INFERNAL1/a [1.1.4 | Dec 2020] NAME sR52 ACC RF01306 DESC Small nucleolar RNA sR52 STATES 181 NODES 57 CLEN 59 W 76 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:12:19 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.972656 CKSUM 2172736931 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 53.20 NC 41.30 EFP7GF -4.9010 0.72792 ECMLC 0.53779 -12.91601 -0.11494 1600000 1172188 0.001024 ECMGC 0.36466 -23.86244 -6.12201 1600000 258000 0.001550 ECMLI 0.57321 -10.00812 1.05096 1600000 679560 0.001766 ECMGI 0.40383 -17.88407 -2.79529 1600000 177140 0.002258 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 76 96 -6.966 -7.173 -0.053 -5.587 IL 1 1 2 1 4 1 20 79 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 19 76 96 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 4 2 3 5 3 0 14 74 94 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 19 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 18 75 95 -7.981 -0.020 -6.635 0.702 -1.412 0.518 -0.824 D 7 5 3 8 3 0 13 73 93 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 18 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 18 74 94 -7.981 -0.020 -6.635 0.702 -1.412 0.518 -0.824 D 10 8 3 11 3 0 12 72 92 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 17 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 17 73 93 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 13 11 3 14 3 0 12 71 91 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 16 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 16 71 91 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 16 14 3 17 3 0 11 70 90 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 15 70 90 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 19 17 3 20 3 0 10 69 89 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 15 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 14 69 89 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 22 20 3 23 3 0 9 68 88 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 14 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 13 68 88 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 25 23 3 26 3 0 9 67 87 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 13 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 13 67 87 -7.981 -0.020 -6.635 -1.516 -1.507 -2.251 1.627 D 28 26 3 29 3 0 8 66 86 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 12 66 86 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 31 29 3 32 3 0 7 65 85 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 11 65 85 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 34 32 3 35 3 0 6 64 84 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 11 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 10 64 84 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 37 35 3 38 3 0 6 63 83 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 39 38 3 41 3 1 9 63 83 -7.981 -0.020 -6.635 0.702 -1.412 0.518 -0.824 D 40 38 3 41 3 0 5 62 82 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 8 62 82 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 43 41 3 44 3 0 4 61 80 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 7 61 81 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 46 44 3 47 3 0 3 60 79 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - a - - - ML 48 47 3 50 3 1 6 60 80 -7.981 -0.020 -6.635 0.718 -1.409 0.498 -0.822 D 49 47 3 50 3 0 3 59 78 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 1 5 59 79 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 52 50 3 53 3 0 2 57 77 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 5 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 5 58 77 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 55 53 3 56 3 0 2 56 76 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 4 57 76 -7.981 -0.452 -1.915 -1.616 -2.841 1.732 -2.228 D 58 56 3 59 3 0 1 56 75 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 60 59 3 62 3 1 5 56 76 -7.556 -0.027 -6.210 -0.778 -0.911 -1.462 1.334 D 61 59 3 62 3 0 1 54 74 -7.933 -3.446 -0.145 IL 62 62 3 62 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 5 55 74 -7.556 -0.027 -6.210 -0.778 -0.911 -1.462 1.334 D 64 62 3 65 3 0 0 54 73 -7.933 -0.329 -2.325 IL 65 65 3 65 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - a - - - ML 66 65 3 68 3 1 4 54 73 -7.981 -0.020 -6.635 0.619 0.272 -1.124 -0.327 D 67 65 3 68 3 0 0 52 72 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 2 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - A - - - ML 69 68 3 71 3 1 4 53 72 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 70 68 3 71 3 0 0 51 71 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 72 71 3 74 3 1 3 52 71 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 73 71 3 74 3 0 0 50 70 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 75 74 3 77 3 1 3 51 70 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 76 74 3 77 3 0 0 49 69 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 2 50 69 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 79 77 3 80 3 0 0 48 68 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - G - - - ML 81 80 3 83 3 1 2 48 68 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 82 80 3 83 3 0 0 47 67 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - C - - - ML 84 83 3 86 3 1 2 47 67 -7.981 -0.020 -6.635 -1.781 1.635 -2.606 -1.187 D 85 83 3 86 3 0 0 46 66 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 87 86 3 89 3 1 1 46 66 -7.981 -0.020 -6.635 -1.516 -1.507 -2.251 1.627 D 88 86 3 89 3 0 0 45 64 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 90 89 3 92 3 1 1 45 64 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 91 89 3 92 3 0 0 44 63 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 93 92 3 95 3 1 1 44 63 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 94 92 3 95 3 0 0 43 62 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - A - - - ML 96 95 3 98 3 1 1 43 62 -1.949 -0.452 -6.635 1.726 -2.405 -2.033 -1.950 D 97 95 3 98 3 0 0 41 60 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 43 62 -2.119 -0.445 -4.819 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - A - - - ML 99 98 3 101 3 1 1 41 60 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 100 98 3 101 3 0 0 40 59 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - G - - - ML 102 101 3 104 3 1 1 40 59 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 103 101 3 104 3 0 0 39 58 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - a - - - ML 105 104 3 107 3 1 1 39 58 -7.981 -0.020 -6.635 0.702 -1.412 0.518 -0.824 D 106 104 3 107 3 0 0 38 57 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - U - - - ML 108 107 3 110 3 1 1 38 57 -7.981 -0.020 -6.635 -1.516 -1.507 -2.251 1.627 D 109 107 3 110 3 0 0 37 56 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 111 110 3 113 3 1 1 37 56 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 112 110 3 113 3 0 0 36 55 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - A - - - ML 114 113 3 116 3 1 1 36 55 -7.981 -0.020 -6.635 1.726 -2.405 -2.033 -1.950 D 115 113 3 116 3 0 0 35 54 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - U - - - ML 117 116 3 119 3 1 1 35 54 -7.981 -0.020 -6.635 -1.516 -1.507 -2.251 1.627 D 118 116 3 119 3 0 0 34 53 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - G - - - ML 120 119 3 122 3 1 1 34 52 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 121 119 3 122 3 0 0 33 51 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - A - - - ML 123 122 3 125 3 1 1 33 51 -8.370 -0.018 -6.688 1.726 -2.405 -2.033 -1.950 D 124 122 3 125 3 0 0 31 50 -5.620 -0.734 -1.403 IL 125 125 3 125 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 60 - G - - MR 126 125 3 128 3 1 1 32 50 -8.370 -0.018 -6.688 -1.616 -2.841 1.732 -2.228 D 127 125 3 128 3 0 0 30 49 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 59 - U - - MR 129 128 3 131 3 1 1 31 49 -8.370 -0.018 -6.688 -1.516 -1.507 -2.251 1.627 D 130 128 3 131 3 0 0 29 48 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 58 - A - - MR 132 131 3 134 3 1 1 30 48 -8.370 -0.018 -6.688 1.726 -2.405 -2.033 -1.950 D 133 131 3 134 3 0 0 28 47 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 57 - G - - MR 135 134 3 137 3 1 1 29 47 -8.370 -0.018 -6.688 -1.616 -2.841 1.732 -2.228 D 136 134 3 137 3 0 0 27 46 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 56 - U - - MR 138 137 3 140 3 1 1 27 46 -8.370 -0.018 -6.688 -1.516 -1.507 -2.251 1.627 D 139 137 3 140 3 0 0 26 45 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 47 ] - 55 - C - - MR 141 140 3 143 3 1 1 26 45 -8.370 -0.018 -6.688 -1.781 1.635 -2.606 -1.187 D 142 140 3 143 3 0 0 25 44 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 48 ] - 54 - u - - MR 144 143 3 146 5 1 1 25 44 -7.108 -0.039 -6.923 -7.135 -8.027 -0.377 -0.952 0.353 0.522 D 145 143 3 146 5 0 0 24 43 -5.352 -0.707 -2.978 -4.409 -2.404 IR 146 146 3 146 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 43 53 G C - - MP 147 146 3 151 6 2 2 24 43 -9.114 -9.053 -0.021 -7.830 -8.110 -8.505 -4.778 -3.111 -4.880 0.176 -5.283 -4.708 -0.639 -5.126 -4.351 3.647 -4.686 -0.811 -1.023 -4.491 -2.678 -3.756 ML 148 146 3 151 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 3 151 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 3 151 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 44 52 A U - - MP 153 152 6 157 6 2 2 22 41 -9.114 -9.053 -0.021 -7.830 -8.110 -8.505 -3.824 -2.847 -3.841 3.353 -4.195 -5.261 0.107 -3.881 -3.731 1.043 -4.280 -0.318 -0.310 -4.443 -1.834 -2.672 ML 154 152 6 157 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 45 51 G C - - MP 159 158 6 163 6 2 2 20 39 -9.114 -9.053 -0.021 -7.830 -8.110 -8.505 -4.778 -3.111 -4.880 0.176 -5.283 -4.708 -0.639 -5.126 -4.351 3.647 -4.686 -0.811 -1.023 -4.491 -2.678 -3.756 ML 160 158 6 163 6 1 1 20 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 20 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 18 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 20 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 46 50 G C - - MP 165 164 6 169 4 2 2 18 37 -6.966 -7.173 -0.053 -5.587 -4.778 -3.111 -4.880 0.176 -5.283 -4.708 -0.639 -5.126 -4.351 3.647 -4.686 -0.811 -1.023 -4.491 -2.678 -3.756 ML 166 164 6 169 4 1 1 20 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 19 38 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 18 37 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 21 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 47 - G - - - ML 171 170 6 173 3 1 1 15 33 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 172 170 6 173 3 0 0 15 33 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 48 - G - - - ML 174 173 3 176 3 1 1 13 31 -7.981 -0.020 -6.635 -1.616 -2.841 1.732 -2.228 D 175 173 3 176 3 0 0 13 32 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 49 - A - - - ML 177 176 3 179 2 1 1 1 1 * 0.000 1.726 -2.405 -2.033 -1.950 D 178 176 3 179 2 0 0 0 0 * 0.000 IL 179 179 3 179 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 56 ] - - - - - - E 180 179 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME sR52 ACC RF01306 DESC Small nucleolar RNA sR52 LENG 59 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:12:19 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 2 EFFN 1.441406 CKSUM 2172736931 STATS LOCAL MSV -8.1720 0.72792 STATS LOCAL VITERBI -9.3470 0.72792 STATS LOCAL FORWARD -2.9690 0.72792 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.08182 1.92694 1.13250 1.64401 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.18806 2.98382 0.27477 2.55724 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.93038 2.24034 1.08311 1.82864 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.93038 2.24034 1.08311 1.82864 3 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.18806 2.98382 0.27477 2.55724 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.26513 2.75569 2.52814 2.41324 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.18806 2.98382 0.27477 2.55724 6 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.18806 2.98382 0.27477 2.55724 7 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.26513 2.75569 2.52814 2.41324 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.16864 2.21109 2.66233 0.34771 9 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.18806 2.98382 0.27477 2.55724 10 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.26513 2.75569 2.52814 2.41324 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.26513 2.75569 2.52814 2.41324 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.93038 2.24034 1.08311 1.82864 13 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.26513 2.75569 2.52814 2.41324 14 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.26513 2.75569 2.52814 2.41324 15 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.92052 2.23879 1.09575 1.82751 16 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.26513 2.75569 2.52814 2.41324 17 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.26513 2.75569 2.52814 2.41324 18 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.18806 2.98382 0.27477 2.55724 19 G - - : 1.38629 1.38629 1.38629 1.38629 0.33377 3.73767 1.34718 1.46634 0.26236 1.09861 0.40547 20 1.77060 1.89988 2.22882 0.55769 20 U - - : 1.38629 1.38629 1.38629 1.38629 0.06437 3.46827 3.46827 1.46634 0.26236 2.55868 0.08057 21 1.77060 1.89988 2.22882 0.55769 21 U - - : 1.38629 1.38629 1.38629 1.38629 0.06437 3.46827 3.46827 1.46634 0.26236 0.16820 1.86554 22 0.98931 1.25108 2.06970 1.53363 22 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.26513 2.75569 2.52814 2.41324 23 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.26513 2.75569 2.52814 2.41324 24 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.26513 2.75569 2.52814 2.41324 25 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.18806 2.98382 0.27477 2.55724 26 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.18806 2.98382 0.27477 2.55724 27 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.26795 0.36838 2.82457 1.92906 28 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.16864 2.21109 2.66233 0.34771 29 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.18806 2.98382 0.27477 2.55724 30 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.26513 2.75569 2.52814 2.41324 31 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.26513 2.75569 2.52814 2.41324 32 A - - : 1.38629 1.38629 1.38629 1.38629 0.33377 1.34718 3.73767 0.17407 1.83408 1.09861 0.40547 33 0.26513 2.75569 2.52814 2.41324 34 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.18806 2.98382 0.27477 2.55724 35 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.93038 2.24034 1.08311 1.82864 36 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.16864 2.21109 2.66233 0.34771 37 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.18806 2.98382 0.27477 2.55724 38 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.26513 2.75569 2.52814 2.41324 39 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.16864 2.21109 2.66232 0.34771 40 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.18806 2.98382 0.27477 2.55724 41 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.26513 2.75569 2.52814 2.41324 42 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.27715 2.72245 0.27099 2.67240 43 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.59986 2.24131 1.45569 2.19326 44 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.28078 2.72568 0.26979 2.67724 45 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.28104 2.72592 0.26970 2.67760 46 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.18806 2.98382 0.27477 2.55724 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.18806 2.98382 0.27477 2.55724 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.26513 2.75569 2.52814 2.41324 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.90017 0.31399 2.55521 1.98936 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.90152 0.31378 2.55571 1.98962 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.42884 1.69746 2.05939 0.50886 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.90479 0.31329 2.55693 1.99026 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 1.57343 1.96722 1.19343 1.05085 54 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.26795 0.36838 2.82457 1.92906 55 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.16864 2.21109 2.66233 0.34771 56 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.18806 2.98382 0.27477 2.55724 57 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 0.26513 2.75569 2.52814 2.41324 58 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.16864 2.21109 2.66233 0.34771 59 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.18806 2.98382 0.27477 2.55724 60 G - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //