INFERNAL1/a [1.1.4 | Dec 2020] NAME snoU43 ACC RF01174 DESC Small nucleolar RNA U43 STATES 241 NODES 81 CLEN 79 W 162 ALPH RNA RF no CONS yes MAP yes DATE Fri Apr 4 07:12:18 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 11 EFFN 3.606689 CKSUM 3451105893 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.30 NC 43.90 EFP7GF -7.8159 0.71859 ECMLC 0.56105 -10.63348 0.06770 1600000 486016 0.002469 ECMGC 0.40133 -14.91510 -2.21359 1600000 65447 0.006112 ECMLI 0.45861 -9.07596 3.22526 1600000 338249 0.003548 ECMGI 0.49016 -4.99056 4.77859 1600000 48048 0.008325 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 162 246 -7.510 -7.717 -0.036 -6.131 IL 1 1 2 1 4 5 35 164 248 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 5 35 164 248 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 5 35 162 246 -5.860 -0.051 -5.860 1.399 -1.801 -0.484 -1.471 D 4 2 3 5 3 1 30 159 243 -11.551 -1.585 -0.585 IL 5 5 3 5 3 6 36 168 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 5 34 161 245 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 7 5 3 8 3 1 29 158 241 -11.551 -1.585 -0.585 IL 8 8 3 8 3 6 35 167 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 4 33 160 243 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 10 8 3 11 3 1 29 156 240 -11.551 -1.585 -0.585 IL 11 11 3 11 3 6 35 166 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 4 32 158 242 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 13 11 3 14 3 0 28 155 239 -11.551 -1.585 -0.585 IL 14 14 3 14 3 5 34 165 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 4 31 157 240 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 16 14 3 17 3 0 27 154 237 -11.551 -1.585 -0.585 IL 17 17 3 17 3 5 33 163 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 3 30 156 239 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 19 17 3 20 3 0 27 153 236 -11.551 -1.585 -0.585 IL 20 20 3 20 3 4 32 162 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 3 30 154 238 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 22 20 3 23 3 0 26 151 234 -11.551 -1.585 -0.585 IL 23 23 3 23 3 4 31 161 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - u - - - ML 24 23 3 26 3 2 29 153 236 -5.860 -0.051 -5.860 -0.319 -0.959 0.406 0.442 D 25 23 3 26 3 0 25 150 233 -11.551 -1.585 -0.585 IL 26 26 3 26 3 3 30 160 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - u - - - ML 27 26 3 29 3 1 28 152 235 -5.860 -0.201 -3.146 -0.117 -0.899 -0.225 0.754 D 28 26 3 29 3 0 25 149 232 -11.551 -1.585 -0.585 IL 29 29 3 29 3 3 30 159 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - a - - - ML 30 29 3 32 3 2 28 151 234 -2.852 -0.247 -5.714 0.928 -1.024 -1.047 0.165 D 31 29 3 32 3 0 24 148 231 -13.063 -1.286 -0.762 IL 32 32 3 32 3 3 28 151 234 -5.030 -0.045 -12.674 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - a - - - ML 33 32 3 35 3 2 27 150 233 -5.782 -0.053 -5.782 0.315 0.063 -0.875 0.222 D 34 32 3 35 3 0 23 146 229 -12.563 -2.597 -0.261 IL 35 35 3 35 3 3 28 156 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - a - - - ML 36 35 3 38 3 2 26 148 231 -3.499 -0.163 -5.782 0.896 -0.489 -0.379 -0.605 D 37 35 3 38 3 0 23 146 228 -12.563 -2.597 -0.261 IL 38 38 3 38 3 3 27 149 232 -0.975 -1.026 -12.965 0.000 0.000 0.000 0.000 [ MATL 13 ] 16 - g - - - ML 39 38 3 41 3 1 25 147 230 -2.774 -0.259 -5.782 -0.314 -0.187 0.346 0.065 D 40 38 3 41 3 0 22 145 228 -12.563 -0.579 -1.597 IL 41 41 3 41 3 2 25 147 230 -5.191 -0.040 -12.835 0.000 0.000 0.000 0.000 [ MATL 14 ] 18 - U - - - ML 42 41 3 44 3 1 24 146 229 -5.860 -0.174 -3.371 -2.247 -1.819 -2.429 1.731 D 43 41 3 44 3 0 21 144 226 -11.551 -1.585 -0.585 IL 44 44 3 44 3 2 26 153 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 19 - a - - - ML 45 44 3 47 3 1 24 145 227 -5.740 -0.055 -5.740 0.652 -0.985 -1.016 0.516 D 46 44 3 47 3 0 20 143 225 -12.894 -0.440 -1.928 IL 47 47 3 47 3 1 25 151 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 20 - a - - - ML 48 47 3 50 3 1 23 144 226 -5.860 -0.051 -5.860 0.412 -0.930 0.155 0.045 D 49 47 3 50 3 0 18 140 223 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 24 150 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 21 - A - - - ML 51 50 3 53 3 1 22 142 225 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 52 50 3 53 3 0 17 139 221 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 24 149 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 22 - A - - - ML 54 53 3 56 3 1 21 141 223 -5.860 -0.051 -5.860 1.301 -1.358 -1.421 -0.372 D 55 53 3 56 3 0 17 138 220 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 23 148 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - a - - - ML 57 56 3 59 3 1 21 140 222 -5.860 -0.051 -5.860 0.344 -0.419 -0.312 0.235 D 58 56 3 59 3 0 16 137 218 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 22 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 24 - a - - - ML 60 59 3 62 3 1 20 138 220 -5.860 -0.051 -5.860 0.488 -0.902 -0.088 0.165 D 61 59 3 62 3 0 15 135 217 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 22 145 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - U - - - ML 63 62 3 65 3 1 19 137 219 -5.860 -0.051 -5.860 -0.106 -1.157 -1.291 1.147 D 64 62 3 65 3 0 15 134 215 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 21 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - U - - - ML 66 65 3 68 3 1 18 136 217 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 67 65 3 68 3 0 14 133 214 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 20 142 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - U - - - ML 69 68 3 71 3 1 18 134 216 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 70 68 3 71 3 0 13 131 213 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 19 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - A - - - ML 72 71 3 74 3 1 17 133 214 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 73 71 3 74 3 0 13 130 211 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 19 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - U - - - ML 75 74 3 77 3 1 16 132 213 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 76 74 3 77 3 0 12 129 210 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 18 139 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - G - - - ML 78 77 3 80 3 1 15 131 212 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 79 77 3 80 3 0 11 127 208 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 17 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - G - - - ML 81 80 3 83 3 1 15 129 210 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 82 80 3 83 3 0 11 126 207 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 16 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - U - - - ML 84 83 3 86 3 1 14 128 209 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 85 83 3 86 3 0 10 125 205 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 15 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 33 - U - - - ML 87 86 3 89 3 1 13 127 207 -5.860 -0.148 -3.641 -2.247 -1.819 -2.429 1.731 D 88 86 3 89 3 0 9 123 203 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 15 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 34 - A - - - ML 90 89 3 92 3 1 13 125 206 -5.766 -0.054 -5.766 1.277 -1.278 -1.319 -0.389 D 91 89 3 92 3 0 9 121 201 -12.701 -2.735 -0.235 IL 92 92 3 92 3 1 14 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 35 - G - - - ML 93 92 3 95 3 1 12 124 204 -5.766 -0.054 -5.766 -1.257 -1.759 1.436 -0.783 D 94 92 3 95 3 0 9 120 200 -12.701 -2.735 -0.235 IL 95 95 3 95 3 1 14 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 36 - A - - - ML 96 95 3 98 3 1 11 123 203 -5.766 -0.054 -5.766 1.796 -2.681 -2.411 -2.452 D 97 95 3 98 3 0 8 120 200 -12.701 -2.735 -0.235 IL 98 98 3 98 3 1 13 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - A - - - ML 99 98 3 101 3 1 10 121 201 -5.766 -0.141 -3.748 1.342 -1.350 -1.391 -0.532 D 100 98 3 101 3 0 8 119 199 -12.701 -0.516 -1.735 IL 101 101 3 101 3 1 12 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - c - - - ML 102 101 3 104 3 1 10 120 200 -5.782 -0.053 -5.782 -0.132 0.835 -1.106 -0.253 D 103 101 3 104 3 0 7 118 197 -12.563 -0.579 -1.597 IL 104 104 3 104 3 1 11 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - A - - - ML 105 104 3 107 3 1 9 119 198 -5.860 -0.152 -3.594 1.034 -0.573 -1.079 -0.310 D 106 104 3 107 3 0 5 115 195 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 11 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - c - - - ML 108 107 3 110 3 1 8 117 197 -5.762 -0.054 -5.762 -0.352 0.807 -1.095 -0.001 D 109 107 3 110 3 0 5 114 193 -12.733 -2.768 -0.229 IL 110 110 3 110 3 1 10 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - A - - - ML 111 110 3 113 3 1 8 116 195 -5.762 -0.218 -3.038 1.129 -1.490 0.006 -1.144 D 112 110 3 113 3 0 5 113 192 -12.733 -2.768 -0.229 IL 113 113 3 113 3 1 9 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 42 - u - - - ML 114 113 3 116 3 1 7 115 194 -5.604 -0.061 -5.604 -0.033 -0.235 -0.813 0.682 D 115 113 3 116 3 0 4 113 192 -13.600 -0.253 -2.634 IL 116 116 3 116 3 1 9 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 43 - a - - - ML 117 116 3 119 3 1 7 113 192 -5.860 -0.051 -5.860 0.861 0.294 -1.280 -0.874 D 118 116 3 119 3 0 2 110 189 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 8 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 44 - U - - - ML 120 119 3 122 3 1 6 112 191 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 121 119 3 122 3 0 1 109 187 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 7 119 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - G - - - ML 123 122 3 125 3 1 5 111 189 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 124 122 3 125 3 0 1 107 186 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 7 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - A - - - ML 126 125 3 128 3 1 4 109 188 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 127 125 3 128 3 0 0 106 184 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 6 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - u - - - ML 129 128 3 131 3 1 4 108 186 -5.860 -0.051 -5.860 0.287 -1.090 -1.164 0.898 D 130 128 3 131 3 0 0 105 183 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 5 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - u - - - ML 132 131 3 134 3 1 3 106 185 -5.860 -0.051 -5.860 -0.545 -0.173 -1.146 0.982 D 133 131 3 134 3 0 0 104 181 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 4 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - A - - - ML 135 134 3 137 3 1 2 105 183 -5.860 -0.174 -3.371 1.301 -1.358 -1.421 -0.372 D 136 134 3 137 3 0 0 103 180 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 4 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - A - - - ML 138 137 3 140 3 1 2 104 181 -3.599 -0.154 -5.740 1.786 -2.615 -2.347 -2.383 D 139 137 3 140 3 0 0 102 180 -12.894 -0.440 -1.928 IL 140 140 3 140 3 1 3 104 181 -4.199 -0.081 -11.843 0.000 0.000 0.000 0.000 [ MATL 47 ] 52 - C - - - ML 141 140 3 143 3 1 2 103 180 -5.860 -0.051 -5.860 -1.966 1.506 -2.194 -0.547 D 142 140 3 143 3 0 0 99 177 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 3 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 53 - C - - - ML 144 143 3 146 3 1 2 101 179 -5.860 -0.051 -5.860 -1.948 1.494 -2.175 -0.510 D 145 143 3 146 3 0 0 98 175 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 3 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 54 - g - - - ML 147 146 3 149 3 1 1 100 177 -5.860 -0.051 -5.860 -0.471 -1.177 0.907 -0.057 D 148 146 3 149 3 0 0 97 173 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 2 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 55 - U - - - ML 150 149 3 152 3 1 1 98 176 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 151 149 3 152 3 0 0 95 172 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 2 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 56 - G - - - ML 153 152 3 155 3 1 1 97 174 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 154 152 3 155 3 0 0 94 170 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 2 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 57 - A - - - ML 156 155 3 158 3 1 1 96 172 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 157 155 3 158 3 0 0 92 169 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 58 - U - - - ML 159 158 3 161 3 1 1 94 171 -5.860 -0.051 -5.860 -0.983 -0.515 -0.596 1.093 D 160 158 3 161 3 0 0 91 167 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 59 - u - - - ML 162 161 3 164 3 1 1 93 169 -5.860 -0.051 -5.860 -1.054 -1.145 0.094 0.999 D 163 161 3 164 3 0 0 89 165 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 60 - A - - - ML 165 164 3 167 3 1 1 91 167 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 166 164 3 167 3 0 0 88 164 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 61 - U - - - ML 168 167 3 170 3 1 1 90 166 -2.841 -0.246 -5.860 -0.381 -1.225 -1.418 1.281 D 169 167 3 170 3 0 0 86 162 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 2 91 167 -0.986 -1.014 -13.821 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - c - - - ML 171 170 3 173 3 1 1 88 164 -1.643 -0.594 -5.860 0.054 0.768 -1.122 -0.323 D 172 170 3 173 3 0 0 84 160 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 2 89 165 -0.902 -1.105 -15.212 0.000 0.000 0.000 0.000 [ MATL 58 ] 69 - U - - - ML 174 173 3 176 3 1 1 86 162 -5.860 -0.051 -5.860 -0.069 -1.148 -1.276 1.126 D 175 173 3 176 3 0 0 83 158 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 70 - u - - - ML 177 176 3 179 3 1 1 85 160 -5.860 -0.051 -5.860 0.096 -0.374 -0.959 0.718 D 178 176 3 179 3 0 0 81 157 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 71 - a - - - ML 180 179 3 182 3 1 1 83 159 -5.860 -0.051 -5.860 0.795 -1.098 -1.141 0.426 D 181 179 3 182 3 0 0 80 155 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 72 - a - - - ML 183 182 3 185 3 1 1 82 157 -5.860 -0.051 -5.860 0.959 -1.140 -1.184 0.218 D 184 182 3 185 3 0 0 78 153 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 73 - C - - - ML 186 185 3 188 3 1 1 80 155 -5.860 -0.051 -5.860 -2.514 1.761 -2.744 -1.804 D 187 185 3 188 3 0 0 77 151 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 74 - U - - - ML 189 188 3 191 3 1 1 79 153 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 190 188 3 191 3 0 0 75 149 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 75 - A - - - ML 192 191 3 194 3 1 1 77 152 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 193 191 3 194 3 0 0 73 147 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 76 - G - - - ML 195 194 3 197 3 1 1 76 150 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 196 194 3 197 3 0 0 72 146 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 77 - G - - - ML 198 197 3 200 3 1 1 74 148 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 199 197 3 200 3 0 0 70 144 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 78 - G - - - ML 201 200 3 203 3 1 1 72 146 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 202 200 3 203 3 0 0 68 142 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 79 - C - - - ML 204 203 3 206 3 1 1 71 144 -5.860 -0.051 -5.860 -2.514 1.761 -2.744 -1.804 D 205 203 3 206 3 0 0 67 140 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 79 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 80 - G - - - ML 207 206 3 209 3 1 1 69 142 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 208 206 3 209 3 0 0 65 137 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 81 - G - - - ML 210 209 3 212 3 1 1 67 140 -5.860 -0.051 -5.860 -0.683 -2.293 1.544 -1.958 D 211 209 3 212 3 0 0 63 135 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 82 - a - - - ML 213 212 3 215 3 1 1 65 138 -5.860 -0.051 -5.860 0.959 -1.140 -1.184 0.218 D 214 212 3 215 3 0 0 61 133 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 83 - C - - - ML 216 215 3 218 3 1 1 63 135 -5.860 -0.051 -5.860 -2.514 1.761 -2.744 -1.804 D 217 215 3 218 3 0 0 59 130 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 84 - U - - - ML 219 218 3 221 3 1 1 61 133 -5.860 -0.051 -5.860 -2.247 -1.819 -2.429 1.731 D 220 218 3 221 3 0 0 57 128 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 71 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 85 - G - - - ML 222 221 3 224 3 1 1 59 131 -5.860 -0.051 -5.860 -2.175 -3.105 1.816 -2.829 D 223 221 3 224 3 0 0 55 125 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 70 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 86 - A - - - ML 225 224 3 227 3 1 1 57 128 -5.860 -0.051 -5.860 1.830 -2.927 -2.644 -2.706 D 226 224 3 227 3 0 0 52 122 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 87 - u - - - ML 228 227 3 230 3 1 1 55 125 -5.860 -0.051 -5.860 -1.429 0.561 -1.617 0.870 D 229 227 3 230 3 0 0 49 118 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 88 - U - - - ML 231 230 3 233 3 1 1 52 122 -5.860 -0.051 -5.860 -0.506 -0.363 -1.157 1.050 D 232 230 3 233 3 0 0 44 113 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 89 - u - - - ML 234 233 3 236 3 1 1 48 117 -5.860 -0.051 -5.860 0.381 -0.581 -0.951 0.597 D 235 233 3 236 3 0 0 32 101 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 90 - a - - - ML 237 236 3 239 2 1 1 1 1 * 0.000 0.340 -0.912 0.106 0.172 D 238 236 3 239 2 0 0 0 0 * 0.000 IL 239 239 3 239 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 80 ] - - - - - - E 240 239 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME snoU43 ACC RF01174 DESC Small nucleolar RNA U43 LENG 79 MAXL 162 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Fri Apr 4 07:12:18 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 11 EFFN 3.606689 STATS LOCAL MSV -9.1960 0.71859 STATS LOCAL VITERBI -9.6670 0.71859 STATS LOCAL FORWARD -3.2219 0.71859 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.19473 1.80595 1.44278 1.21528 1.38629 1.38629 1.38629 1.38629 0.02039 5.20552 4.22034 0.39730 1.11515 0.00000 * 1 0.41654 2.63468 1.72188 2.40567 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 2 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 3 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 4 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 5 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 6 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 7 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 8 1.60747 2.05069 1.10456 1.07998 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 9 1.46742 2.00964 1.54213 0.86389 - u - - : 1.38629 1.38629 1.38629 1.38629 0.13946 4.06160 2.18078 1.46634 0.26236 1.09861 0.40547 10 0.74278 2.09625 2.11189 1.27195 - a - - : 1.38629 1.38629 1.38629 1.38629 0.17146 1.97674 3.96097 0.03109 3.48636 0.89143 0.52775 11 1.16802 1.34258 1.99264 1.23267 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03703 4.00766 4.00766 1.46634 0.26236 1.79992 0.18070 12 0.76521 1.72528 1.64886 1.80563 - a - - : 1.38629 1.38629 1.38629 1.38629 0.11277 2.42509 4.00766 0.71081 0.67579 1.79992 0.18070 13 1.60418 1.51617 1.14622 1.34110 - g - - : 1.38629 1.38629 1.38629 1.38629 0.17962 1.92252 4.00766 0.02776 3.59809 0.40141 1.10677 14 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.12088 4.06160 2.33676 1.46634 0.26236 1.09861 0.40547 15 0.93463 2.06921 2.09079 1.02891 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03813 3.97885 3.97885 1.46634 0.26236 0.30484 1.33652 16 1.10094 2.03078 1.27895 1.35527 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 17 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 18 0.48466 2.32732 2.37146 1.64408 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 19 1.14773 1.67677 1.60249 1.22325 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 20 1.04780 2.01159 1.44739 1.27178 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 21 1.46009 2.18804 2.28105 0.59154 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 22 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 23 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 24 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 25 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 26 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 27 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 28 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 29 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.10247 4.06160 2.52351 1.46634 0.26236 1.09861 0.40547 30 0.50128 2.27194 2.30024 1.65600 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03745 3.99657 3.99657 1.46634 0.26236 1.89547 0.16281 31 2.25736 2.60520 0.39121 1.92930 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03745 3.99657 3.99657 1.46634 0.26236 1.89547 0.16281 32 0.14121 3.24476 3.05734 3.08556 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03745 3.99657 3.99657 1.46634 0.26236 1.89547 0.16281 33 0.45624 2.32207 2.35042 1.75483 - A - - : 1.38629 1.38629 1.38629 1.38629 0.09739 3.99657 2.59806 1.46634 0.26236 0.35738 1.20232 34 1.47785 0.80772 2.15284 1.56140 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03703 4.00766 4.00766 1.46634 0.26236 0.40141 1.10677 35 0.66966 1.78315 2.13437 1.60102 - A - - : 1.38629 1.38629 1.38629 1.38629 0.10541 4.06160 2.49107 1.46634 0.26236 1.09861 0.40547 36 1.63048 0.82696 2.14551 1.38719 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03756 3.99375 3.99375 1.46634 0.26236 1.91827 0.15883 37 0.60358 2.41936 1.38220 2.17906 - A - - : 1.38629 1.38629 1.38629 1.38629 0.15108 3.99375 2.10544 1.46634 0.26236 1.91827 0.15883 38 1.40937 1.54909 1.95001 0.91382 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04198 3.88464 3.88464 1.46634 0.26236 0.17562 1.82595 39 0.78950 1.18237 2.27323 1.99220 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 40 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 41 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 42 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 43 1.18720 2.14184 2.19294 0.76379 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 44 1.76386 1.50612 2.18046 0.70550 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 45 0.48466 2.32732 2.37146 1.64408 - A - - : 1.38629 1.38629 1.38629 1.38629 0.12088 4.06160 2.33676 1.46634 0.26236 1.09861 0.40547 46 0.14838 3.19861 3.01306 3.03782 - A - - : 1.38629 1.38629 1.38629 1.38629 0.10673 2.49463 3.97885 0.05601 2.91004 0.30484 1.33652 47 2.74874 0.34214 2.90679 1.76556 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 48 2.73684 0.35047 2.89396 1.74004 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 49 1.71253 2.20230 0.75769 1.42589 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 50 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 51 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 52 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 53 2.06741 1.74319 1.79936 0.62901 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 54 2.11684 2.17986 1.32117 0.69373 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 55 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 56 1.65008 2.23552 2.36893 0.49849 - U - - : 1.38629 1.38629 1.38629 1.38629 0.17053 1.96924 4.06160 0.70287 0.68352 1.09861 0.40547 57 1.34905 0.85371 2.16418 1.61025 - c - - : 1.38629 1.38629 1.38629 1.38629 0.41153 1.13898 4.06160 0.76576 0.62546 1.09861 0.40547 58 1.43396 2.18232 2.27043 0.60589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 59 1.31983 1.64545 2.05085 0.88851 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 60 0.83493 2.14746 2.17689 1.09087 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 61 0.72184 2.17650 2.20722 1.23546 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 62 3.12864 0.16570 3.28798 2.63679 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 63 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 64 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 65 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 66 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 67 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 68 3.12864 0.16570 3.28798 2.63679 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 69 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 70 1.86006 2.97560 0.31609 2.74375 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 71 0.72184 2.17650 2.20722 1.23546 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 72 3.12864 0.16570 3.28798 2.63679 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 73 2.94371 2.64702 3.06977 0.18629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 74 2.89408 3.53848 0.12737 3.34715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 75 0.11785 3.41546 3.21881 3.26220 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 76 2.37676 0.99760 2.50699 0.78335 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 77 1.73723 1.63786 2.18800 0.65883 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 78 1.12255 1.78933 2.04556 0.97241 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03505 4.06160 4.06160 1.46634 0.26236 1.09861 0.40547 79 1.15089 2.01820 1.31268 1.26709 - a - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //