INFERNAL1/a [1.1.4 | Dec 2020] NAME sR51 ACC RF01305 DESC Small nucleolar RNA sR51 STATES 172 NODES 46 CLEN 56 W 71 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:12:17 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 3.160156 CKSUM 2827658805 NULL 0.000 0.000 0.000 0.000 GA 38.00 TC 39.20 NC 35.20 EFP7GF -11.1577 0.71971 ECMLC 0.66197 -5.93836 3.10379 1600000 477201 0.002515 ECMGC 0.40176 -19.32906 -4.94216 1600000 129506 0.003089 ECMLI 0.64904 -4.35262 4.05777 1600000 281749 0.004259 ECMGI 0.42311 -15.12984 -2.38067 1600000 88057 0.004543 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 91 -7.266 -8.511 -0.061 -4.965 IL 1 1 2 1 4 1 18 72 92 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 56 - u - - MR 3 2 3 5 3 1 21 71 91 -8.737 -0.014 -7.055 -0.457 -0.100 -0.284 0.602 D 4 2 3 5 3 0 15 69 89 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 19 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 55 - g - - MR 6 5 3 8 3 1 20 70 90 -8.737 -0.014 -7.055 -0.617 -1.239 0.632 0.459 D 7 5 3 8 3 0 14 68 88 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 18 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 54 - A - - MR 9 8 3 11 3 1 19 69 89 -8.737 -0.014 -7.055 1.848 -3.190 -2.744 -2.817 D 10 8 3 11 3 0 13 67 87 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 18 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 53 - G - - MR 12 11 3 14 3 1 19 68 88 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 13 11 3 14 3 0 13 66 86 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 17 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 52 - U - - MR 15 14 3 17 5 1 18 67 87 -7.453 -0.030 -7.269 -7.481 -8.372 -1.171 -0.064 -1.946 1.226 D 16 14 3 17 5 0 12 66 85 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 15 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 1 51 G C - - MP 18 17 3 22 6 2 18 66 86 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.033 -2.856 -4.040 0.548 -4.505 -4.378 -0.111 -4.480 -4.033 3.331 -4.384 -0.621 -0.413 0.351 -2.037 -3.047 ML 19 17 3 22 6 1 13 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 13 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 9 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 15 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 15 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 2 50 c g - - MP 24 23 6 28 6 2 17 64 84 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -3.099 -3.183 -3.143 0.116 -2.507 -3.824 2.232 -3.099 -3.181 0.190 0.936 -1.529 0.941 -3.345 1.916 -2.219 ML 25 23 6 28 6 1 13 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 11 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 9 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 14 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 14 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 49 c g - - MP 30 29 6 34 4 2 15 62 82 -7.380 -7.587 -0.039 -6.002 -4.388 -4.420 -4.113 -0.655 -2.828 -4.540 2.921 -3.622 -4.147 -0.500 -4.453 -2.474 0.713 -4.455 2.194 -2.996 ML 31 29 6 34 4 1 12 62 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 10 62 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 8 61 81 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 13 64 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 13 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 4 - G - - - ML 36 35 6 38 3 1 13 60 79 -8.370 -0.016 -7.024 -2.413 -3.743 1.857 -3.124 D 37 35 6 38 3 0 8 58 78 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 12 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 5 - A - - - ML 39 38 3 41 3 1 13 59 78 -8.370 -0.016 -7.024 1.848 -3.190 -2.744 -2.817 D 40 38 3 41 3 0 7 57 77 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 12 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 6 - U - - - ML 42 41 3 44 3 1 12 58 77 -8.370 -0.016 -7.024 -2.258 -2.124 -3.021 1.782 D 43 41 3 44 3 0 6 56 76 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 11 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 7 - G - - - ML 45 44 3 47 3 1 11 57 76 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 46 44 3 47 3 0 6 55 75 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 9 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 48 - U - - MR 48 47 3 50 3 1 10 56 75 -8.737 -0.014 -7.055 -2.258 -2.124 -3.021 1.782 D 49 47 3 50 3 0 4 54 73 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 9 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 47 - C - - MR 51 50 3 53 3 1 10 55 74 -8.737 -0.014 -7.055 -2.729 1.810 -3.550 -1.954 D 52 50 3 53 3 0 3 53 72 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 8 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 46 - A - - MR 54 53 3 56 5 1 9 54 73 -7.453 -0.030 -7.269 -7.481 -8.372 1.848 -3.190 -2.744 -2.817 D 55 53 3 56 5 0 3 52 72 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 6 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 8 45 A U - - MP 57 56 3 61 6 2 8 53 72 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.569 -3.428 -4.500 3.669 -5.271 -6.435 -0.917 -4.488 -4.396 0.233 -4.979 -0.799 -1.328 -5.468 -2.854 -3.313 ML 58 56 3 61 6 1 5 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 4 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 1 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 6 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 6 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 44 u a - - MP 63 62 6 67 6 2 7 51 70 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -3.745 -3.806 -3.662 -0.242 1.167 -4.246 1.534 -3.397 -3.692 -0.133 -4.096 -1.981 2.883 -3.923 -0.444 -2.630 ML 64 62 6 67 6 1 4 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 3 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 1 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 5 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 5 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 10 43 G C - - MP 69 68 6 73 4 2 5 49 68 -7.380 -7.587 -0.039 -6.002 -5.528 -3.478 -5.747 -0.350 -6.327 -4.987 -1.496 -6.013 -4.803 3.781 -5.092 -1.219 -1.864 -4.972 -3.583 -4.612 ML 70 68 6 73 4 1 3 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 2 49 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 1 48 67 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 4 50 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 4 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - A - - - ML 75 74 6 77 3 1 3 46 65 -8.370 -0.016 -7.024 1.848 -3.190 -2.744 -2.817 D 76 74 6 77 3 0 0 45 64 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 12 - A - - - ML 78 77 3 80 3 1 2 45 64 -8.370 -0.502 -1.782 1.248 -1.847 -0.078 -1.323 D 79 77 3 80 3 0 0 44 63 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 3 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 13 - u - - - ML 81 80 3 83 3 1 3 44 63 -7.890 -0.022 -6.544 -0.646 0.435 -1.417 0.709 D 82 80 3 83 3 0 0 43 62 -8.334 -0.242 -2.725 IL 83 83 3 83 3 1 2 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 14 - C - - - ML 84 83 3 86 3 1 2 43 62 -8.737 -0.014 -7.055 -2.729 1.810 -3.550 -1.954 D 85 83 3 86 3 0 0 42 61 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 42 - G - - MR 87 86 3 89 3 1 2 42 61 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 88 86 3 89 3 0 0 40 60 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 41 - G - - MR 90 89 3 92 3 1 2 41 60 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 91 89 3 92 3 0 0 40 59 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 40 - G - - MR 93 92 3 95 3 1 1 40 59 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 94 92 3 95 3 0 0 39 58 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 39 - A - - MR 96 95 3 98 5 1 1 39 58 -7.453 -0.030 -7.269 -7.481 -8.372 1.246 -1.846 -0.075 -1.321 D 97 95 3 98 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 15 38 u a - - MP 99 98 3 103 6 2 2 38 57 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -3.445 -3.405 -3.471 0.085 -2.802 -4.195 1.356 -3.378 -3.488 0.236 -3.961 -1.508 2.918 -3.694 -0.585 0.869 ML 100 98 3 103 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 16 37 C G - - MP 105 104 6 109 6 2 2 36 55 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -5.453 -5.434 -4.982 -1.610 -3.532 -5.273 3.756 -4.433 -5.076 -1.468 -5.224 -3.410 -0.128 -5.459 -1.276 -3.891 ML 106 104 6 109 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 17 36 g u - - MP 111 110 6 115 4 2 2 34 53 -7.380 -7.587 -0.039 -6.002 -3.965 -2.711 -4.143 2.154 -5.313 -5.890 -0.895 -4.228 -3.806 0.911 -4.369 2.974 -1.091 -4.883 -2.800 -2.831 ML 112 110 6 115 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 34 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 33 53 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 36 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 18 - C - - - ML 117 116 6 119 3 1 1 32 51 -8.370 -0.016 -7.024 -2.729 1.810 -3.550 -1.954 D 118 116 6 119 3 0 0 31 50 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 19 - U - - - ML 120 119 3 122 3 1 1 31 49 -8.370 -0.293 -2.466 -0.746 -1.157 -0.333 1.112 D 121 119 3 122 3 0 0 30 49 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 20 - u - - - ML 123 122 3 125 3 1 1 30 48 -8.095 -0.019 -6.749 -0.832 0.217 -1.606 0.962 D 124 122 3 125 3 0 0 28 47 -7.817 -0.360 -2.208 IL 125 125 3 125 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 21 - G - - - ML 126 125 3 128 3 1 1 28 47 -8.370 -0.292 -2.471 0.112 -2.043 1.212 -1.478 D 127 125 3 128 3 0 0 27 46 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 22 - U - - - ML 129 128 3 131 3 1 1 27 46 -8.096 -0.019 -6.750 -1.734 -1.687 -2.479 1.682 D 130 128 3 131 3 0 0 26 45 -7.813 -3.326 -0.159 IL 131 131 3 131 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 23 - u - - - ML 132 131 3 134 3 1 1 26 45 -8.478 -0.017 -6.796 0.303 -0.903 -1.185 0.842 D 133 131 3 134 3 0 0 25 44 -6.814 -0.276 -2.597 IL 134 134 3 134 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 35 - A - - MR 135 134 3 137 3 1 1 25 44 -8.737 -0.014 -7.055 1.848 -3.190 -2.744 -2.817 D 136 134 3 137 3 0 0 24 42 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 34 - G - - MR 138 137 3 140 5 1 1 24 43 -7.453 -0.030 -7.269 -7.481 -8.372 -2.413 -3.743 1.857 -3.124 D 139 137 3 140 5 0 0 23 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 24 33 G U - - MP 141 140 3 145 6 2 2 23 42 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.136 -2.800 -4.329 0.761 -5.442 -6.253 -0.976 -4.307 -3.898 0.657 -4.458 3.470 -1.307 -5.280 -2.909 -2.953 ML 142 140 3 145 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 25 32 C G - - MP 147 146 6 151 6 2 2 21 40 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.292 -4.354 -4.069 -0.663 1.222 -4.530 3.226 -3.643 -4.108 -0.540 -4.432 -2.471 0.656 -4.393 -0.574 -2.987 ML 148 146 6 151 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 26 31 U G - - MP 153 152 6 157 4 2 2 19 38 -7.380 -7.587 -0.039 -6.002 -4.898 -4.850 -4.420 -1.119 -2.969 -4.724 1.329 -3.803 -4.470 -1.058 -4.684 -2.834 0.383 -4.904 3.397 -3.306 ML 154 152 6 157 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 27 - G - - - ML 159 158 6 161 3 1 1 16 34 -8.370 -0.016 -7.024 -2.413 -3.743 1.857 -3.124 D 160 158 6 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 28 - A - - - ML 162 161 3 164 3 1 1 14 33 -8.370 -0.016 -7.024 1.848 -3.190 -2.744 -2.817 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 29 - A - - - ML 165 164 3 167 3 1 1 13 31 -8.370 -0.016 -7.024 1.138 -1.280 -1.383 0.006 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 30 - G - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 0.109 -2.045 1.215 -1.480 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME sR51 ACC RF01305 DESC Small nucleolar RNA sR51 LENG 56 MAXL 134 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:12:17 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 4 EFFN 3.707031 CKSUM 2827658805 STATS LOCAL MSV -7.7268 0.71971 STATS LOCAL VITERBI -8.5886 0.71971 STATS LOCAL FORWARD -3.9724 0.71971 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.43400 1.66029 1.09783 1.43563 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 2.33255 2.88121 0.35856 1.90919 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 2.59863 1.14367 1.51173 0.95075 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 3.13617 0.69553 2.94594 0.90340 3 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 3.25196 4.19398 0.08026 3.75764 4 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 0.08539 3.79914 3.47275 3.56037 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 3.14698 3.02321 3.68089 0.12423 6 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 3.25196 4.19398 0.08026 3.75764 7 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 0.17291 3.49499 2.35594 3.39214 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 2.86850 1.10997 2.69531 0.60490 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 2.95584 3.79139 0.10374 3.73229 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 0.08539 3.79914 3.47275 3.56037 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 12 0.49178 2.78922 1.42863 2.43774 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.38958 4.12713 1.18244 1.46634 0.26236 1.09861 0.40547 13 1.89844 1.05366 2.44067 0.88084 13 u - - - 1.38629 1.38629 1.38629 1.38629 0.04653 3.78408 3.78408 1.46634 0.26236 0.10006 2.35161 14 3.51432 0.10509 4.06922 2.93933 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 2.60054 1.79606 2.39610 0.40235 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 3.79308 0.13271 3.63238 2.58627 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 1.21248 3.43201 0.46424 3.17946 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 3.51432 0.10509 4.06922 2.93933 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 1.98787 2.26855 1.61626 0.57819 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.23564 4.12713 1.64088 1.46634 0.26236 1.09861 0.40547 20 2.04384 1.21592 2.58747 0.69550 20 u - - - 1.38629 1.38629 1.38629 1.38629 0.04002 3.93151 3.93151 1.46634 0.26236 0.15396 1.94706 21 1.31819 2.92236 0.51120 2.54081 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.23488 4.12713 1.64399 1.46634 0.26236 1.09861 0.40547 22 2.76245 2.70072 3.28556 0.18358 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93224 3.93224 1.46634 0.26236 2.63755 0.07422 23 1.17274 2.06418 2.26182 0.77784 23 u - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93224 3.93224 1.46634 0.26236 0.15440 1.94440 24 2.19551 3.43340 0.20118 3.25305 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 25 3.13011 0.26503 2.95771 1.98658 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 3.41057 1.86998 3.26496 0.25534 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 3.25196 4.19398 0.08026 3.75764 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 0.08539 3.79914 3.47275 3.56037 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 0.56734 2.34752 2.42303 1.39147 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 30 1.32103 2.92377 0.50962 2.54228 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 2.46261 3.45304 0.17404 3.14938 31 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 1.35360 3.12111 0.44211 2.90213 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 3.47166 2.35812 3.23282 0.18045 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 3.25196 4.19398 0.08026 3.75764 34 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 0.08539 3.79914 3.47275 3.56037 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 3.37666 2.20113 3.21556 0.20453 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 2.87305 3.80512 0.11309 3.57033 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 0.66590 2.58405 1.62888 1.53911 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 0.49300 2.78862 1.42599 2.43688 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 3.25196 4.19398 0.08026 3.75764 40 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 3.25196 4.19398 0.08026 3.75764 41 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 3.25196 4.19398 0.08026 3.75764 42 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 3.91029 0.12459 3.64403 2.64561 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 0.41728 2.86206 1.54619 2.64568 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 3.62984 2.71764 3.30926 0.13822 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 0.08539 3.79914 3.47275 3.56037 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 3.51432 0.10509 4.06922 2.93933 47 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 3.14698 3.02321 3.68089 0.12423 48 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 2.24765 3.10643 0.23012 2.89758 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 50 2.05119 2.61823 0.34632 2.39470 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 51 3.01779 0.27876 2.70500 2.05963 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 52 2.31033 1.42639 2.85333 0.50593 52 U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 53 3.25196 4.19398 0.08026 3.75764 53 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 54 0.08539 3.79914 3.47275 3.56037 54 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 55 1.88519 2.32157 0.90918 1.05778 55 g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 56 1.74891 1.44536 1.57301 0.95984 56 u - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //