INFERNAL1/a [1.1.5 | Sep 2023] NAME snoU25 ACC RF01298 DESC Small nucleolar RNA U25 STATES 211 NODES 62 CLEN 69 W 85 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 22:52:52 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01298/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.450195 CKSUM 818170350 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 51.90 NC 49.40 EFP7GF -8.1048 0.71890 ECMLC 0.71192 -5.21571 2.92336 1600000 394120 0.003045 ECMGC 0.42314 -15.70628 -2.45122 1600000 109120 0.003666 ECMLI 0.66142 -3.45541 4.64589 1600000 254859 0.004708 ECMGI 0.45914 -10.61755 0.85048 1600000 77410 0.005167 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 106 -6.737 -6.944 -0.062 -5.358 IL 1 1 2 1 4 1 25 89 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 88 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 24 85 106 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 4 2 3 5 3 0 19 84 104 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 23 86 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 69 - C - - MR 6 5 3 8 3 1 23 84 105 -8.173 -0.021 -6.491 -1.281 1.472 -2.084 -0.790 D 7 5 3 8 3 0 17 83 103 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 22 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 68 - C - - MR 9 8 3 11 5 1 22 83 104 -6.925 -0.044 -6.740 -6.952 -7.844 -1.281 1.472 -2.084 -0.790 D 10 8 3 11 5 0 16 82 102 -5.352 -0.707 -2.978 -4.409 -2.404 IR 11 11 3 11 5 1 20 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 67 G C - - MP 12 11 3 16 6 2 22 82 103 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -4.365 -2.916 -4.437 0.444 -4.702 -4.541 -0.158 -4.647 -4.071 3.533 -4.437 -0.605 -0.555 -4.218 -2.176 -3.320 ML 13 11 3 16 6 1 18 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 17 81 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 13 79 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 19 82 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 19 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 66 C G - - MP 18 17 6 22 6 2 20 80 101 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -4.164 -4.032 -3.917 -0.304 -2.726 -4.378 3.411 -3.496 -3.956 0.001 -4.255 -1.976 0.823 -4.257 -0.426 -2.810 ML 19 17 6 22 6 1 17 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 15 79 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 12 78 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 18 80 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 18 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 65 C G - - MP 24 23 6 28 4 2 18 78 99 -6.737 -6.944 -0.062 -5.358 -4.164 -4.032 -3.917 -0.304 -2.726 -4.378 3.411 -3.496 -3.956 0.001 -4.255 -1.976 0.823 -4.257 -0.426 -2.810 ML 25 23 6 28 4 1 16 79 99 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 13 78 98 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 12 77 97 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 17 80 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 17 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - A - - - ML 30 29 6 32 3 1 17 76 96 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 31 29 6 32 3 0 11 75 95 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 16 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - A - - - ML 33 32 3 35 3 1 16 75 95 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 34 32 3 35 3 0 11 74 94 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 15 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - U - - - ML 36 35 3 38 3 1 15 74 94 -7.769 -0.024 -6.424 -1.135 -1.195 -1.848 1.501 D 37 35 3 38 3 0 10 73 93 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 15 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - G - - - ML 39 38 3 41 3 1 15 73 93 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 40 38 3 41 3 0 9 71 91 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 14 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - A - - - ML 42 41 3 44 3 1 14 72 92 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 43 41 3 44 3 0 8 70 90 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 13 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - u - - - ML 45 44 3 47 3 1 13 71 91 -7.769 -0.024 -6.424 -0.582 0.047 -1.325 0.926 D 46 44 3 47 3 0 8 69 89 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 12 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - G - - - ML 48 47 3 50 3 1 13 70 90 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 49 47 3 50 3 0 7 68 88 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 12 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - A - - - ML 51 50 3 53 3 1 12 69 88 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 52 50 3 53 3 0 6 67 87 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 11 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - G - - - ML 54 53 3 56 3 1 11 68 87 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 55 53 3 56 3 0 5 66 86 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 10 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - A - - - ML 57 56 3 59 3 1 10 67 86 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 58 56 3 59 3 0 5 65 85 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 9 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - u - - - ML 60 59 3 62 3 1 10 66 85 -7.769 -0.024 -6.424 -0.582 0.047 -1.325 0.926 D 61 59 3 62 3 0 4 64 84 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 9 68 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - C - - - ML 63 62 3 65 3 1 9 64 84 -7.769 -0.024 -6.424 -1.281 1.472 -2.084 -0.790 D 64 62 3 65 3 0 3 63 83 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 8 67 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - A - - - ML 66 65 3 68 3 1 8 63 83 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 67 65 3 68 3 0 3 62 82 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 7 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - A - - - ML 69 68 3 71 3 1 8 62 82 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 70 68 3 71 3 0 2 61 81 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 7 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - U - - - ML 72 71 3 74 3 1 7 61 81 -7.769 -0.024 -6.424 -1.135 -1.195 -1.848 1.501 D 73 71 3 74 3 0 1 60 80 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 6 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - C - - - ML 75 74 3 77 3 1 7 60 80 -7.769 -0.024 -6.424 -1.281 1.472 -2.084 -0.790 D 76 74 3 77 3 0 1 59 78 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 5 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - A - - - ML 78 77 3 80 3 1 6 59 79 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 79 77 3 80 3 0 0 58 77 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 5 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - C - - - ML 81 80 3 83 3 1 5 58 77 -7.769 -0.024 -6.424 -1.281 1.472 -2.084 -0.790 D 82 80 3 83 3 0 0 57 76 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 4 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - A - - - ML 84 83 3 86 3 1 5 57 76 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 85 83 3 86 3 0 0 56 75 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 3 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - G - - - ML 87 86 3 89 3 1 4 56 75 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 88 86 3 89 3 0 0 55 74 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 3 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - A - - - ML 90 89 3 92 3 1 3 55 74 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 91 89 3 92 3 0 0 54 73 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 2 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - C - - - ML 93 92 3 95 3 1 3 54 73 -8.173 -0.021 -6.491 -1.281 1.472 -2.084 -0.790 D 94 92 3 95 3 0 0 53 72 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 64 - A - - MR 96 95 3 98 3 1 2 53 72 -8.173 -0.021 -6.491 1.620 -1.983 -1.654 -1.490 D 97 95 3 98 3 0 0 51 70 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 63 - G - - MR 99 98 3 101 3 1 2 52 71 -8.173 -0.021 -6.491 -1.165 -2.314 1.606 -1.699 D 100 98 3 101 3 0 0 50 69 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 62 - U - - MR 102 101 3 104 3 1 2 51 70 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 103 101 3 104 3 0 0 49 68 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 61 - C - - MR 105 104 3 107 3 1 1 50 69 -8.173 -0.021 -6.491 -1.281 1.472 -2.084 -0.790 D 106 104 3 107 3 0 0 48 67 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 60 - U - - MR 108 107 3 110 3 1 1 49 68 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 109 107 3 110 3 0 0 47 66 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 59 - C - - MR 111 110 3 113 3 1 1 48 67 -8.173 -0.021 -6.491 -1.281 1.472 -2.084 -0.790 D 112 110 3 113 3 0 0 46 65 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 58 - U - - MR 114 113 3 116 3 1 1 47 66 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 115 113 3 116 3 0 0 45 64 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 57 - A - - MR 117 116 3 119 3 1 1 46 65 -8.173 -0.021 -6.491 1.620 -1.983 -1.654 -1.490 D 118 116 3 119 3 0 0 44 63 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 56 - U - - MR 120 119 3 122 3 1 1 45 64 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 121 119 3 122 3 0 0 43 62 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 45 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 55 - C - - MR 123 122 3 125 3 1 1 44 63 -8.173 -0.021 -6.491 -1.281 1.472 -2.084 -0.790 D 124 122 3 125 3 0 0 42 61 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 44 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 54 - A - - MR 126 125 3 128 3 1 1 43 62 -8.173 -0.021 -6.491 1.620 -1.983 -1.654 -1.490 D 127 125 3 128 3 0 0 41 60 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 43 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 53 - U - - MR 129 128 3 131 3 1 1 42 61 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 130 128 3 131 3 0 0 40 59 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 42 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 52 - U - - MR 132 131 3 134 3 1 1 41 60 -8.173 -0.021 -6.491 -1.135 -1.195 -1.848 1.501 D 133 131 3 134 3 0 0 39 58 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 41 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 51 - C - - MR 135 134 3 137 5 1 1 40 59 -6.925 -0.044 -6.740 -6.952 -7.844 -1.281 1.472 -2.084 -0.790 D 136 134 3 137 5 0 0 38 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 27 50 C G - - MP 138 137 3 142 6 2 2 39 58 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -4.164 -4.032 -3.917 -0.304 -2.726 -4.378 3.411 -3.496 -3.956 0.001 -4.255 -1.976 0.823 -4.257 -0.426 -2.810 ML 139 137 3 142 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 28 49 U A - - MP 144 143 6 148 6 2 2 37 56 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -3.806 -3.615 -3.685 0.060 -2.714 -4.283 1.604 -3.381 -3.694 0.381 -4.086 -1.525 3.106 -3.970 -0.400 -2.553 ML 145 143 6 148 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 29 48 G C - - MP 150 149 6 154 6 2 2 35 54 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -4.365 -2.916 -4.437 0.444 -4.702 -4.541 -0.158 -4.647 -4.071 3.533 -4.437 -0.605 -0.555 -4.218 -2.176 -3.320 ML 151 149 6 154 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 30 47 U A - - MP 156 155 6 160 6 2 2 33 52 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -3.806 -3.615 -3.685 0.060 -2.714 -4.283 1.604 -3.381 -3.694 0.381 -4.086 -1.525 3.106 -3.970 -0.400 -2.553 ML 157 155 6 160 6 1 1 31 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 31 46 u g - - MP 162 161 6 166 6 2 2 31 50 -9.031 -8.970 -0.022 -7.746 -8.026 -8.421 -3.706 -3.609 -3.495 0.017 -2.381 -3.986 1.894 -3.114 -3.532 0.279 -3.865 -1.622 1.103 -3.826 2.713 -2.424 ML 163 161 6 166 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 30 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 32 45 C G - - MP 168 167 6 172 4 2 2 29 48 -6.737 -6.944 -0.062 -5.358 -4.164 -4.032 -3.917 -0.304 -2.726 -4.378 3.411 -3.496 -3.956 0.001 -4.255 -1.976 0.823 -4.257 -0.426 -2.810 ML 169 167 6 172 4 1 1 29 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 31 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 33 - U - - - ML 174 173 6 176 3 1 1 26 45 -7.769 -0.024 -6.424 -1.135 -1.195 -1.848 1.501 D 175 173 6 176 3 0 0 25 44 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 34 - G - - - ML 177 176 3 179 3 1 1 25 44 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 178 176 3 179 3 0 0 24 43 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 35 - A - - - ML 180 179 3 182 3 1 1 24 43 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 181 179 3 182 3 0 0 23 42 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 36 - A - - - ML 183 182 3 185 3 1 1 23 41 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 184 182 3 185 3 0 0 21 40 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 37 - A - - - ML 186 185 3 188 3 1 1 21 40 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 187 185 3 188 3 0 0 20 39 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 38 - G - - - ML 189 188 3 191 3 1 1 20 39 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 190 188 3 191 3 0 0 19 38 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 39 - C - - - ML 192 191 3 194 3 1 1 19 38 -7.769 -0.024 -6.424 -1.281 1.472 -2.084 -0.790 D 193 191 3 194 3 0 0 18 37 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 40 - A - - - ML 195 194 3 197 3 1 1 18 36 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 196 194 3 197 3 0 0 17 36 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 41 - A - - - ML 198 197 3 200 3 1 1 16 35 -7.769 -0.024 -6.424 1.620 -1.983 -1.654 -1.490 D 199 197 3 200 3 0 0 16 34 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 42 - U - - - ML 201 200 3 203 3 1 1 15 33 -7.769 -0.024 -6.424 -1.135 -1.195 -1.848 1.501 D 202 200 3 203 3 0 0 15 33 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 43 - G - - - ML 204 203 3 206 3 1 1 13 32 -7.769 -0.024 -6.424 -1.165 -2.314 1.606 -1.699 D 205 203 3 206 3 0 0 13 32 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 44 - A - - - ML 207 206 3 209 2 1 1 1 1 * 0.000 1.620 -1.983 -1.654 -1.490 D 208 206 3 209 2 0 0 0 0 * 0.000 IL 209 209 3 209 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 61 ] - - - - - - E 210 209 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoU25 ACC RF01298 DESC Small nucleolar RNA U25 LENG 69 MAXL 158 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 22:52:52 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01298/CM NSEQ 3 EFFN 1.684570 CKSUM 818170350 STATS LOCAL MSV -7.7940 0.71890 STATS LOCAL VITERBI -9.0699 0.71890 STATS LOCAL FORWARD -3.0550 0.71890 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21262 1.41671 1.48090 1.45827 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 0.00000 * 1 2.29430 2.31350 2.79610 0.30218 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 2 2.36659 2.87798 0.23496 2.82425 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 3 2.85798 0.34061 2.58636 1.85797 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 4 2.85883 0.34048 2.58671 1.85810 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 5 0.22615 2.89611 2.65447 2.56619 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 6 0.22615 2.89611 2.65447 2.56619 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 7 2.29430 2.31350 2.79610 0.30218 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 8 2.33914 3.16163 0.22767 2.73575 8 G - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 9 0.22615 2.89611 2.65447 2.56619 9 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 10 1.84434 1.34289 2.36473 0.71989 10 u - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 11 2.33914 3.16163 0.22767 2.73575 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 12 0.22615 2.89611 2.65447 2.56619 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 13 2.33914 3.16163 0.22767 2.73575 13 G - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 14 0.22615 2.89611 2.65447 2.56619 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 15 1.84434 1.34289 2.36473 0.71989 15 u - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 16 2.43291 0.30814 2.99789 2.05950 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 17 0.22615 2.89611 2.65447 2.56619 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 18 0.22615 2.89611 2.65447 2.56619 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 19 2.29430 2.31350 2.79610 0.30218 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 20 2.43291 0.30814 2.99789 2.05950 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 21 0.22615 2.89611 2.65447 2.56619 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 22 2.43291 0.30814 2.99789 2.05950 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 23 0.22615 2.89611 2.65447 2.56619 23 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 24 2.33914 3.16163 0.22767 2.73575 24 G - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 25 0.22615 2.89611 2.65447 2.56619 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 26 2.43291 0.30814 2.99789 2.05950 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 27 2.85117 0.34170 2.58354 1.85692 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 28 2.61538 1.64980 2.32177 0.45150 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 29 2.36794 2.87931 0.23457 2.82618 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 30 2.61686 1.64980 2.32231 0.45125 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 31 2.62646 1.42101 2.37211 0.52271 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 32 2.85710 0.34075 2.58600 1.85784 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 33 2.29430 2.31350 2.79610 0.30218 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 34 2.33914 3.16163 0.22767 2.73575 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 35 0.22615 2.89611 2.65447 2.56619 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 36 0.22615 2.89611 2.65447 2.56619 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 37 0.22615 2.89611 2.65447 2.56619 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 38 2.33914 3.16163 0.22767 2.73575 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 39 2.43291 0.30814 2.99789 2.05950 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 40 0.22615 2.89611 2.65447 2.56619 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 41 0.22615 2.89611 2.65447 2.56619 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 42 2.29430 2.31350 2.79610 0.30218 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 43 2.33914 3.16163 0.22767 2.73575 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 44 0.22615 2.89611 2.65447 2.56619 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 45 2.13163 2.75238 0.29524 2.61421 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 46 1.91657 2.54383 0.38338 2.37762 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 47 0.51364 2.50003 1.48642 2.37064 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 48 3.04690 0.27397 2.71093 2.07416 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 49 0.51332 2.50095 1.48639 2.37192 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 50 2.13442 2.75563 0.29410 2.61850 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 51 2.43291 0.30814 2.99789 2.05950 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 52 2.29430 2.31350 2.79610 0.30218 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 53 2.29430 2.31350 2.79610 0.30218 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 54 0.22615 2.89611 2.65447 2.56619 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 55 2.43291 0.30814 2.99789 2.05950 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 56 2.29430 2.31350 2.79610 0.30218 56 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 57 0.22615 2.89611 2.65447 2.56619 57 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 58 2.29430 2.31350 2.79610 0.30218 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 59 2.43291 0.30814 2.99789 2.05950 59 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 60 2.29430 2.31350 2.79610 0.30218 60 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 61 2.43291 0.30814 2.99789 2.05950 61 C - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 62 2.29430 2.31350 2.79610 0.30218 62 U - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 63 2.33914 3.16163 0.22767 2.73575 63 G - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 64 0.22615 2.89611 2.65447 2.56619 64 A - - - 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 65 2.13330 2.75433 0.29455 2.61679 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 66 2.13403 2.75518 0.29425 2.61791 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 67 3.05350 0.27312 2.71354 2.07544 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 68 2.43291 0.30814 2.99789 2.05950 68 C - - : 1.38629 1.38629 1.38629 1.38629 0.04645 3.78556 3.78556 1.46634 0.26236 1.09861 0.40547 69 2.43291 0.30814 2.99789 2.05950 69 C - - : 1.38629 1.38629 1.38629 1.38629 0.02350 3.76261 * 1.46634 0.26236 0.00000 * //