INFERNAL1/a [1.1.4 | Dec 2020] NAME sR34 ACC RF01273 DESC Small nucleolar RNA sR34 STATES 166 NODES 47 CLEN 54 W 70 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:10:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.222656 CKSUM 674949940 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 63.00 NC 35.00 EFP7GF -9.7115 0.71923 ECMLC 0.55753 -9.75815 1.64222 1600000 691119 0.001736 ECMGC 0.43563 -19.18403 -4.64367 1600000 225424 0.001774 ECMLI 0.54366 -8.30156 2.58659 1600000 446646 0.002687 ECMGI 0.44342 -15.52602 -2.17219 1600000 149157 0.002682 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 70 90 -7.063 -7.270 -0.049 -5.684 IL 1 1 2 1 4 1 13 74 94 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 12 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 13 70 90 -8.072 -0.019 -6.726 0.058 -1.761 1.151 -1.174 D 4 2 3 5 3 0 7 69 89 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 12 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 12 69 89 -8.072 -0.019 -6.726 -2.005 1.688 -2.835 -1.365 D 7 5 3 8 3 0 6 68 88 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 11 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 1 11 68 88 -8.072 -0.019 -6.726 -2.005 1.688 -2.835 -1.365 D 10 8 3 11 3 0 5 67 87 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 10 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 11 67 87 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 13 11 3 14 3 0 5 66 85 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 9 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 10 66 86 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 16 14 3 17 3 0 4 65 84 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 9 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 9 65 85 -8.072 -0.019 -6.726 -1.687 -1.648 -2.430 1.671 D 19 17 3 20 3 0 3 64 83 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 8 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 9 64 83 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 22 20 3 23 3 0 3 63 82 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 7 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 8 63 82 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 25 23 3 26 3 0 2 61 81 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 7 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - g - - - ML 27 26 3 29 3 1 7 62 81 -8.072 -0.019 -6.726 -0.516 -0.485 0.972 -0.678 D 28 26 3 29 3 0 1 60 80 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 6 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 6 61 80 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 31 29 3 32 3 0 1 59 79 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 5 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 6 60 79 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 34 32 3 35 3 0 0 58 78 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 4 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - g - - - ML 36 35 3 38 3 1 5 59 78 -8.072 -0.019 -6.726 -0.299 -0.299 0.324 0.167 D 37 35 3 38 3 0 0 57 77 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 4 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 4 58 77 -8.455 -0.017 -6.773 -2.005 1.688 -2.835 -1.365 D 40 38 3 41 3 0 0 56 76 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 3 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 55 - G - - MR 42 41 3 44 3 1 4 57 76 -8.455 -0.017 -6.773 -1.809 -3.064 1.771 -2.451 D 43 41 3 44 3 0 0 55 74 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 2 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 54 - G - - MR 45 44 3 47 3 1 3 56 75 -8.455 -0.017 -6.773 -1.809 -3.064 1.771 -2.451 D 46 44 3 47 3 0 0 54 73 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 2 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 53 - A - - MR 48 47 3 50 3 1 3 55 74 -8.455 -0.017 -6.773 1.762 -2.590 -2.200 -2.154 D 49 47 3 50 3 0 0 53 72 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 52 - G - - MR 51 50 3 53 3 1 2 54 73 -8.455 -0.017 -6.773 -1.809 -3.064 1.771 -2.451 D 52 50 3 53 3 0 0 52 71 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 51 - C - - MR 54 53 3 56 5 1 2 53 72 -7.188 -0.037 -7.003 -7.215 -8.107 -2.005 1.688 -2.835 -1.365 D 55 53 3 56 5 0 0 51 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 50 G C - - MP 57 56 3 61 6 2 3 52 71 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -4.956 -3.197 -5.078 0.056 -5.534 -4.776 -0.845 -5.334 -4.465 3.686 -4.787 -0.905 -1.224 -4.607 -2.894 -3.951 ML 58 56 3 61 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 49 U G - - MP 63 62 6 67 6 2 3 50 69 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -4.316 -4.245 -3.966 -0.558 -2.657 -4.354 1.635 -3.450 -4.009 -0.403 -4.278 -2.239 0.755 -4.379 3.137 -2.869 ML 64 62 6 67 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 48 U A - - MP 69 68 6 73 6 2 2 48 67 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -4.447 -4.278 -4.257 -0.555 -3.145 -4.797 1.188 -3.858 -4.259 -0.336 -4.619 -2.169 3.438 -4.588 -0.815 -3.056 ML 70 68 6 73 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 47 A U - - MP 75 74 6 79 6 2 2 46 65 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -3.989 -2.971 -3.992 3.446 -4.430 -5.513 -0.117 -4.021 -3.877 0.865 -4.434 -0.416 -0.534 -4.667 -2.057 -2.815 ML 76 74 6 79 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 46 G U - - MP 81 80 6 85 6 2 2 44 63 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -3.756 -2.484 -3.933 1.043 -4.764 -5.493 -0.343 -3.939 -3.561 1.167 -4.090 3.216 -0.698 -4.667 -2.285 -2.607 ML 82 80 6 85 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 45 C G - - MP 87 86 6 91 6 2 2 42 61 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -4.787 -4.713 -4.436 -0.925 -3.104 -4.817 3.618 -3.938 -4.494 -0.716 -4.729 -2.664 0.385 -4.840 -0.817 -3.326 ML 88 86 6 91 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 44 C G - - MP 93 92 6 97 4 2 2 40 59 -7.063 -7.270 -0.049 -5.684 -4.787 -4.713 -4.436 -0.925 -3.104 -4.817 3.618 -3.938 -4.494 -0.716 -4.729 -2.664 0.385 -4.840 -0.817 -3.326 ML 94 92 6 97 4 1 1 40 60 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 40 59 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 39 58 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 41 61 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 21 - A - - - ML 99 98 6 101 3 1 1 37 56 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 100 98 6 101 3 0 0 36 55 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 22 - C - - - ML 102 101 3 104 3 1 1 36 55 -8.072 -0.019 -6.726 -2.005 1.688 -2.835 -1.365 D 103 101 3 104 3 0 0 35 54 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 23 - G - - - ML 105 104 3 107 3 1 1 35 54 -8.455 -0.017 -6.773 -1.809 -3.064 1.771 -2.451 D 106 104 3 107 3 0 0 34 53 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 43 - G - - MR 108 107 3 110 3 1 1 34 53 -8.455 -0.017 -6.773 -1.809 -3.064 1.771 -2.451 D 109 107 3 110 3 0 0 32 52 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 42 - A - - MR 111 110 3 113 5 1 1 33 52 -7.188 -0.037 -7.003 -7.215 -8.107 1.762 -2.590 -2.200 -2.154 D 112 110 3 113 5 0 0 32 51 -5.352 -0.707 -2.978 -4.409 -2.404 IR 113 113 3 113 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 41 C G - - MP 114 113 3 118 6 2 2 32 51 -9.153 -9.092 -0.020 -7.868 -8.148 -8.543 -4.787 -4.713 -4.436 -0.925 -3.104 -4.817 3.618 -3.938 -4.494 -0.716 -4.729 -2.664 0.385 -4.840 -0.817 -3.326 ML 115 113 3 118 6 1 1 31 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 0 29 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 31 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 40 U A - - MP 120 119 6 124 4 2 2 30 49 -7.063 -7.270 -0.049 -5.684 -4.447 -4.278 -4.257 -0.555 -3.145 -4.797 1.188 -3.858 -4.259 -0.336 -4.619 -2.169 3.438 -4.588 -0.815 -3.056 ML 121 119 6 124 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - G - - - ML 126 125 6 128 3 1 1 27 46 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 127 125 6 128 3 0 0 26 45 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - A - - - ML 129 128 3 131 3 1 1 26 45 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 130 128 3 131 3 0 0 25 44 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 28 - g - - - ML 132 131 3 134 3 1 1 25 44 -2.736 -0.251 -6.726 0.219 -0.352 0.348 -0.359 D 133 131 3 134 3 0 0 23 42 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 25 44 -1.892 -0.537 -4.592 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - G - - - ML 135 134 3 137 3 1 1 23 42 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 136 134 3 137 3 0 0 22 41 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - A - - - ML 138 137 3 140 3 1 1 22 41 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 139 137 3 140 3 0 0 21 40 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - U - - - ML 141 140 3 143 3 1 1 21 40 -8.072 -0.019 -6.726 -1.687 -1.648 -2.430 1.671 D 142 140 3 143 3 0 0 20 39 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - G - - - ML 144 143 3 146 3 1 1 20 39 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 145 143 3 146 3 0 0 19 38 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - A - - - ML 147 146 3 149 3 1 1 19 37 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 148 146 3 149 3 0 0 18 37 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - U - - - ML 150 149 3 152 3 1 1 17 36 -8.072 -0.019 -6.726 -0.540 -0.952 -0.353 1.009 D 151 149 3 152 3 0 0 17 36 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 36 - G - - - ML 153 152 3 155 3 1 1 16 35 -8.072 -0.019 -6.726 -1.809 -3.064 1.771 -2.451 D 154 152 3 155 3 0 0 16 34 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 37 - A - - - ML 156 155 3 158 3 1 1 15 33 -8.072 -0.019 -6.726 1.762 -2.590 -2.200 -2.154 D 157 155 3 158 3 0 0 15 33 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 38 - u - - - ML 159 158 3 161 3 1 1 13 31 -8.072 -0.019 -6.726 0.108 -0.132 -1.109 0.628 D 160 158 3 161 3 0 0 13 32 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 39 - A - - - ML 162 161 3 164 2 1 1 1 1 * 0.000 1.762 -2.590 -2.200 -2.154 D 163 161 3 164 2 0 0 0 0 * 0.000 IL 164 164 3 164 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 165 164 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME sR34 ACC RF01273 DESC Small nucleolar RNA sR34 LENG 54 MAXL 134 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:10:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 4 EFFN 2.589844 CKSUM 674949940 STATS LOCAL MSV -8.4985 0.71923 STATS LOCAL VITERBI -8.5081 0.71923 STATS LOCAL FORWARD -3.5246 0.71923 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.27803 1.62525 1.06034 1.72476 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 0.00000 * 1 1.36282 2.70337 0.54966 2.30318 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 2 2.98780 0.17501 3.56387 2.50320 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 3 2.98780 0.17501 3.56387 2.50320 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 4 2.81936 3.71301 0.12940 3.28798 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 5 0.13661 3.35596 3.06873 3.07194 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 6 2.71992 2.66530 3.24154 0.19184 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 7 2.81936 3.71301 0.12940 3.28798 7 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 8 0.13661 3.35596 3.06873 3.07194 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 9 1.81735 1.73008 0.66028 1.94095 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 10 2.81936 3.71301 0.12940 3.28798 10 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 11 0.13661 3.35596 3.06873 3.07194 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 12 1.63067 1.59138 1.13034 1.28146 12 g - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 13 2.98780 0.17501 3.56387 2.50320 13 C - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 14 2.65946 3.35664 0.15307 3.29443 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 15 3.04574 1.63436 2.85083 0.35730 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 16 3.10403 2.00340 2.86831 0.26989 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 17 0.29684 2.91635 1.93519 2.84199 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 18 1.97316 3.01725 0.27996 2.87830 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 19 3.31365 0.21321 3.10370 2.20052 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 20 3.31265 0.21330 3.10320 2.20034 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 21 0.13661 3.35596 3.06873 3.07194 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 22 2.98780 0.17501 3.56387 2.50320 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 23 2.81936 3.71301 0.12940 3.28798 23 G - - - 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 24 3.31511 0.21307 3.10442 2.20079 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 25 3.10451 2.00343 2.86853 0.26984 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 26 2.81936 3.71301 0.12940 3.28798 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 27 0.13661 3.35596 3.06873 3.07194 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 28 1.24311 1.62675 1.11467 1.67707 28 g - - _ 1.38629 1.38629 1.38629 1.38629 0.21718 1.73521 3.97132 0.20155 1.70082 1.09861 0.40547 29 2.81936 3.71301 0.12940 3.28798 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 30 0.13661 3.35596 3.06873 3.07194 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 31 2.71992 2.66530 3.24154 0.19184 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 32 2.81936 3.71301 0.12940 3.28798 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 33 0.13661 3.35596 3.06873 3.07194 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 34 1.81967 2.10336 1.63365 0.65266 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 35 2.81936 3.71301 0.12940 3.28798 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 36 0.13661 3.35596 3.06873 3.07194 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 37 1.31417 1.47026 2.19352 0.94183 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 38 0.13661 3.35596 3.06873 3.07194 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 39 0.30545 3.05842 1.84066 2.85538 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 40 2.48543 3.28055 0.18223 3.08584 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 41 0.13661 3.35596 3.06873 3.07194 42 A - - - 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 42 2.81936 3.71301 0.12940 3.28798 43 G - - - 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 43 2.47829 3.27039 0.18407 3.07383 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 44 2.47883 3.27117 0.18393 3.07475 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 45 3.08649 2.00510 2.81374 0.27482 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 46 3.06894 2.24315 2.72759 0.24586 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 47 0.30578 3.05659 1.84043 2.85322 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 48 2.19216 3.03360 0.25009 2.78951 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 49 3.51288 0.18003 3.20372 2.36093 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 50 2.98780 0.17501 3.56387 2.50320 51 C - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 51 2.81936 3.71301 0.12940 3.28798 52 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 52 0.13661 3.35596 3.06873 3.07194 53 A - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 53 2.81936 3.71301 0.12940 3.28798 54 G - - : 1.38629 1.38629 1.38629 1.38629 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547 54 2.81936 3.71301 0.12940 3.28798 55 G - - : 1.38629 1.38629 1.38629 1.38629 0.01940 3.95229 * 1.46634 0.26236 0.00000 * //