INFERNAL1/a [1.1.5 | Sep 2023] NAME sR51 ACC RF01305 DESC Small nucleolar RNA sR51 STATES 172 NODES 46 CLEN 56 W 71 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 02:51:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01305/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 3.160156 CKSUM 2827658805 NULL 0.000 0.000 0.000 0.000 GA 38.00 TC 43.20 NC 35.00 EFP7GF -11.1476 0.71972 ECMLC 0.65924 -5.98292 3.09768 1600000 477526 0.002513 ECMGC 0.40090 -19.37677 -4.95139 1600000 129905 0.003079 ECMLI 0.65025 -4.33983 4.05859 1600000 282413 0.004249 ECMGI 0.42298 -15.14167 -2.38613 1600000 88150 0.004538 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 91 -7.266 -8.511 -0.061 -4.965 IL 1 1 2 1 4 1 18 72 92 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 56 - u - - MR 3 2 3 5 3 1 21 71 91 -8.737 -0.014 -7.055 -0.458 -0.105 -0.290 0.608 D 4 2 3 5 3 0 15 69 89 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 19 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 55 - g - - MR 6 5 3 8 3 1 20 70 90 -8.737 -0.014 -7.055 -0.615 -1.235 0.621 0.469 D 7 5 3 8 3 0 14 68 88 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 18 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 54 - A - - MR 9 8 3 11 3 1 19 69 89 -8.737 -0.014 -7.055 1.848 -3.190 -2.744 -2.817 D 10 8 3 11 3 0 13 67 87 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 18 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 53 - G - - MR 12 11 3 14 3 1 19 68 88 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 13 11 3 14 3 0 13 66 86 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 17 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 52 - U - - MR 15 14 3 17 5 1 18 67 87 -7.453 -0.030 -7.269 -7.481 -8.372 -1.173 -0.071 -1.948 1.230 D 16 14 3 17 5 0 12 66 85 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 15 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 1 51 G C - - MP 18 17 3 22 6 2 18 66 86 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.036 -2.857 -4.043 0.547 -4.509 -4.379 -0.114 -4.483 -4.035 3.333 -4.386 -0.622 -0.416 0.341 -2.040 -3.049 ML 19 17 3 22 6 1 13 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 13 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 9 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 15 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 15 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 2 50 c g - - MP 24 23 6 28 6 2 17 64 84 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -3.099 -3.184 -3.143 0.115 -2.507 -3.824 2.228 -3.100 -3.182 0.189 0.928 -1.530 0.940 -3.346 1.926 -2.219 ML 25 23 6 28 6 1 13 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 11 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 9 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 14 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 14 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 49 c g - - MP 30 29 6 34 4 2 15 62 82 -7.380 -7.587 -0.039 -6.002 -4.390 -4.422 -4.114 -0.657 -2.828 -4.540 2.915 -3.622 -4.148 -0.502 -4.454 -2.477 0.711 -4.456 2.204 -2.997 ML 31 29 6 34 4 1 12 62 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 10 62 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 8 61 81 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 13 64 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 13 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 4 - G - - - ML 36 35 6 38 3 1 13 60 79 -8.370 -0.016 -7.024 -2.413 -3.743 1.857 -3.124 D 37 35 6 38 3 0 8 58 78 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 12 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 5 - A - - - ML 39 38 3 41 3 1 13 59 78 -8.370 -0.016 -7.024 1.848 -3.190 -2.744 -2.817 D 40 38 3 41 3 0 7 57 77 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 12 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 6 - U - - - ML 42 41 3 44 3 1 12 58 77 -8.370 -0.016 -7.024 -2.258 -2.124 -3.021 1.782 D 43 41 3 44 3 0 6 56 76 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 11 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 7 - G - - - ML 45 44 3 47 3 1 11 57 76 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 46 44 3 47 3 0 6 55 75 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 9 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 48 - U - - MR 48 47 3 50 3 1 10 56 75 -8.737 -0.014 -7.055 -2.258 -2.124 -3.021 1.782 D 49 47 3 50 3 0 4 54 73 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 9 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 47 - C - - MR 51 50 3 53 3 1 10 55 74 -8.737 -0.014 -7.055 -2.729 1.810 -3.550 -1.954 D 52 50 3 53 3 0 3 53 72 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 8 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 46 - A - - MR 54 53 3 56 5 1 9 54 73 -7.453 -0.030 -7.269 -7.481 -8.372 1.848 -3.190 -2.744 -2.817 D 55 53 3 56 5 0 3 52 72 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 6 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 8 45 A U - - MP 57 56 3 61 6 2 8 53 72 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.569 -3.428 -4.500 3.669 -5.271 -6.435 -0.917 -4.488 -4.396 0.233 -4.979 -0.799 -1.328 -5.468 -2.854 -3.313 ML 58 56 3 61 6 1 5 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 4 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 1 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 6 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 6 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 44 u a - - MP 63 62 6 67 6 2 7 51 70 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -3.744 -3.806 -3.662 -0.241 1.157 -4.246 1.534 -3.397 -3.692 -0.132 -4.096 -1.980 2.885 -3.923 -0.444 -2.629 ML 64 62 6 67 6 1 4 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 3 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 1 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 5 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 5 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 10 43 G C - - MP 69 68 6 73 4 2 5 49 68 -7.380 -7.587 -0.039 -6.002 -5.528 -3.478 -5.747 -0.350 -6.327 -4.987 -1.496 -6.013 -4.803 3.781 -5.092 -1.219 -1.864 -4.972 -3.583 -4.612 ML 70 68 6 73 4 1 3 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 2 49 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 1 48 67 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 4 50 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 4 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - A - - - ML 75 74 6 77 3 1 3 46 65 -8.370 -0.016 -7.024 1.848 -3.190 -2.744 -2.817 D 76 74 6 77 3 0 0 45 64 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 12 - A - - - ML 78 77 3 80 3 1 2 45 64 -8.370 -0.507 -1.770 1.251 -1.848 -0.086 -1.325 D 79 77 3 80 3 0 0 44 63 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 3 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 13 - u - - - ML 81 80 3 83 3 1 3 44 63 -7.885 -0.022 -6.539 -0.643 0.433 -1.413 0.708 D 82 80 3 83 3 0 0 43 62 -8.343 -0.240 -2.734 IL 83 83 3 83 3 1 2 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 14 - C - - - ML 84 83 3 86 3 1 2 43 62 -8.737 -0.014 -7.055 -2.729 1.810 -3.550 -1.954 D 85 83 3 86 3 0 0 42 61 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 42 - G - - MR 87 86 3 89 3 1 2 42 61 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 88 86 3 89 3 0 0 40 60 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 41 - G - - MR 90 89 3 92 3 1 2 41 60 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 91 89 3 92 3 0 0 40 59 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 40 - G - - MR 93 92 3 95 3 1 1 40 59 -8.737 -0.014 -7.055 -2.413 -3.743 1.857 -3.124 D 94 92 3 95 3 0 0 39 58 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 39 - A - - MR 96 95 3 98 5 1 1 39 58 -7.453 -0.030 -7.269 -7.481 -8.372 1.249 -1.847 -0.082 -1.324 D 97 95 3 98 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 15 38 u a - - MP 99 98 3 103 6 2 2 38 57 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -3.449 -3.409 -3.475 0.081 -2.806 -4.200 1.352 -3.382 -3.492 0.233 -3.965 -1.512 2.924 -3.698 -0.589 0.856 ML 100 98 3 103 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 16 37 C G - - MP 105 104 6 109 6 2 2 36 55 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -5.453 -5.434 -4.982 -1.610 -3.532 -5.273 3.756 -4.433 -5.076 -1.468 -5.224 -3.410 -0.128 -5.459 -1.276 -3.891 ML 106 104 6 109 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 17 36 g u - - MP 111 110 6 115 4 2 2 34 53 -7.380 -7.587 -0.039 -6.002 -3.966 -2.711 -4.144 2.148 -5.315 -5.892 -0.897 -4.228 -3.806 0.910 -4.369 2.978 -1.093 -4.885 -2.802 -2.832 ML 112 110 6 115 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 34 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 33 53 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 36 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 18 - C - - - ML 117 116 6 119 3 1 1 32 51 -8.370 -0.016 -7.024 -2.729 1.810 -3.550 -1.954 D 118 116 6 119 3 0 0 31 50 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 19 - U - - - ML 120 119 3 122 3 1 1 31 49 -8.370 -0.291 -2.475 -0.748 -1.157 -0.341 1.116 D 121 119 3 122 3 0 0 30 49 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 20 - u - - - ML 123 122 3 125 3 1 1 30 48 -8.097 -0.019 -6.751 -0.835 0.208 -1.608 0.968 D 124 122 3 125 3 0 0 28 47 -7.810 -0.362 -2.202 IL 125 125 3 125 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 21 - G - - - ML 126 125 3 128 3 1 1 28 47 -8.370 -0.290 -2.481 0.105 -2.046 1.217 -1.482 D 127 125 3 128 3 0 0 27 46 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 22 - U - - - ML 129 128 3 131 3 1 1 27 46 -8.098 -0.019 -6.752 -1.738 -1.690 -2.483 1.683 D 130 128 3 131 3 0 0 26 45 -7.807 -3.320 -0.159 IL 131 131 3 131 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 23 - u - - - ML 132 131 3 134 3 1 1 26 45 -8.480 -0.017 -6.798 0.295 -0.904 -1.189 0.849 D 133 131 3 134 3 0 0 25 44 -6.808 -0.277 -2.591 IL 134 134 3 134 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 35 - A - - MR 135 134 3 137 3 1 1 25 44 -8.737 -0.014 -7.055 1.848 -3.190 -2.744 -2.817 D 136 134 3 137 3 0 0 24 42 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 34 - G - - MR 138 137 3 140 5 1 1 24 43 -7.453 -0.030 -7.269 -7.481 -8.372 -2.413 -3.743 1.857 -3.124 D 139 137 3 140 5 0 0 23 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 24 33 G U - - MP 141 140 3 145 6 2 2 23 42 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.136 -2.800 -4.329 0.761 -5.442 -6.253 -0.976 -4.307 -3.898 0.657 -4.458 3.470 -1.307 -5.280 -2.909 -2.953 ML 142 140 3 145 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 25 32 C G - - MP 147 146 6 151 6 2 2 21 40 -9.288 -9.227 -0.019 -8.004 -8.284 -8.679 -4.294 -4.356 -4.071 -0.664 1.209 -4.532 3.230 -3.645 -4.110 -0.541 -4.434 -2.472 0.655 -4.395 -0.576 -2.989 ML 148 146 6 151 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 26 31 U G - - MP 153 152 6 157 4 2 2 19 38 -7.380 -7.587 -0.039 -6.002 -4.898 -4.850 -4.420 -1.119 -2.969 -4.724 1.329 -3.803 -4.470 -1.058 -4.684 -2.834 0.383 -4.904 3.397 -3.306 ML 154 152 6 157 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 27 - G - - - ML 159 158 6 161 3 1 1 16 34 -8.370 -0.016 -7.024 -2.413 -3.743 1.857 -3.124 D 160 158 6 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 28 - A - - - ML 162 161 3 164 3 1 1 14 33 -8.370 -0.016 -7.024 1.848 -3.190 -2.744 -2.817 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 29 - A - - - ML 165 164 3 167 3 1 1 13 31 -8.370 -0.016 -7.024 1.142 -1.284 -1.386 -0.001 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 30 - G - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 0.101 -2.048 1.219 -1.484 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR51 ACC RF01305 DESC Small nucleolar RNA sR51 LENG 56 MAXL 134 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 02:51:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01305/CM NSEQ 4 EFFN 3.699219 CKSUM 2827658805 STATS LOCAL MSV -7.6818 0.71972 STATS LOCAL VITERBI -8.5878 0.71972 STATS LOCAL FORWARD -3.9714 0.71972 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.43403 1.66094 1.09805 1.43476 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 2.33154 2.88033 0.35775 1.91401 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 2.59649 1.14657 1.51576 0.94649 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 3.13529 0.69989 2.94512 0.89826 3 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 3.24942 4.19119 0.08048 3.75497 4 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 0.08564 3.79645 3.47027 3.55743 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 3.14436 3.02099 3.67821 0.12456 6 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 3.24942 4.19119 0.08048 3.75497 7 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 0.17348 3.49143 2.35330 3.38878 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 2.86484 1.11301 2.69154 0.60392 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 2.95401 3.78882 0.10398 3.72967 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 0.08564 3.79645 3.47027 3.55743 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 12 0.48973 2.78871 1.43408 2.43756 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.38958 4.12713 1.18244 1.46634 0.26236 1.09861 0.40547 13 1.89473 1.05524 2.43652 0.88172 13 u - - - 1.38629 1.38629 1.38629 1.38629 0.04653 3.78408 3.78408 1.46634 0.26236 0.10006 2.35161 14 3.51121 0.10541 4.06635 2.93668 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 2.60070 1.79723 2.39612 0.40204 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 3.79009 0.13310 3.62910 2.58378 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 1.21630 3.42987 0.46267 3.17766 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 3.51121 0.10541 4.06635 2.93668 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 1.98880 2.26828 1.62170 0.57610 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.23564 4.12713 1.64088 1.46634 0.26236 1.09861 0.40547 20 2.04514 1.22265 2.58839 0.69105 20 U - - - 1.38629 1.38629 1.38629 1.38629 0.04002 3.93151 3.93151 1.46634 0.26236 0.15396 1.94706 21 1.32344 2.92338 0.50865 2.54181 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.23488 4.12713 1.64399 1.46634 0.26236 1.09861 0.40547 22 2.76297 2.70115 3.28610 0.18348 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93224 3.93224 1.46634 0.26236 2.63755 0.07422 23 1.17882 2.06494 2.26420 0.77302 23 u - - - 1.38629 1.38629 1.38629 1.38629 0.03999 3.93224 3.93224 1.46634 0.26236 0.15440 1.94440 24 2.19407 3.43102 0.20157 3.25093 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 25 3.12796 0.26542 2.95537 1.98596 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 3.40851 1.86849 3.26266 0.25584 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 3.24942 4.19119 0.08048 3.75497 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 0.08564 3.79645 3.47027 3.55743 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 0.56467 2.34918 2.42407 1.39657 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 30 1.32660 2.92496 0.50690 2.54345 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 2.46096 3.45070 0.17440 3.14733 31 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 1.35932 3.11882 0.44016 2.90006 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 3.46955 2.35609 3.23045 0.18088 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 3.24942 4.19119 0.08048 3.75497 34 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 0.08564 3.79645 3.47027 3.55743 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 3.37488 2.19961 3.21348 0.20492 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 2.87053 3.80184 0.11343 3.56725 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 0.66258 2.58398 1.63003 1.54607 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 0.49108 2.78803 1.43114 2.43660 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 3.24942 4.19119 0.08048 3.75497 40 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 3.24942 4.19119 0.08048 3.75497 41 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 3.24942 4.19119 0.08048 3.75497 42 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 3.90786 0.12487 3.64137 2.64383 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 0.41851 2.85832 1.54460 2.64210 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 3.62647 2.71470 3.30570 0.13870 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 0.08564 3.79645 3.47027 3.55743 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 3.51121 0.10541 4.06635 2.93668 47 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 3.14436 3.02099 3.67821 0.12456 48 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 2.24674 3.10558 0.23035 2.89671 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 50 2.04981 2.61614 0.34705 2.39264 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 51 3.01678 0.27907 2.70411 2.05867 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 52 2.31036 1.43128 2.85303 0.50401 52 U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 53 3.24942 4.19119 0.08048 3.75497 53 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 54 0.08564 3.79645 3.47027 3.55743 54 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 55 1.88258 2.31704 0.91793 1.05012 55 g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 56 1.74945 1.44858 1.57769 0.95510 56 u - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //