INFERNAL1/a [1.1.5 | Sep 2023] NAME snoR64a ACC RF01163 DESC Small nucleolar RNA snoR64a STATES 235 NODES 79 CLEN 77 W 163 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 01:05:00 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01163/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 3.097656 CKSUM 1470466124 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.00 NC 44.90 EFP7GF -8.4263 0.71861 ECMLC 0.62627 -9.85915 -0.00450 1600000 574795 0.002088 ECMGC 0.40228 -15.23628 -2.17941 1600000 76421 0.005234 ECMLI 0.47508 -9.30018 2.34046 1600000 302652 0.003965 ECMGI 0.44464 -6.92624 4.08827 1600000 53584 0.007465 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 163 248 -7.361 -7.568 -0.040 -5.982 IL 1 1 2 1 4 2 31 165 251 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 31 165 250 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 2 30 164 249 -5.727 -0.056 -5.727 0.940 -1.037 -1.062 0.157 D 4 2 3 5 3 0 26 160 245 -11.551 -1.585 -0.585 IL 5 5 3 5 3 3 32 170 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 2 30 162 247 -5.727 -0.056 -5.727 -0.950 -1.035 0.018 0.987 D 7 5 3 8 3 0 25 159 244 -11.551 -1.585 -0.585 IL 8 8 3 8 3 3 31 168 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 2 29 161 246 -5.727 -0.056 -5.727 0.475 -0.060 -0.841 0.128 D 10 8 3 11 3 0 25 158 243 -11.551 -1.585 -0.585 IL 11 11 3 11 3 2 30 167 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 1 28 160 244 -5.727 -0.056 -5.727 0.489 -0.100 -0.840 0.144 D 13 11 3 14 3 0 24 157 241 -11.551 -1.585 -0.585 IL 14 14 3 14 3 2 30 166 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 27 158 243 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 16 14 3 17 3 0 23 155 240 -11.551 -1.585 -0.585 IL 17 17 3 17 3 2 29 165 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 26 157 242 -5.727 -0.056 -5.727 0.034 -1.009 -1.105 1.010 D 19 17 3 20 3 0 23 154 238 -11.551 -1.585 -0.585 IL 20 20 3 20 3 2 28 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 25 156 240 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 22 20 3 23 3 0 22 153 237 -11.551 -1.585 -0.585 IL 23 23 3 23 3 2 27 162 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 24 155 239 -5.727 -0.296 -2.588 -1.067 -0.175 1.100 -1.017 D 25 23 3 26 3 0 21 151 235 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 27 161 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - c - - - ML 27 26 3 29 3 1 25 154 238 -5.497 -0.065 -5.497 -0.837 0.680 0.234 -0.596 D 28 26 3 29 3 0 21 150 233 -13.400 -3.435 -0.140 IL 29 29 3 29 3 1 26 160 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - c - - - ML 30 29 3 32 3 1 24 152 236 -5.497 -0.065 -5.497 0.214 0.731 -0.978 -0.572 D 31 29 3 32 3 0 21 149 233 -13.400 -3.435 -0.140 IL 32 32 3 32 3 1 26 159 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 23 151 235 -5.497 -0.065 -5.497 0.011 -1.411 1.095 -1.059 D 34 32 3 35 3 0 20 149 233 -13.400 -0.295 -2.435 IL 35 35 3 35 3 1 25 157 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 22 150 233 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 37 35 3 38 3 0 18 146 230 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 24 156 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - g - - - ML 39 38 3 41 3 1 22 148 232 -5.727 -0.056 -5.727 0.474 -1.480 0.843 -1.122 D 40 38 3 41 3 0 17 145 228 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 23 155 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 1 21 147 230 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 43 41 3 44 3 0 16 144 227 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 22 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 20 146 229 -5.727 -0.056 -5.727 -1.300 0.043 -1.482 1.141 D 46 44 3 47 3 0 15 143 226 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 22 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - G - - - ML 48 47 3 50 3 1 19 144 228 -5.727 -0.056 -5.727 -0.193 -1.825 1.312 -1.476 D 49 47 3 50 3 0 15 141 224 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 21 151 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 19 143 226 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 52 50 3 53 3 0 14 140 223 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 20 150 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - U - - - ML 54 53 3 56 3 1 18 142 225 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 55 53 3 56 3 0 13 139 221 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 20 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 17 141 223 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 58 56 3 59 3 0 12 137 220 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 19 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 16 139 222 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 61 59 3 62 3 0 12 136 218 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 18 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 16 138 220 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 64 62 3 65 3 0 11 135 217 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 17 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 66 65 3 68 3 1 15 137 219 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 67 65 3 68 3 0 10 133 215 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 17 143 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 69 68 3 71 3 1 14 135 217 -5.727 -0.056 -5.727 -0.120 -1.783 1.274 -1.432 D 70 68 3 71 3 0 10 132 214 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 16 142 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 72 71 3 74 3 1 14 134 216 -5.727 -0.056 -5.727 -2.240 1.709 -2.456 -1.570 D 73 71 3 74 3 0 9 131 212 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 15 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 75 74 3 77 3 1 13 133 214 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 76 74 3 77 3 0 8 129 211 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 15 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 78 77 3 80 3 1 12 131 213 -5.727 -0.056 -5.727 -2.240 1.709 -2.456 -1.570 D 79 77 3 80 3 0 8 128 209 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 14 138 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 81 80 3 83 3 1 12 130 211 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 82 80 3 83 3 0 7 127 208 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 13 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 84 83 3 86 3 1 11 129 210 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 85 83 3 86 3 0 6 125 206 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 13 135 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - a - - - ML 87 86 3 89 3 1 11 127 208 -2.588 -0.296 -5.727 0.983 -1.054 -1.079 0.096 D 88 86 3 89 3 0 6 123 204 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 12 129 211 -0.583 -1.590 -14.532 0.000 0.000 0.000 0.000 [ MATL 30 ] 33 - U - - - ML 90 89 3 92 3 1 10 125 206 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 91 89 3 92 3 0 5 122 203 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 11 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - U - - - ML 93 92 3 95 3 1 9 124 205 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 94 92 3 95 3 0 4 121 201 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 11 131 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 35 - u - - - ML 96 95 3 98 3 1 9 123 203 -5.727 -0.056 -5.727 -0.000 -0.071 -0.870 0.586 D 97 95 3 98 3 0 4 119 200 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 10 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - U - - - ML 99 98 3 101 3 1 8 121 202 -2.511 -0.312 -5.727 -1.288 0.111 -1.470 1.104 D 100 98 3 101 3 0 3 118 198 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 9 122 203 -0.988 -1.012 -14.040 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - U - - - ML 102 101 3 104 3 1 7 120 200 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 103 101 3 104 3 0 3 116 196 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 9 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 40 - u - - - ML 105 104 3 107 3 1 7 119 199 -2.627 -0.288 -5.727 -1.278 0.668 -1.460 0.709 D 106 104 3 107 3 0 2 114 193 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 9 122 203 -0.415 -2.001 -14.899 0.000 0.000 0.000 0.000 [ MATL 36 ] 45 - U - - - ML 108 107 3 110 3 1 6 115 195 -5.727 -0.056 -5.727 -0.962 -1.040 -0.030 1.015 D 109 107 3 110 3 0 2 112 192 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 8 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 46 - G - - - ML 111 110 3 113 3 1 6 114 194 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 112 110 3 113 3 0 1 111 190 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 7 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 47 - g - - - ML 114 113 3 116 3 1 5 113 192 -5.727 -0.056 -5.727 0.509 -1.467 0.808 -1.109 D 115 113 3 116 3 0 1 109 189 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 7 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 48 - G - - - ML 117 116 3 119 3 1 5 111 191 -5.727 -0.056 -5.727 -1.032 -1.346 1.130 -0.106 D 118 116 3 119 3 0 0 108 187 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 6 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 49 - U - - - ML 120 119 3 122 3 1 4 110 189 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 121 119 3 122 3 0 0 107 186 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 5 117 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 50 - a - - - ML 123 122 3 125 3 1 4 109 188 -5.727 -0.056 -5.727 0.490 -0.060 -0.842 0.110 D 124 122 3 125 3 0 0 105 184 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 5 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - u - - - ML 126 125 3 128 3 1 3 107 186 -5.727 -0.056 -5.727 -0.950 -1.035 0.018 0.987 D 127 125 3 128 3 0 0 104 182 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 5 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - U - - - ML 129 128 3 131 3 1 3 106 184 -5.727 -0.056 -5.727 -1.288 0.111 -1.470 1.104 D 130 128 3 131 3 0 0 102 181 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 4 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - A - - - ML 132 131 3 134 3 1 2 104 183 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 133 131 3 134 3 0 0 101 179 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 4 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 54 - U - - - ML 135 134 3 137 3 1 2 103 181 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 136 134 3 137 3 0 0 100 178 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 3 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 55 - G - - - ML 138 137 3 140 3 1 2 101 180 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 139 137 3 140 3 0 0 98 176 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 3 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 56 - A - - - ML 141 140 3 143 3 1 1 100 178 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 142 140 3 143 3 0 0 97 174 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 3 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 57 - U - - - ML 144 143 3 146 3 1 1 99 176 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 145 143 3 146 3 0 0 95 173 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 58 - U - - - ML 147 146 3 149 3 1 1 97 175 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 148 146 3 149 3 0 0 94 171 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 2 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 59 - C - - - ML 150 149 3 152 3 1 1 96 173 -5.727 -0.056 -5.727 -1.459 1.146 -1.653 0.144 D 151 149 3 152 3 0 0 92 169 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 2 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 60 - u - - - ML 153 152 3 155 3 1 1 94 171 -5.727 -0.278 -2.675 0.513 -0.968 -1.005 0.645 D 154 152 3 155 3 0 0 90 167 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 61 - u - - - ML 156 155 3 158 3 1 1 93 170 -5.513 -0.065 -5.513 -0.748 -0.860 0.172 0.788 D 157 155 3 158 3 0 0 88 164 -13.330 -3.364 -0.148 IL 158 158 3 158 3 1 1 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 62 - u - - - ML 159 158 3 161 3 1 1 92 168 -5.513 -0.065 -5.513 0.160 -0.820 -0.871 0.823 D 160 158 3 161 3 0 0 87 164 -13.330 -3.364 -0.148 IL 161 161 3 161 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 63 - u - - - ML 162 161 3 164 3 1 1 90 166 -5.513 -0.065 -5.513 -1.029 0.221 -1.197 0.932 D 163 161 3 164 3 0 0 87 163 -13.330 -3.364 -0.148 IL 164 164 3 164 3 1 1 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 64 - u - - - ML 165 164 3 167 3 1 1 88 165 -2.414 -0.339 -5.513 -1.025 0.288 -1.192 0.887 D 166 164 3 167 3 0 0 87 163 -13.330 -0.312 -2.364 IL 167 167 3 167 3 1 2 88 164 -5.292 -0.037 -12.936 0.000 0.000 0.000 0.000 [ MATL 56 ] 66 - u - - - ML 168 167 3 170 3 1 1 87 163 -5.727 -0.056 -5.727 -1.273 0.636 -1.456 0.738 D 169 167 3 170 3 0 0 84 160 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 67 - U - - - ML 171 170 3 173 3 1 1 86 162 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 172 170 3 173 3 0 0 82 158 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 68 - U - - - ML 174 173 3 176 3 1 1 84 160 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 175 173 3 176 3 0 0 81 156 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 69 - G - - - ML 177 176 3 179 3 1 1 83 158 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 178 176 3 179 3 0 0 79 154 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 70 - u - - - ML 180 179 3 182 3 1 1 81 156 -5.727 -0.056 -5.727 0.571 -0.970 -1.003 0.590 D 181 179 3 182 3 0 0 77 152 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 71 - A - - - ML 183 182 3 185 3 1 1 80 154 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 184 182 3 185 3 0 0 76 150 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - U - - - ML 186 185 3 188 3 1 1 78 153 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 187 185 3 188 3 0 0 74 148 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - A - - - ML 189 188 3 191 3 1 1 76 151 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 190 188 3 191 3 0 0 73 147 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 74 - G - - - ML 192 191 3 194 3 1 1 75 149 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 193 191 3 194 3 0 0 71 145 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 75 - G - - - ML 195 194 3 197 3 1 1 73 147 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 196 194 3 197 3 0 0 69 142 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 76 - A - - - ML 198 197 3 200 3 1 1 71 145 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 199 197 3 200 3 0 0 67 140 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 77 - A - - - ML 201 200 3 203 3 1 1 70 143 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 202 200 3 203 3 0 0 66 138 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 78 - G - - - ML 204 203 3 206 3 1 1 68 141 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 205 203 3 206 3 0 0 64 136 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 79 - A - - - ML 207 206 3 209 3 1 1 66 138 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 208 206 3 209 3 0 0 62 134 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 80 - U - - - ML 210 209 3 212 3 1 1 64 136 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 211 209 3 212 3 0 0 60 131 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 81 - C - - - ML 213 212 3 215 3 1 1 62 134 -5.727 -0.056 -5.727 -2.240 1.709 -2.456 -1.570 D 214 212 3 215 3 0 0 57 129 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 82 - U - - - ML 216 215 3 218 3 1 1 60 131 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 217 215 3 218 3 0 0 55 126 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 83 - G - - - ML 219 218 3 221 3 1 1 58 128 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 220 218 3 221 3 0 0 52 122 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 84 - A - - - ML 222 221 3 224 3 1 1 55 125 -5.727 -0.056 -5.727 1.780 -2.581 -2.314 -2.348 D 223 221 3 224 3 0 0 49 119 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 85 - U - - - ML 225 224 3 227 3 1 1 52 122 -5.727 -0.056 -5.727 -1.973 -1.593 -2.146 1.673 D 226 224 3 227 3 0 0 44 114 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 86 - G - - - ML 228 227 3 230 3 1 1 48 117 -5.727 -0.056 -5.727 -1.973 -2.821 1.779 -2.541 D 229 227 3 230 3 0 0 32 101 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 87 - C - - - ML 231 230 3 233 2 1 1 1 1 * 0.000 -0.093 1.094 -1.380 -0.882 D 232 230 3 233 2 0 0 0 0 * 0.000 IL 233 233 3 233 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 78 ] - - - - - - E 234 233 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoR64a ACC RF01163 DESC Small nucleolar RNA snoR64a LENG 77 MAXL 163 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Jul 11 01:05:00 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01163/CM NSEQ 4 EFFN 3.097656 CKSUM 1470466124 STATS LOCAL MSV -9.2933 0.71861 STATS LOCAL VITERBI -9.3551 0.71861 STATS LOCAL FORWARD -3.5737 0.71861 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36687 1.80301 1.45760 1.05699 1.38629 1.38629 1.38629 1.38629 0.02262 5.10246 4.11728 0.39730 1.11515 0.00000 * 1 0.73445 2.10532 2.12247 1.27766 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 2 2.04457 2.10358 1.37405 0.70226 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 3 1.05721 1.42811 1.96912 1.29742 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 4 1.04747 1.45553 1.96821 1.28666 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 5 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 6 1.36279 2.08566 2.15188 0.68605 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 7 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 8 2.12593 1.50774 0.62406 2.09150 - G - - : 1.38629 1.38629 1.38629 1.38629 0.20483 3.96985 1.79373 1.46634 0.26236 1.09861 0.40547 9 1.96638 0.91475 1.22415 1.79930 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04529 3.81031 3.81031 1.46634 0.26236 2.38066 0.09705 10 1.23824 0.87934 2.06443 1.78284 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04529 3.81031 3.81031 1.46634 0.26236 2.38066 0.09705 11 1.37863 2.36430 0.62725 2.12025 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04529 3.81031 3.81031 1.46634 0.26236 0.20454 1.68752 12 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 13 1.05786 2.41214 0.80222 2.16418 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 14 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 15 2.28745 1.35648 2.41362 0.59526 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 16 1.51986 2.65112 0.47673 2.40936 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 17 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 18 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 19 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 20 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 21 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 22 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 23 1.46925 2.62205 0.50316 2.37915 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 24 2.93869 0.20175 3.08861 2.47459 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 25 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 26 2.93869 0.20175 3.08861 2.47459 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 27 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 28 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 29 0.70485 2.11693 2.13445 1.32010 - a - - : 1.38629 1.38629 1.38629 1.38629 0.20483 1.79373 3.96985 1.10199 0.40378 1.09861 0.40547 30 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 31 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 32 1.38615 1.43560 1.98905 0.98039 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 33 2.27936 1.30942 2.40523 0.62096 - U - - : 1.38629 1.38629 1.38629 1.38629 0.21607 1.74042 3.96985 0.70149 0.68487 1.09861 0.40547 34 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 35 2.27213 0.92295 2.39855 0.89474 - u - - : 1.38629 1.38629 1.38629 1.38629 0.19931 1.82120 3.96985 1.38695 0.28746 1.09861 0.40547 36 2.05309 2.10708 1.40719 0.68272 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 37 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 38 1.03338 2.40287 0.82595 2.15486 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 39 2.10155 2.31927 0.60314 1.45973 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 40 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 41 1.04698 1.42783 1.97021 1.31026 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 42 2.04457 2.10358 1.37405 0.70226 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 43 2.27936 1.30942 2.40523 0.62096 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 44 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 45 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 46 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 47 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 48 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 49 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 50 2.39726 0.59178 2.53195 1.28667 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 51 1.03104 2.05726 2.08324 0.93896 - u - - : 1.38629 1.38629 1.38629 1.38629 0.19296 3.96985 1.85400 1.46634 0.26236 1.09861 0.40547 52 1.90489 1.98236 1.26725 0.83976 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04477 3.82166 3.82166 1.46634 0.26236 2.33182 0.10216 53 1.27519 1.95481 1.99028 0.81560 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04477 3.82166 3.82166 1.46634 0.26236 2.33182 0.10216 54 2.09946 1.23306 2.21565 0.74025 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04477 3.82166 3.82166 1.46634 0.26236 2.33182 0.10216 55 2.09644 1.18672 2.21271 0.77115 - u - - : 1.38629 1.38629 1.38629 1.38629 0.23518 1.67301 3.82166 0.02586 3.66782 0.21597 1.63867 56 2.26901 0.94535 2.39521 0.87494 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 57 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 58 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 59 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 60 0.99070 2.05844 2.08176 0.97731 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 61 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 62 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 63 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 64 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 65 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 66 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 67 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 68 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 69 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 70 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 71 2.93869 0.20175 3.08861 2.47459 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 72 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 73 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 74 0.15216 3.17527 2.99056 3.01368 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 75 2.75418 2.49062 2.87392 0.22690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 76 2.75359 3.34152 0.15318 3.14790 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547 77 1.45041 0.62768 2.34305 1.99756 - C - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //