# STOCKHOLM 1.0
#=GF ID snoR134
#=GF AC RF01430
#=GF DE small nucleolar RNA snoR134
#=GF AU Osuch I
#=GF GA 40.0
#=GF NC 39.7
#=GF TC 40.3
#=GF SE INFERNAL
#=GF SS Predicted; RNAalifold; Osuch I
#=GF TP Gene; snRNA; snoRNA; HACA-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 26.87 -Z 2958934 CM SEQDB
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF DR SO; 0000594; H_ACA_box_snoRNA;
#=GF RN [1]
#=GF RM 19357091
#=GF RT Mining small RNA sequencing data: a new approach to identify small
#=GF RT nucleolar RNAs in Arabidopsis.
#=GF RA Chen HM, Wu SH
#=GF RL Nucleic Acids Res. 2009;37:e69.
#=GF WK Small_nucleolar_RNA
#=GF SQ 5

DQ108711.1/84-227        UCGCAGGA-GC-C--UCCCGGGCUAGUCUGAUAACUAAGGUACUUGAGGAACUAAGCCCCAAAGCUCCUGCUAGAUUAUUUUUGCCGUUU-GUGUUGCAGAUUUGCCUUAU------UCCUUAGGCUUU-UCUGUGUCAAAAAAGCGGCUAUAUCU
AARH01005974.1/108-255   CUGCACGAUGC-C--UCCCAGGCUUCGCUGAUUACAAA--CCCCUGAGGUAGAAAGUCCCAAAGCUCGUGCUAAAGCAUC--UGCCGUUUAGUGUUGCAGUUUAGCCUUUUGUACCUUUCCACGGCUUU-UCUGUGUCAAAUCAACGGCUACAUCU
AC151806.21/724-586      ACGCACGUUGCAA--CCCCGGGCUUCUCUGAAAUUUAA-----AGGAAGU-GAAAGCCCCAUUGCACGUGCUAAAUUGAU---GCCAUUC-GUGUUGCAGU-UCAUCUCGU---UAAUUCCACGAUUGA-UCUGUGUCAAAGUAAUGGCUACAUCG
AP003829.2/18223-18074   AUGCACGGUGC-UAACCCCGGGCUUGUCGGAUUGGAAU--CCUCUGAAGAAUGAAGCCCCAAUGCCUGUGCUAGAUCCACCAUGCCAUUCAGUGUUGCAGG---UCAUGAUGCUUCGAGCUCGUGAUUGGUCUGUGUCAGCGUAAUGGAUACAUUU
AAAA02020760.1/6696-6547 UUGCACGGUGC-UAACCCCGGGCUUGUCGGAUUCAAAU--CGCCUGAAGAAGGAAGCCCCAAUGCCUGUGCUAGAUCCACAAUACCAUUCAGUGUUGCAGG---UCUUGAUGCUUCGAGCAUGUGAUUGAUCUGUGUCAGCGUAAUGGAUACAUUU
#=GC SS_cons             ::<<<<<<-<<.-..----<<<<<<<<<<_________.._______>>>->>->>>>>---->>>>>>>>::::::::::::<<<<<<<--<<-<<<<<<.--<<<________________>>>---.>>>>>>->>--->>>>>>>:::::::
#=GC RF                  uuGCAcGgUGC.u..cCCCGGGCUucuCcGAUuauaAa..caccuGAgGaAgaAAGCCCCAAuGCcCgUGCUAgAuuaauuaUgCCguUcAGUGUugCAGg.UugccUuaUGcuucauuCuuaggcUuu.cCUGugUCAaaggAacGGcUAcAUcu
//
