# STOCKHOLM 1.0
#=GF ID IsrR
#=GF AC RF01419
#=GF DE Antisense RNA which regulates isiA expression
#=GF AU Osuch I
#=GF GA 52.0
#=GF NC 51.9
#=GF TC 52.1
#=GF PI lsrR
#=GF SE Predicted; MAFFT
#=GF SS Predicted; PFOLD; Osuch I
#=GF TP Gene; antisense;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 26.89 -Z 2958934 CM SEQDB
#=GF DR SO; 0001263; ncRNA_gene;
#=GF RN [1]
#=GF RM 16636284
#=GF RT An internal antisense RNA regulates expression of the photosynthesis gene
#=GF RT isiA.
#=GF RA Duhring U, Axmann IM, Hess WR, Wilde A
#=GF RL Proc Natl Acad Sci U S A. 2006;103:7054-7058.
#=GF WK Iron_stress_repressed_RNA
#=GF ** seedtax: Eukaryota; Bacteria; unclassified sequences
#=GF SQ 308

AM423539.2/7314-7144         AAUAACCAA-AUUUAAGA-CUUGGGGUAAACG---UCAAAUUAGUWAGUUAAUUUUCUUA----------UAUUAC----CC-CU----U-UG------GAACCCU---GG-------------U--------------------------C--AAUA----------AAUAAUAUCAAAUACUAA-AA-GAAA-AGAAU
X97043.1/910-733             CGUACUCAA-ACAGGACG-GACAGGAUGGUGGCACCGGGGUU----GGUAACCACGCGCA----------CUUCAC-----------------------CAAUGGU---GG-------------AG---------UCGUAGACCCCA-UGGA--ACCG----------CAGCCA---GAUGACAAA-CA-GCAG-GGCUG
AARH01011413.1/13675-13504   GGU-----A-AUUUGAUG-GAGAGAGAAAAAG---UAGUUUG----GUUGCUAUUGCUCU----------CAGCUU----CU-UU----U-AG------CCACUUU---UG-------------UU---------UCUUAA----------A--AGUA----------UAGAGCUUUGAAUAAUUG-AA-GAAA-AGCAC
AM430133.2/11786-11596       AAUAAGCAA-AUGUGACA-CUUGAGCUAAGUU---CCAAGUU----GAUAAUUUUUCRUUUUCUU-----ACCUUUC--AUA-UC----U-UG------AAGUACA---GU-------------UG---------UCAAAUACACCU--CUG--AAUA----------AAGAACCACAAAUACUAGAGA-AACR-AACAC
CP000239.1/2624256-2624432   UAUGCCCAACAGGUGGCC-AAAGGGGUUCCAG---UUGG--G----AGACACCAGGCGCA----------CCUCUC-----------------------CUGCCAC---CG-------------GG---------UCGAACAAGCCG-CCAA--ACAC----------CACUGCCUUGAGCACCAA-AA-GCCA-GGCUC
X97043.1/2155-1978           CAUACUCAA-AAAUAACG-GAGAGAAUGGUGGCACCGGGGUU----AGAGACAAUGCGCA----------CAUCGC-----------------------CGAUGGU---GG-------------AA---------UCGUAAACGCCG-UGGA--AGCG----------AAUCCA---ACCGACGAA-GA-AGAU-UGCCC
BA000045.2/2489488-2489287   CGUAGCCGA-AGAUGACC-GUCGGGUCGAGGG---UCGGAUU----GGUGACGGUGCGCA----------CCUGGCCGGCCC-AC----U-GG------UUGUUGU---UGUCGAAGAACCAGGGG---------UCGUAGAUGCCG-CCAA--ACCA----------GCAGGCCUUGGCCACCAG-CA-GGAA-GCAAC
AM444593.1/967-773           AAUAACCAA-AUAUAACWACUUGGGCUAAGGG---UCAAGUU----GGUUAAUUUUCUUA----------CAUCYUC--CCCSUC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACGCCGACCAA--AWUA----------AAGAGCCUUGAAUACUA--GA-AGAA-AGCAC
AJ534947.1/502-328           CAUAGCCGA-AGAUAUCA-GCCGGGUUUAGGU---UGGG-------AGAUACGGUGUGCA----------CGGUAC-----------------------CCAGGGA---GG-------------CA---------UCAUACACGCCA-CCCC--AGAA----------CAUGGCCUUAGCCACAAA-UG-CUAA-GCAAA
AY835431.1/93748-93575       AUUUGUUGU-AAAUUAUU-ACUAACUUACGGG---GGCCUUU------------GACGAU----------CGACCC--------C----C-AA------CGGACCA---CG-------------GG---------UCAAAAAGACCG-CCGA--AAUA----------CAUUGCUUUCCAAACUAA-AA-GCCA-UGCAC
AJ311688.1/541-367           GGUAGCCGU-AGAUCACC-CAGGGAUCGAGGG---UGGGCUG-------CACCAGGCGAA----------CGGUUU-----------------------GCUGGGU---GG-------------CA---------UCGUACAACCCG-CCCC--AGGU----------GGUGGCUUUGGCGACGAG-GA-GCAG-CGCCC
AP004950.1/14873-14693       AAUAACCAA-AUAUAAUA-GUUGGACUAA--G---UCAAAUU----GGUAAUUUUUCUUG----------CAUGUC-----C-CU----U-UG------GAGCCCA---GG-------------UA---------UCACAUAUACCC-CCAA--AAUA----------AAAAGCCUUGAAGACUAG-AA-GAAAAUCCCC
CP000240.1/2372203-2372380   GGUAGGCAA-AGAUCCGC-AGCGGAUUGAGGG---UGGGAUC----CGCAACGAUCCGCA----------CGCGGC-----------------------CCAGGUU---GG-------------CA---------UCGUACAGCCCU-CCCC--AAAA----------GAGAGCCUUGGCCACCAG-CA-GCCA-UGCAC
CP000239.1/2622597-2622774   GGUAGGCAA-AGAUCCGC-AGCGGAUUGAGGG---UGGGAUC----CGUAACUACGCGCA----------CGCGGC-----------------------CCAGUUG---AG-------------CA---------UCGUACAGCCCU-CCCC--AGAA----------GAGCGCUUUGGCCACCAG-CA-ACCA-GGCCC
AJ311687.1/555-378           GAUAGCCAU-AAAUCACA-AAGGGCUUAACAG---UGCCCUC----AGUAACUAGCCGUA----------CAUCAU-----------------------CAAUUCU---GC-------------UC---------CCGUAAAUUCCC-CCCC--AGAA----------CAUGCCUUUUCCCACCAG-CA-AUAA-AGCUC
DQ630521.1/24745-24575       GUUUAC--A-UCAUCUUU-UAAUGAUGGGAGG---CGGGUUG----------AAAAUUUA----------CCUCCU----------------G------GAGCCCA---AG-------------UA---------UCAUAUACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-AA-GCCA-AGCUC
AASG02000597.1/43226-43418   AAUAACUGA-AAAUAACA-AUUGGACUAAAGG---UUAAGUA----G--UAAUUUUCUUA----------CAUCACC--UUC-CC----U-CCACCCCCGAGCCCA---GG-------------UA---------UCAUAUAUGCUC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AY552464.1/3103-2929         UGUAGCCUA-ACAAAGGA-AAAGGAUUGAGAG---UGGGACU-------CACAGUACGUA----------CUUCAC-----------------------CUAAAGU---AG-------------CA---------UCAAAAAUACCA-CCGA--AUAC----------AGUAGCUUUUAACACAAA-CA-AGAA-AGCAC
AJ311691.1/541-367           GAUACCCGU-AAAUCACC-AAUGGGUCAAGCG---UGGGUUG-------CACCAGUCGCA----------CCGUUU-----------------------GAGUCGU---GG-------------CA---------UCAUAGAGGCCG-CCCC--AUGU----------GGUGGCUUUUAGGACUAG-CA-GCAG-CGCGC
AY552464.1/1859-1685         GAUACCCAA-AGAUUGUA-AAUGGGUUAAGAG---UUGGGCU----AGUAACAGUUCUGA----------CCUCGC-----------------------CGAUGAC---AG-------------GG---------UCAUAGAUACCG----A--AGAA----------AACAGCCCAGAGGACUAA-AA-ACAA-GGCAC
AASG02001249.1/17499-17692   AAUAACCGA-AAAUAACA-CUUGGGCUAAGGG---UUAAGUU----AGUAAUUUUUCUUACAUCUCC---CCCCCCC--CCC-CC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AB044481.1/354-187           GUU-----U-AAUUAAGU-UCUCACUUAAUUG---UGGC---------UGAAAAAUUUAC----------CACCGG-----------------------GCGCCCA---AG-------------UA---------UCGUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-UGCAC
AADV02000296.1/863-689       GAUAGCCAA-AAAUGCGG-AUUGGGUCUAAAU---UUGGUUC-------AACAAUACGGA----------CUUCAC-----------------------CCACCAG---AG-------------GA---------UCAUAAAUUCCU-CCCC--AUUG----------GUUGGCUUUGAGGACCAG-AA-GGGC-UGCAC
BA000019.2/4822586-4822763   GGUAGCUAA-AAAUAGUU-GCAAAGUUCCAAG---UCGGAUG----AGAAAUAACUCGCA----------CUUCUC-----------------------CUAAUGU---GG-------------GG---------UCGUAUAAGCCU-CCAA--AAAA----------GACGGCUUUGGCAACGAG-UA-AGCC-UGCUC
M90639.1/768-597             UAAAACUAG-CUUUCACU------------AG---UUGG--A----GGCAAUGUGACUAA----------UUUUCAC--CUC-CA----G---------GAGCCCA---UG-------------UA---------UCAUAGAUUCCU-CCAA--AAUA----------CAUAGCUUUUAAAACUAA-UA-ACCA-AGCAC
CP000393.1/3826703-3826529   GAUAGCCGA-AAAUUCUG-ACAGGAUUUAGGU---UUGGCUG-------UACUAGUCGUA----------CCUUUU-----------------------CUACUAG---UG-------------GA---------UCAUAAAUACCG-CCUA--AAGC----------UGUUGCUUUUAUCACUAA-UA-GUGC-UGCUC
L26530.1/691-514             GAUAACCAU-AAAUAACC-AAAGGAUCUAAUG---UUGGCUG----ACUGACUAGGCGCA----------CCGUUU-----------------------GGGUGGU---GG-------------CG---------UCGUACAAUCCC-CCCC--AAUA----------CAUGGCUUUGCCUGCCAA-CA-GUAG-AGCUC
AB197035.2/120737-120551     AAUGACCGA-AUAUAACA-CCUGGACCCGCUG---UGAGAUU----CGUAAUUUCCCUUA----------CAUCCCC--ACC-AC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUGCACCU-CCGG--AAUA----------CGGAGCUUUGGACACCGA-UA-GAAG-GGCAC
AB158788.1/515-329           UAUAGUUAA-AUAUGAUA-ACAGGAGCUAUUG---UUGGGGA----UGCUACGCGAACUA----------CAUCUCC--ACC-AC----C-AG------CGGCCCA---GG-------------UA---------UCAUAAAUUCCA-CCGA--AGUA----------CAUAGCUUUCGCAACAAG-UA-GAUA-ACAUC
M23639.1/790-613             GAUAACCAU-AAAUGACC-GCUGGAUUAAGCG---UCGGUUG----UGUUACCAAACGGA----------CUGUCU-----------------------GACUGGC---UG-------------CG---------UCGUAUAGGCCA-CCCC--AAGU----------UGUUGCCUUUGCCACCAG-CA-GCAA-UGCUC
AB158787.1/515-329           CAUAAUUAG-CUAUUAUU-AUAGGAUUUAGGG---UCGGUGC----UGUAACUCGAACUA----------CAUCUCC--ACC-UC----C-UG------CAGCCCA---GG-------------UA---------UCGUAAAUACCU-CCGA--AGUA----------AAGGGCCUUAGCAACAAG-UA-AAUA-ACAUC
AY876220.1/511-313           CGUAUCCAA-AAAUAAUA-AAUGGAUUGAUAG---UUGGGUU----AUCGAUAAAUCUAA----------CAUCACC--ACC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAUAAACCA-AAACUAAAUACGUUACCUGGCAUAGCUCUGGCAGCAAA-UA-GUAA-UGCAC
CP000393.1/3829197-3829020   GGUACCCGA-AGAUAGUU-UGUGGAUUCAGAG---UUGGUUC----AGUAAUCACUCGUA----------CAUUGG-----------------------CGAUCGC---CG-------------GA---------UCGUACAAACCA-CUAC--CAUA----------AACGGCUUUGACUACCAG-CA-UCAA-UGCUC
CP000393.1/3828100-3827923   AGUAGCCGA-AAAUGGUU-GUGGGGUUCAAAG---UUGGAUC----GUAAAUUACCCGCA----------CAUUCU-----------------------GAAUGAC---UG-------------GA---------UCGUAUAAUCCA-CCAU--AUGC----------CAUUGCUUUUGCUACAAG-CA-ACAA-AGCAC
AARH01003324.1/43325-43492   AAUAACCAA-AAAUAAUA---------------------CUU----GGUAAUUUUUCUUA----------UAUCUCC--CCC-CC----A---------GAGCCCA---GG-------------UA---------UCAUAUACACCC-CCAA--GAUA----------AAGAGCUCUGAAUACUAG-AA-GAAA-AGCAC
AM778094.1/95027-95203       AAUAACCAA-AUAUAACA-CUUGGGCUAAGAG---UCAAGUU----GGUAAUUUUUGUAA----------CAUCUC---CCC-UC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACAUCU-CCAA--AAUA----------AAGAGUCUUGAAUACUAG-AA-G---------
AY876223.1/499-313           CAUAAUUAG-CUAUUAUU-AUAGGAUUUAGAG---UUGGUUU----UAUAACUUGAACUA----------CAUCUCC--ACC-UC----C-UG------CAGCCCA---GG-------------UA---------UCGUAAAUACCU-CCCA--AAUA----------AAGAGCCUUACCAACAAG-UA-AAUA-ACAUC
BA000039.2/1089797-1089620   GAUAGCCAU-AGAUGACA-AAGGGAUCCAACG---UGGGCUG----GGUUAUCAAGCGUA----------CCGUUU-----------------------GCAAAUU---GG-------------CA---------UCGUACAACCCA-CCCC--AGAU----------GGUUGCUUUGAGAACUAA-CA-GCAG-GGCAC
AASG02002677.1/23030-22834   AAUAACUGA-AAAUAACA-CUUGGGCUAAGGG---UUAAGUU----AGUAAUUUUUCUUACAUCCCCCCCCCCCUCC--UUC-CU----C-UG------GAGACCA---GG-------------UA---------UCAUAUACGCCC-CUAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AACY021133897.1/1-184        ---AGCCGA-AGACCACA-CCCGGAUCGAGAG---UCGGAUU----GGUGAUCAGACGAA----------CAUCGCC--ACC-GC----C-GG------GUGCCCA---GG-------------UG---------UCGUAUACGCCA-CCAA--AGAA----------CAUGGCCUUGAAGACCAG-GA-GCAA-ACAGC
AJ582999.1/527-350           GAUAGCCAU-AGAUAACC-CAAGGAUCGAGGG---UUGGUUC----ACUAACGACUCGGA----------CAGCGC-----------------------CGAUAGU---UG-------------CG---------UCGUAUAAUCCC-CCCC--AGUA----------CAUAGCUUUGGCCACUAA-UA-AUAA-UGCAG
AARH01007846.1/112985-112801 AAUAACCAA-AAAUAACA-CUUUGACUAAGAG---UCAAGUU----GGUAAUUUGUCUUA----------CAUCUC-----C-UC----G-CA------GAGCCCA---UG-------------UA---------UCAUAUACACCA-CCAA--AAUAG---------AAGAGCUUUGAACACUAG-AA-GAAA-AACAU
AACY021136096.1/554-371      GAUAUCCAA-GAAUAAUU-CGAGGGUCUAAUG---UUGGGUU-------GAUUAAUCUAA----------CUUCACC--UCC-AC----C-AG------GUGCCCA---UG-------------UA---------UCAUAAGCACCA-CCUAU-GAAA----------CACCAGUUUACAGACCAA-G--CAAG-UGCUC
AACY021969765.1/456-270      GGUAGCCGA-AGAUCACG-CCCGGGUCGAGGG---UCGGGUU----GGUGAUCAGGCGAA----------CGUCGCC--GCC-GC----C-AG------GGGCCCA---GG-------------UG---------UCGUAGACGCCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GCAGC
AACY021940540.1/50-233       GAUAACCAA-GAAUAAUA-CGAGGGUCUAAUG---UUGGAUU-------UAUAAGUCUAA----------CUUCACC--ACC-AC----C-AG------GGGCCCA---UG-------------UA---------UCAUAAGCUCCA-CCGA--UGAAG---------CACCAGUUUAGAGACCAA-G--CAAG-AGCAC
AJ311684.2/544-367           GAUAGCCAU-AAAUCACG-GCUGGACUCAGGG---UAGGUUC----GGUCACCAGACGCA----------CGGUUU-----------------------GGGUGGC---AG-------------CA---------UCGUAUAAACCG-CCCC--AGUA----------CAUCGCUUUGGCGACUAA-CA-AUAA-GGCUC
CP000110.1/1811437-1811251   GGUAGCCGA-AGAUCACG-CCCGGAUCGAGGG---UCGGGUU----AGUGAUCAUGCGGA----------CGUCACC--GCC-GC----C-GG------GGGCCCA---GG-------------UG---------UCGUAAACGCCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GCAGC
AAVW01000010.1/1904-1727     GAUAGCCAA-AUAUCCGA-CCAGGGUUUAGAG---UUGGUUC----AGUAAUUACCCUUA----------CAUCUG-----------------------CUACAUC---AG-------------GG---------UCAUAAAGACCA-CCCC--AAAA----------CAGUGCUUUCGCCACCAA-UA-ACCA-AGCAC
Z72475.1/571-394             GAUAACCAU-AAAUAACU-GCUGGAUUGAGAG---UUGGGCC----UGUCACCAGGCGGA----------CGGUUC-----------------------CCGUUCC---CG-------------CA---------UCAUACAGUCCA-CCCC--AAUA----------CAUGGCUUUGCCAACUCG-CU-AUAA-GGCCC
L21858.1/896-719             GAUAGCCAU-AGAUAACA-AAGGGGUUGAGGG---UGGGAUG----GUUAACUACUCUGA----------CAACCU-----------------------GAGUUGU---UG-------------CG---------UCGUAUAGUCCU-CCCC--AAAA----------CAUAGCUUUUCCUACCAG-UA-AUAA-AGCUG
M88253.1/955-778             GAUACCCGU-AGAUCACC-GCCGGAUCGAGGG---UCGGCUC----UGUAACCAAGCGCA----------CGGUUU-----------------------GGGUCGC---UG-------------UG---------UCGUACAAACCG-CCAA--AGUA----------CAUCGCUUUCGCUACGAG-CA-AGAA-AGCAC
AACY022673157.1/742-556      GGUAGCCGA-AGAUCACU-CCCGGAUCGAGGG---UCGGGUU----GGUGAUCAUGCGGA----------CAUCACC--GCC-GC----C-GG------GGGCCCA---UG-------------UG---------UCAUACACGCCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GAAG-GCAGC
AACY020889377.1/1-171        GAU------------------UGGGUUUAAUG---UUGGUGU----UGUAAUUAAACGAA----------CAUCACC--ACC-AC----C-AG------GCGCCCA---UG-------------UG---------UCAUAUACACCG-CCUA--AGUA----------CAUUGCUUUUACAACUAA-UA-AAAA-UGAAC
AACY020698291.1/240-423      GAUAUCCAA-AAAUGAUU-CUUGGAUCGAGUG---UUGGGUU-------GAUCAACCUAA----------CUUCUCC--UCC-AC----C-GG------GAGCCCA---AG-------------UG---------UCGUAUGCACCG-CCUA--UGUA----------CAUCCAAUUGAUGGACCA-UA-AAAG-AGCAC
EF625817.1/84496-84311       AAUAACCAA-AUAUAACA-UUUGGGCUAAGAG---UCAAGUU----GGUAAUUUUUCUUA----------UAUCUAC--CCC-UC----C-G-------GAGCCUA---GG-------------UA---------UCAUAUACGACU-CCAA--AUUA----------AAGAGUCUUGAAUAUUAA-AG-GAAA-AACAC
AAVW01000010.1/6331-6154     AGUAGCCAA-AAAUUGUC-AUCGGCUCCAAAU---UGGGAUU----ACUAAUCAGGCGAA----------CAUCAC-----------------------CAAAAUU---CG-------------GG---------UCAUAAACUCCG-CCAA--AAAA----------CAUCGCCUUUAGCACUAA-UA-GAAA-UGCAC
AJ311685.1/544-367           GAUAGCCAU-AAAUGACC-GCUGGAUUCAGGG---UGGGUUC----GGUUACCAGACGCA----------CGGUUU-----------------------GGGUGGC---GG-------------CA---------UCGUAUAAACCG-CCCC--AGUA----------CAUCGCUUUGGCGACUAG-CA-GUAA-GGCUC
BX569690.1/313391-313577     GAUAACCGA-AGAUCACG-CCCGGAUCGAGAG---UCGGGUU----GGUGAUCAUGCGGA----------CGUCACC--GCC-GC----C-GG------GGGCCCA---GG-------------UG---------UCGUAGACGCCA-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GCAGC
CP000239.1/2366571-2366385   GGUAGCCGA-AGAUGACC-GCCGGGUUGAGCG---UGGGGUU----GGUGAUCACCCGCA----------CGUCGCC--ACC-CC----C-CG------GAGCCCA---GG-------------UG---------UCAUAGACGCCA-CCAA--ACCA----------CAUGGCCUUGGCCACCAA-CA-GGAA-AGCCC
CP000553.1/1315546-1315363   GAUAUCCAA-AAAUAAUU-CUUGGAUCGAGUG---UUGGGUU-------GAUCAACCUAA----------CUUCUCC--UCC-AC----C-UG------GAGCCCA---AG-------------UG---------UCGUAUGCACCA-CCUA--UAUA----------CAUCCAGUUAAUGGACCA-UA-GAAG-AGCUC
AACY023917498.1/775-592      GAUAUCCAA-GAAUAAUU-CGUGGGUCUAAAG---UUGGAUU-------AAUUAAUCUAA----------CUUCGCC--ACC-AC----C-AG------GUGCCCA---UG-------------UA---------UCAUAUGCACCG-CCUAU-GAAA----------CACCAGUUUACUGACCAA-G--CAAG-UGCUC
AAVW01000010.1/864-687       GAUAGCCAA-AAAUCACG-GUAGAAUUCCAGG---UAGGGUG----AGAAAUAACUCGCA----------CCUCAC-----------------------CCAAAUU---GG-------------CA---------UCAUACAAGCCG-CCAA--AAAA----------CAUAGACUUGGCAACCAG-UA-AGCC-AGCAC
CP000111.1/1169482-1169299   GAUAACCAA-GAAUAACC-CUUGGAUCUAAUG---UUGGAUU-------GACUAAUCUGA----------CUUCACC--ACC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAAGCACCA-CCAA--UGAA----------ACACCAGUUCACAGUCCA-UG-CUAA-UGCAC
AACY021985367.1/611-797      GGUAGCCGA-AGAUCACU-CCCGGAUCCAGGG---UUGGAUU----GGUGAUCAUGCGGA----------CAUCACC--GCC-AC----C-GG------GUGCCCA---GG-------------UG---------UCAUAGACGCCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GCAGC
AM778094.1/179256-179070     AUUAACUAA-AUAUAACA-UUUGAGCUAAGAG---UCAAGUU----GGUAAUUUUUCUUA----------UAUCUAC--CGC-UU----U-CG------GAGCCCA---GG-------------UA---------UCAUACACACCU-CCAA--AAUA----------AAGAGUCUUGAAUAUUAG-AA-GAAA-AACAC
AADV02000027.1/29055-29232   GAUAGCCAU-AGAUCACU-AAGGGAUCUAAGG---UGGGUUG----GGUUACUAAACGAA----------CCGCCU-----------------------CUGUGGU---GG-------------AA---------UCGUAUAUACCG-CCCC--AGAA----------CAUCGCUUUUCCUACCAA-UA-GUAA-GGCAG
CT971583.1/1514899-1514713   GAUAACCGA-AGAUCACG-CCAGGAUCCAGGG---UGGGAUU----GGUGAUCAGACGCA----------CAUCACC--ACC-GC----C-GG------GGGCCCA---GG-------------UG---------UCGUAGACGCCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GCAGC
AY705210.1/782-592           AAUAACCAA-AUAUCACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUUUGA----------CAUCUCC--CCC-CCACCUU-GG------GUGCCCA---GG-------------UU---------UCAUAUAUGCCU-CCAA--AAUA----------CAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
U38804.1/144840-145026       CAUAGCCAA-AUAUAACU-AAAGGAUUAAGAG---UAGGGUU----GCUCACAAACCUAA----------CAUCGCC--ACC-AC----C-UG------GUGCCCA---UG-------------UA---------UCAUAUACCCCU-CCAA--CAAA----------UAAAGACUUGAUUACUAA-UA-GAAA-UGCUC
AACY022034783.1/357-174      GAUAACCGA-GAAUAAUU-CUUGGAUCUAAGG---UUGGAUU-------AAUUAACCUAA----------CUUCACC--ACC-UC----C-AG------GUGCCCA---AG-------------UA---------UCAUAGGCUCCA-CCGAU-GAAA----------CACCAGUUUAGAGACCA--UG-CUAA-UGCCC
AM778096.1/110672-110487     AAUAACCAA-AUAUAACA-CUUGGGCUAAGAG---UCAAGUU----GGUAAUUUUUGUUA----------CAUCUC---CCC-UU----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAC-AACAC
CP000240.1/887341-887527     AGUAGCCGA-AGAUCACA-GCGGGGUUCAAGG---UGGGGUU----GGUAAUUACCCGCA----------CAUCGCC--ACC-CC----C-UG------GAGCCCA---GG-------------UG---------UCAUAGACACCG-CCAA--ACCA----------CAUGGCCUUGGCCACCAA-UA-GGAA-AGCCC
AACY023613948.1/187-4        GAUAACCAA-GUAUUACU-CUUGGAUCUAGUG---UUGGGUU-------UACAAGUCUGA----------CUUCACC--ACC-AC----C-UG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCA--UG-CUAG-UGCAC
U40144.1/1724-1538           GGUAACCGA-AGAGAACA-CUGGGGCUAAGGG---UGGGGUU----GGUGAUAACCCGAA----------CGCCGCC--GCC-AC----C-AG------GAACCCA---AG-------------GA---------UCAUAGAGUCCA-CCAA--AGAA----------CAUGGCUUUGAAGACAAA-CA-GGCU-UGCGC
AACY023403422.1/907-1089     AAUAACCAA-GAAUAACU-CUUGGAUCCAAAG---UUGGAUU-------AACAAGUCUUA----------CUUCACA--CCU-CC----A-G-------GUGCCCA---UG-------------UG---------UCAUAUGCACCA-CCAAU-AAAA----------CACCAGUUCACUGACCA--UG-CUAA-UGCAC
AACY023525685.1/1017-1203    GAUAGCCGA-AGAUCACA-CCCGGAUCGAGAG---UCGGGUU----AGUGAUCAGACGAA----------CAUCACC--GCC-GC----C-CG------GUGCCCA---GG-------------UG---------UCGUAGACGCCA-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-GA-GCAA-ACAGC
AACY023522437.1/279-96       AAUAUCCAA-GAAUUAUU-CUAGGAUCUAAAG---UUGGAUU-------AAUUAAUCUAA----------CUUCACC--ACC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAAGCUCCA-CCGAU-GAAA----------CACCAGUUUAGAGACCA--UG-CUAA-CGCCC
AACY021330979.1/630-447      AAUAGCCAA-GAAUAACU-CUCGGAUCUAAAG---UUGGAUU-------GACUAGUCUGA----------CUUCACC--ACC-AC----C-AG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCA--UG-CUAG-UGCAC
AACY022982591.1/603-420      AAUAACCAA-GAAUAACU-CUUGGAUCUAAAG---UUGGGUU-------AACAAGUCUGA----------CUUCACC--ACC-GC----C-UG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUAACUGACCA--UG-CUAA-CGCAC
AJ311682.1/544-367           GAUAACCAA-AAAUGGUU-GCAGGAUUUAAAG---UAGGGUC----GGUAACGACACGGA----------CAUCUU-----------------------GGAUGUU---GA-------------CA---------UCGUAAAGUCCA-CCAA--AAAA----------CAUCGCUUUUCCUGCUAA-AA-GCAA-UGCAC
AANO01000002.1/64718-64532   GAUAACCGA-AGAUCACA-CCCGGAUCAAGGG---UGGGGUU----GGUGAUCAGGCGCA----------CGUCGCC--ACC-GC----C-AG------GUGCCCA---GG-------------UG---------UCGUAGACACCG-CCGA--AGAA----------CAUCGCCUUGAACACCAG-CA-GCAG-GCAAC
AACY023852583.1/568-382      GAUAACCGA-AGAUCACA-CCAGGAUCCAAGG---UUGGGUU----GGUGAUCAAACGAA----------CAUCACC--ACC-GC----C-AG------GUGCCCA---GG-------------UG---------UCGUAAACGCCA-CCGA--AGAA----------CAUGGCCUUGAACACCAG-CA-GCAG-GCAGC
AACY020159117.1/712-895      GAUAACCAA-GAAUAACU-CUCGGAUCUAAAG---UUGGGUU-------UACAAGUCUGA----------CUUCACC--ACC-AC----C-UG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUGACUGACCA--UG-CUAA-CGCAC
AY936348.1/4464-4650         AAAAACCAA-AUAUGAUA-CUUGGACUCAGGG---UCAAGUU----CGUAAUUUUUCUUA----------CAUCUC-----------------------CCCCUCC---AG-------------GGGCCCAAGUAUCAUAUACACCC-CCAA--AAUA----------AAGUGCUUUGAAGACUAA-AA-GAAA-AGCAC
AJ296146.1/583-406           AGUAGCUAA-AAAUAGUC-AUUGGAUCAAAAG---UUGGAUU----GGUAAUCAGGCGGA----------CAUUUU-----------------------CUAUAUG---AG-------------UG---------UCAUAUAUUCCG-CCAA--AAAA----------CAUGGCUUUUAGCACCAA-UA-AAAA-UGCAC
AATZ01000001.1/613782-613596 GAUAACCGA-AGAUCACG-CCAGGGUCGAGGG---UGGGGUU----CGUGAUCAAACGAA----------CGUCGCC--ACC-GC----C-GG------GGGCCCA---GG-------------UG---------UCGUAGACGCCG-CCGA--AAAA----------CAUGGCCUUAAAGACCAG-CA-GCAA-GCAGC
AACY022527936.1/460-277      GAUAACCAA-GAAUAACU-CUUGGAUCUAAGG---UUGGGUU-------UACAAGUCUGA----------CUUCACC--ACC-AC----C-AG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-GAAA----------CACCAGUUUACUGACCA--UG-CUAG-UGCAC
AY876218.1/499-313           CAUAGUUAA-AUAUUGCA-CCUGGAUUUAAGG---UUGGAUU----AGGUACAAGACGAA----------CAUCUCC--ACC-GC----C-AG------GUGCCCA---UG-------------UA---------UCGUAUAUACCU-CCAA--AGAA----------CAUCGCCUUGGCUACAAG-UA-AAAA-UGCCC
AANP01000004.1/315982-315796 GAUAACCGA-AGAUCACA-CCGGGAUCGAGGG---UGGGGUU----GGUGAUCAAGCGCA----------CGUCACC--ACC-GC----C-GG------GGGCCCA---GG-------------UG---------UCGUAGACGCCG-CCGA--AGAA----------CAUCGCCUUGAACACCAG-CA-GCAG-CGCAC
AACY021296091.1/647-830      AAUAACCAA-GAAUAACU-CUCGGAUCCAAGG---UUGGGUU-------UACAAGUCUGA----------CUUCACC--ACC-AC----C-UG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCA--UG-CUAG-UGCAC
AACY020164518.1/511-694      AAUAACCAA-GAAUGACU-CUUGGAUCUAGUG---UUGGGUU-------AACAAGUCUGA----------CCUCACC--ACC-AC----C-AG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUAACUGACCA--UG-CUAA-UGCAC
AJ295840.2/571-394           GAUAGCCAA-AGAUGAUA-AAUGGAUUGAGAG---UAGGUUC----AGUAACUACCCGGA----------CGUCAU-----------------------GAAUUGU---GG-------------UG---------UCGUAUAGUCCA-CCCC--AGAA----------CAUCGCUUUUGCUACUAA-CA-ACAA-AGCGC
AB158791.1/515-329           CAUAGUUGA-AGAUAGCA-CCUGGGUUUAGUG---UUGGGUU----UGUUACAACACGAA----------CGUCACC--ACC-AC----C-UG------GUGCCCA---UG-------------UA---------UCGUAAAGACCA-CCAA--GGAA----------CAUCGCUUUAGUUACAAG-AA-GGAA-UGAUC
AAXW01000011.1/95089-94912   GAUAACCGU-AGAUAACU-AAGGGGUCUAAAG---UGGGUUG----AGUCACUAAACGAA----------CCGUUU-----------------------CAGUAGU---GG-------------AG---------UCGUACAACCCA-CCCC--AAUA----------CAUGGCUUUUCCCACUAA-UA-ACAA-UGCAC
CP000393.1/2534646-2534823   GAUAUCCAU-AUAUUACC-AAUGGAUCGAGAG---UGGGAUU----UGUUACUAAACGAA----------CUGUUU-----------------------GAGUUGU---CG-------------CA---------UCAUAAAGCCCA-UCGA--AAUA----------CAUAGCUUUUGCUGCUAA-UA-AUAA-AGCAC
AF239780.1/1566-1380         AAUAACUAA-AAAUAGUA-UUGGGGUUAAGGG---UCAUAUU----UGUUAUUUUUCUUA----------CAUCUCC--ACC-AC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUAUACCU-CCAA--AAUA----------GAGAGCUUUUAGCACGAG-AA-GAAA-AGAAC
AAUA01000001.1/229102-228916 GAUAACCGA-AGAUCACA-CCGGGAUUCAGGG---UGGGGUU----GGUGAUUAGACGAA----------CAUCACC--ACC-AC----C-GG------GGGCCCA---AG-------------UG---------UCGUAGACGCCA-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-UA-GCAG-GCAUC
AACY020552557.1/3347-3530    GAUAACCAA-GAAUAACC-CUUGGAUCUAAAG---UUGGGUU-------AACAAGUCUAA----------CUUCUCC--ACC-AC----C-AG------GAGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUAACUGACCA--UG-CCAA-UGCAC
AY876202.1/499-313           CAUAGCCAA-AAAUAACU-AAUGGAUUAAGAG---UUGGAUU----ACUCACGAAUCUAA----------CAUCACC--GCC-AC----C-UG------GUGCCCA---AG-------------UA---------UCAUAUACUCCA-CCAA--CAAA----------UAGAGCUUUGAUUACUAA-UA-AAAA-UGCUC
AAOK01000004.1/203251-203065 GAUAACCGA-AGAUCACA-CCGGGAUCAAGCG---UUGGGUU----GGUGAUCAGACGUA----------CAUCACC--ACC-GC----C-CG------GAGCCCA---GG-------------UG---------UCGUAAACGCCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GCAAC
AACY023396835.1/453-636      AAUAACCAA-AAAUUACU-CUUGGAUCUAAAG---UUGGAUU-------AACAAGUUUGA----------CUUCACC--ACC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAUGCACCG-CCAAU-GAAA----------CACCAGUUCACUGACCA--UG-CCAA-UGCAC
AACY023496171.1/1091-1274    GAUAACCAA-GAAUGACU-CUCGGAUCUAAAG---UUGGGUU-------AACAAGUCUUA----------CUUCACC--ACC-GC----C-AG------GUGCCCA---UG-------------UA---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUGAUUGACCA--UG-CUAA-UGCAC
AY741371.1/66479-66665       CAUAACCAA-AAAUGAUU-AAAGGGUUUAACG---UAGGAGC----UGAGAUAAUUCUAA----------CAUCUCC--ACC-AC----C-UG------GAGCCCA---CG-------------UA---------UCGUAAACACCA-CCAA--CGAA----------ACAAGCUUUGGCAACAAG-UA-GGAA-ACAAC
AY876214.1/499-313           CAUAUCCGA-UGAUUACA-ACAGGGUUUAAAG---UAGGAUU----AUCGAUAAUACGUA----------CAUCUCC--ACC-AC----C-UG------GAGCCCA---CG-------------UA---------UCAUAUAAACCA-CCUA--CAUA----------AAGAGCUUUAAUUACUAA-UA-AUAA-AGCUC
AACY020415043.1/351-537      AAUAUCCAA-AAAUAACU-GAAGGGUCGUAAG---UUGGGUA----GUUAAUUACACGUA----------CAUCACC--ACC-CC----C-UG------GUGCCCA---UG-------------UA---------UCGUAAACUCCA-CCAA--AGUA----------CAUAGCCUUCCAAACAAG-AA-GCCA-ACACC
AY876208.1/499-313           CAUAAUUGA-AUAUCACU-UGAGGAUUUAAGG---UAGGGUU----AGAAAUAUAUCUAA----------CAUCUCC--UCC-AC----C-CG------GAGCCCA---UG-------------UA---------UCAUAAACACCG-CCAA--AGAA----------UAAAGAUUUGAACACUAA-UA-AGAA-GGCAC
CT978603.1/1481140-1480954   GAUAACCGA-AGAUCACA-CCAGGGCUGAGGG---UGGGGUU----CGUGAUCAGACGAA----------CGUCCCC--ACC-AC----C-GG------GUGCCCA---GG-------------UG---------UCGUACACACCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-CA-GCAG-GGCGC
AACY020459449.1/1080-1266    GAUAACCGA-AGAUCACA-CCGGGGUCGAGGG---UGGGGUU----CGUGAUCAAACGAA----------CGUCUCC--ACC-AC----C-UG------GAGCCCA---GG-------------UG---------UCAUAAACGCCA-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-GA-GCAG-GCAGC
AP006715.1/145620-145806     CAUAACCAA-AGAUAACU-AGGGGAUUAAGUG---UAGGAUU----GCUAACAAAUCUAA----------CAUCUCC--ACC-AC----C-UG------GAGCCCA---AG-------------UG---------UCGUAUACCCCA-CCAA--UAAA----------UAAAGCUUUAAUAACUAA-CA-GAAA-AGCGC
AACY020865073.1/554-371      GAUAACCAA-GAAUAACC-CUUGGAUCUAAAG---UUGGAUU-------UACAAGUCUAA----------CUUCUCC--ACC-AC----C-AG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUCACUGACCA--UG-CUAA-UGCAC
AY705208.1/760-574           AAUAACCAA-AUAUCACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUGA----------CAUCUC---CGC-CC----C-UG------GUGCCCA---GG-------------UA---------UCAUAUAUGCCU-CCAA--AAUA----------UAGAGCAUUGAGUACUAG-AAUAAAA-AGCAC
AB295926.1/637-451           AAUAACCGA-AAAUAAUG-UUGGGGCUAAGAG---UCAAAUU----UGUGAUUUUUCUAA----------CAUCUCC--UCC-AC----C-UG------GAGCCCA---GG-------------UA---------UCGUAUAUACCG-CCGA--AAAA----------CAAAGCUUUAAAUACGAG-AA-GAAA-AGCGC
AJ311683.1/544-367           GAUACCCAU-AGAUGACA-AAGGGAUCGAGAG---UAGGACU----UGUUACUACGCGGA----------CAUCAU-----------------------GAAUUGC---GG-------------AG---------UCAUAUAGUCCU-CCGA--AAAA----------CAUCGCUUUUGCCACCAG-UA-AUAA-AGCAC
DQ069643.1/601-415           AAUAACCAA-AUAUAACA-CUUGGG-CUAGUG---UUAAGUU----GGUUAUUUUUCUUA----------CAUCUCC--CCC-CC----CCAG------GAGCCCA---GG-------------UG---------UCAUAUACACCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AASG02001643.1/33662-33473   AAUAACCGA-AAAUAAUA-CUUGGGCUAAGGG---UUAAGUU----AGUAAUUUUUCUUACAU-------CUCCCCC--CCC-CC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
DQ366716.1/6989-6806         GAUAACCAA-GAAUAACU-CUUGGAUCUAAAG---UUGGGUU-------UACAAGUCUGA----------CUUCACC--ACC-AC----C-AG------GUGCCCA---CG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCA--UG-CUAA-UGCAC
AJ311694.1/544-367           GAUAGCCAU-AGAUCACA-AAAGGAUUGAGAG---UUGGUUC----AGUUACAAGGCGAA----------CAUCAU-----------------------GAAUAUU---CG-------------UG---------UCAUAAAUUCCU-CCCC--AAAA----------CAUGGCUUUACCUACCAG-CA-AUAA-AGCUG
DQ366718.1/24210-24393       GAUAACCAA-GAAUAACU-CUUGGAUCUAAAG---UUGGAUU-------AACAAGUCUGA----------CUUCACC--ACC-UC----C-AG------GCGCCCA---UG-------------UA---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUAACUGACCA--CG-CUAA-UGCAC
AACY022678378.1/540-723      GAUAACCAA-GAAUAACU-CUUGGAUCUAGUG---UUGGGUU-------AACAAGUCUGA----------CUUCGCC--ACC-UC----C-AG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCA--UG-CUAG-UGCAC
AACY020225090.1/429-612      GAUAACCAA-GGAUAAUU-CUAGGGUCGAGAG---UAGGAUU-------AACUAAUCUAA----------CUUCUCC--ACC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAAGCUCCU-CCUC--CAAA----------CAUCCAGUUAGCUGUGAA-GA-AUAA-AGCAC
AACY021151713.1/364-178      GAUAACCAA-AGAUCACA-CCGGGAUCGAGGG---UGGGGUU----GGUGAUCAGACGCA----------CGUCACC--ACC-GC----C-GG------GGGCCCA---GG-------------UG---------UCGUAGACGCCA-CCGA--AGAA----------CAUCGCCUUAAACACCAG-CA-GCAG-CGCAC
AACY022579995.1/687-870      GAUAACCAA-AAAUUACC-CUUGGAUCCAAAG---UUGGAUU-------AAUAAGGCGAA----------CUUCUCC--GCC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAUGCUCCA-CCAAU-AAAA----------CACCAGUUUACUGACCAA-G--CUAA-UGAAC
AACY020480390.1/813-630      GAUAACCAA-GAAUGACU-CUUGGGUCUAAAG---UUGGGUU-------AACAAGUCUGA----------CUUCACC--ACC-UC----C-AG------GUGCCCA---AG-------------UG---------UCAUAUGCACCA-CCAAU-AAAA----------CACCAGUUUAUUGACCA--UG-CUAA-UGCAC
AY705186.1/811-625           AAUACCCAA-ACAUCACG-CCUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUGA----------CAUCUCC--CCC-UC----C-GG------GUGCCCA---GG-------------UA---------UCAUAUACGCUU-CCAA--AAUA----------CAGAUCCUUGAGUACUAG-AA-GAAA-AGCAC
AACY020141787.1/783-966      GGUAACCAA-GUAUUACU-CUUGGAUCUAAUG---UAGGACU-------GACUAACCUAA----------CUUCUCC--ACC-AC----C-AG------GUGCCCA---UG-------------UA---------UCAUAAGCGCCU-CCGA--UGAA----------CAUCCAAUCAAAAACGAA-AA-AUAA-UGCAC
CP000552.1/1163838-1163655   GAUAACCAA-GGAUAACU-CUAGGAUCAAGUG---UUGGGUU-------GACAAGUCUUA----------CUUCUCC--UCC-UC----C-AG------GAGCCCA---UG-------------UA---------UCAUAAGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCAA-G--CUAA-UGCAC
AACY021880462.1/651-834      GAUAACCCA-AAAUGACU-CUUGGGUCUAAAG---UUGGAUU-------AACAAGUCUGA----------CUUCACC--ACC-AC----C-AG------GAGCCCA---UG-------------UA---------UCAUAUGCACCA-CCAAU-AAAA----------CACCAGUUUAUUGACCAA-G--CUAA-UGCAC
DQ864733.1/37438-37249       AAUAACCAA-AAAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUAACA-------UCUCCCC--CCC-CC----C-CG------GAGCCCA---GG-------------UA---------UCAUACACGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AACY020050500.1/1276-1090    AGUAUCCGA-AAAUAACU-GAUGGGUCGUAAG---UUGGGUA----GCUAAUUACACGUA----------CAUCACC--ACC-AC----C-UG------GUGCCCA---CG-------------UG---------UCAUAAACUCCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-AA-GCCA-ACAAC
AY876216.1/394-208           CAUAACCGA-AAAUGAUU-AAAGGGUUUAAUG---UCGGAGC----UGUAAUAAUACGAA----------CAUCACC--ACC-AC----C-UG------GAGCCCA---UG-------------UA---------UCGUAUACUCCA-CCAA--CGAA----------ACAAGCUUUGGCAACAAG-UA-AAAA-ACAAC
AACY021388426.1/341-158      GAUAACCAA-GAAUAACU-CUUGGGUCUAAAG---UUGGAUU-------AACAAGUCUGA----------CUUCACC--ACC-AC----C-UG------GUGCCCA---UG-------------UG---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCA--UG-CUAG-AGCAC
CP000435.1/817015-817201     AAUAACCAA-AGAUCACA-CCUGGAUCAAGAG---UUGGAUU----CGUGAUCAAACGAA----------CAUCUCC--ACC-AC----C-UG------GGGCCCA---GG-------------UG---------UCGUAGACGCCG-CCAA--AGAA----------CAUGGCCUUAAAGACCAA-AA-GGAG-GCAGC
AY876204.1/499-313           AGUAUCCAA-AGAUAAUG-GCUGGGUUUAAUG---UUGGAGU----UGAAACAAAUCUUA----------CAUCCCC--UCC-UC----C-UG------GAGCCCA---UG-------------UA---------UCAUACACACCA-CCUA--CAAA----------CAGAGCUUUAAUAACUAG-UA-AAAA-UGAUC
EF153940.1/1509-1323         AAUAACCAA-AUAACCUA-CUUGGGUUAAGGG---UCAAGUU----GGUAAUUCUUCUUA----------CAUCUCC--ACC-CC----C-GG------GUGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCUUUGAGGACCAG-GA-GAAA-GGCUC
AF137379.1/46146-45960       UGUAGCCAA-AAAUGACA-GCUGGACUGGUUG---UUGGAUU----AGUAAUCACGCGAA----------CAUCACC--GCC-GC----C-UG------GUGCCCA---UG-------------UG---------UCAUAAACGCCA-CCCA--AGUA----------ACGAGCUUUGAGAACCAA-CA-GCAA-AGCAC
AP008231.1/968997-969183     GGUAGCCGA-AGAUCACA-GCCGGGUUGAGGG---UUGGGUU----GGAGAUGAUGCGGA----------CAUCGCC--ACC-AC----C-CG------GCGCCCA---GG-------------UG---------UCAUAGACACCG-CCGA--AGAA----------CAUGGCCUUAAAGACCAG-CA-AGAA-GGCAC
AY286123.1/11511-11697       AAUAACGAA-AGAUUAUA-GCUGGAUUUAGUG---UUGGAUU----UGAGACCAAUCGCA----------CAUCUCC--ACC-AC----C-UG------GUGCCCA---AG-------------UG---------UCAUACACACCU-GACA--GAAA----------CAUGGCUUUGAUUACUAA-UA-AAAA-CGCAC
AF354643.1/1714-1531         GAUAACCAA-GUAUUACU-CUUGGAUCUAAAG---UUGG-------ACUAACCAAUCUAA----------CUUCUCC--UCC-AC----C-GG------GAGCCCA---UG-------------UG---------UCAUAAGCACCA-CCGA--UAAA----------CAUCCAAUCUGCGACGAA-AA-AUAA-AGCAC
AACY021436835.1/668-854      CAUAACUGA-AGAUUACU-AAUGGGUUUAAUG---UAGGGUU----UUUAACAAGACGUA----------CAUCUCC--UCC-AC----C-UG------GAGCCCA---AG-------------UG---------UCAUAAACACCA-CCAA--CAUA----------CAUAGCUUUGGCUACUAA-UA-AAAA-CGCUC
AACY020078041.1/1064-878     GAUAACCGA-AGAUCACA-CCAGGGCUGAGGG---UUGGGUU----GGUGAUCAGGCGAA----------CAUCGCC--ACC-AC----C-AG------GGGCCCA---GG-------------UG---------UCGUAAACACCG-CCGA--AGAA----------CAUGGCCUUGAAGACCAG-GA-GCAG-GGCAC
AAVU01000074.1/448-262       GAUAACCGA-AGAUCACA-GCCGGGUUCAAUG---UGGGGUU----AUUGAUGACUCGGA----------CAUCUC-----------------------CACCACC---GGGCGCCCAAC----UA---------UCGUAGACACCG-CCAA--AGAA----------CAUGGCUUUAAACACCAG-CA-ACAG-CGCAC
AF481844.1/506-320           GAUAACCAA-AGACGACA-GCAGGGCUAAGUG---UUAAGUU----AGUAAUCUUACGCA----------CUCCACC--CCC-UC----C-AG------GAGCCCA---UG-------------UA---------UCAUAAAUGCCG-CCAA--AAAA----------GACAGCUUUUCCUACAAG-UA-AGAG-AGCAC
AY673996.1/37840-37654       CAUAUCCAA-AUAUGAUA-GCUGGGUUUAAAG---UUGGGUU----AUUAAUUAAUCGUA----------CAUCUCC--UCC-AC----C-AG------GAGCCCA---UG-------------UG---------UCAUAUACUCCA-CCGA--AAAA----------UAAAGCUUUAAUCACAAG-UA-AAAA-CGACC
AY116657.1/1566-1380         AAUAACCAA-AUAUGAUA-CUUGGGCUAAGGG---UCAAGUU----AGUAAUUCUUCUUA----------CAUCUCC--CCC-CC----C-GG------GAGCCCA---AG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUAAGCACUAG-GA-GAAG-GGCGC
EF508371.1/16590-16776       CGUAUCCAA-UGAUUACU-ACAGGAUUUAAUG---UUGGGUU----GUCAAUGAUACGUA----------CAUCUCC--UCC-AC----C-UG------GAGCCCA---CG-------------UA---------UCGUAUAAACCA-CCAA--CAUA----------CAUAGCUUUUACUACUAG-UA-GUAA-AGCUC
AY876211.1/499-313           UGUAUCCGA-AUAUAAUA-AGCGGAUUCAGUG---UAGGAUU----AUUAAUAAAUCUUA----------CAUCACC--UCC-AC----C-AG------GCGCCCA---UG-------------UA---------UCAUAAACACCG-CCAA--CAAA----------UAAAGCUUUUAUAACUAA-UA-AGAA-AGAAC
AACY023410220.1/156-339      GAUAACCAA-AAAUUACC-CUUGGAUCCAAUG---UUGGGUU-------UAUAAGUCGGA----------CUUCUCC--UCC-AC----C-AG------GGGCCCA---AG-------------UA---------UCAUAUGCACCG-CCAAU-AAAA----------CACCAGUUUACUGACCAA-G--CUAA-UGCAC
AY876205.1/472-286           GGUAUCGAA-AGAUAAUC-GCUGGAUUUAAUG---UCGGAUU----AGAGAUCAAUCUUA----------CAUCUCC--ACC-AC----C-UG------GAGCCCA---UG-------------UA---------UCAUACACACCG-GAGA--UAAA----------CAUGGCUUUGAUCACUAG-AA-GGAA-AGCAC
AACY022173898.1/421-235      CAUAUCCAA-AAAUUACU-AAUGGAUUUAACG---UCGGGUU----UUUGAUUAAACGAA----------CAUCUCC--UCC-AC----C-UG------GAGCCCA---UG-------------UG---------UCAUAAACUCCA-CCUA--UGUA----------CAUUGCUUUUGCAACUAA-UA-AGAA-UGAUC
AB086179.1/51677-51491       AAUACCCAA-AAAUAAUA-CUCGGACUAAGUG---UAAGAUU----UGUGAUUUCUCUUA----------CAUCUCC--ACC-AC----C-AG------GAACCCA---GG-------------UA---------UCGUAUACACCU-CCGA--AAAA----------UGAAGCCUUGAAUACCAG-GA-GAGA-AGCAC
AACY023137906.1/312-495      GAUAACCAA-GAAUUACU-CUUGGAUCUAAGG---UUGGACU-------AACCAAUCUGA----------CUUCUCC--ACC-AC----C-GG------GGGCCCA---UG-------------UG---------UCAUAAGCACCA-CCAA--UAAA----------CAUCCAAUCAGCUACGAA-AA-AUAA-AGCAC
BA000019.2/4818079-4818256   AAUAACCGA-AAAUUAUG-CCUGGGUUAAGAG---UAGGGUU----AGUAAUCGAGCGUA----------CAUCUC-----------------------CCAAAUU---AG-------------UG---------UCAUAAAUGCCG-CCAA--AAAA----------CAUGGCUUUUAGCACUAG-UA-AGAA-UGCUC
AY705196.1/827-641           AAUAGCCAA-AUAUCACG-CUUGGGCUAAGCG---UCAAGUU----GGUAANUUUUCUUA----------CAUCUC-----------------------CCCCUCC---GGGUGCCCAAG----CA---------UCAUAUACGCCU-CCAA--AAUA----------CAGAGAUUUGAGUACUAG-AA-GAAG-AGCAC
AF239796.1/1255-1069         AAAAACCAA-AAAUAGUG-UUGGGACUUAAAG---UAAGAUU----CGUUAUUUUUCUCA----------CAUCUCC--ACC-AC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUAUACCG-CCAA--AAAA----------CAAAGCUUUUAGCACUAG-AA-GAAA-AGCGC
AY178864.1/32150-32336       GGUAACCAA-AGAUAAUA-UUGGGGUUUAGAG---UAAGAUU----CGUAAUUUCUCUUA----------CAUCUC-----------------------CGCCACC---GGGUGCCCAUG----UA---------UCAUACAACCCU-CCGA--AAUA----------GAGUGCUUUGAAAACCAG-UA-GGAA-AGCGC
AY876217.1/499-313           CAUAGUUGA-AAAUAGCA-CCUGGGUUUAAAG---UAGGGUU----AGCUACAACACGUA----------CGUCUCC--ACC-AC----C-UG------GAGCCCA---AG-------------UA---------UCAUAAAGACCU-CCAA--AGAA----------CAUAGCCUUUAAAACAAG-AA-GGAA-AGCUC
AF239787.1/1573-1387         AAUAACCAA-AUAUAAUA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUAUGCCC-CCCC--CAAA----------AAUAGCUUUGAAUACWRR-AR-GAAA-AGCAC
AF123815.1/1566-1380         AAUAACCAA-AUAUAAUG-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUCUUCUUA----------CAUCCCC--CCC-AC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAACACUAG-GA-GAAA-AGCGC
AACY021756203.1/399-585      CGUAACCAA-AGAUAACA-CCUGGGUUUAAAG---UAGGGUU----AUCAAUGAUUCUUA----------CAUCACC--ACC-AC----C-UG------GUGCCCA---UG-------------UA---------UCGUAAAGACCG-CCAA--CAUA----------UAAAGCUUUAAUAACUAG-UA-AUAG-UGCUC
AY705203.1/827-641           AAUAACCAA-AUAUCACG-CUUGGGCUAAGGG---UAAAGUU----GGUAAUUCUUCUUA----------CAUCUC-----------------------CCCCUCC---GGGUGCCCAAG----UA---------UCAUAUACGCCU-UCAA--AAGA----------AAGAGCUUUGAGCACCAG-AA-GAAA-AGCAC
DQ308461.1/469-283           CAUAAGAAA-AAAUAACU-UGUGGAUUUAAUG---UUGGAUU----AGUAAUAUAUCUCA----------CAUCUCC--UCC-UC----C-UG------GCGCCCA---UG-------------UA---------UCAUAUACGCCA-CCAA--AGAA----------UAAGGCUUUAACAACCAA-UA-AAAA-UGAUC
AAVW01000085.1/19826-20012   AAUAACCGA-AGAUUACA-GCAGGGUUUAAUG---UUGGGUU----AGUAAUAACACGAA----------CAUCACC--ACC-AC----C-AG------GGGCCCA---AG-------------UA---------UCGUACACACCG-CCAA--AGAA----------CAUUGCCUUCAGCACCAA-CA-GCAA-CGCAC
EF067920.1/13993-14179       CAUAACCAA-AAAUUACA-AUUGGGUUUAAUG---UAGGUGU----UGUAAUUAAACGAA----------CAUCGCC--ACC-AC----C-UG------GUGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--UGUA----------CAUUGCUUUAGCAACUAA-UA-AAAA-AGCAC
AF481839.1/506-320           GAUAACCAA-AUAUUGUA-CUAGGAUUCAGAG---UUAUAUU----AGUAAUUUUUCUAA----------CAUCUCC--UCC-UC----C-UG------GUGCCCA---AG-------------UA---------UCAUAAAGACCU-CCAA--ACCA----------GAUCGCUUUUGCCACUAA-UA-GUAA-UGCAC
AY876210.1/499-313           CGUAUCCAA-AAAUUACU-GAAGGGUUUAAAG---UUGGGUU----AUUAAUUAAUCUUA----------CAUCUCC--ACC-UC----C-UG------GUGCCCA---UG-------------UA---------UCAUAAACACCA-CCAA--AGAA----------AAGAGCUUUGAUAACUAA-UA-GAAA-AGAUC
AF528929.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUGAGGG---UCAAGUU----GCUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-CG------GGGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGGGCCUUGAGUACUAG-AA-GAAA-GGCAC
DQ897681.1/47242-47056       AAUAACCAA-AUAGAACA-CUUGGGCUAAGGG---UCAAAUU----AGUGAUUUUUCUGA----------CAUCUCC--CCC-CC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUACACCC-CCAA--AAGA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCGC
AY705211.1/813-627           AAUAACCAA-AUAUCACG-CUCGGGCUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-GG------GUGCCCA---UG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------AAGGGCCUUGAGUACUAG-AA-GAAA-AGCAC
BA000022.2/1348259-1348445   GAUAGCCGA-AGAUAAUC-GCCGGGUUGAGGG---UGGGGUU----AGUGAUCACCCGUA----------CGUCCCC--ACC-AC----C-GG------GGGCCCA---GG-------------UG---------UCGUAUACACCG-CCAA--AGAA----------CAUGGCUUUAAAGACCAG-UA-ACAG-AGCAC
AY147671.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUNUUA----------CAUCUCC--CCC-CC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACGCCC-CCNA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
CR954199.2/786-972           AGUAUCCGA-AAAUAACU-GAAGGGUCGUAAG---UUGGGUA----GCUAAUUACACGUA----------CAUCACC--ACC-AC----C-AG------GUGCCCA---UG-------------UA---------UCAUAAACUCCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-AA-GCCA-AGCAC
AY147642.1/1566-1380         AAUAACCAA-AAAUCACG-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUNUUA----------CAUCUCC--CCC-CC----C-CG------GGGCCCA---GG-------------UA---------UCGUAUACGCCU-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-GGCAC
AP004638.1/36026-36212       GAUAACCAA-AAAGAAUA-CUUGGACUAAGAG---UAAGGUU----UGUAAUUUUUCUUA----------CAUCCCC--ACC-UC----C-GG------GUGCCCA---UG-------------UG---------UCAUAGACACCG-CCAA--AGUA----------CACAGACUUUAAUACUAA-AA-GGAA-AGCAC
AF041468.1/14421-14607       CAUAACCAA-AUAUAACA-GCUGGAUUUAAAG---UUGGAUU----AUCAAUUAUUCUAA----------CAUCUCC--UCC-AC----C-UG------GAGCCCA---UG-------------UA---------UCGUAUAAACCA-CCAA--CAUA----------AAUAGCUUUUAUAACUAA-UA-AUAA-UGCAC
EF153938.1/770-584           AAUAACCAA-AUAGAACA-CUAGGGCUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-UG------GGGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------AAGAGCCUUAAGUACUAG-AA-GAAA-AGCAC
AF481848.1/506-320           GAUAACCAA-AUAUUGUA-CUAGGAUUGAGAG---UUAUAUU----AGUAAUUUUUCUAA----------CAUCUCC--UCC-UC----C-UG------GUGCCCA---AG-------------UG---------UCAUAAAGACCU-CCAA--ACCA----------AAUUGCUUUUGCAACUAA-UA-AAAA-UGCAC
AY465670.1/1566-1380         AAUAACCAA-AUAUGACA-CUUGGGCGAAGGG---UCAAGUU----GGUAAUUUUUNUUA----------CAUCUCC--CCC-CC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUAUGCCC-CCAA--AAUA----------AACAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AF462407.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGUUAAGUG---UUAUGUU----UGUAAUUUUUCUUA----------CAUCUCC--ACC-GC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACACCA-CCGA--AAUA----------CAAAGCCUUGAGCACUAG-GA-GGAA-AGCGC
AY705179.1/806-620           AAUAACCAA-AUAUCACG-UUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUGA----------CAUCUCC--UCC-CC----C-GG------GUGCCCA---GG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------CAGAGCCUUGAGUACUAG-AA-GAAA-AGCGC
AY958086.1/47888-48074       AAUAUCCAA-AUAUUACU-CCAGGGUUAAGAG---UGAUAUU----UGUGAUUUUUCUUA----------CAUCUCC--GCC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUACAAACCA-CCAA--AAUA----------UAGUGCUUUGAAUACAAG-CA-AAAA-UGCAC
EF506945.1/54725-54539       GGUAACCAA-AGAUAACA-GCUGGGCUAGUUG---UUGGAUU----UGUUAUAACACGAA----------CAUCUCC--ACC-GC----C-GG------GCGCCCA---AG-------------UA---------UCAUAAACCCCA-CCAA--AGUA----------AAGAGCUUUCCAAACAAG-GA-GCCA-AGCAC
AY705207.1/813-627           AAUAACCAA-AUAUCACG-CUUGGGCUAAGAG---UCAAGUU----AGUAAUUUUUCUUA----------CAUCUC-----------------------CCCCUCC---GGGCGCCCAAG----UA---------UCAUAUACGCCU-CCGA--AAUA----------CCUAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AY363056.1/538-352           AAUAACCAA-AGAUCACG-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-GG------GUGCCCA---GG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AF481849.1/506-320           AAUAACCAA-ACACAAUA-CUAGGGUUUAGAG---UAAGAUU----UACAAUUUUUCUUA----------CAUCUCC--ACC-AC----C-AG------GAGCCCA---AG-------------UA---------UCAUAUACACCA-CCAA--ACCA----------UAAAGCUUUGAACACUAA-UA-AAAA-UGCAC
AF481845.1/506-320           UGUAACCAA-AAAUAACG-GCUGGGCUAACAG---UUGGGUU----UGUAAUUAAACGUA----------CAUCACC--ACC-AC----C-UG------GGGCCCA---AG-------------UA---------UCAUAAACUCCA-CCAA--AAUA----------UAAUGCUUUCCAAACUAA-AA-GCCA-AGCUC
AY705192.1/827-641           AAUACCCAA-AUAUCACA-CUUGGGCUGAGGG---UAAAGUU----GGUAAUCUUUCUGA----------CAUCCCC--CCC-UC----C-GG------GUGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------CAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
BA000039.2/1704142-1703956   GAUAGCCAA-AAAUUACC-CUUGGGUCAAGGG---UGGGGUU----GGUAAUGACGCGGA----------CAUCGCC--GCC-AC----C-GG------GUGCCCA---AG-------------UG---------UCGUAGAGGCCA-CCAA--AGAA----------CAUUGCUUUGGCCACCAA-AA-GUAA-AGCAC
AY147645.1/1566-1380         AAUAACCAA-AUAUAACG-CCCGGGCUAAGGG---UCAAGUU----GGUUAUUUUUCUGA----------CAUCCCC--CCC-CC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUAAGUACUAG-AA-GAAA-AGCAC
AF528934.1/1566-1380         AAUAACCAA-AUAUAAUA-CUUGGGCUAAGGG---UGACGUU----GGUAAUUUUUCUUA----------CAUCCCC--CCC-CC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCGC
AF528919.2/1566-1380         AAUAACCAA-AUAUAGUA-CCUGGAUUAAGCG---UAAGGUU----CGUAAUUUUUCUUA----------CAUCUCC--ACC-AC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUAUGCCA-CCAA--AAUA----------AAAAGCCUUGAACACUAG-GA-GAAA-GGCAC
AY147676.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUNUUA----------CAUCCCC--CCC-CC----C-UG------GGGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------AAGAGCCUUAAGUACUAG-AA-GAAA-GGCAC
DQ317523.1/26456-26642       AAUAUCCAA-AUAUAAUA-CUUGGACUAAGGG---UCAAAUU----GGUUAUUUUUCUUA----------CAUCUCC--GCC-CC----C-CG------GAGCCCA---CG-------------UA---------UCAUAUAUACCU-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-CGCAC
AY465687.1/1566-1380         AAUAACCAA-AUAUAACG-CUUGGGCUAAGGG---UCAAGUU----GAUAAUUUUUCUUA----------CAUCUCC--GCC-CC----C-GG------GGGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUAAAUACGAG-AA-GAAA-AGCAC
CP000117.1/1530930-1530744   AAUAACCGA-AGAUUACA-GCUGGGUUCAGUG---UGGGAUU----AGUAAUUACACGUA----------CAUCACC--ACC-AC----C-AG------GGGCCCA---GG-------------UG---------UCAUAGACACCA-CCAA--AGAA----------CAUUGCUUUCAAUACCAA-CA-GCAA-CGCAC
AC145820.20/98759-98573      AAUAACCGA-AUAUAAUA-CUUGGACUAAGGG---UUAAGUU----UGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUAUACCU-CCAA--AAUA----------AGAAGCCUUAAAUACUAG-AA-GAAA-AGCCC
AP002983.1/26804-26990       AAUAACCAA-AUAUAAUA-CUUGGACUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-GG------GAGCCCA---AG-------------UA---------UCAUAUAUACCC-CCAA--AAUA----------AGAAGCCUUGAAUACUAG-AA-GAAA-AGCCC
DQ383815.1/34141-33955       AAUAACCAA-AUAUGAUA-CUUGGGCUAAGCG---UCAAGUU----GGUGAUUUUUCUUA----------CAUCUCC--UCC-UC----C-CG------GAGCCCA---AG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AY147673.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-GG------GGGCCCA---GG-------------UA---------UCAUAUACNCCC-CCAA--AAUA----------AANAGCCUUGANUACUAN-AA-NAAA-ANCAC
AF528920.1/1566-1380         AAUAACCAA-AUAUAAUA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--ACC-CC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AY876219.1/499-313           CAUAUCCAA-AAAUAACU-AAUGGAUUUAGCG---UUGGGCU----AUUGAUAAAACGAA----------CAUCACC--ACC-AC----C-GG------GUGCCCA---AG-------------UA---------UCAUAAAUACCA-CCAA--CAAA----------CAUUGCUUUAAUUACUAA-UA-AGAA-UGAAC
DQ069644.1/637-451           AAUAACCAA-AUAGAACA-CUUGGGUCAAGAG---UCAGGUU----CGUAAUUCUUCUUA----------CAUCUCC--ACC-AC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------CAAAGCCUUGAGCACUAG-GA-GAAA-AGCAC
AF528943.1/1566-1380         AAUAACCAA-AUAUAGCA-CUUGAGUUAAGUG---UAAGGUU----CGUAAUUUUUCUUA----------CAUCUCC--ACC-GC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUAUGCCA-CCAA--AAUA----------UAAAGCCUUAAACACUAG-AA-GAAA-AGCAC
AY705177.1/827-641           AAUAACCAA-AUAUCACA-CUUGGGCUAAAGG---UCAAGUU----GGUAAUUUUUCUAA----------CAUCUCC--CCC-CC----C-CG------GGGCCCA---GG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------CAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AY705204.1/827-641           AAUAACCAA-AUAUCACG-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUC-----------------------CCCCUCC---GGGUGCCCAAG----UA---------UCAUAUAUGCCU-CCAA--AAUA----------AAGAGCUUUGAGUACUAG-AA-GAAA-AGCAC
EF067921.1/53541-53355       CGUAACCGA-AAAUUACG-AUUGGAUUUAAUG---UUGGAGU----UGUAAUAUAACGAA----------CAUCACC--ACC-AC----C-CG------GUGCCCA---UG-------------UA---------UCGUAAACACCA-CCUA--AGUA----------CAUAGCUUUUGCAACUAA-UA-AUAA-UGCAC
AY147641.1/1566-1380         AAUAACCAA-AUAUAACC-UUUGGGCUAAGAG---UCAAGUU----AGUAAUUUUUCUGA----------CAUCCCC--CCC-CC----C-GG------GUGCCCA---GG-------------UA---------UCGUAUACGCCU-CCAA--AAUA----------AAGAGCCUUAAGUACUAG-AA-GAAA-AGCAC
DQ851108.1/5527-5341         AAUAACCAA-AAAUAGUA-GCAGGACUAAUAG---UUGCGUC----AGUAAUUAAACGAA----------CGUCACC--ACC-UC----C-AG------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCGA--AAUA----------UGAAGCUUUUAAAACUAA-UA-ACCA-AGAUC
AF022186.2/2628-2442         GAUAGCUAA-AAAUAAUU-GCUGGAUUUAAUG---UUGGAUU----AGUAAUGAAUCUAA----------UAUCUCC--UCC-CC----C-AG------GAGCCCA---UG-------------UA---------UCAUAAAUUCCA-CCUA--UAAA----------UAGUGCUUUAAUAACUAA-CA-AAAA-UGCUC
AY147658.1/1566-1380         AAUAACCGA-AUAUAACG-CUUGGACUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAUAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AADV02000249.1/1086-900      GAUAGCCGA-AAAUAAUU-GCGGGGUUCAAAG---UAGGAUU----AGUAAUCACACGCA----------CAUCUCC--GCC-AC----C-AG------GAGCCCA---AG-------------UG---------UCAUAGACACCG-CCAA--AGAA----------CAUGGCUUUGAACACCAA-CA-AUAG-CGCAC
AY876226.1/499-313           AAUAACCAA-AGAUUACU-UGUGGAUUUAAGG---UGGGGUU----ACUUAUUACCCGCA----------CAUCUCC--GCC-GC----C-AG------GUGCCCA---AG-------------UA---------UCGUAAACACCA-CCAA--AAAA----------CAUUGCUUUAAAUACUAA-AA-GGAA-CGCAC
AY876221.1/469-283           CAUAACCAA-AAAUUACA-AUUGGGUUUAAUG---UUGGCGU----UGUAAUAUAACGAA----------CAUCGCC--ACC-AC----C-UG------GUGCCCA---UG-------------UA---------UCAUAAACACCA-CCUA--AGUA----------CAUAGCUUUUGCAACUAA-UA-AUAA-UGAUC
AY465679.1/1566-1380         AAUAACCAA-AUAUAACG-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--GCC-UC----C-CG------GGGCCCA---GG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------AAGAGCUUUAAGUACUAN-AA-AAAA-AGCAC
AY147651.1/1566-1380         AAUAGCCAA-AUAUAACA-CUAGGGCUAAGAG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-UC----C-CG------GGGCCCA---AG-------------UA---------UCAUAUAUGCCA-CCAA--AAUA----------AAGAGCUUUGAGUACUAG-AA-GAAA-AGCGC
AY147652.1/1566-1380         AAUAACCAA-AUAUAAUA-CUUGGGCUAAGGG---UCAAGUU----AGUAAUUUUUCUUA----------CAUCCCC--CCC-UC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AY147655.1/1566-1380         AAUAACCAA-AAAUAACG-CCCGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-UG------GGGCCCA---GG-------------UA---------UCAUAUACCCCC-CCAA--AGUA----------AAGGGCCUUAAAUACUAG-AA-GAAA-AGCAC
EF380351.1/37258-37072       AAUAACCAA-AUAUAACA-CUUGGACUAAGGG---UCAAAUU----UGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-AGCGC
AAXW01000009.1/79515-79701   GAUAGCCGA-AGAUAAUU-GCGGGGUUAAGGG---UAGGGUU----AGUAAUCACACGCA----------CAUCUCC--GCC-AC----C-AG------GUGCCCA---AG-------------UG---------UCAUAGACACCA-CCAA--AGAA----------CAUGGCUUUGAACACGAG-UA-ACAG-CGCAC
AF528926.1/1566-1380         AAUACCCAA-AUAUAACA-CUUGGACUAAGAG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCUUUAAAUACUAA-CA-GAAA-GGCAC
AY664839.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGUUAAGAG---UUAGGUU----CGUAAUUUUUCUCA----------CAUCCCC--ACC-GC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACACCA-CCAA--GAUA----------CAAAGCCUUGAGCACUAG-UA-GAAA-AGCGC
AC136521.2/141575-141389     AAUAACCAA-AUAUAACA-CCGGGGCUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUAUAUCG-CCAA--AAUA----------AAGAGCUUUGAGUACUAG-AA-GAAA-AGCAC
Z67753.1/87948-88134         CAUAACCAA-AGAUUACG-AUUGGAUUUAAUG---UUGGCGU----UGUAAUUAAACGAA----------CGUCACC--ACC-AC----C-UG------GCGCCCA---UG-------------UA---------UCAUAAACACCA-CCUA--AGUA----------CAUUGCUUUAAUAACUAA-UA-AGAA-UGAAC
AF123823.1/1561-1375         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----AGUAAUUCUUCUUA----------CAUCUCC--CCC-CC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------AAGAGCCUUGAGCACUAG-GA-GAAA-AGCAC
AY876222.1/466-280           CGUAACCAA-AAAUUACA-AUUGGGUUUAAUG---UUGGUGU----UGUAAUAAAACGAA----------CAUCACC--ACC-AC----C-AG------GUGCCCA---UG-------------UA---------UCAUAUACACCA-CCUA--AAUA----------CAUUGCUUUGAUAACUAA-UA-AGAA-AGCAC
AF239781.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----AGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAAA----------AAGAGCCUUAAAUACUAA-AA-GAAA-AGCAC
AY147667.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GUUAAUUUUUCUUA----------CAUCUCC--ACC-CC----C-GG------GGGCCCA---GG-------------UA---------UCAUAUACACCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-GGCAC
AJ506156.2/39473-39287       AAUAACCAA-AUAUAACA-CUUGGGCUAAGUG---UCAGGUU----GGUUAUUUUUCUUA----------CAUCUCC--GCC-AC----C-GG------GGGCCCA---GG-------------UA---------UCAUAUACGCCU-CCAA--AAUA----------AAGAGCCUUGAACACUAG-GA-GAAA-AGCGC
AY147640.1/1566-1380         AAUAACCAA-AAAUAAUG-CUUGGGCUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-UC----C-GG------GAGCCCA---AG-------------UA---------UCAUAUAUGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AY147650.1/1566-1380         AAUAACCAA-AUAUGAUA-CUUGGGCUCAAGG---UCAAAUU----GGUAAUCUUUCUUA----------CAUCUCC--ACC-CC----C-GG------GAGCCCA---AG-------------UA---------UCAUAUAUACCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AJ316582.1/35870-35684       AAUAACCAA-AUAUGAUA-CUCGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUACACCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AB112503.1/509-323           AAUAACCAA-AUACAAUA-CUUGGACUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUACACCC-CCAA--AAUA----------AAGAGCCUUAAAUACUAG-AA-GAAA-AGCAC
AY699173.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGAG---UUGGGUU----CGUAAUUUUUCUUA----------CAUCUCC--ACC-AC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------CAAAGCCUUGAGCACUAG-AA-GAAA-AGCAC
AF239789.1/1567-1381         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UUAAGUU----GGUUAUUUUUCUUA----------CAUCUCC--CCC-CC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACGCCA-CCAA--AAUA----------AAGAGCUUUAAAUACUAG-AA-GAAA-AGCGC
AC189190.1/42758-42944       AAUAACCAA-AUAUAACA-CUUGGGCUAAGAG---UCAAGUU----UGUAAUUUUUCUUA----------CAUCCCC--CCC-UC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------GAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AY147675.1/1566-1380         AAUAACCAA-AUAUAACA-CUUGGGCUAAGUG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCCCC--CCC-CC----C-GG------GUGCCCA---GG-------------UA---------UCAUAUAUACCU-CCAA--AAUA----------AAGAGCCUUGAAUACUAA-AA-GAAA-AGCAC
AB001684.1/33956-34142       UGUAGCUAA-AGAUAACA-CCAGGACUUACUG---UUGGGUU----UGAAAUAAUACGAA----------CAUCACC--ACC-AC----C-AG------GAGCCCA---UG-------------UA---------UCAUAAAUUCCG-CCAA--AGUA----------CAUUGCCUUCCAAACUAA-AA-GCCA-AGCAC
DQ196176.1/601-415           AGUAACCAA-AAACAACA-CCGAAGUUUGUAG---UUGGGUU----AGUAAUAAUUCUAA----------CGUCAC-----------------------CACCACC---CGGAGCCCAAG----UG---------UCAUAAAUACCA-CCAA--AGUA----------CAUAGCUUUUAAAACUAA-UA-ACCA-AGCAC
EF380353.1/34286-34100       AAUAACCAA-AUAUAACG-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-UG------GGGCCCA---AG-------------UA---------UCGUAUACACCA-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AY147657.1/1566-1380         AAUAGCCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-CC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUAUACCC-CCAA--AAUA----------AACGGCCUUGAGUACUAG-AA-GAAA-AGCAC
AF239793.1/1566-1380         AAUAACCAA-AUAUGACA-CUUGGAUUAAGUG---UCAGGUU----CGUAAUUUUUCUUA----------CAUCUCC--ACC-GC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACACCG-CCAA--AAUA----------AAAAGCCUUGAACACUGG-AA-GAAA-AGCAC
AY660566.1/54262-54448       AAUAACCAA-AUACAACA-CUUGGAUUAAGAG---UAAGAUU----UGUAAUUUUUCUUA----------CAUCUCC--ACC-AC----C-GG------GAGCCCA---CG-------------UA---------UCGUAUACACCU-CCAA--AAUA----------CAAAGCUUUGAGCACUGA-AA-GAAA-AGCAC
AY664841.1/1566-1380         AAUAACCAA-AUAUAACA-CCUGGGUUAAGCG---UAAGAUU----CGUUAUUUUUCUUA----------CAUCUCC--ACC-GC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUAUGCCA-CCAA--AAUA----------CACAGCCUUGAAUACUAA-GA-GAAA-AGCAC
DQ821119.1/40660-40846       AAUAACCGA-AUAUAACA-CUUGGACUAAGAG---UAAGGUU----CGUAAUCUUUCUUA----------CAUCCCC--ACC-UC----C-AG------GCGCCCA---UG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------UAGAGCUUUGAACACUAA-UA-AAAA-AGCAC
AY465665.1/1512-1326         AAUAACCAA-AUAUAACA-CCGGGGUUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-GC----C-UG------GGGCCCA---AG-------------UA---------UCAUAUAAGCCG-CCAA--AAUA----------GAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AF239782.1/1536-1350         AAUAACCAA-AUAUAACA-CUUGGGCUAAGUG---UUAAGUU----GGUUAUUUUUCUUA----------CAUCUCC--ACC-CC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUACUCCC-CCAA--AAUA----------AAGAGCCUUAAGUACUAG-AA-GAAA-AGCAC
AP008956.1/34089-33903       AAUAACCAA-AAAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCUUUGAAUACUAG-AA-GAAA-AGCAC
AF123817.1/1563-1377         AAUAACCAA-AUAUCACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-AG------GAGCCCA---AG-------------UA---------UCAUAUACACCC-CCAA--AAUA----------AAGAGCUUUAAAUACUAA-AA-GAAA-AGCAC
DQ422812.2/3560-3374         GGUAUCCAA-AAAUGGUU-GCAGGGUUUCCAG---UAGGAUU----UGUAAUAACUCUUA----------CAUCUC-----------------------CACCUCC---UGGUGCCCAAG----UA---------UCAUAAACACCG-CCAA--AAUA----------CAUAGCUUUUCCUACUAG-UA-GUAG-AGCAC
X13366.1/1942-1756           AAUAACCAA-AUAUAACA-CUGGGACUAAGGG---UCAAAUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUACACCG-CCAA--AAUA----------AAGAGCCUUGAGUACUAG-AA-GAAA-AGCAC
AF525948.2/1566-1380         AAUAACCAA-AUAUAGCC-ACUGGGUUAAGCG---UAAGGUU----CAUAAUUUUUCUUA----------CAUCUCC--ACC-GC----C-AG------GAGCCCA---GG-------------UA---------UCAUAUAUGCCA-CCAA--AAUA----------CAAAGCCUUGAAGACUAG-AA-GAAA-AGCAC
AY465664.1/1566-1380         AAUAACCAA-AAAUGAUG-CUGGGGCUAAGAG---UUAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-AC----C-UG------GAGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------AACAGCUUUAAAUACCAG-AA-GAAA-AGCAC
AY465671.1/1565-1379         AAUAACCAA-AUAUCACA-CUAGGGUUAAGUG---UCAAAUU----GGUAAUCUUUCUUA----------CAUCUCC--UCC-AC----C-AG------GGGCCCA---GG-------------UA---------UCAUAUAUACCC-CCAA--AAUA----------AAGGGCUUUGAAUACUAA-AA-GAAA-AGCAC
AF462401.1/1566-1380         AAUAGCCAA-AUAUAGCA-CUUGGGUUAAGAG---UCGGGUU----CGUAAUUUUUCUUA----------CAUCUCC--ACC-GC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACACCU-CCAA--AAUA----------CAAAGCCUUGAGCACUAG-AA-GAAA-AGCAC
AF123826.1/1564-1378         AAUAACCAA-AUAUAACA-CUUGGACUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-CC----C-GG------GAGCCCA---GG-------------UG---------UCAUAUACGCCU-CCAA--AAUA----------AAGAGCUUUGAAUACUAG-AA-GAAA-UGCAC
AF481843.1/506-320           AAUAGCCAA-AAAUAACA-GAAGCACUUGUAG---UUGGGUU----AGUAAUUAUACGAA----------CAUCUC-----------------------CACCACC---UGGUGCCCAAG----UA---------UCAUAAACACCU-CCAA--AAUA----------UAAUGCUUUCCAAACUAA-UA-GCCA-UGCUC
AY664840.1/1566-1380         AAUAACCAA-AAAUAACA-CUUGGGUUAAGUG---UUAAGUU----CGUAAUUUUUCUUA----------CAUCUCC--ACC-GC----C-GG------GAGCCCA---AG-------------UA---------UCAUAUACACCG-CCAA--AAUA----------CAAAGCCUUGAGCACUAG-AA-GAAA-AGCAC
AP005672.1/42864-43050       AAUAACCAA-AUAUAACA-CCAGGACUAAGAG---UAAGAUU----UGUAAUUUUUCUUA----------CGUCACC--UCC-UC----C-AG------GAGCCCA---AG-------------UA---------UCAUAUAUUCCG-CCAA--AAUA----------UAAGGCUUUAAAUACUAA-AA-GGAA-AGCGC
AY876207.1/499-313           GAUAUCCAA-AAAUUAUU-AAUGGAUUUAAGG---UUGGAUU----AGUGAUAUAACGUA----------CAUCUCC--UCC-GC----C-CG------GAGCCCA---AG-------------UA---------UCAUAAACUCCA-CCUA--UAAA----------CAUUGCUUUUACUACUAG-UA-AAAA-CGCUC
AF166114.1/1991-1805         AAUAACCAA-AGAUAACU-GCUGGACUAAGUG---UUGGAUC----UGUAAUGAUUCUUA----------CAUCUCC--UCC-GC----C-UG------GAGCCCA---UG-------------UA---------UCAUAUACACCA-CCAA--AAUA----------GCAUGCUUUCCAUACUAA-UA-AAUA-UGCAC
DQ291132.1/126619-126433     AGUAACCAA-AGAUUACA-CCAGGGUUUGUAG---UUGGGUU----UGAAAUGAUACGAA----------CGUCACC--ACC-AC----C-GG------CAGCCCA---AG-------------UA---------UCGUAAACACCA-CCGA--AGUA----------CAUAGCUUUCCAAACUAA-UA-ACCA-AGCAC
AF481847.1/506-320           GAUAGCUAA-AUAUAACA-CUAGGAUUAAGAG---UUAGAUU----GGUAAUUUUUCUUA----------CAUCUCC--UCC-UC----C-CG------GUGCCCA---AG-------------UA---------UCAUAAAUACCU-CCAA--ACCA----------AAUUGCUUUUGCUACUAA-UA-AUAA-AGCAC
DQ396875.1/676-862           AGUAACCAA-AAACAACA-GCAGCAUUUGUAG---UUGGGUU----UGUAAUAAUACGAA----------CGUCUCC--ACC-UC----C-UG------GAGCCCA---UG-------------UA---------UCAUAAACACCA-CCAA--AAUA----------CAUAGCUUUCCAUACUAA-UA-ACCA-AGCUC
AB044527.1/373-187           GGUAAUUAA-AAAUUACA-CCAGCAUUUGUUG---UUGGGUU----UGUAAUAACACGAA----------CGUCACC--ACC-AC----C-UG------GAGCCCA---AG-------------UG---------UCAUAAACACCG-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-UGCAC
U30821.1/99448-99262         UAUAACUAA-AAAUUACU-GUUGGGUUUAAUG---UUGGAUU----ACUAAUUACACGUA----------CAUCUCC--ACC-GC----C-UG------GUGCCCA---AG-------------UG---------UCAUAAACACCA-CCGA--AGAA----------CAUUGCUUUUAAUACUAA-AA-GUAA-AGCAC
AB044525.1/373-187           GGUAGCCAA-AAAUAACG-GCUGCGUUUGUUG---UUGGGUU----UGUAAUAACACGGAUAUCUCCCC-CUCCAG-----------------------GGGCCCA---AG-------------UG---------UCGUAAACACCA-CCAA--AAUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AY958085.1/116464-116278     GAUAGCCAA-AAAUAACA-CCAGGAUUUAAAG---UUAAAUU----UGUUAUUUUACGUA----------CAUCUCC--ACC-AC----C-AG------GUGCCCA---AG-------------UA---------UCAUAAACACCA-CCGA--ACCA----------UACAGCUUUAAACACUAG-UA-AGAA-AGCAC
CP000393.1/817039-816853     GAUAACCAA-AUAUAACA-GCAGGAUUCAAAG---UAGGGUU----AGUAAUUACUCGUA----------CAUCACC--GCC-AC----C-UG------GUGCCCA---AG-------------UA---------UCAUAGACACCA-CCCA--AGAA----------CACAGCUUUGAUUACUAA-UA-AGAA-UGCGC
AY876203.1/499-313           GAUAGCCAA-AAAUUACA-GCUGGAUUUAAAG---UAGGAUU----ACUAAUAAAACGUA----------CAUCGCC--ACC-AC----C-UG------GAGCCCA---UG-------------UA---------UCAUAUAUACCA-CCAC--UAAA----------UAAAGCUUUAAUAACAAG-UA-AAAA-UGCGC
AB044530.1/373-187           GGUAACCGA-AGAUAACA-GCAGCGUUUGUAG---UUGGGUU----AGUAAUAACACGAA----------CGUCACC--ACC-AC----C-UG------GAGCCCA---AG-------------UG---------UCAUAAACACCA-CCGA--AGUA----------CAUUGCUUUCCAAACUAG-UA-ACCA-UGCAC
AF481841.1/506-320           GAUAACCAA-AGAUAACU-CCUGGACUAACAG---UAAUAUU----AGUAAUUUUUCUUA----------CAUCACC--ACC-AC----C-AG------GUGCCCA---UG-------------UA---------UCAUAUACACCA-CCAA--ACCA----------UAUAGCUUUAGCUACUAA-UA-AUAA-AGCGC
X04465.1/40500-40314         AAUAACCAA-AGAUUACA-CCUGGACUAAGAG---UUAAAUU----UGUAAUUUUUCUUA----------CAUCUCC--ACC-AC----C-UG------GAGCCCA---UG-------------UA---------UCAUAAAUACCA-CCAA--AAUA----------UAAGGCUUUAAAUACUAA-AA-GAAA-AGCAC
AF481837.1/506-320           GAUAGCCAA-AGAUAAUA-CUUGGAUCAUAUG---UAGGAUU----AGUUAUUACUCGAA----------CAUCUCC--UCC-AC----C-AG------GAGCCCA---AG-------------UA---------UCGUAAACACCU-CCAA--ACCA----------UACAGCUUUAGCUACUAA-UA-AUAA-UGCAC
AB044522.1/373-187           GGUAACCAA-AAAUUACA-GCAGCGUUUGUUG---UUGGGUU----UGUAAUAACACGAA----------CGUCACC--ACC-CC----C-UG------GCGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AAUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB086178.1/373-187           GAUAACCAA-AAAUUACA-GCUGCGUUUGUUG---UUGGGUU----AGUAAUUAUACGGAUGUCACCAC-CACCUG-----------------------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCGC
AB076171.2/473-287           GGUAACCAA-AAAUUACA-GCAGCAUUUGUUG---UUGGGUU----AGUAAUAACACGAA----------CGUCUCC--UCC-CC----C-UG------GUGCCCA---AG-------------UA---------UCGUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-UGCAC
AB044480.1/373-187           GGUAACCAA-AAAUCACA-GCUGCAUUUGUUG---UUGGGUU----AGUAAUAACACGAAUGUCACCAC-CACCUG-----------------------GAGCCCA---UG-------------UG---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AF481846.1/506-320           AAUAACCAA-AAAUAACA-CUAGGAUUUAGUG---UUAAGUU----AGUAAUUUUUCUAA----------CAUCUCC--UCC-UC----C-UG------GAGCCCA---AG-------------UA---------UCGUAUACACCA-CCAA--AAUA----------AAGAGCUUUUAAUACUAA-UA-AAAA-AGCUC
AB044497.1/373-187           GGUAACCAA-AAAUUACA-GCUGCGUUUGUUG---UUGGGUU----AGUAAUAACACGAA----------CGUCACC--ACC-AC----C-AG------GAGCCCA---AG-------------UA---------UCGUAAACACCA-CCAA--AGUA----------UAAAGCUUUCCAAACAAG-UA-ACCA-UGCAC
AB044504.1/373-187           GAUAACCAA-AAAUUACA-GCAGCAUUUGUUG---UUGGAUU----AGUAAUUACACGUA----------CGUCUC-----------------------CGCCGCC---GGGAGCCCAAG----UA---------UCAUAAAUACCG-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-GA-GCCA-CGCGC
X62578.1/2940-2754           GAUAGCCAA-AAAUUACU-AAUGGAUUUAGGG---UUGGAUU----AUUGAUAUAACGUA----------CAUCACC--UCC-AC----C-AG------GUGCCCA---UG-------------UG---------UCAUAAACUCCC-CCAA--AAAA----------CAUAGCUUUUAUAACUAG-CA-AGAA-AGCUC
AB044528.1/373-187           GGUAACCAA-AAAUAACA-GCAGCAUUUGUUG---UUGGGUU----AGUAAUAACACGAA----------CGUCACC--ACC-AC----C-UG------GAGCCCA---AG-------------UA---------UCGUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-UGCAC
AB044505.1/373-187           GGUAACCAA-AGAUAACU-GCAGCAUUUGUUG---UUGGGUU----UGUAAUAACACGAA----------UGUCUCC--GCC-AC----C-UG------GCGCCCA---UG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044521.1/373-187           GGUAACCAA-AAAUAACA-GCAGCAUUUGUUG---UUGGAUU----AGUAAUAACACGAA----------CGUCAC-----------------------CACCACC---UGGUGCCCAAG----UA---------UCGUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB214423.1/373-187           GAUAACCAA-AAAUUACA-GCUGCGUUUGUUG---UUGGGUU----AGUAAUAACACGGAUGUCGCCGC-CACCUG-----------------------GAGCCCA---AG-------------UA---------UCAUAAACACCG-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044477.1/373-187           GGUAACCAA-AAAUAACA-GCAGCGUUUGUUG---UUGGAUU----AGUAAUAACACGAA----------CAUCACC--ACC-AC----C-AG------GCGCCCA---AG-------------UA---------UCAUAAACACCA-CCGA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCCC
AB044524.1/373-187           GGUAACCAA-AAAUUACA-GCAGCAUUUGUUG---UUGGAUU----AGUAAUAACACGAA----------CGUCUC-----------------------CACCGCC---CG-------------GGGCCCAAGUAUCGUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACUAG-UA-ACCA-UGCAC
AB214434.1/373-187           GAUAACCAA-AAAUUACA-GCUGCGUUGGUUG---UUGGAUU----AGUAAUGACACGAAUGUCACCAC-CACCUG-----------------------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB214418.1/373-187           GAUAGCCAA-AAAUCACA-GCCGCAUUUGUUG---UUGGGUU----AGUAAUAACACGAAUAUCUCCAC-CACCUG-----------------------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044529.1/373-187           AAUAACCAA-AGAUUACA-GCAGCGUUUGUUG---UUGGGUU----UGUAAUAAUACGAA----------CGUCAC-----------------------CACCACC---UGGUGCCCAAG----UA---------UCAUAAACACCA-CCAA--AAUA----------AAGAGCUUUUAAAACAAG-UA-ACCA-AGCCC
AB044508.1/373-187           GAUAACCAA-AGAUUACA-GCAGCAUUUGUUG---UUGGAUU----UGUAAUUACACGUA----------CAUCAC-----------------------CACCACC---CG-------------GGGCCCAAGUAUCGUAAAUACCU-CCAA--AAUA----------CAUAGCCUUCCAAACAAG-UA-ACCA-GGCAC
AB044509.1/373-187           GAUAACCAA-AGAUUACA-GCAGCACUUGUUG---UUGGAUU----UGUAAUAAUACGAA----------CAUCACC--GCC-UC----C-UG------GUGCCCA---AG-------------UA---------UCAUAAAUACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044501.1/373-187           GGUAACCAA-AAAUUACA-GCUGCAUUUGUUG---UUGGGUU----AGUAAUAACACGAA----------CGUCUC-----------------------CACCACC---GGGCGCCCAUG----UA---------UCGUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044498.1/373-187           GGUAACCAA-AAAUUACA-GCAGCAUUUGUUG---UUGGAUU----AGUGAUAACACGUA----------CGUCUCC--ACC-GC----C-AG------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB214413.1/373-187           GAUAACCAA-AAAUUACC-GCUGCGUUUGUUG---UUGGGUU----AGUAAUCAUACGAAUGUCACCAC-CACCAG-----------------------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044510.1/373-187           GGUAACCAA-AGAUAACC-GCUGCGUUUGUUG---UUGGGUU----UGUGAUAACACGAA----------CGUCGCC--ACC-AC----C-AG------GAGCCCA---UG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044499.1/373-187           GGUAACCAA-AAAUAACA-GCAGCAUUUGUUG---UUGGAUU----AGUAAUUACACGAA----------CGUCUCC--ACC-AC----C-UG------GAGCCCA---UG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044496.1/373-187           GGUAACCAA-AAAUUACA-GCAGCAUUUGUUG---UUGGUUU----AGUAAUAACACGAA----------CGUCUCC--ACC-AC----C-UG------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-UGCAC
AB044494.1/373-187           GAUAACCAA-AAAUUACA-GCUGCGUUUGUUG---UUGGGUU----AGUAAUAACACGAA----------CGUCACC--ACC-AC----C-AG------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044486.1/373-187           GAUAACCAA-AAAUUACA-GCAGCGUUUGUAG---UAGGGUU----AGUAAUAAUACGAA----------CAUCACC--ACC-AC----C-AG------GAGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AGUA----------CAUAGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044512.1/373-187           GAUAACCAA-AGAUUACA-GCAGCAUUUGUUG---UUGGGUU----AGUAAUAACACGUA----------CGUCACC--ACC-AC----C-UG------GAGCCCA---UG-------------UA---------UCGUAAAUACCA-CCAA--AGUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
AB044520.1/373-187           GAUAACCAA-AAAUUACA-GCAGCAUUUGUUG---UUGGGUU----AGUAAUAACACGAAUAUCACCAC-CACCAG-----------------------GUGCCCA---AG-------------UA---------UCAUAAACACCA-CCAA--AAUA----------CAUUGCUUUCCAAACAAG-UA-ACCA-AGCAC
EU262890.1/30623-30809       AAUAACCAA-AUAGAAUA-CUUGGGCUAAGGG---UCAAGUU----AGUAAUUUUUCGUA----------CAUCUCC--CCC-UC----C-CG------GAGCCCA---GG-------------UA---------UCAUAUACGCCA-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
CP001037.1/4582747-4582933   CAUAACCGA-AGAUAACU-GCUGGGUUCAAUG---UGGGAUU----GGUAAUAAUCCGAA----------CGUCACC--ACC-GC----C-UG------GUGCCCA---GG-------------UG---------UCAUACAACCCA-CCGA--AGAA----------CAUUGCUUUUGCUACCAA-UA-GCAG-CGCAC
BX548175.1/1271393-1271207   CGUAUCCAA-AGAUCACG-CCUGGAUCAAGUG---UGGGGCU----GGUGAUUAAUCUCA----------CGUCGCC--ACC-AC----C-UG------GAGCCCA---GG-------------UG---------UCAUAGAUGCCG-CCAA--AGAA----------GCAGGCCUUGAGGAUCAG-AG-CAAG-AGCUC
DQ424856.1/37749-37563       AAUAACCAA-AUAUAACA-CUUGGG-CUAAGGGU-CAA-GUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACGCCG-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
AM447437.2/1214-1028         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------CAUCUCC--CCC-UC----C-GG------GAGCCCA---GG-------------UA---------UCAUAUACGCCG-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AGCAC
FN596039.1/7655-7475         AAUAACCAA-AUAUAACA-CUUGGGCUAAGGG---UCAAGUU----GGUAAUUUUUCUUA----------ACCCUC-----------------------CGGGAGCCCAGG-------------UA---------UCAUAUACGCCC-CCAA--AAUA----------AAGAGCCUUGAAUACUAG-AA-GAAA-AACAC
FN596251.1/421135-420959     GUUGGGCAA-A----ACA-UAUGGUUGUUUGG---UUGGUUAAA--UGUUAUUAAUGAGA----------AUUCAUU----------------------GAGCUCG---AG-------------UA---------UCAUAUGCACCG-CCAA--AAUA----------AAAAGUCUUGAAUGCUAA-AA-GAAA-AGUAC
#=GC SS_cons                 :::::::::.::::::::.:::::::::::::...:::::::....::::::::::::::..........:::::::..:::.::....:.::......:::::::...::.............::.........::::::::::::.::::..::::..........::::::::::::::::::.::.::::.:::::
#=GC RF                      aAUAaCCAA.AaAUaACa.cuuGGaUUaAgaG...UuGGgUU....aGUaAUuauuCuuA..........CaUCuCC..aCC.aC....C.uG......GaGCCCA...gG.............UA.........UCAUAuAcaCCa.CCaA..AauA..........cAuaGCUUUgaauACuAG.uA.gaAA.aGCAC

AM423539.2/7314-7144         GUAUAU-CUAACAAGAUU-UAGU-GAA-----UACAA--AAUUAUGAUC-AUCUUA-UUUCUAUUUUUUUU
X97043.1/910-733             CGUAAC-CUAAGGUGAGG-AGGU-GGU---GACCGAG--GAUGUUCCCC-AGUUUG-GCCGCGUCAUCCCA
AARH01011413.1/13675-13504   CUAUAC-CUGGCAAGAUU-AUGU-GAA---CACCUAA--AAUUGUUGUC-AUUUUAAUUUCUAUCUUACCA
AM430133.2/11786-11596       CUAUAC-CUAACAAGAGU-AAGU-GAA----UUUUAA--AAUUGCAGUC-AUUUUA-UUUCUGUCUUUCCA
CP000239.1/2624256-2624432   CCAAUC-CCAGCAGCACC-AGGU-GGA---UCCCUAG--GAUGGUGGUC-AUCUUG-UUUUUGUCUUGCCA
X97043.1/2155-1978           CCAAUC-CGAGCAGCAGC-AGGU-GAU---GACCCAG--AAUUAAGCCC-AGUUGC-UUGGGAUCAUCCCA
BA000045.2/2489488-2489287   CGAUCC-CAAGCAGGAUC-AGGU-GGA---UGCCCAG--GAUGGUGGUC-AUCUUG-UUCUUGUCUUUCCA
AM444593.1/967-773           CUAUACACUAACAAGAUU-AAGUAGAACUAACCCUAA--AAUUGUGGUCUAUUUUA-UUUCUAUCUUYCYA
AJ534947.1/502-328           GGAUCC-CCAACAAUAGG-AGGU-GGU---GACCGAG--GAUGAGGCUG-AGUUGC-UUGGUAUCGCCCCA
AY835431.1/93748-93575       CAAAGC-CUAAAAUAACU-AAAU-GAA---UACCUAA--AAUUGUAGAC-AUUUUG-UUUUUAUCUUUCCA
AJ311688.1/541-367           CCGCCC-CCAAAAACAGU-AGGU-GAU---GACCGAG--AAUCAUUCCU-AAUUGG-GCCGGAUUUUCCCA
AP004950.1/14873-14693       CUAUAC-CUAACAAGAUU-AAGU-GAA---UACCCAA--AAGUGUAGUC-AUUUUA-UUACG--CCCUGAG
CP000240.1/2372203-2372380   CCAGCC-CCAGCAGCAGC-AGGU-GGA---UGCCGAG--GAUGGUGGUC-AUCUUG-UCGUCAUCUUCCCA
CP000239.1/2622597-2622774   CCAGCC-CCAGCAGCAGC-AGGU-GGA---UCCCCAG--GAUGGUGGUC-AUCUUG-UCGUCGUCUUCCCA
AJ311687.1/555-378           CUACAC-CCACAAACACA-ACAC-CCU---CCCCCAA--AAUUAAGCCC-AGCUGU-UUGGGCUCAUCCCA
DQ630521.1/24745-24575       CAAAAC-CUAAAAUAAUU-AGGU-GGA---AACCUAA--AAUGCUUGUC-AUUUUG-UUCUUGUCUUUCCA
AASG02000597.1/43226-43418   CUAUGC-CUAGCAAGAUU-AAGU-GAA---UAACUAAAAAAUUAUUAUC-AUUUUA-UUUCUAUUUUUUUA
AY552464.1/3103-2929         CUACUC-CUAAGAAAAUG-AGGU-GAU---GACCGAA--AAUAAAGGUU-AACUUG-UUGCCAUCAGACCA
AJ311691.1/541-367           CCGCUC-CUAAAAACAGC-AAAU-GGU---GCCCUAA--GAUCAUCCCC-AAUUGC-UUGGGGUCGCCCCA
AY552464.1/1859-1685         CCAACC-CAAGAAGAAUU-AAGU-GGU---GACCAAG--GAUAAAACCU-AGACGU-UUACCAUCACCCCA
AASG02001249.1/17499-17692   CUAUAC-CUAGCAAGAUU-AAGU-GAA---UACCUAU--AUAUAUAUAU-AUAUAU-AUAUAUAUAAGCCU
AB044481.1/354-187           CUAGAC-CUAAAAUGAUU-AAGU-GGU---AACCUAA--AAUGUUUGUC-AUUUUG-UUUUUGUCUUUCCA
AADV02000296.1/863-689       CAAUGC-CUAAUAGGACU-AAGU-GAA---UCCCUAA--AAUACUGGUC-AUUUUU-UUGCCAUCUUGCCA
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#=GC SS_cons                 ::::::.:::::::::::.:<<<.<<<...--<<<<<..__________.______.>>>>>>>>>>>:::
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//
