INFERNAL1/a [1.1.5 | Sep 2023] NAME snoU49 ACC RF01300 DESC Small nucleolar RNA U49 STATES 199 NODES 59 CLEN 65 W 81 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 02:09:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01300/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.495117 CKSUM 224884205 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.10 NC 34.90 EFP7GF -9.7153 0.71899 ECMLC 0.61776 -8.13844 1.96124 1600000 614914 0.001951 ECMGC 0.44111 -14.77132 -2.09215 1600000 107403 0.003724 ECMLI 0.60235 -5.37716 3.86860 1600000 314659 0.003814 ECMGI 0.46953 -10.74106 0.47363 1600000 77426 0.005166 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 81 101 -7.163 -7.370 -0.046 -5.784 IL 1 1 2 1 4 1 22 85 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 22 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 22 81 101 -8.165 -0.018 -6.819 -0.182 -1.034 -1.453 1.179 D 4 2 3 5 3 0 16 80 100 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 21 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 21 80 100 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 7 5 3 8 3 0 16 79 99 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 20 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 1 20 79 99 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 10 8 3 11 3 0 15 78 98 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 19 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 1 19 78 98 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 13 11 3 14 3 0 14 77 97 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 18 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 15 14 3 17 3 1 18 77 97 -8.165 -0.018 -6.819 0.443 -1.670 0.892 -1.086 D 16 14 3 17 3 0 14 76 96 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - g - - - ML 18 17 3 20 3 1 17 76 96 -8.165 -0.018 -6.819 0.586 -1.620 0.754 -1.037 D 19 17 3 20 3 0 13 75 95 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 16 75 95 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 22 20 3 23 3 0 12 74 93 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 16 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 16 74 94 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.672 D 25 23 3 26 3 0 11 73 92 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 15 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 15 73 93 -8.165 -0.195 -3.027 1.793 -2.779 -2.370 -2.362 D 28 26 3 29 3 0 11 71 91 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 15 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - a - - - ML 30 29 3 32 3 1 16 72 92 -7.991 -0.020 -6.645 0.780 -1.410 0.425 -0.826 D 31 29 3 32 3 0 10 70 90 -7.318 -2.831 -0.229 IL 32 32 3 32 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 15 71 91 -7.991 -0.020 -6.645 -1.637 -2.866 1.736 -2.253 D 34 32 3 35 3 0 10 69 89 -7.318 -2.831 -0.229 IL 35 35 3 35 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 14 70 89 -7.991 -0.020 -6.645 1.730 -2.425 -2.051 -1.972 D 37 35 3 38 3 0 9 68 88 -7.318 -2.831 -0.229 IL 38 38 3 38 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 39 38 3 41 3 1 13 69 88 -8.379 -0.018 -6.697 0.627 -0.871 -1.060 0.515 D 40 38 3 41 3 0 9 68 87 -6.416 -0.376 -2.199 IL 41 41 3 41 3 1 12 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 66 - U - - MR 42 41 3 44 3 1 12 68 87 -8.543 -0.016 -6.861 -0.683 -1.040 -0.576 1.151 D 43 41 3 44 3 0 6 66 86 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 11 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 65 - U - - MR 45 44 3 47 3 1 12 67 86 -8.543 -0.016 -6.861 -0.683 -1.040 -0.576 1.151 D 46 44 3 47 3 0 6 65 85 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 10 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 64 - u - - MR 48 47 3 50 3 1 11 66 85 -8.543 -0.016 -6.861 -0.877 0.362 -1.664 0.891 D 49 47 3 50 3 0 5 64 84 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 10 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 63 - c - - MR 51 50 3 53 3 1 10 65 84 -8.543 -0.016 -6.861 0.110 0.398 -0.375 -0.265 D 52 50 3 53 3 0 4 63 83 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 9 66 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 62 - G - - MR 54 53 3 56 3 1 9 64 83 -8.543 -0.016 -6.861 -0.109 -1.952 1.280 -1.374 D 55 53 3 56 3 0 3 62 82 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 8 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 61 - U - - MR 57 56 3 59 5 1 9 63 82 -7.270 -0.034 -7.085 -7.298 -8.189 -0.683 -1.040 -0.576 1.151 D 58 56 3 59 5 0 3 62 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 6 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 60 G C - - MP 60 59 3 64 6 2 8 62 81 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -3.501 -2.625 -3.540 0.780 -3.816 -4.075 0.359 -3.919 -3.589 3.100 -3.997 -0.451 0.057 0.543 -1.507 -2.581 ML 61 59 3 64 6 1 4 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 3 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 1 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 5 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 5 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 59 c g - - MP 66 65 6 70 4 2 7 60 79 -7.163 -7.370 -0.046 -5.784 -2.539 -2.675 -2.664 0.514 0.022 -3.445 2.707 -2.793 -2.711 0.518 -0.219 -1.114 1.099 -2.833 -0.268 -1.809 ML 67 65 6 70 4 1 3 60 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 60 80 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 59 79 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 5 62 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 4 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 16 - a - - - ML 72 71 6 74 3 1 6 57 77 -8.165 -0.018 -6.819 0.859 -1.021 -1.166 0.319 D 73 71 6 74 3 0 0 56 76 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 4 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 17 - A - - - ML 75 74 3 77 3 1 5 56 76 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 76 74 3 77 3 0 0 55 75 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 59 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 18 - U - - - ML 78 77 3 80 3 1 4 55 75 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 79 77 3 80 3 0 0 54 73 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 3 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - c - - - ML 81 80 3 83 3 1 3 54 74 -8.165 -0.018 -6.819 -0.533 0.633 0.013 -0.418 D 82 80 3 83 3 0 0 53 72 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 2 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - a - - - ML 84 83 3 86 3 1 2 53 72 -8.165 -0.018 -6.819 0.343 0.225 -1.138 0.149 D 85 83 3 86 3 0 0 52 71 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 21 - C - - - ML 87 86 3 89 3 1 1 52 71 -8.165 -0.369 -2.169 -0.248 1.108 -1.672 -0.540 D 88 86 3 89 3 0 0 51 70 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - A - - - ML 90 89 3 92 3 1 3 51 70 -7.818 -0.023 -6.473 1.648 -2.080 -1.741 -1.595 D 91 89 3 92 3 0 0 49 68 -7.883 -3.396 -0.151 IL 92 92 3 92 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - a - - - ML 93 92 3 95 3 1 2 50 69 -7.818 -0.023 -6.473 0.335 -0.781 -0.083 0.278 D 94 92 3 95 3 0 0 48 67 -7.883 -3.396 -0.151 IL 95 95 3 95 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - A - - - ML 96 95 3 98 3 1 1 49 68 -1.713 -0.548 -6.473 1.648 -2.080 -1.741 -1.595 D 97 95 3 98 3 0 0 47 66 -7.883 -0.342 -2.274 IL 98 98 3 98 3 1 1 49 68 -2.147 -0.435 -4.848 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - c - - - ML 99 98 3 101 3 1 1 47 66 -8.165 -0.018 -6.819 -0.492 0.477 0.202 -0.421 D 100 98 3 101 3 0 0 46 65 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - A - - - ML 102 101 3 104 3 1 1 46 65 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 103 101 3 104 3 0 0 45 64 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - U - - - ML 105 104 3 107 3 1 1 45 64 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 106 104 3 107 3 0 0 44 63 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - A - - - ML 108 107 3 110 3 1 1 44 63 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 109 107 3 110 3 0 0 43 62 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - G - - - ML 111 110 3 113 3 1 1 43 62 -8.543 -0.016 -6.861 -2.004 -3.285 1.804 -2.672 D 112 110 3 113 3 0 0 42 61 -5.620 -0.734 -1.403 IL 113 113 3 113 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 58 - A - - MR 114 113 3 116 3 1 1 42 61 -8.543 -0.016 -6.861 1.793 -2.779 -2.370 -2.362 D 115 113 3 116 3 0 0 40 59 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 57 - C - - MR 117 116 3 119 3 1 1 41 60 -8.543 -0.016 -6.861 -2.234 1.734 -3.066 -1.550 D 118 116 3 119 3 0 0 39 58 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 56 - g - - MR 120 119 3 122 3 1 1 40 59 -8.543 -0.016 -6.861 0.586 -1.620 0.754 -1.037 D 121 119 3 122 3 0 0 38 57 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 55 - A - - MR 123 122 3 125 3 1 1 39 58 -8.543 -0.016 -6.861 1.793 -2.779 -2.370 -2.362 D 124 122 3 125 3 0 0 37 56 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 54 - C - - MR 126 125 3 128 3 1 1 38 57 -8.543 -0.016 -6.861 -2.234 1.734 -3.066 -1.550 D 127 125 3 128 3 0 0 36 55 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 53 - A - - MR 129 128 3 131 3 1 1 37 56 -8.543 -0.016 -6.861 1.793 -2.779 -2.370 -2.362 D 130 128 3 131 3 0 0 35 54 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 52 - a - - MR 132 131 3 134 3 1 1 36 55 -8.543 -0.016 -6.861 0.818 0.133 -1.235 -0.483 D 133 131 3 134 3 0 0 34 53 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 51 - A - - MR 135 134 3 137 5 1 1 35 54 -7.270 -0.034 -7.085 -7.298 -8.189 1.793 -2.779 -2.370 -2.362 D 136 134 3 137 5 0 0 34 53 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 31 50 G U - - MP 138 137 3 142 6 2 2 34 53 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -3.876 -2.576 -4.061 0.959 -4.986 -5.731 -0.547 -4.054 -3.664 1.003 -4.202 3.311 -0.897 -4.867 -2.488 -2.715 ML 139 137 3 142 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 32 49 A U - - MP 144 143 6 148 6 2 2 32 51 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -4.166 -3.107 -4.151 3.528 -4.684 -5.789 -0.359 -4.167 -4.034 0.673 -4.600 -0.527 -0.774 -4.909 -2.298 -2.967 ML 145 143 6 148 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 33 48 A U - - MP 150 149 6 154 6 2 2 30 49 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -4.166 -3.107 -4.151 3.528 -4.684 -5.789 -0.359 -4.167 -4.034 0.673 -4.600 -0.527 -0.774 -4.909 -2.298 -2.967 ML 151 149 6 154 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 34 47 G C - - MP 156 155 6 160 6 2 2 28 47 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -5.137 -3.285 -5.283 -0.070 -5.787 -4.844 -1.053 -5.547 -4.576 3.720 -4.886 -1.002 -1.428 -4.724 -3.113 -4.154 ML 157 155 6 160 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 35 46 U A - - MP 162 161 6 166 6 2 2 26 45 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -4.682 -4.516 -4.464 -0.779 -3.307 -4.982 1.029 -4.035 -4.465 -0.588 -4.813 -2.399 3.519 -4.812 -0.971 -3.234 ML 163 161 6 166 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 36 45 G C - - MP 168 167 6 172 4 2 2 24 43 -7.163 -7.370 -0.046 -5.784 -5.137 -3.285 -5.283 -0.070 -5.787 -4.844 -1.053 -5.547 -4.576 3.720 -4.886 -1.002 -1.428 -4.724 -3.113 -4.154 ML 169 167 6 172 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 37 - C - - - ML 174 173 6 176 3 1 1 21 40 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 175 173 6 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 38 - C - - - ML 177 176 3 179 3 1 1 20 39 -8.165 -0.018 -6.819 -2.234 1.734 -3.066 -1.550 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 39 - G - - - ML 180 179 3 182 3 1 1 19 37 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.672 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 40 - U - - - ML 183 182 3 185 3 1 1 17 36 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 41 - A - - - ML 186 185 3 188 3 1 1 16 35 -8.165 -0.018 -6.819 1.793 -2.779 -2.370 -2.362 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 42 - U - - - ML 189 188 3 191 3 1 1 15 33 -8.165 -0.018 -6.819 -1.865 -1.796 -2.615 1.711 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 43 - G - - - ML 192 191 3 194 3 1 1 13 31 -8.165 -0.018 -6.819 -2.004 -3.285 1.804 -2.672 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 44 - A - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 1.793 -2.779 -2.370 -2.362 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 58 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoU49 ACC RF01300 DESC Small nucleolar RNA U49 LENG 65 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 02:09:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01300/CM NSEQ 5 EFFN 2.846680 CKSUM 224884205 STATS LOCAL MSV -8.3311 0.71899 STATS LOCAL VITERBI -8.6820 0.71899 STATS LOCAL FORWARD -3.5219 0.71899 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.17207 1.48276 1.49140 1.43460 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 0.00000 * 1 1.53303 2.16271 2.45962 0.53847 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 2 3.12436 0.15309 3.69834 2.61429 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 3 3.12436 0.15309 3.69834 2.61429 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 4 3.12436 0.15309 3.69834 2.61429 4 C - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 5 1.07449 2.62434 0.73824 2.22480 5 g - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 6 0.96940 2.58831 0.83592 2.18863 6 g - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 7 2.82768 2.75512 3.35294 0.17166 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 8 2.93269 3.84028 0.11390 3.41390 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 9 0.12103 3.46907 3.17119 3.19689 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.17012 4.02594 1.97623 1.46634 0.26236 1.09861 0.40547 10 0.82887 2.42756 1.06932 2.02522 10 a - - : 1.38629 1.38629 1.38629 1.38629 0.04144 3.89727 3.89727 1.46634 0.26236 2.27887 0.10803 11 2.67006 3.54374 0.15355 3.11926 11 G - - : 1.38629 1.38629 1.38629 1.38629 0.04144 3.89727 3.89727 1.46634 0.26236 2.27887 0.10803 12 0.15996 3.20995 2.93691 2.91080 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.04144 3.89727 3.89727 1.46634 0.26236 2.27887 0.10803 13 0.93792 2.02486 2.15772 1.01899 13 a - - : 1.38629 1.38629 1.38629 1.38629 0.04144 3.89727 3.89727 1.46634 0.26236 0.22916 1.58572 14 2.11078 2.49509 0.49689 1.67159 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 15 2.16565 0.70380 1.69378 1.57601 15 c - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 16 0.77052 2.13757 2.24012 1.16206 16 a - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 17 0.12103 3.46907 3.17119 3.19689 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 18 2.82768 2.75512 3.35294 0.17166 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 19 1.81572 0.90840 1.36029 1.72864 19 c - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 20 1.14456 1.21000 2.21440 1.29382 20 a - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 21 1.58967 0.57429 2.63686 1.82438 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.30407 4.02594 1.40917 1.46634 0.26236 1.09861 0.40547 22 0.21243 2.95206 2.70479 2.62738 22 A - - - 1.38629 1.38629 1.38629 1.38629 0.04724 3.76911 3.76911 1.46634 0.26236 2.75312 0.06585 23 1.15207 1.94978 1.43515 1.19194 23 a - - - 1.38629 1.38629 1.38629 1.38629 0.04724 3.76911 3.76911 1.46634 0.26236 2.75312 0.06585 24 0.21243 2.95206 2.70479 2.62738 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.46267 1.05749 3.76911 0.12794 2.11948 0.13634 2.05997 25 1.78311 1.02219 1.22133 1.73024 26 c - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 26 0.12103 3.46907 3.17119 3.19689 27 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 27 2.82768 2.75512 3.35294 0.17166 28 U - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 28 0.12103 3.46907 3.17119 3.19689 29 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 29 2.93269 3.84028 0.11390 3.41390 30 G - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 30 2.02765 3.12937 0.25639 2.98049 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 31 0.25851 3.06069 2.03907 2.97994 32 A - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 32 0.25852 3.06067 2.03907 2.97992 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 33 2.73417 3.47024 0.13830 3.40795 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 34 3.23868 2.10778 3.01781 0.23526 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 35 2.73305 3.46879 0.13852 3.40597 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 36 3.12436 0.15309 3.69834 2.61429 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 37 3.12436 0.15309 3.69834 2.61429 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 38 2.93269 3.84028 0.11390 3.41390 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 39 2.82768 2.75512 3.35294 0.17166 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 40 0.12103 3.46907 3.17119 3.19689 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 41 2.82768 2.75512 3.35294 0.17166 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 42 2.93269 3.84028 0.11390 3.41390 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 43 0.12103 3.46907 3.17119 3.19689 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 44 3.59620 0.16507 3.30862 2.42850 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 45 0.26669 3.20668 1.94446 2.98512 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 46 3.60218 0.16464 3.31139 2.42963 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 47 3.20748 2.36072 2.87163 0.21247 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 48 3.21140 2.36130 2.87324 0.21210 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 49 3.19994 2.09904 2.92979 0.24430 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 50 0.12103 3.46907 3.17119 3.19689 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 51 0.79711 1.27514 2.30035 1.77340 52 a - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 52 0.12103 3.46907 3.17119 3.19689 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 53 3.12436 0.15309 3.69834 2.61429 54 C - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 54 0.12103 3.46907 3.17119 3.19689 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 55 0.96940 2.58831 0.83592 2.18863 56 g - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 56 3.12436 0.15309 3.69834 2.61429 57 C - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 57 0.12103 3.46907 3.17119 3.19689 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 58 1.49842 2.22640 0.63354 1.98130 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 59 2.62846 0.39806 2.31319 1.84994 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 60 1.92251 2.16672 1.79730 0.55606 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 61 1.48425 2.83184 0.46669 2.43785 62 G - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 62 1.31862 1.08485 1.64441 1.60238 63 c - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 63 2.06383 1.11362 2.61610 0.75167 64 u - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 64 1.92251 2.16672 1.79730 0.55606 65 U - - : 1.38629 1.38629 1.38629 1.38629 0.03635 4.02594 4.02594 1.46634 0.26236 1.09861 0.40547 65 1.92251 2.16672 1.79730 0.55606 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.16323 1.89313 * 2.04396 0.13871 0.00000 * //