15487 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 12 3.24996 0.13552 3.82002 2.71754 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 13 0.10825 3.57395 3.26655 3.31269 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 14 0.10825 3.57395 3.26655 3.31269 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 15 2.08054 3.23205 0.23645 3.07395 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 16 3.54879 0.16909 3.36196 2.38442 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 17 2.91988 0.64261 2.71317 1.03898 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 18 1.62654 2.69090 0.42027 2.54213 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 19 2.92416 0.49138 2.71209 1.31636 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 20 1.26456 1.68371 0.94041 1.95557 21 g - - < 1.38629 1.38629 1.38629 1.38629 0.35103 1.27834 4.04322 0.73738 0.65079 1.09861 0.40547 21 3.24996 0.13552 3.82002 2.71754 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 22 2.80354 3.57326 0.12615 3.51120 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 23 1.01233 2.65372 0.72261 2.51633 26 g - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 24 2.80217 3.57142 0.12639 3.50870 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 25 3.54159 0.16964 3.35821 2.38308 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 26 0.87757 1.16870 1.80995 2.20931 29 a - - < 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 27 1.56997 2.21210 2.51949 0.50754 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 28 0.72655 2.60793 1.09653 2.21907 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 29 0.85916 1.59442 2.20222 1.33598 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 30 1.32990 2.06836 1.31662 1.07569 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 31 1.82495 0.99266 1.21281 1.76711 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 32 1.81322 1.32771 0.88068 1.84967 35 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 33 1.56997 2.21210 2.51949 0.50754 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 34 3.03595 3.95540 0.10156 3.52690 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 35 1.79937 2.16937 1.23428 0.84559 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 36 2.43785 2.08044 2.08233 0.41077 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 37 2.65991 3.52043 0.14658 3.30210 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 38 3.67670 0.15215 3.40640 2.49282 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 39 2.74218 0.81823 2.45951 0.89433 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 40 3.64695 0.15415 3.39209 2.48711 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.35103 1.27834 4.04322 0.12153 2.16775 1.09861 0.40547 41 2.18815 1.05047 1.89493 0.94734 45 u - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 42 2.09752 2.87433 0.28430 2.68464 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 43 2.78724 0.58592 2.50122 1.20455 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 44 2.09839 2.87595 0.28420 2.68281 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 45 2.66908 3.53435 0.14470 3.31802 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 46 3.29157 2.18373 3.03015 0.22080 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 47 3.24996 0.13552 3.82002 2.71754 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 48 3.03595 3.95540 0.10156 3.52690 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 49 3.03595 3.95540 0.10156 3.52690 53 G - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 50 2.32278 3.24462 0.20874 2.96796 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 51 3.32935 2.47080 3.00426 0.18622 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 52 2.66535 3.52868 0.14546 3.31153 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 53 0.23324 3.35735 2.04766 3.11967 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 54 2.12895 0.84201 2.70554 0.95878 58 c - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 55 2.66532 3.52864 0.14547 3.31148 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 56 2.75511 0.81642 2.46453 0.89321 60 c - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 57 2.66905 3.53430 0.14471 3.31796 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 58 3.72210 0.14922 3.42780 2.50127 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 59 1.52739 2.91236 0.43328 2.52360 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 60 0.10825 3.57395 3.26655 3.31269 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 61 3.03595 3.95540 0.10156 3.52690 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 62 0.10825 3.57395 3.26655 3.31269 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 63 1.82495 0.99266 1.21281 1.76711 67 c - - : 1.38629 1.38629 1.38629 1.38629 0.01802 4.02553 * 1.46634 0.26236 0.00000 * //