INFERNAL1/a [1.1.5 | Sep 2023] NAME sR60 ACC RF01309 DESC Small nucleolar RNA sR60 STATES 169 NODES 55 CLEN 55 W 71 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 00:03:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/updates/WK_links/testRF01309/RF01309/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.496094 CKSUM 1310913710 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 63.00 NC 44.30 EFP7GF -11.0307 0.71906 ECMLC 0.69828 -7.09901 1.97535 1600000 677759 0.001771 ECMGC 0.41046 -21.78968 -6.69511 1600000 196269 0.002038 ECMLI 0.69196 -5.56953 3.20291 1600000 519307 0.002311 ECMGI 0.41588 -17.81783 -3.87196 1600000 132086 0.003028 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 91 -7.163 -7.370 -0.046 -5.784 IL 1 1 2 1 4 1 16 75 95 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 5 1 16 71 91 -7.270 -0.034 -7.086 -7.298 -8.190 -1.036 1.044 -1.868 0.234 D 4 2 3 5 5 0 10 70 90 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 1 14 72 92 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 55 G C - - MP 6 5 3 10 6 2 16 70 90 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -5.137 -3.285 -5.284 -0.070 -5.787 -4.844 -1.053 -5.547 -4.576 3.720 -4.887 -1.002 -1.429 -4.724 -3.113 -4.155 ML 7 5 3 10 6 1 12 69 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 10 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 7 67 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 13 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 13 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 54 G C - - MP 12 11 6 16 4 2 14 68 88 -7.163 -7.370 -0.046 -5.784 -5.137 -3.285 -5.284 -0.070 -5.787 -4.844 -1.053 -5.547 -4.576 3.720 -4.887 -1.002 -1.429 -4.724 -3.113 -4.155 ML 13 11 6 16 4 1 11 68 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 4 1 8 68 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 15 11 6 16 4 0 7 67 87 -4.568 -4.250 -2.265 -0.520 IL 16 16 5 16 4 1 12 70 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 17 17 6 17 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 18 17 6 20 3 1 12 66 86 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 19 17 6 20 3 0 6 64 85 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 21 20 3 23 3 1 12 65 85 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 22 20 3 23 3 0 6 63 83 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 24 23 3 26 3 1 11 64 84 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 25 23 3 26 3 0 5 62 82 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 27 26 3 29 3 1 10 63 83 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 28 26 3 29 3 0 4 61 81 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 30 29 3 32 3 1 10 62 82 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 31 29 3 32 3 0 3 60 80 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 33 32 3 35 3 1 9 61 81 -8.165 -0.018 -6.819 -0.665 -1.406 1.049 -0.115 D 34 32 3 35 3 0 3 59 79 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 36 35 3 38 3 1 8 60 79 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 37 35 3 38 3 0 2 58 78 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 39 38 3 41 3 1 7 59 78 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 40 38 3 41 3 0 1 57 77 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 42 41 3 44 3 1 7 58 77 -8.165 -0.018 -6.819 0.035 -1.868 1.197 -1.288 D 43 41 3 44 3 0 0 56 76 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 45 44 3 47 3 1 6 57 76 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 46 44 3 47 3 0 0 55 75 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 48 47 3 50 3 1 6 56 75 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 49 47 3 50 3 0 0 54 74 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 4 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 51 50 3 53 3 1 5 54 74 -8.165 -0.018 -6.819 -2.235 1.734 -3.067 -1.550 D 52 50 3 53 3 0 0 53 73 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 54 53 3 56 3 1 4 53 73 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 55 53 3 56 3 0 0 52 72 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 3 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - G - - - ML 57 56 3 59 3 1 4 52 72 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 58 56 3 59 3 0 0 51 71 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 60 59 3 62 3 1 3 51 71 -8.165 -0.018 -6.819 -2.235 1.734 -3.067 -1.550 D 61 59 3 62 3 0 0 50 70 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 63 62 3 65 3 1 3 50 70 -8.165 -0.018 -6.819 -2.235 1.734 -3.067 -1.550 D 64 62 3 65 3 0 0 49 69 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 66 65 3 68 3 1 3 49 69 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 67 65 3 68 3 0 0 48 68 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 69 68 3 71 3 1 2 48 68 -8.165 -0.018 -6.819 1.072 -1.145 -1.239 0.031 D 70 68 3 71 3 0 0 47 66 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - a - - - ML 72 71 3 74 3 1 2 47 67 -8.165 -0.018 -6.819 0.723 -1.586 0.602 -1.006 D 73 71 3 74 3 0 0 46 65 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 75 74 3 77 3 1 1 46 66 -8.165 -0.018 -6.819 -0.665 -1.406 1.049 -0.115 D 76 74 3 77 3 0 0 45 64 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 78 77 3 80 3 1 1 45 64 -8.165 -0.018 -6.819 -2.235 1.734 -3.067 -1.550 D 79 77 3 80 3 0 0 44 63 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 81 80 3 83 3 1 1 44 63 -8.165 -0.018 -6.819 -0.963 -0.071 -1.728 1.159 D 82 80 3 83 3 0 0 43 62 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 84 83 3 86 3 1 1 43 62 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 85 83 3 86 3 0 0 42 61 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 87 86 3 89 3 1 1 42 61 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 88 86 3 89 3 0 0 40 60 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 90 89 3 92 3 1 1 41 60 -8.165 -0.018 -6.819 0.035 -1.868 1.197 -1.288 D 91 89 3 92 3 0 0 39 59 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - g - - - ML 93 92 3 95 3 1 1 40 59 -8.165 -0.018 -6.819 0.189 -0.333 0.389 -0.403 D 94 92 3 95 3 0 0 38 58 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - u - - - ML 96 95 3 98 3 1 1 39 58 -8.165 -0.018 -6.819 -0.873 0.479 -1.667 0.803 D 97 95 3 98 3 0 0 37 57 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - a - - - ML 99 98 3 101 3 1 1 38 57 -8.165 -0.018 -6.819 0.723 -1.586 0.602 -1.006 D 100 98 3 101 3 0 0 36 56 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 102 101 3 104 3 1 1 36 56 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 103 101 3 104 3 0 0 35 55 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - G - - - ML 105 104 3 107 3 1 1 35 55 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 106 104 3 107 3 0 0 34 53 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 108 107 3 110 3 1 1 34 53 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 109 107 3 110 3 0 0 33 52 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 111 110 3 113 3 1 1 33 52 -8.165 -0.018 -6.819 -0.963 -0.071 -1.728 1.159 D 112 110 3 113 3 0 0 32 51 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - G - - - ML 114 113 3 116 3 1 1 32 51 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 115 113 3 116 3 0 0 31 50 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 117 116 3 119 3 1 1 31 50 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 118 116 3 119 3 0 0 30 49 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - G - - - ML 120 119 3 122 3 1 1 30 49 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 121 119 3 122 3 0 0 29 48 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - G - - - ML 123 122 3 125 3 1 1 29 48 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 124 122 3 125 3 0 0 28 47 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - G - - - ML 126 125 3 128 3 1 1 28 47 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 127 125 3 128 3 0 0 27 46 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - A - - - ML 129 128 3 131 3 1 1 27 46 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 130 128 3 131 3 0 0 26 45 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - G - - - ML 132 131 3 134 3 1 1 26 44 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 133 131 3 134 3 0 0 25 44 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - U - - - ML 135 134 3 137 3 1 1 24 43 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 136 134 3 137 3 0 0 23 42 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - G - - - ML 138 137 3 140 3 1 1 23 42 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 139 137 3 140 3 0 0 22 41 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - A - - - ML 141 140 3 143 3 1 1 22 41 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 142 140 3 143 3 0 0 21 40 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - C - - - ML 144 143 3 146 3 1 1 21 40 -8.165 -0.018 -6.819 -2.235 1.734 -3.067 -1.550 D 145 143 3 146 3 0 0 20 39 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - G - - - ML 147 146 3 149 3 1 1 20 39 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 148 146 3 149 3 0 0 19 38 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - G - - - ML 150 149 3 152 3 1 1 19 37 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 151 149 3 152 3 0 0 18 37 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - A - - - ML 153 152 3 155 3 1 1 17 36 -8.165 -0.018 -6.819 1.794 -2.779 -2.371 -2.363 D 154 152 3 155 3 0 0 17 36 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - C - - - ML 156 155 3 158 3 1 1 16 35 -8.165 -0.018 -6.819 -2.235 1.734 -3.067 -1.550 D 157 155 3 158 3 0 0 16 34 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - U - - - ML 159 158 3 161 3 1 1 15 33 -8.165 -0.018 -6.819 -1.865 -1.796 -2.616 1.711 D 160 158 3 161 3 0 0 15 33 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - G - - - ML 162 161 3 164 3 1 1 13 31 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.673 D 163 161 3 164 3 0 0 13 32 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - A - - - ML 165 164 3 167 2 1 1 1 1 * 0.000 1.794 -2.779 -2.371 -2.363 D 166 164 3 167 2 0 0 0 0 * 0.000 IL 167 167 3 167 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 54 ] - - - - - - E 168 167 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR60 ACC RF01309 DESC Small nucleolar RNA sR60 LENG 55 MAXL 135 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 00:03:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/updates/WK_links/testRF01309/RF01309/CM NSEQ 4 EFFN 2.582031 CKSUM 1310913710 STATS LOCAL MSV -8.4769 0.71906 STATS LOCAL VITERBI -8.5176 0.71906 STATS LOCAL FORWARD -3.8167 0.71906 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.34262 1.66389 1.05233 1.60785 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 0.00000 * 1 2.12491 0.65306 2.70449 1.22690 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 2 2.66287 3.36018 0.15238 3.30070 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 3 2.66131 3.35825 0.15270 3.29803 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 4 2.81576 3.70895 0.12993 3.28395 4 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 5 0.13713 3.35241 3.06551 3.06801 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 6 2.71655 2.66250 3.23805 0.19251 6 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 7 2.81576 3.70895 0.12993 3.28395 7 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 8 0.13713 3.35241 3.06551 3.06801 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 9 1.86338 2.37847 0.64927 1.47084 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 10 2.81576 3.70895 0.12993 3.28395 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 11 0.13713 3.35241 3.06551 3.06801 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 12 1.36594 2.70331 0.54832 2.30302 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 13 2.71655 2.66250 3.23805 0.19251 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 14 2.71655 2.66250 3.23805 0.19251 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 15 2.98350 0.17575 3.55959 2.49972 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 16 0.13713 3.35241 3.06551 3.06801 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 17 2.81576 3.70895 0.12993 3.28395 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 18 2.98350 0.17575 3.55959 2.49972 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 19 2.98350 0.17575 3.55959 2.49972 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 20 2.71655 2.66250 3.23805 0.19251 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 21 0.63715 2.19212 2.25837 1.36648 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 22 0.88102 2.50505 0.96247 2.10357 22 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 23 1.86338 2.37847 0.64927 1.47084 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 24 2.98350 0.17575 3.55959 2.49972 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 25 2.07306 1.43483 2.60416 0.57611 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 26 2.81576 3.70895 0.12993 3.28395 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 27 0.13713 3.35241 3.06551 3.06801 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 28 1.36594 2.70331 0.54832 2.30302 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 29 1.25742 1.61577 1.10978 1.67535 29 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 30 2.00820 1.04744 2.56074 0.82625 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 31 0.88102 2.50505 0.96247 2.10357 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 32 2.71655 2.66250 3.23805 0.19251 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 33 2.81576 3.70895 0.12993 3.28395 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 34 0.13713 3.35241 3.06551 3.06801 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 35 2.07306 1.43483 2.60416 0.57611 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 36 2.81576 3.70895 0.12993 3.28395 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 37 0.13713 3.35241 3.06551 3.06801 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 38 2.81576 3.70895 0.12993 3.28395 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 39 2.81576 3.70895 0.12993 3.28395 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 40 2.81576 3.70895 0.12993 3.28395 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 41 0.13713 3.35241 3.06551 3.06801 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 42 2.81576 3.70895 0.12993 3.28395 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 43 2.71655 2.66250 3.23805 0.19251 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 44 2.81576 3.70895 0.12993 3.28395 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 45 0.13713 3.35241 3.06551 3.06801 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 46 2.98350 0.17575 3.55959 2.49972 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 47 2.81576 3.70895 0.12993 3.28395 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 48 2.81576 3.70895 0.12993 3.28395 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 49 0.13713 3.35241 3.06551 3.06801 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 50 2.98350 0.17575 3.55959 2.49972 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 51 2.71655 2.66250 3.23805 0.19251 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 52 2.81576 3.70895 0.12993 3.28395 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 53 0.13713 3.35241 3.06551 3.06801 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 54 3.49353 0.18185 3.19289 2.35569 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 55 3.49281 0.18191 3.19256 2.35555 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.01837 4.00634 * 1.46634 0.26236 0.00000 * //