INFERNAL1/a [1.1.4 | Dec 2020] NAME rli36 ACC RF01467 DESC Listeria sRNA rli36 STATES 261 NODES 67 CLEN 84 W 101 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:20:35 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 1.174805 CKSUM 2028549435 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 52.00 NC 40.20 EFP7GF -6.9462 0.71878 ECMLC 0.59940 -8.58535 1.51132 1600000 509900 0.002353 ECMGC 0.43027 -13.41270 -1.37532 1600000 71023 0.005632 ECMLI 0.50842 -7.87160 3.43415 1600000 376288 0.003189 ECMGI 0.43818 -8.68801 2.32266 1600000 49816 0.008030 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 101 122 -6.600 -6.807 -0.068 -5.221 IL 1 1 2 1 4 4 37 105 126 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 36 104 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 5 35 101 122 -7.644 -0.026 -6.298 -0.115 -0.710 -1.083 0.995 D 4 2 3 5 3 1 32 100 120 -6.174 -1.687 -0.566 IL 5 5 3 5 3 4 35 103 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 4 34 100 121 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 7 5 3 8 3 1 32 99 119 -6.174 -1.687 -0.566 IL 8 8 3 8 3 3 35 102 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 3 33 99 120 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 10 8 3 11 3 1 31 98 118 -6.174 -1.687 -0.566 IL 11 11 3 11 3 3 34 101 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 2 32 98 119 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 13 11 3 14 3 0 31 97 117 -6.174 -1.687 -0.566 IL 14 14 3 14 3 2 33 100 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 2 1 31 97 118 -7.963 -0.006 -0.922 -1.024 -1.619 1.409 D 16 14 3 17 2 0 30 96 117 -8.445 -0.004 IL 17 17 3 17 2 1 32 98 119 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 6 ] - - - - - - B 18 17 3 19 144 0 30 96 117 [ BEGL 7 ] - - - - - - S 19 18 1 20 4 0 1 57 76 -0.050 -6.668 -6.076 -6.716 [ MATP 8 ] 6 46 a u - - MP 20 19 1 24 6 2 4 57 76 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.328 -2.489 -3.373 2.906 -3.483 -4.518 0.792 -3.438 -3.290 1.589 -3.813 -0.052 0.369 -3.781 -1.154 -2.240 ML 21 19 1 24 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 22 19 1 24 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 23 19 1 24 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 24 24 5 24 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 25 25 6 25 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 45 g u - - MP 26 25 6 30 6 2 4 55 74 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.240 -2.183 -3.370 1.333 -3.776 -4.531 0.539 -3.452 -3.151 1.858 -3.656 2.530 0.176 -3.799 -1.398 -2.164 ML 27 25 6 30 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 6 30 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 6 30 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 44 u a - - MP 32 31 6 36 6 2 4 53 72 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 33 31 6 36 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 43 a u - - MP 38 37 6 42 6 2 3 51 70 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.328 -2.489 -3.373 2.906 -3.483 -4.518 0.792 -3.438 -3.290 1.589 -3.813 -0.052 0.369 -3.781 -1.154 -2.240 ML 39 37 6 42 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 41 37 6 42 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 42 42 5 42 6 1 1 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 43 43 6 43 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 42 G C - - MP 44 43 6 48 4 2 2 49 68 -6.600 -6.807 -0.068 -5.221 -4.125 -2.805 -4.187 0.593 -4.364 -4.436 0.126 -4.370 -3.896 3.446 -4.281 -0.490 -0.281 -4.056 -1.883 -3.074 ML 45 43 6 48 4 1 1 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 46 43 6 48 4 1 1 48 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 47 43 6 48 4 0 0 47 67 -4.568 -4.250 -2.265 -0.520 IL 48 48 5 48 4 1 1 50 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 49 49 6 49 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - U - - - ML 50 49 6 52 3 1 1 46 65 -8.058 -0.023 -6.376 -0.922 -1.024 -1.619 1.409 D 51 49 6 52 3 0 0 45 64 -5.620 -0.734 -1.403 IL 52 52 3 52 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 41 - U - - MR 53 52 3 55 5 1 1 45 64 -6.818 -0.047 -6.634 -6.846 -7.737 -0.922 -1.024 -1.619 1.409 D 54 52 3 55 5 0 0 44 63 -5.352 -0.707 -2.978 -4.409 -2.404 IR 55 55 3 55 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 40 u a - - MP 56 55 3 60 6 2 2 44 63 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 57 55 3 60 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 3 60 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 3 60 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 43 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 39 a u - - MP 62 61 6 66 6 2 2 42 61 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.328 -2.489 -3.373 2.906 -3.483 -4.518 0.792 -3.438 -3.290 1.589 -3.813 -0.052 0.369 -3.781 -1.154 -2.240 ML 63 61 6 66 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 6 66 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 1 41 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 38 u a - - MP 68 67 6 72 6 2 2 40 59 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 69 67 6 72 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 37 u a - - MP 74 73 6 78 4 2 2 38 57 -6.600 -6.807 -0.068 -5.221 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 75 73 6 78 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 77 73 6 78 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 78 78 5 78 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 79 79 6 79 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - U - - - ML 80 79 6 82 3 1 1 35 54 -7.644 -0.026 -6.298 -0.922 -1.024 -1.619 1.409 D 81 79 6 82 3 0 0 34 53 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - C - - - ML 83 82 3 85 3 1 1 34 53 -8.058 -0.023 -6.376 -1.005 1.345 -1.791 -0.573 D 84 82 3 85 3 0 0 33 52 -5.620 -0.734 -1.403 IL 85 85 3 85 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 36 - G - - MR 86 85 3 88 3 1 1 33 52 -8.058 -0.023 -6.376 -0.904 -2.003 1.503 -1.388 D 87 85 3 88 3 0 0 32 51 -6.390 -1.568 -0.620 IR 88 88 3 88 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 35 - A - - MR 89 88 3 91 5 1 1 32 51 -6.818 -0.047 -6.634 -6.846 -7.737 1.538 -1.742 -1.436 -1.229 D 90 88 3 91 5 0 0 31 50 -5.352 -0.707 -2.978 -4.409 -2.404 IR 91 91 3 91 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 34 c g - - MP 92 91 3 96 6 2 2 31 50 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.180 -3.121 -3.124 0.454 -2.261 -3.744 1.992 -2.916 -3.157 0.757 -3.575 -1.202 1.965 -3.353 1.739 -2.085 ML 93 91 3 96 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 3 96 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 3 96 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 33 u a - - MP 98 97 6 102 6 2 2 29 48 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 99 97 6 102 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 101 97 6 102 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 32 u a - - MP 104 103 6 108 6 2 2 27 46 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -2.938 -2.825 -3.004 0.652 -2.498 -3.768 1.648 -3.008 -3.033 0.998 -3.526 -0.901 2.630 -3.176 -0.285 -0.602 ML 105 103 6 108 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 6 108 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 108 108 5 108 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 31 a u - - MP 110 109 6 114 6 2 2 25 44 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.328 -2.489 -3.373 2.906 -3.483 -4.518 0.792 -3.438 -3.290 1.589 -3.813 -0.052 0.369 -3.781 -1.154 -2.240 ML 111 109 6 114 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 6 114 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 30 u a - - MP 116 115 6 120 4 2 2 23 42 -6.600 -6.807 -0.068 -5.221 -2.552 -2.508 -2.663 0.813 -2.339 -3.446 1.608 -2.796 -2.714 1.195 -3.229 -0.731 2.454 -1.064 -0.231 -1.747 ML 117 115 6 120 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 119 115 6 120 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 120 120 5 120 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 121 121 6 121 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 23 - A - - - ML 122 121 6 124 3 1 1 20 39 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 123 121 6 124 3 0 0 19 38 -6.174 -1.687 -0.566 IL 124 124 3 124 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 24 - A - - - ML 125 124 3 127 3 1 1 19 38 -7.644 -0.026 -6.298 1.136 -1.232 -0.411 -0.678 D 126 124 3 127 3 0 0 18 37 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 25 - C - - - ML 128 127 3 130 3 1 1 18 36 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 129 127 3 130 3 0 0 17 36 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - u - - - ML 131 130 3 133 3 1 1 16 35 -7.644 -0.026 -6.298 -0.238 -0.717 -0.102 0.689 D 132 130 3 133 3 0 0 16 34 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - c - - - ML 134 133 3 136 3 1 1 15 34 -7.644 -0.026 -6.298 -0.490 0.584 -1.247 0.451 D 135 133 3 136 3 0 0 15 33 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - U - - - ML 137 136 3 139 3 1 1 13 32 -7.644 -0.026 -6.298 -0.922 -1.024 -1.619 1.409 D 138 136 3 139 3 0 0 13 32 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - C - - - ML 140 139 3 142 2 1 1 1 1 * 0.000 -1.005 1.345 -1.791 -0.573 D 141 139 3 142 2 0 0 0 0 * 0.000 IL 142 142 3 142 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 143 142 3 -1 0 0 0 0 0 [ BEGR 36 ] - - - - - - S 144 18 1 145 3 0 1 54 73 -7.644 -0.026 -6.298 IL 145 145 2 145 3 1 1 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 47 - C - - - ML 146 145 2 148 3 1 2 54 73 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 147 145 2 148 3 0 0 52 72 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 48 - A - - - ML 149 148 3 151 3 1 2 53 72 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 150 148 3 151 3 0 0 51 71 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 49 - U - - - ML 152 151 3 154 3 1 1 52 71 -7.644 -0.026 -6.298 -0.922 -1.024 -1.619 1.409 D 153 151 3 154 3 0 0 50 70 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 50 - U - - - ML 155 154 3 157 3 1 1 50 70 -7.644 -0.026 -6.298 -0.922 -1.024 -1.619 1.409 D 156 154 3 157 3 0 0 49 69 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - C - - - ML 158 157 3 160 3 1 1 49 69 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 159 157 3 160 3 0 0 48 68 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - C - - - ML 161 160 3 163 3 1 1 48 68 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 162 160 3 163 3 0 0 47 67 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - C - - - ML 164 163 3 166 3 1 1 47 67 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 165 163 3 166 3 0 0 46 65 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - A - - - ML 167 166 3 169 3 1 1 46 66 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 168 166 3 169 3 0 0 45 64 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - C - - - ML 170 169 3 172 3 1 1 45 64 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 171 169 3 172 3 0 0 44 63 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - a - - - ML 173 172 3 175 3 1 1 44 63 -7.644 -0.026 -6.298 0.749 -0.784 -0.889 0.262 D 174 172 3 175 3 0 0 43 62 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - U - - - ML 176 175 3 178 3 1 1 43 62 -7.644 -0.026 -6.298 -0.922 -1.024 -1.619 1.409 D 177 175 3 178 3 0 0 42 61 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - c - - - ML 179 178 3 181 5 1 1 42 61 -6.818 -0.047 -6.634 -6.846 -7.737 -0.025 0.452 -1.017 0.207 D 180 178 3 181 5 0 0 41 60 -4.959 -0.803 -4.221 -2.596 -2.508 IL 181 181 3 181 5 1 1 42 61 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 59 84 G C - - MP 182 181 3 186 6 2 2 41 60 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -4.125 -2.805 -4.187 0.593 -4.364 -4.436 0.126 -4.370 -3.896 3.446 -4.281 -0.490 -0.281 -4.056 -1.883 -3.074 ML 183 181 3 186 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 184 181 3 186 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 185 181 3 186 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 186 186 5 186 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 187 187 6 187 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 60 83 C G - - MP 188 187 6 192 6 2 2 39 58 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.937 -3.776 -3.723 -0.075 -2.594 -4.213 3.302 -3.339 -3.759 0.280 -4.079 -1.717 0.972 -4.042 -0.293 -2.622 ML 189 187 6 192 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 190 187 6 192 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 191 187 6 192 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 192 192 5 192 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 193 193 6 193 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 61 82 u a - - MP 194 193 6 198 6 2 2 37 56 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 195 193 6 198 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 6 198 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 6 198 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 62 81 u a - - MP 200 199 6 204 4 2 2 35 54 -6.600 -6.807 -0.068 -5.221 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 201 199 6 204 4 1 1 35 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 203 199 6 204 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 204 204 5 204 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 205 205 6 205 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 63 - C - - - ML 206 205 6 208 3 1 1 32 51 -8.058 -0.023 -6.376 -1.005 1.345 -1.791 -0.573 D 207 205 6 208 3 0 0 31 50 -5.620 -0.734 -1.403 IL 208 208 3 208 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 54 ] - 80 - A - - MR 209 208 3 211 5 1 1 31 50 -6.818 -0.047 -6.634 -6.846 -7.737 1.538 -1.742 -1.436 -1.229 D 210 208 3 211 5 0 0 30 49 -5.352 -0.707 -2.978 -4.409 -2.404 IR 211 211 3 211 5 1 1 32 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 64 79 u a - - MP 212 211 3 216 6 2 2 30 49 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 213 211 3 216 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 214 211 3 216 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 215 211 3 216 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 216 216 5 216 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 217 217 6 217 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 65 78 G C - - MP 218 217 6 222 6 2 2 28 47 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -4.125 -2.805 -4.187 0.593 -4.364 -4.436 0.126 -4.370 -3.896 3.446 -4.281 -0.490 -0.281 -4.056 -1.883 -3.074 ML 219 217 6 222 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 220 217 6 222 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 221 217 6 222 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 222 222 5 222 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 223 223 6 223 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 66 77 a u - - MP 224 223 6 228 6 2 2 26 45 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.328 -2.489 -3.373 2.906 -3.483 -4.518 0.792 -3.438 -3.290 1.589 -3.813 -0.052 0.369 -3.781 -1.154 -2.240 ML 225 223 6 228 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 226 223 6 228 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 227 223 6 228 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 228 228 5 228 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 229 229 6 229 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 67 76 u a - - MP 230 229 6 234 6 2 2 24 43 -8.984 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.393 -3.499 0.262 -2.580 -4.114 1.731 -3.229 -3.513 0.634 -3.912 -1.306 2.941 -3.769 -0.271 -2.387 ML 231 229 6 234 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 232 229 6 234 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 233 229 6 234 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 234 234 5 234 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 235 235 6 235 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 68 75 u g - - MP 236 235 6 240 4 2 2 22 41 -6.600 -6.807 -0.068 -5.221 -3.487 -3.375 -3.323 0.227 -2.290 -3.852 1.976 -2.996 -3.359 0.536 -3.715 -1.393 1.224 -3.624 2.480 -2.262 ML 237 235 6 240 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 238 235 6 240 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 239 235 6 240 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 240 240 5 240 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 241 241 6 241 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 69 - C - - - ML 242 241 6 244 3 1 1 19 38 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 243 241 6 244 3 0 0 18 37 -6.174 -1.687 -0.566 IL 244 244 3 244 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 70 - C - - - ML 245 244 3 247 3 1 1 18 36 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 246 244 3 247 3 0 0 17 36 -6.174 -1.687 -0.566 IL 247 247 3 247 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 71 - C - - - ML 248 247 3 250 3 1 1 16 35 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 249 247 3 250 3 0 0 16 34 -6.174 -1.687 -0.566 IL 250 250 3 250 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 72 - A - - - ML 251 250 3 253 3 1 1 15 34 -7.644 -0.026 -6.298 1.538 -1.742 -1.436 -1.229 D 252 250 3 253 3 0 0 15 33 -6.174 -1.687 -0.566 IL 253 253 3 253 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 73 - C - - - ML 254 253 3 256 3 1 1 13 32 -7.644 -0.026 -6.298 -1.005 1.345 -1.791 -0.573 D 255 253 3 256 3 0 0 13 32 -6.174 -1.687 -0.566 IL 256 256 3 256 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 74 - A - - - ML 257 256 3 259 2 1 1 1 1 * 0.000 1.538 -1.742 -1.436 -1.229 D 258 256 3 259 2 0 0 0 0 * 0.000 IL 259 259 3 259 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 260 259 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME rli36 ACC RF01467 DESC Listeria sRNA rli36 LENG 84 MAXL 178 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:20:35 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 6 EFFN 1.813477 CKSUM 2028549435 STATS LOCAL MSV -8.4837 0.71878 STATS LOCAL VITERBI -9.6630 0.71878 STATS LOCAL FORWARD -3.3039 0.71878 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26139 1.39619 1.74545 1.22202 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 0.00000 * 1 1.54807 2.00384 2.29952 0.59381 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 2 0.20878 2.96763 2.71879 2.64442 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 3 0.20878 2.96763 2.71879 2.64442 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 4 0.20878 2.96763 2.71879 2.64442 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 5 2.35907 2.36664 2.86458 0.28145 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 6 0.47104 2.46099 1.60874 2.40619 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 7 1.80647 2.62168 0.38267 2.51271 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 8 2.68770 1.69721 2.40129 0.41830 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 9 0.47183 2.45897 1.60858 2.40301 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 10 2.41320 2.95668 0.21871 2.90176 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 11 2.35907 2.36664 2.86458 0.28145 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 12 2.68166 1.69714 2.39900 0.41926 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 13 0.47208 2.45831 1.60853 2.40198 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 14 2.68526 1.69718 2.40037 0.41868 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 15 2.68525 1.69718 2.40037 0.41868 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 16 2.35907 2.36664 2.86458 0.28145 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 17 2.51818 0.28162 3.08664 2.12715 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 18 2.40685 1.39534 2.16225 0.60315 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 19 2.68438 1.69717 2.40003 0.41882 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 20 2.25958 1.65010 1.99351 0.56677 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 21 0.47198 2.45859 1.60856 2.40241 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 22 2.04749 1.57876 1.78778 0.69840 22 u - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 23 0.20878 2.96763 2.71879 2.64442 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 24 0.51216 2.41793 1.70045 2.04721 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 25 2.51818 0.28162 3.08664 2.12715 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 26 1.64933 1.98118 1.43707 0.83866 26 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 27 1.88399 0.87333 2.43177 1.07125 27 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 28 2.35907 2.36664 2.86458 0.28145 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 29 2.51818 0.28162 3.08664 2.12715 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 30 0.86335 1.74889 1.40045 1.84642 30 a - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 31 2.63400 1.87221 2.27372 0.39824 31 U - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 32 0.70790 2.16436 1.47884 1.80427 32 a - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 33 0.47575 2.58079 1.53393 2.43976 33 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 34 1.25483 2.32709 0.68372 2.18425 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 35 0.20878 2.96763 2.71879 2.64442 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 36 2.41555 3.25074 0.20746 2.82531 36 G - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 37 0.47612 2.57962 1.53392 2.43818 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 38 0.47595 2.58014 1.53393 2.43889 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 39 2.63672 1.87240 2.27460 0.39778 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 40 0.47549 2.58162 1.53394 2.44088 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 41 2.35907 2.36664 2.86458 0.28145 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 42 3.11362 0.25689 2.78631 2.11644 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 43 2.63131 1.87202 2.27285 0.39871 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 44 0.47663 2.57801 1.53391 2.43602 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 45 2.72189 1.68231 2.42219 0.41615 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 46 2.62273 1.87141 2.27007 0.40020 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 47 2.51818 0.28162 3.08664 2.12715 47 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 48 0.20878 2.96763 2.71879 2.64442 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 49 2.35907 2.36664 2.86458 0.28145 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 50 2.35907 2.36664 2.86458 0.28145 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 51 2.51818 0.28162 3.08664 2.12715 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 52 2.51818 0.28162 3.08664 2.12715 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 53 2.51818 0.28162 3.08664 2.12715 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 54 0.20878 2.96763 2.71879 2.64442 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 55 2.51818 0.28162 3.08664 2.12715 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 56 0.81450 2.01602 2.10426 1.19726 56 a - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 57 2.35907 2.36664 2.86458 0.28145 57 U - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 58 1.45424 0.97424 2.21517 1.27365 58 c - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 59 2.41354 2.95704 0.21862 2.90227 59 G - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 60 2.92788 0.31678 2.66588 1.90746 60 C - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 61 2.68581 1.69719 2.40058 0.41860 61 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 62 2.68530 1.69718 2.40038 0.41868 62 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 63 2.51818 0.28162 3.08664 2.12715 63 C - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 64 2.68173 1.69714 2.39903 0.41925 64 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 65 2.41252 2.95598 0.21890 2.90075 65 G - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 66 0.47197 2.45860 1.60856 2.40243 66 A - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 67 2.68527 1.69718 2.40037 0.41868 67 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 68 2.69160 1.45117 2.44684 0.49206 68 U - - < 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 69 2.51818 0.28162 3.08664 2.12715 69 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 70 2.51818 0.28162 3.08664 2.12715 70 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 71 2.51818 0.28162 3.08664 2.12715 71 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 72 0.20878 2.96763 2.71879 2.64442 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 73 2.51818 0.28162 3.08664 2.12715 73 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 74 0.20878 2.96763 2.71879 2.64442 74 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 75 1.95731 2.61985 0.35829 2.44094 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 76 0.47612 2.57962 1.53392 2.43819 76 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 77 2.63523 1.87230 2.27412 0.39803 77 U - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 78 3.12300 0.25577 2.79012 2.11826 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 79 0.47549 2.58163 1.53394 2.44090 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 80 0.20878 2.96763 2.71879 2.64442 80 A - - - 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 81 0.47648 2.57848 1.53391 2.43665 81 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 82 0.47656 2.57823 1.53391 2.43631 82 A - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 83 2.18004 2.82976 0.27522 2.68047 83 G - - > 1.38629 1.38629 1.38629 1.38629 0.04850 3.74347 3.74347 1.46634 0.26236 1.09861 0.40547 84 3.10265 0.25822 2.78182 2.11431 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.02454 3.71951 * 1.46634 0.26236 0.00000 * //