INFERNAL1/a [1.1.4 | Dec 2020] NAME sR45 ACC RF01274 DESC Small nucleolar RNA sR45 STATES 169 NODES 43 CLEN 55 W 103 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:10:30 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 3.154785 CKSUM 3758128046 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 43.00 NC 33.20 EFP7GF -10.7201 0.71935 ECMLC 0.67051 -5.60242 2.88103 1600000 354452 0.003386 ECMGC 0.48863 -15.49056 -3.36880 1600000 149427 0.002677 ECMLI 0.69187 -3.59192 3.79394 1600000 198811 0.006036 ECMGI 0.54997 -10.85423 -0.85363 1600000 97883 0.004087 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 103 164 -7.379 -7.586 -0.039 -6.000 IL 1 1 2 1 4 1 14 106 166 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 13 105 165 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 1 13 103 164 -8.368 -0.016 -7.022 0.647 -0.044 -0.475 -0.426 D 4 2 3 5 3 0 8 101 161 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 13 104 164 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 12 102 163 -8.368 -0.016 -7.022 -1.148 -2.020 1.440 -0.762 D 7 5 3 8 3 0 7 100 160 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 12 103 163 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - g - - - ML 9 8 3 11 3 1 12 102 162 -8.368 -0.016 -7.022 -0.090 -0.692 0.884 -0.747 D 10 8 3 11 3 0 6 99 160 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 11 102 162 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - g - - - ML 12 11 3 14 3 1 11 101 161 -8.368 -0.016 -7.022 -0.025 -0.245 0.569 -0.535 D 13 11 3 14 3 0 5 99 159 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 10 101 161 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 10 100 160 -8.735 -0.014 -7.053 1.537 -2.117 -0.858 -1.665 D 16 14 3 17 3 0 5 98 158 -5.620 -0.734 -1.403 IL 17 17 3 17 3 1 9 100 160 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 65 - c - - MR 18 17 3 20 3 1 9 99 159 -8.735 -0.014 -7.053 -0.542 0.421 -0.611 0.400 D 19 17 3 20 3 0 3 96 157 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 8 99 159 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 64 - c - - MR 21 20 3 23 3 1 8 98 158 -8.735 -0.014 -7.053 -0.664 0.787 -0.677 0.026 D 22 20 3 23 3 0 2 96 156 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 7 98 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 63 - A - - MR 24 23 3 26 5 1 8 97 157 -7.452 -0.030 -7.267 -7.479 -8.371 1.847 -3.187 -2.741 -2.813 D 25 23 3 26 5 0 2 95 155 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 5 97 157 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 62 U G - - MP 27 26 3 31 6 2 7 96 156 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.895 -4.847 -4.418 -1.116 -2.967 -4.722 1.330 -3.801 -4.468 -1.055 -4.682 -2.831 0.385 -4.902 3.396 -3.304 ML 28 26 3 31 6 1 3 94 154 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 6 1 2 94 154 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 3 31 6 0 0 91 151 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 4 95 155 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 4 95 155 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 61 g c - - MP 33 32 6 37 4 2 5 94 154 -7.379 -7.586 -0.039 -6.000 -4.066 -2.761 -4.153 0.781 -5.143 -5.180 -0.567 -4.391 -3.958 2.722 -4.433 2.489 -0.814 -4.443 -2.528 -2.937 ML 34 32 6 37 4 1 2 93 153 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 1 92 152 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 0 91 151 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 4 94 154 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 3 93 153 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 8 - A - - - ML 39 38 6 41 3 1 4 92 152 -8.368 -0.016 -7.022 1.847 -3.187 -2.741 -2.813 D 40 38 6 41 3 0 0 90 150 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 3 92 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 9 - u - - - ML 42 41 3 44 3 1 3 91 151 -8.735 -0.014 -7.053 -0.643 -1.130 0.004 0.926 D 43 41 3 44 3 0 0 89 149 -5.620 -0.734 -1.403 IL 44 44 3 44 3 1 2 91 151 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 60 - C - - MR 45 44 3 47 3 1 3 90 150 -8.735 -0.014 -7.053 -2.726 1.809 -3.547 -1.951 D 46 44 3 47 3 0 0 88 148 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 90 150 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 59 - G - - MR 48 47 3 50 5 1 3 89 149 -7.452 -0.030 -7.267 -7.479 -8.371 -2.410 -3.740 1.857 -3.121 D 49 47 3 50 5 0 0 87 147 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 1 89 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 58 G C - - MP 51 50 3 55 6 2 4 88 148 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -5.525 -3.477 -5.743 -0.348 -6.323 -4.986 -1.493 -6.009 -4.802 3.781 -5.091 -1.217 -1.861 -4.970 -3.580 -4.609 ML 52 50 3 55 6 1 1 86 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 1 85 145 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 0 82 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 87 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 87 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 57 A U - - MP 57 56 6 61 6 2 3 86 146 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.566 -3.425 -4.498 3.668 -5.267 -6.430 -0.913 -4.485 -4.393 0.236 -4.977 -0.797 -1.324 -5.464 -2.850 -3.310 ML 58 56 6 61 6 1 1 84 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 83 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 80 140 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 85 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 85 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 56 a u - - MP 63 62 6 67 6 2 3 84 144 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -2.131 -1.865 -2.353 1.779 -2.381 -3.075 1.098 -0.637 -2.320 1.307 -2.800 1.152 0.889 -2.456 -0.485 -0.021 ML 64 62 6 67 6 1 1 82 142 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 81 142 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 78 139 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 83 143 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 83 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 55 G C - - MP 69 68 6 73 6 2 3 82 142 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -5.525 -3.477 -5.743 -0.348 -6.323 -4.986 -1.493 -6.009 -4.802 3.781 -5.091 -1.217 -1.861 -4.970 -3.580 -4.609 ML 70 68 6 73 6 1 1 80 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 80 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 77 138 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 81 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 81 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 54 C G - - MP 75 74 6 79 4 2 2 80 140 -7.379 -7.586 -0.039 -6.000 -5.450 -5.431 -4.979 -1.606 -3.529 -5.271 3.755 -4.430 -5.073 -1.464 -5.222 -3.406 -0.125 -5.455 -1.273 -3.888 ML 76 74 6 79 4 1 1 79 139 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 78 138 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 77 137 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 80 140 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 79 139 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - C - - - ML 81 80 6 83 5 1 1 78 138 -7.452 -0.030 -7.267 -7.479 -8.371 -2.726 1.809 -3.547 -1.951 D 82 80 6 83 5 0 0 76 136 -4.959 -0.803 -4.221 -2.596 -2.508 IL 83 83 3 83 5 1 1 78 138 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 53 G C - - MP 84 83 3 88 6 2 2 77 137 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -5.525 -3.477 -5.743 -0.348 -6.323 -4.986 -1.493 -6.009 -4.802 3.781 -5.091 -1.217 -1.861 -4.970 -3.580 -4.609 ML 85 83 3 88 6 1 1 75 135 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 1 74 135 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 0 71 131 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 76 136 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 76 136 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 52 A U - - MP 90 89 6 94 6 2 2 75 135 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.566 -3.425 -4.498 3.668 -5.267 -6.430 -0.913 -4.485 -4.393 0.236 -4.977 -0.797 -1.324 -5.464 -2.850 -3.310 ML 91 89 6 94 6 1 1 73 133 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 72 133 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 69 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 74 134 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 74 134 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 51 G U - - MP 96 95 6 100 6 2 2 73 133 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.134 -2.798 -4.327 0.762 -5.438 -6.249 -0.973 -4.305 -3.896 0.659 -4.457 3.469 -1.304 -5.277 -2.906 -2.952 ML 97 95 6 100 6 1 1 71 131 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 71 131 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 67 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 72 132 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 72 132 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 50 G C - - MP 102 101 6 106 6 2 2 71 131 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -5.525 -3.477 -5.743 -0.348 -6.323 -4.986 -1.493 -6.009 -4.802 3.781 -5.091 -1.217 -1.861 -4.970 -3.580 -4.609 ML 103 101 6 106 6 1 1 69 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 69 129 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 66 126 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 70 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 70 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 49 A U - - MP 108 107 6 112 4 2 2 69 129 -7.264 -8.510 -0.061 -4.963 -4.566 -3.425 -4.498 3.668 -5.267 -6.430 -0.913 -4.485 -4.393 0.236 -4.977 -0.797 -1.324 -5.464 -2.850 -3.310 ML 109 107 6 112 4 1 1 67 128 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 68 128 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 65 125 -12.737 -14.007 -2.036 -0.404 IL 112 112 5 112 4 1 1 68 128 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 68 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 48 - a - - MR 114 113 6 116 3 1 1 67 127 -8.735 -0.014 -7.053 0.641 0.470 -1.420 -0.554 D 115 113 6 116 3 0 0 65 125 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 67 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 47 - A - - MR 117 116 3 119 3 1 1 66 126 -8.735 -0.014 -7.053 1.847 -3.187 -2.741 -2.813 D 118 116 3 119 3 0 0 64 124 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 66 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 46 - G - - MR 120 119 3 122 3 1 1 65 125 -8.735 -0.014 -7.053 -2.410 -3.740 1.857 -3.121 D 121 119 3 122 3 0 0 63 123 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 65 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 45 - u - - MR 123 122 3 125 3 1 1 64 124 -8.735 -0.014 -7.053 -0.600 -1.196 0.509 0.566 D 124 122 3 125 3 0 0 62 122 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 64 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 44 - A - - MR 126 125 3 128 5 1 1 63 123 -7.452 -0.030 -7.267 -7.479 -8.371 1.847 -3.187 -2.741 -2.813 D 127 125 3 128 5 0 0 61 121 -5.352 -0.707 -2.978 -4.409 -2.404 IR 128 128 3 128 5 1 1 63 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 21 43 C G - - MP 129 128 3 133 6 2 2 62 122 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -5.450 -5.431 -4.979 -1.606 -3.529 -5.271 3.755 -4.430 -5.073 -1.464 -5.222 -3.406 -0.125 -5.455 -1.273 -3.888 ML 130 128 3 133 6 1 1 59 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 59 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 3 133 6 0 0 55 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 61 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 61 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 22 42 A U - - MP 135 134 6 139 4 2 2 60 120 -7.379 -2.164 -0.405 -6.000 -4.566 -3.425 -4.498 3.668 -5.267 -6.430 -0.913 -4.485 -4.393 0.236 -4.977 -0.797 -1.324 -5.464 -2.850 -3.310 ML 136 134 6 139 4 1 1 56 116 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 4 1 1 56 116 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 138 134 6 139 4 0 0 54 114 -4.568 -4.250 -2.265 -0.520 IL 139 139 5 139 4 1 1 60 120 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 140 140 6 140 3 1 1 63 123 -0.441 -1.990 -6.405 0.000 0.000 0.000 0.000 [ MATL 33 ] 23 - C - - - ML 141 140 6 143 3 1 1 36 71 -8.368 -0.016 -7.022 -2.726 1.809 -3.547 -1.951 D 142 140 6 143 3 0 0 34 69 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 37 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 24 - C - - - ML 144 143 3 146 3 1 1 35 70 -8.368 -0.016 -7.022 -2.726 1.809 -3.547 -1.951 D 145 143 3 146 3 0 0 33 68 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 36 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 25 - u - - - ML 147 146 3 149 3 1 1 34 69 -8.368 -0.016 -7.022 -1.062 0.637 -1.883 0.761 D 148 146 3 149 3 0 0 32 67 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 35 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 26 - G - - - ML 150 149 3 152 3 1 1 33 68 -8.368 -0.016 -7.022 -2.410 -3.740 1.857 -3.121 D 151 149 3 152 3 0 0 30 65 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 34 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 27 - A - - - ML 153 152 3 155 3 1 1 32 67 -3.077 -0.195 -7.022 1.847 -3.187 -2.741 -2.813 D 154 152 3 155 3 0 0 27 62 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 35 70 -0.756 -1.379 -5.416 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - a - - - ML 156 155 3 158 3 1 1 16 34 -8.368 -0.016 -7.022 0.528 -1.239 0.411 -0.314 D 157 155 3 158 3 0 0 16 34 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - c - - - ML 159 158 3 161 3 1 1 14 33 -8.368 -0.016 -7.022 -0.471 0.252 0.185 -0.073 D 160 158 3 161 3 0 0 15 33 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - G - - - ML 162 161 3 164 3 1 1 13 31 -8.368 -0.016 -7.022 -0.169 -1.498 1.045 -0.527 D 163 161 3 164 3 0 0 13 32 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - g - - - ML 165 164 3 167 2 1 1 1 1 * 0.000 0.596 -1.838 0.843 -1.267 D 166 164 3 167 2 0 0 0 0 * 0.000 IL 167 167 3 167 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 168 167 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME sR45 ACC RF01274 DESC Small nucleolar RNA sR45 LENG 55 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:10:30 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 7 EFFN 3.975098 CKSUM 3758128046 STATS LOCAL MSV -7.7557 0.71935 STATS LOCAL VITERBI -8.3831 0.71935 STATS LOCAL FORWARD -3.9055 0.71935 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.40168 1.38818 1.20169 1.59158 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 0.00000 * 1 0.91472 1.39050 1.72674 1.75702 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 2 2.35707 2.97703 0.33301 1.98344 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 3 1.49596 1.88249 0.70960 2.02558 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 4 1.44096 1.54090 0.93535 1.85366 4 g - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 5 0.28093 3.04343 2.01139 2.75762 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 6 3.48821 1.92026 3.34571 0.23871 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 7 2.20721 3.26318 0.21668 3.06738 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 8 0.07778 3.88853 3.55525 3.65802 8 A - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 9 1.94242 2.27882 1.35988 0.69806 9 u - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 10 3.01972 3.88024 0.09573 3.82442 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 11 0.15543 3.61221 2.44375 3.50224 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 12 1.29841 1.70195 1.13266 1.50268 12 g - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 13 3.01586 3.87455 0.09626 3.81670 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 14 3.88681 0.12061 3.73855 2.66898 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 15 3.61658 0.09529 4.16293 3.02719 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 16 3.02136 3.88265 0.09551 3.82769 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 17 0.15545 3.61206 2.44371 3.50206 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 18 2.24611 3.51783 0.18784 3.33037 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 19 3.01486 3.87308 0.09639 3.81472 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 20 0.15596 3.60711 2.44247 3.49569 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 21 3.88804 0.12055 3.73923 2.66922 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 22 0.15573 3.60935 2.44303 3.49856 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 23 3.61658 0.09529 4.16293 3.02719 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 24 3.61658 0.09529 4.16293 3.02719 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 25 2.27383 0.89642 2.85931 0.83992 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 26 3.33569 4.28585 0.07336 3.84506 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 27 0.07778 3.88853 3.55525 3.65802 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.16502 1.99012 4.17067 1.39219 0.28572 1.09861 0.40547 28 1.00961 2.33227 1.06303 1.64425 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 29 1.79646 1.17089 1.21797 1.47757 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 30 1.54997 2.54137 0.60553 1.81277 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 31 0.95332 2.83506 0.75560 2.45228 35 g - - _ 1.38629 1.38629 1.38629 1.38629 0.28418 1.46135 4.17067 1.78029 0.18463 1.09861 0.40547 32 3.72689 2.81268 3.42079 0.12420 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 33 2.96156 3.92102 0.10178 3.68057 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 34 0.07778 3.88853 3.55525 3.65802 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 35 1.90611 2.32458 0.98179 0.97055 45 u - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 36 3.33569 4.28585 0.07336 3.84506 46 G - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 37 0.07778 3.88853 3.55525 3.65802 47 A - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 38 0.91311 1.01021 2.50047 1.88035 48 a - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 39 3.70548 2.80887 3.41090 0.12542 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 40 3.96985 0.11674 3.72171 2.70130 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 41 3.51831 2.42217 3.29900 0.16877 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 42 3.70278 2.80838 3.40964 0.12558 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 43 3.95610 0.11742 3.71480 2.69874 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 44 2.95071 3.90313 0.10336 3.66079 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 45 3.98343 0.11609 3.72848 2.70380 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 46 1.98831 1.75447 1.74470 0.66286 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 47 3.72987 2.81320 3.42216 0.12403 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 48 4.01743 0.11448 3.74524 2.70993 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 49 3.33569 4.28585 0.07336 3.84506 59 G - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 50 3.61658 0.09529 4.16293 3.02719 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 51 3.29097 0.87493 3.06470 0.69470 61 u - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 52 2.52330 3.54028 0.16115 3.22798 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 53 0.07778 3.88853 3.55525 3.65802 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 54 1.95159 0.78147 1.87070 1.40160 64 c - - : 1.38629 1.38629 1.38629 1.38629 0.03137 4.17067 4.17067 1.46634 0.26236 1.09861 0.40547 55 1.84472 1.04833 1.81774 1.11165 65 c - - : 1.38629 1.38629 1.38629 1.38629 0.01581 4.15511 * 1.46634 0.26236 0.00000 * //