INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD107 ACC RF01164 DESC Small nucleolar RNA SNORD107 STATES 226 NODES 72 CLEN 74 W 91 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 01:22:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01164/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 13 EFFN 2.028076 CKSUM 3329916449 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 52.20 NC 47.80 EFP7GF -8.0303 0.71871 ECMLC 0.65036 -5.58896 3.22772 1600000 371056 0.003234 ECMGC 0.36860 -15.97906 -1.11797 1600000 95722 0.004179 ECMLI 0.59417 -4.33342 4.95993 1600000 300101 0.003999 ECMGI 0.40666 -9.34179 3.35650 1600000 69939 0.005719 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 91 112 -9.123 -9.062 -0.021 -7.839 -8.118 -8.513 IL 1 1 2 1 6 1 28 93 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 28 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 76 G C - - MP 3 2 3 7 6 2 31 92 112 -9.123 -9.062 -0.021 -7.839 -8.118 -8.513 -4.818 -3.130 -4.925 0.149 -5.340 -4.724 -0.686 -5.173 -4.378 3.656 -4.709 -0.832 -1.069 -4.518 -2.727 -3.800 ML 4 2 3 7 6 1 26 90 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 25 90 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 21 87 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 27 91 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 28 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 75 a u - - MP 9 8 6 13 6 2 29 90 110 -9.123 -9.062 -0.021 -7.839 -8.118 -8.513 -2.617 -1.998 -2.804 1.984 -2.984 -3.571 0.835 -3.051 -2.738 1.715 -1.137 1.604 0.583 -2.936 -0.901 -1.832 ML 10 8 6 13 6 1 25 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 24 88 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 20 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 27 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 27 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 74 U A - - MP 15 14 6 19 6 2 28 88 108 -9.123 -9.062 -0.021 -7.839 -8.118 -8.513 -4.280 -4.108 -4.109 -0.396 -3.031 -4.665 1.299 -3.733 -4.113 -0.155 -4.481 -2.004 3.369 -4.428 -0.705 -2.928 ML 16 14 6 19 6 1 24 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 22 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 25 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 25 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 73 U A - - MP 21 20 6 25 4 2 26 85 106 -6.988 -7.195 -0.052 -5.609 -4.280 -4.108 -4.109 -0.396 -3.031 -4.665 1.299 -3.733 -4.113 -0.155 -4.481 -2.004 3.369 -4.428 -0.705 -2.928 ML 22 20 6 25 4 1 23 86 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 21 85 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 19 84 105 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 25 87 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 24 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - c - - - ML 27 26 6 29 3 1 24 83 104 -8.001 -0.020 -6.655 -0.473 0.906 -1.460 0.060 D 28 26 6 29 3 0 19 82 102 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 23 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 30 29 3 32 3 1 24 82 103 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 31 29 3 32 3 0 18 81 101 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 23 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 23 81 102 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 34 32 3 35 3 0 17 80 100 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 22 80 101 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 37 35 3 38 3 0 16 79 99 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 21 79 99 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 40 38 3 41 3 0 16 78 98 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 21 78 98 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 43 41 3 44 3 0 15 77 97 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 20 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 45 44 3 47 3 1 20 77 97 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 46 44 3 47 3 0 14 76 96 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 19 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 48 47 3 50 3 1 19 76 96 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 49 47 3 50 3 0 13 74 95 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 51 50 3 53 3 1 18 75 95 -8.001 -0.020 -6.655 -0.931 1.058 -1.747 0.131 D 52 50 3 53 3 0 13 73 94 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 54 53 3 56 3 1 18 74 94 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 55 53 3 56 3 0 12 72 93 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 17 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - c - - - ML 57 56 3 59 3 1 17 73 93 -8.001 -0.020 -6.655 -0.761 0.678 -1.555 0.555 D 58 56 3 59 3 0 11 71 92 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 16 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 60 59 3 62 3 1 16 72 92 -8.001 -0.020 -6.655 1.051 -1.079 -0.751 -0.217 D 61 59 3 62 3 0 11 70 91 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - G - - - ML 63 62 3 65 3 1 16 71 91 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 64 62 3 65 3 0 10 69 90 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - G - - - ML 66 65 3 68 3 1 15 70 90 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 67 65 3 68 3 0 9 68 89 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 69 68 3 71 3 1 14 69 89 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 70 68 3 71 3 0 9 67 88 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 72 71 3 74 3 1 14 68 88 -8.001 -0.020 -6.655 -1.832 1.648 -2.658 -1.227 D 73 71 3 74 3 0 8 66 86 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - C - - - ML 75 74 3 77 3 1 13 67 87 -8.001 -0.020 -6.655 -1.832 1.648 -2.658 -1.227 D 76 74 3 77 3 0 7 65 85 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 78 77 3 80 3 1 12 66 86 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 79 77 3 80 3 0 7 64 84 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 11 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 81 80 3 83 3 1 12 65 85 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 82 80 3 83 3 0 6 63 83 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 10 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 84 83 3 86 3 1 11 64 84 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 85 83 3 86 3 0 5 62 82 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 10 65 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 87 86 3 89 3 1 10 63 83 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 88 86 3 89 3 0 5 61 81 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 9 64 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 90 89 3 92 3 1 10 61 81 -8.001 -0.020 -6.655 -0.519 1.060 -1.564 -0.187 D 91 89 3 92 3 0 4 60 80 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 8 63 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 93 92 3 95 3 1 9 60 80 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 94 92 3 95 3 0 4 59 79 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 8 62 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 96 95 3 98 3 1 9 59 79 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 97 95 3 98 3 0 3 58 78 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - A - - - ML 99 98 3 101 3 1 8 58 78 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 100 98 3 101 3 0 2 57 77 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 7 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 102 101 3 104 3 1 7 57 77 -8.001 -0.020 -6.655 1.435 -1.185 -1.431 -1.041 D 103 101 3 104 3 0 2 56 76 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - u - - - ML 105 104 3 107 3 1 7 56 76 -8.001 -0.020 -6.655 0.025 0.279 -1.127 0.391 D 106 104 3 107 3 0 1 55 75 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - A - - - ML 108 107 3 110 3 1 6 55 75 -4.699 -0.072 -6.655 1.442 -1.552 -1.472 -0.784 D 109 107 3 110 3 0 1 53 73 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 5 56 76 -1.556 -0.719 -4.256 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - u - - - ML 111 110 3 113 3 1 6 54 74 -8.001 -0.020 -6.655 -0.042 -0.575 -1.188 0.940 D 112 110 3 113 3 0 0 52 72 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 4 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 114 113 3 116 3 1 5 53 73 -8.001 -0.020 -6.655 1.228 -0.962 -0.881 -0.736 D 115 113 3 116 3 0 0 51 71 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 4 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - A - - - ML 117 116 3 119 3 1 4 52 71 -8.001 -0.020 -6.655 1.135 -0.988 -0.573 -0.674 D 118 116 3 119 3 0 0 50 70 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 3 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - U - - - ML 120 119 3 122 3 1 4 51 70 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 121 119 3 122 3 0 0 49 69 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 3 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 123 122 3 125 3 1 3 50 69 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 124 122 3 125 3 0 0 48 68 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 2 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - A - - - ML 126 125 3 128 3 1 2 49 68 -8.001 -0.069 -4.545 1.735 -2.447 -2.071 -1.996 D 127 125 3 128 3 0 0 47 67 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 2 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - U - - - ML 129 128 3 131 3 1 3 48 67 -7.953 -0.021 -6.607 -1.001 -0.703 -1.735 1.371 D 130 128 3 131 3 0 0 46 66 -6.566 -1.075 -0.958 IL 131 131 3 131 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 132 131 3 134 3 1 2 47 66 -8.001 -0.020 -6.655 -0.183 -0.550 -1.248 1.011 D 133 131 3 134 3 0 0 45 65 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - U - - - ML 135 134 3 137 3 1 2 45 65 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 136 134 3 137 3 0 0 44 64 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - C - - - ML 138 137 3 140 3 1 2 44 64 -8.001 -0.020 -6.655 -1.308 1.406 -2.135 -0.477 D 139 137 3 140 3 0 0 43 63 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - A - - - ML 141 140 3 143 3 1 1 43 63 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 142 140 3 143 3 0 0 42 62 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - A - - - ML 144 143 3 146 3 1 1 42 62 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 145 143 3 146 3 0 0 41 61 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - A - - - ML 147 146 3 149 3 1 1 41 61 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 148 146 3 149 3 0 0 40 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 150 149 3 152 3 1 1 40 60 -8.001 -0.020 -6.655 1.448 -1.224 -1.447 -1.068 D 151 149 3 152 3 0 0 39 58 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - u - - - ML 153 152 3 155 3 1 1 39 58 -8.001 -0.020 -6.655 -0.154 -0.303 -1.199 0.891 D 154 152 3 155 3 0 0 38 57 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - U - - - ML 156 155 3 158 3 1 1 38 57 -8.001 -0.020 -6.655 -0.577 -1.044 -1.565 1.326 D 157 155 3 158 3 0 0 37 56 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - U - - - ML 159 158 3 161 3 1 1 37 56 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 160 158 3 161 3 0 0 36 55 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - G - - - ML 162 161 3 164 3 1 1 36 55 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 163 161 3 164 3 0 0 35 54 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - A - - - ML 165 164 3 167 3 1 1 35 54 -8.001 -0.020 -6.655 1.735 -2.447 -2.071 -1.996 D 166 164 3 167 3 0 0 34 53 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - G - - - ML 168 167 3 170 3 1 1 34 53 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 169 167 3 170 3 0 0 32 52 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - C - - - ML 171 170 3 173 3 1 1 33 52 -8.001 -0.020 -6.655 -1.832 1.648 -2.658 -1.227 D 172 170 3 173 3 0 0 31 51 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - U - - - ML 174 173 3 176 3 1 1 32 51 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 175 173 3 176 3 0 0 30 50 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - U - - - ML 177 176 3 179 3 1 1 30 50 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 178 176 3 179 3 0 0 29 48 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - A - - - ML 180 179 3 182 3 1 1 29 48 -8.001 -0.087 -4.192 1.473 -1.775 -0.940 -1.283 D 181 179 3 182 3 0 0 28 47 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - A - - - ML 183 182 3 185 3 1 1 28 47 -7.935 -0.225 -2.834 1.069 -1.394 -0.060 -0.832 D 184 182 3 185 3 0 0 27 46 -6.685 -2.198 -0.373 IL 185 185 3 185 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - A - - - ML 186 185 3 188 3 1 1 27 46 -2.317 -0.443 -3.979 1.599 -1.915 -1.593 -1.416 D 187 185 3 188 3 0 0 26 45 -2.504 -1.320 -1.241 IL 188 188 3 188 3 1 1 27 46 -2.027 -0.598 -3.415 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - A - - - ML 189 188 3 191 3 1 1 26 45 -7.812 -0.023 -6.466 1.318 -1.312 -1.240 -0.553 D 190 188 3 191 3 0 0 24 43 -7.289 -1.747 -0.523 IL 191 191 3 191 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - u - - - ML 192 191 3 194 3 1 1 25 43 -7.869 -0.095 -4.066 -0.448 -0.329 -0.876 0.946 D 193 191 3 194 3 0 0 23 42 -7.047 -0.682 -1.438 IL 194 194 3 194 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - g - - - ML 195 194 3 197 3 1 1 23 42 -7.936 -0.021 -6.590 0.055 -0.490 0.400 -0.105 D 196 194 3 197 3 0 0 22 41 -6.683 -2.196 -0.373 IL 197 197 3 197 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - A - - - ML 198 197 3 200 3 1 1 22 41 -7.936 -0.021 -6.590 1.173 -1.160 -1.183 -0.221 D 199 197 3 200 3 0 0 21 40 -6.683 -2.196 -0.373 IL 200 200 3 200 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 65 - c - - - ML 201 200 3 203 3 1 1 21 40 -7.936 -0.021 -6.590 -0.354 0.408 -0.592 0.296 D 202 200 3 203 3 0 0 20 39 -6.683 -0.956 -1.074 IL 203 203 3 203 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 66 - A - - - ML 204 203 3 206 3 1 1 20 39 -8.001 -0.096 -4.053 1.471 -1.608 -1.511 -0.865 D 205 203 3 206 3 0 0 19 38 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 67 - c - - - ML 207 206 3 209 3 1 1 19 37 -7.927 -0.021 -6.581 -0.472 0.660 -0.940 0.236 D 208 206 3 209 3 0 0 18 36 -6.737 -2.250 -0.358 IL 209 209 3 209 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 68 - U - - - ML 210 209 3 212 3 1 1 18 36 -7.927 -0.021 -6.581 -0.187 -0.884 -1.298 1.120 D 211 209 3 212 3 0 0 17 35 -6.737 -0.907 -1.129 IL 212 212 3 212 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 69 - C - - - ML 213 212 3 215 3 1 1 16 35 -8.001 -0.020 -6.655 -1.832 1.648 -2.658 -1.227 D 214 212 3 215 3 0 0 16 34 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - U - - - ML 216 215 3 218 3 1 1 15 33 -8.001 -0.020 -6.655 -1.555 -1.539 -2.292 1.637 D 217 215 3 218 3 0 0 15 33 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - G - - - ML 219 218 3 221 3 1 1 13 31 -8.001 -0.020 -6.655 -1.660 -2.892 1.741 -2.279 D 220 218 3 221 3 0 0 13 32 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 72 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.735 -2.447 -2.071 -1.996 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD107 ACC RF01164 DESC Small nucleolar RNA SNORD107 LENG 74 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 01:22:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01164/CM NSEQ 13 EFFN 2.180420 CKSUM 3329916449 STATS LOCAL MSV -8.8583 0.71871 STATS LOCAL VITERBI -9.5536 0.71871 STATS LOCAL FORWARD -3.4470 0.71871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.12178 1.71932 1.56324 1.25297 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 0.00000 * 1 2.55367 3.18044 0.17802 3.13007 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 2 1.24586 2.06181 0.82670 1.91329 2 g - - < 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 3 2.89318 1.83910 2.62722 0.33777 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 4 2.88900 1.83893 2.62546 0.33831 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 5 1.73699 0.73773 2.43330 1.35477 5 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 6 0.16888 3.16013 2.89202 2.85590 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 7 2.53606 2.51268 3.05033 0.23265 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 8 2.61838 3.48470 0.16306 3.06018 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 9 0.16888 3.16013 2.89202 2.85590 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 10 2.53606 2.51268 3.05033 0.23265 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 11 2.61838 3.48470 0.16306 3.06018 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 12 0.16888 3.16013 2.89202 2.85590 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 13 2.07364 0.63103 2.64430 1.30500 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 14 0.16888 3.16013 2.89202 2.85590 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 15 1.94721 0.89845 2.50194 0.99913 15 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 16 0.64595 2.15440 1.91883 1.54607 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 17 2.61838 3.48470 0.16306 3.06018 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 18 2.61838 3.48470 0.16306 3.06018 18 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 19 0.16888 3.16013 2.89202 2.85590 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 20 2.75032 0.22180 3.32516 2.31214 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 21 2.75032 0.22180 3.32516 2.31214 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 22 2.53606 2.51268 3.05033 0.23265 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 23 2.53606 2.51268 3.05033 0.23265 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 24 2.61838 3.48470 0.16306 3.06018 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 25 2.53606 2.51268 3.05033 0.23265 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 26 1.77185 0.62872 2.51118 1.53463 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 27 2.53606 2.51268 3.05033 0.23265 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 28 2.61838 3.48470 0.16306 3.06018 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 29 0.16888 3.16013 2.89202 2.85590 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 30 0.37531 2.22900 2.41863 2.15205 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 31 1.37390 1.18023 2.18742 1.11637 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 32 0.37068 2.49986 2.44758 1.95802 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.07995 2.85697 3.94252 0.57713 0.82441 1.09861 0.40547 33 1.42138 1.79628 2.23188 0.72283 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 34 0.52010 2.06677 2.01493 1.92677 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 35 0.58589 2.08565 1.79136 1.88104 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 36 2.53606 2.51268 3.05033 0.23265 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 37 2.61838 3.48470 0.16306 3.06018 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 38 0.16888 3.16013 2.89202 2.85590 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.07798 3.94252 2.88933 1.46634 0.26236 1.09861 0.40547 39 2.12451 1.89340 2.63500 0.41820 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90563 3.90563 1.46634 0.26236 0.52924 0.88929 40 1.52386 1.77817 2.27604 0.67238 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 41 2.53606 2.51268 3.05033 0.23265 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 42 2.35533 0.38828 2.93299 1.75054 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 43 0.16888 3.16013 2.89202 2.85590 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 44 0.16888 3.16013 2.89202 2.85590 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 45 0.16888 3.16013 2.89202 2.85590 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 46 0.36622 2.25721 2.43044 2.17145 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 47 1.50165 1.59848 2.23886 0.75831 48 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 48 1.81336 2.14456 2.51344 0.44819 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 49 2.53606 2.51268 3.05033 0.23265 50 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 50 2.61838 3.48470 0.16306 3.06018 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 51 0.16888 3.16013 2.89202 2.85590 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 52 2.61838 3.48470 0.16306 3.06018 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 53 2.75032 0.22180 3.32516 2.31214 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 54 2.53606 2.51268 3.05033 0.23265 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 55 2.53606 2.51268 3.05033 0.23265 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 56 0.34989 2.66281 2.05643 2.32716 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09220 3.94252 2.67832 1.46634 0.26236 1.09861 0.40547 57 0.63221 2.38542 1.42324 1.99804 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.13927 3.89198 2.21093 1.46634 0.26236 1.71204 0.19906 58 0.25933 2.77506 2.54558 2.43428 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.30296 1.68941 2.56731 0.22719 1.59343 0.61264 0.78071 59 0.45726 2.32522 2.27740 1.79174 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04388 3.84123 3.84123 1.46634 0.26236 2.07515 0.13415 60 1.71803 1.61850 2.00588 0.71776 62 u - - _ 1.38629 1.38629 1.38629 1.38629 0.10220 3.84123 2.58121 1.46634 0.26236 0.28912 1.38201 61 1.35640 1.72914 1.09347 1.47000 63 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04165 3.89229 3.89229 1.46634 0.26236 1.70937 0.19965 62 0.55934 2.21513 2.23429 1.55020 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04165 3.89229 3.89229 1.46634 0.26236 1.70937 0.19965 63 1.64905 1.08920 1.80025 1.18409 65 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04165 3.89229 3.89229 1.46634 0.26236 0.44935 1.01623 64 0.35087 2.54060 2.47607 2.01717 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09887 3.94252 2.59375 1.46634 0.26236 1.09861 0.40547 65 1.73665 0.91041 2.05230 1.22727 67 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04194 3.88559 3.88559 1.46634 0.26236 1.76690 0.18737 66 1.52933 2.02471 2.31681 0.59294 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04194 3.88559 3.88559 1.46634 0.26236 0.41813 1.07375 67 2.75032 0.22180 3.32516 2.31214 69 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 68 2.53606 2.51268 3.05033 0.23265 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 69 2.61838 3.48470 0.16306 3.06018 71 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 70 0.16888 3.16013 2.89202 2.85590 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 71 0.38416 2.80907 1.67584 2.63713 73 A - - > 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 72 0.38364 2.81124 1.67601 2.63985 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 73 2.14062 1.47950 1.72664 0.74069 75 u - - > 1.38629 1.38629 1.38629 1.38629 0.03957 3.94252 3.94252 1.46634 0.26236 1.09861 0.40547 74 3.35904 0.21044 3.01459 2.24488 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.01998 3.92293 * 1.46634 0.26236 0.00000 * //