# STOCKHOLM 1.0
#=GF ID snoR442
#=GF AC RF01232
#=GF DE Small nucleolar RNA R442
#=GF AU Eberhardt R; 0000-0001-6152-1369
#=GF GA 50.0
#=GF NC 45.1
#=GF TC 52.4
#=GF PI snoU40
#=GF SE Predicted; WAR; Eberhardt R
#=GF SS Predicted; WAR;
#=GF TP Gene; snRNA; snoRNA; CD-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 25.55 -Z 2958934 CM SEQDB
#=GF DR URL; http://snoopy.med.miyazaki-u.ac.jp/view.cgi?id=DRO30007;
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF DR SO; 0000593; C_D_box_snoRNA;
#=GF RN [1]
#=GF RM 15987805
#=GF RT Genome-wide analyses of two families of snoRNA genes from Drosophila
#=GF RT melanogaster, demonstrating the extensive utilization of introns for
#=GF RT coding of snoRNAs.
#=GF RA Huang ZP, Zhou H, He HL, Chen CL, Liang D, Qu LH
#=GF RL RNA. 2005;11:1303-1316.
#=GF WK Small_nucleolar_RNA
#=GF SQ 10

AADE01000002.1/234888-234842 UGCAAGCCUGUUGGGUGUGAUUACGGCUUGUCAUAGUUACUCUGAUU
AAEU02000439.1/170562-170607 UGCAAGCCUGUUGGGUGUGAUU-CAGCUUGUCAUAGUUACUCUGAUC
AANI01014595.1/210739-210785 UGCAAGCCAGUUGGGCGUGAAUCACGCUUGUCAUAGUUACUCUGAGA
AAPP01019597.1/125491-125536 UGCAAGCCUGUUGGGCGUGACU-UCGCUUGUCAUAGUUACUCUGAUU
AAPQ01006793.1/350792-350747 UGCAAGCCUGCUGGGUGUGACU-CCGCUUGUCAUAGUUACUCUGAUC
AAPT01018383.1/64068-64114   UGUAAGCCAGUUGGGCGUGAAUUUGGCUUGUCAUAGUUACUCUGAGA
AAPU01011132.1/61912-61958   CGCAAGCCUGUUGGGCGUGAUUUAUGCUUGUCAUAGUUACUCUGAGA
AAQB01009407.1/110311-110355 AUCAAGCCUGUUGGGUGUGAUU-UUGCU-GUCAUAGUUACUCUGAGC
AE014297.2/25689021-25689066 CGCAAGCCUGUUGGGUGUGAUU-CUGCUUGUCAUAGUUACUCUGAUC
AJ543998.1/1-46              CGCAAGCCUGUUGGGUGUGAUU-CUGCUUGUCAUAGUUACUCUGAUC
#=GC SS_cons                 :::::<<<_____>>><<<<<_.______>>>>>:::::::::::::
#=GC RF                      uGCAAgCCUGUUGGGcGUGAuU.cuGCUUgUCAUAGUUACUCUGAuc
//
