INFERNAL1/a [1.1.5 | Sep 2023] NAME snoU18 ACC RF01159 DESC Small nucleolar RNA U18 STATES 217 NODES 73 CLEN 71 W 149 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 15:17:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01159/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 4.199219 CKSUM 1938060457 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.00 NC 46.90 EFP7GF -10.1075 0.71870 ECMLC 0.55390 -10.28205 0.57025 1600000 489493 0.002452 ECMGC 0.37748 -15.44613 -1.13982 1600000 88587 0.004515 ECMLI 0.44699 -9.97111 2.21608 1600000 278619 0.004307 ECMGI 0.41456 -8.07240 3.94554 1600000 58313 0.006860 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 149 230 -7.666 -7.873 -0.032 -6.287 IL 1 1 2 1 4 1 27 151 232 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 27 150 232 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 27 149 231 -6.000 -0.046 -6.000 0.277 -0.143 -1.010 0.471 D 4 2 3 5 3 0 22 146 227 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 28 155 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - c - - - ML 6 5 3 8 3 1 26 147 229 -6.000 -0.046 -6.000 -0.340 0.506 -0.732 0.248 D 7 5 3 8 3 0 21 144 226 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 28 154 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 1 25 146 228 -6.000 -0.046 -6.000 0.122 -0.981 -0.464 0.749 D 10 8 3 11 3 0 20 143 224 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 27 153 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 1 24 145 226 -6.000 -0.046 -6.000 0.334 -0.222 -0.104 -0.072 D 13 11 3 14 3 0 19 142 223 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 26 152 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 24 144 225 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 16 14 3 17 3 0 19 141 222 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 25 150 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 23 142 224 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 19 17 3 20 3 0 18 139 220 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 25 149 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 22 141 222 -6.000 -0.046 -6.000 1.870 -3.297 -2.983 -3.089 D 22 20 3 23 3 0 17 138 219 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 24 148 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 21 140 221 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 25 23 3 26 3 0 16 137 217 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 23 147 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 21 138 219 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 28 26 3 29 3 0 16 135 216 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 22 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 20 137 218 -6.000 -0.046 -6.000 1.870 -3.297 -2.983 -3.089 D 31 29 3 32 3 0 15 134 214 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 22 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 19 136 216 -6.000 -0.046 -6.000 1.870 -3.297 -2.983 -3.089 D 34 32 3 35 3 0 14 133 213 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 21 143 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 18 135 215 -6.000 -0.046 -6.000 1.635 -2.348 -1.134 -2.046 D 37 35 3 38 3 0 13 131 212 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 20 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 18 133 214 -6.000 -0.046 -6.000 -0.603 -1.436 -1.694 1.413 D 40 38 3 41 3 0 13 130 210 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 19 140 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 1 17 132 212 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 43 41 3 44 3 0 12 129 209 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 19 139 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 16 131 211 -6.000 -0.046 -6.000 1.389 -0.594 -1.697 -1.286 D 46 44 3 47 3 0 11 128 207 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 18 138 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 16 129 209 -6.000 -0.046 -6.000 1.383 -1.542 -1.641 -0.457 D 49 47 3 50 3 0 11 126 206 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 17 136 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 15 128 208 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 52 50 3 53 3 0 10 125 204 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 16 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - U - - - ML 54 53 3 56 3 1 14 127 206 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 55 53 3 56 3 0 9 124 203 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 16 134 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 14 125 205 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 58 56 3 59 3 0 9 122 201 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 15 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 60 59 3 62 3 1 13 124 203 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 61 59 3 62 3 0 8 121 200 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 14 131 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 12 123 202 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 64 62 3 65 3 0 7 120 198 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 14 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 11 121 200 -6.000 -0.046 -6.000 -2.796 1.804 -3.038 -2.048 D 67 65 3 68 3 0 6 118 197 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 13 129 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 69 68 3 71 3 1 11 120 199 -6.000 -0.046 -6.000 -2.796 1.804 -3.038 -2.048 D 70 68 3 71 3 0 6 117 195 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 12 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 72 71 3 74 3 1 10 119 197 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 73 71 3 74 3 0 5 116 194 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 12 126 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 75 74 3 77 3 1 10 117 196 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 76 74 3 77 3 0 5 114 192 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 11 125 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 9 116 194 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 79 77 3 80 3 0 4 113 191 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 10 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 81 80 3 83 3 1 8 115 193 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 82 80 3 83 3 0 3 111 189 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 10 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 8 113 191 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 85 83 3 86 3 0 3 110 188 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 9 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 87 86 3 89 3 1 7 112 190 -6.000 -0.046 -6.000 -1.221 -1.291 0.004 1.111 D 88 86 3 89 3 0 2 109 186 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 9 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 90 89 3 92 3 1 7 111 188 -6.000 -0.046 -6.000 1.389 -0.594 -1.697 -1.286 D 91 89 3 92 3 0 2 107 185 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 8 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - U - - - ML 93 92 3 95 3 1 6 109 187 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 94 92 3 95 3 0 1 106 183 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 7 117 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - G - - - ML 96 95 3 98 3 1 5 108 185 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 97 95 3 98 3 0 1 105 182 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 7 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - A - - - ML 99 98 3 101 3 1 5 106 184 -6.000 -0.046 -6.000 1.391 -1.552 -1.652 -0.477 D 100 98 3 101 3 0 0 103 180 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 6 114 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 102 101 3 104 3 1 4 105 182 -4.402 -0.094 -6.000 1.391 -1.552 -1.652 -0.477 D 103 101 3 104 3 0 0 102 179 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 4 105 182 -3.516 -0.133 -11.160 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - U - - - ML 105 104 3 107 3 1 3 104 181 -6.000 -0.046 -6.000 -0.603 -1.436 -1.694 1.413 D 106 104 3 107 3 0 0 101 178 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 5 112 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - U - - - ML 108 107 3 110 3 1 3 103 179 -4.366 -0.096 -6.000 -2.543 -2.064 -2.732 1.782 D 109 107 3 110 3 0 0 100 177 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 3 103 179 -3.563 -0.128 -11.207 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - U - - - ML 111 110 3 113 3 1 2 102 178 -6.000 -0.115 -4.032 -1.503 -1.455 -0.674 1.409 D 112 110 3 113 3 0 0 99 176 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 4 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - a - - - ML 114 113 3 116 3 1 2 100 177 -4.343 -0.098 -5.933 0.550 -0.466 -0.340 0.032 D 115 113 3 116 3 0 0 98 175 -12.529 -0.596 -1.564 IL 116 116 3 116 3 1 3 100 177 -3.505 -0.134 -11.149 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - u - - - ML 117 116 3 119 3 1 2 99 176 -6.000 -0.046 -6.000 -0.401 0.370 -0.625 0.381 D 118 116 3 119 3 0 0 96 172 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 3 107 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - a - - - ML 120 119 3 122 3 1 1 98 174 -6.000 -0.046 -6.000 0.953 -1.127 -0.177 -0.471 D 121 119 3 122 3 0 0 94 170 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 2 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - U - - - ML 123 122 3 125 3 1 1 96 172 -6.000 -0.046 -6.000 -1.825 -0.499 -2.031 1.467 D 124 122 3 125 3 0 0 93 169 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 2 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - U - - - ML 126 125 3 128 3 1 1 95 171 -6.000 -0.046 -6.000 -1.492 -1.448 -0.652 1.401 D 127 125 3 128 3 0 0 92 167 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 2 103 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - G - - - ML 129 128 3 131 3 1 1 93 169 -6.000 -0.046 -6.000 -0.748 -2.529 1.591 -2.196 D 130 128 3 131 3 0 0 90 165 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 2 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - A - - - ML 132 131 3 134 3 1 1 92 168 -6.000 -0.046 -6.000 1.383 -1.542 -1.641 -0.457 D 133 131 3 134 3 0 0 89 164 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 100 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - U - - - ML 135 134 3 137 3 1 1 91 166 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 136 134 3 137 3 0 0 87 162 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 99 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - U - - - ML 138 137 3 140 3 1 1 89 164 -6.000 -0.046 -6.000 -1.503 -1.455 -0.674 1.409 D 139 137 3 140 3 0 0 85 160 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - A - - - ML 141 140 3 143 3 1 1 88 162 -6.000 -0.168 -3.404 1.256 -1.415 -1.499 -0.181 D 142 140 3 143 3 0 0 83 158 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - a - - - ML 144 143 3 146 3 1 1 86 161 -5.881 -0.050 -5.881 0.567 -0.458 -0.394 0.042 D 145 143 3 146 3 0 0 81 155 -12.974 -3.008 -0.192 IL 146 146 3 146 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - A - - - ML 147 146 3 149 3 1 1 85 159 -4.252 -0.104 -5.881 1.282 -1.353 -1.419 -0.316 D 148 146 3 149 3 0 0 80 154 -12.974 -3.008 -0.192 IL 149 149 3 149 3 1 2 86 160 -0.956 -1.046 -12.120 0.000 0.000 0.000 0.000 [ MATL 50 ] 55 - A - - - ML 150 149 3 152 3 1 1 84 158 -5.881 -0.050 -5.881 1.542 -2.034 -0.885 -1.722 D 151 149 3 152 3 0 0 79 152 -12.974 -3.008 -0.192 IL 152 152 3 152 3 1 1 92 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 56 - a - - - ML 153 152 3 155 3 1 1 82 156 -5.881 -0.050 -5.881 0.800 -0.963 -0.285 -0.112 D 154 152 3 155 3 0 0 78 151 -12.974 -3.008 -0.192 IL 155 155 3 155 3 1 1 90 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 57 - c - - - ML 156 155 3 158 3 1 1 80 154 -5.881 -0.050 -5.881 -1.518 0.900 -1.711 0.565 D 157 155 3 158 3 0 0 77 151 -12.974 -3.008 -0.192 IL 158 158 3 158 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 58 - c - - - ML 159 158 3 161 3 1 1 79 152 -3.082 -0.209 -5.881 -0.359 0.662 -1.112 0.232 D 160 158 3 161 3 0 0 77 150 -12.974 -0.413 -2.008 IL 161 161 3 161 3 1 1 79 152 -4.959 -0.047 -12.603 0.000 0.000 0.000 0.000 [ MATL 54 ] 60 - u - - - ML 162 161 3 164 3 1 1 78 151 -6.000 -0.046 -6.000 -0.434 -0.011 -1.167 0.865 D 163 161 3 164 3 0 0 74 147 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 61 - U - - - ML 165 164 3 167 3 1 1 76 149 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 166 164 3 167 3 0 0 72 145 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 62 - C - - - ML 168 167 3 170 3 1 1 74 147 -6.000 -0.046 -6.000 -0.744 1.489 -2.126 -1.445 D 169 167 3 170 3 0 0 71 143 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 63 - C - - - ML 171 170 3 173 3 1 1 73 145 -6.000 -0.046 -6.000 -2.796 1.804 -3.038 -2.048 D 172 170 3 173 3 0 0 69 142 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 82 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 64 - A - - - ML 174 173 3 176 3 1 1 71 143 -3.373 -0.172 -6.000 1.389 -0.594 -1.697 -1.286 D 175 173 3 176 3 0 0 68 140 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 71 143 -4.765 -0.054 -12.409 0.000 0.000 0.000 0.000 [ MATL 59 ] 66 - A - - - ML 177 176 3 179 3 1 1 70 142 -6.000 -0.046 -6.000 1.870 -3.297 -2.983 -3.089 D 178 176 3 179 3 0 0 66 138 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 67 - U - - - ML 180 179 3 182 3 1 1 68 140 -4.370 -0.095 -6.000 -2.543 -2.064 -2.732 1.782 D 181 179 3 182 3 0 0 64 136 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 71 143 -0.576 -1.603 -12.676 0.000 0.000 0.000 0.000 [ MATL 61 ] 71 - U - - - ML 183 182 3 185 3 1 1 67 139 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 184 182 3 185 3 0 0 63 134 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - a - - - ML 186 185 3 188 3 1 1 65 137 -6.000 -0.046 -6.000 0.739 -0.473 -0.447 -0.190 D 187 185 3 188 3 0 0 61 132 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 75 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - C - - - ML 189 188 3 191 3 1 1 63 134 -6.000 -0.046 -6.000 -2.796 1.804 -3.038 -2.048 D 190 188 3 191 3 0 0 59 129 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 74 - U - - - ML 192 191 3 194 3 1 1 61 132 -6.000 -0.046 -6.000 -2.543 -2.064 -2.732 1.782 D 193 191 3 194 3 0 0 56 127 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 75 - G - - - ML 195 194 3 197 3 1 1 59 129 -6.000 -0.046 -6.000 -2.386 -3.396 1.848 -3.122 D 196 194 3 197 3 0 0 54 124 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 70 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 76 - A - - - ML 198 197 3 200 3 1 1 56 126 -6.000 -0.046 -6.000 1.870 -3.297 -2.983 -3.089 D 199 197 3 200 3 0 0 51 121 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 77 - u - - - ML 201 200 3 203 3 1 1 53 123 -3.586 -0.150 -6.000 -0.558 -0.753 0.438 0.456 D 202 200 3 203 3 0 0 49 119 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 53 123 -4.520 -0.065 -12.164 0.000 0.000 0.000 0.000 [ MATL 68 ] 79 - c - - - ML 204 203 3 206 3 1 1 52 122 -6.000 -0.046 -6.000 -0.068 0.374 -1.069 0.349 D 205 203 3 206 3 0 0 46 115 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 65 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 80 - a - - - ML 207 206 3 209 3 1 1 48 118 -3.641 -0.145 -6.000 0.783 -0.470 -0.364 -0.358 D 208 206 3 209 3 0 0 43 113 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 48 118 -4.457 -0.068 -12.101 0.000 0.000 0.000 0.000 [ MATL 70 ] 82 - a - - - ML 210 209 3 212 3 1 1 47 117 -6.000 -0.312 -2.484 0.816 -1.019 -0.385 -0.028 D 211 209 3 212 3 0 0 32 101 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 83 - u - - - ML 213 212 3 215 2 1 1 1 1 * 0.000 0.320 -0.492 -0.468 0.398 D 214 212 3 215 2 0 0 0 0 * 0.000 IL 215 215 3 215 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 216 215 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoU18 ACC RF01159 DESC Small nucleolar RNA U18 LENG 71 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sat Jul 13 15:18:00 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01159/CM NSEQ 16 EFFN 4.199219 CKSUM 1938060457 STATS LOCAL MSV -8.4900 0.71870 STATS LOCAL VITERBI -9.0840 0.71870 STATS LOCAL FORWARD -3.5892 0.71870 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30081 1.78013 1.60094 1.02900 1.38629 1.38629 1.38629 1.38629 0.01828 5.31346 4.32829 0.39730 1.11515 0.00000 * 1 1.19412 1.48531 2.08646 1.05995 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 2 1.62183 1.03536 1.89352 1.21462 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 3 1.30203 2.06593 1.70821 0.86719 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 4 1.15445 1.54016 1.45866 1.43602 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 5 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 6 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 7 0.09040 3.67155 3.45408 3.52727 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 8 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 9 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 10 0.09040 3.67155 3.45408 3.52727 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 11 0.09040 3.67155 3.45408 3.52727 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 12 0.25306 3.01380 2.17200 2.80478 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 13 1.80427 2.38138 2.56048 0.40690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 14 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 15 0.42356 1.79789 2.56263 2.27752 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 16 0.42797 2.45500 2.52373 1.70294 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 17 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 18 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 19 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 20 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 21 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 22 3.32445 0.13568 3.49220 2.80597 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 23 3.32445 0.13568 3.49220 2.80597 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 24 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 25 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 26 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 27 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 28 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 29 2.23252 2.28125 1.38373 0.61629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 30 0.42356 1.79789 2.56263 2.27752 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 31 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 32 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 33 0.42231 2.46194 2.53129 1.71680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 34 0.42231 2.46194 2.53129 1.71680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.06501 3.05095 4.15876 0.09148 2.43700 1.09861 0.40547 35 1.80427 2.38138 2.56048 0.40690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 36 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06627 3.02631 4.15876 0.08843 2.46948 1.09861 0.40547 37 2.42790 2.39459 1.85361 0.40963 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07985 4.15876 2.79494 1.46634 0.26236 1.09861 0.40547 38 1.00539 1.70950 1.62178 1.36416 - a - - : 1.38629 1.38629 1.38629 1.38629 0.06791 3.01023 4.11220 0.09223 2.42926 0.41301 1.08369 39 1.66410 1.13017 1.81934 1.12231 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 40 0.72582 2.16754 1.50875 1.71244 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 41 2.65129 1.73187 2.79375 0.36919 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 42 2.42030 2.39007 1.83856 0.41486 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 43 1.90507 3.13907 0.28329 2.90831 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 44 0.42797 2.45500 2.52373 1.70294 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 45 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 46 2.42790 2.39459 1.85361 0.40963 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 47 0.51541 2.36680 2.42549 1.51174 - A - - : 1.38629 1.38629 1.38629 1.38629 0.11664 4.15876 2.35951 1.46634 0.26236 1.09861 0.40547 48 0.99322 1.70396 1.65910 1.35733 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03452 4.07664 4.07664 1.46634 0.26236 2.08507 0.13273 49 0.49796 2.32384 2.37020 1.60509 - A - - : 1.38629 1.38629 1.38629 1.38629 0.07199 2.94701 4.07664 0.72512 0.66216 2.08507 0.13273 50 0.31776 2.79642 1.99961 2.57959 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03452 4.07664 4.07664 1.46634 0.26236 2.08507 0.13273 51 0.83193 2.05389 1.58350 1.46403 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03452 4.07664 4.07664 1.46634 0.26236 2.08507 0.13273 52 2.43848 0.76236 2.57245 0.99481 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03452 4.07664 4.07664 1.46634 0.26236 2.08507 0.13273 53 1.63495 0.92712 2.15684 1.22535 - c - - : 1.38629 1.38629 1.38629 1.38629 0.14510 2.13621 4.07664 0.03267 3.43749 0.28581 1.39192 54 1.68701 1.39360 2.19495 0.78661 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 55 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 56 1.90206 0.35432 2.85979 2.38808 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 57 3.32445 0.13568 3.49220 2.80597 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 58 0.42356 1.79789 2.56263 2.27752 - A - - : 1.38629 1.38629 1.38629 1.38629 0.11896 2.33793 4.15876 0.03748 3.30267 1.09861 0.40547 59 0.09040 3.67155 3.45408 3.52727 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 60 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06612 3.02913 4.15876 1.11091 0.39937 1.09861 0.40547 61 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 62 0.87377 1.71448 1.69594 1.51802 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 63 3.32445 0.13568 3.49220 2.80597 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 64 3.14865 2.81667 3.28028 0.15121 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 65 3.04016 3.73990 0.10569 3.55045 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 66 0.09040 3.67155 3.45408 3.52727 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 67 1.77282 1.90790 1.08261 1.06990 - u - - : 1.38629 1.38629 1.38629 1.38629 0.10411 2.48596 4.15876 0.04458 3.13268 1.09861 0.40547 68 1.43347 1.12707 2.12706 1.14460 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03175 4.15876 4.15876 1.46634 0.26236 1.09861 0.40547 69 0.84338 1.71238 1.63879 1.63428 - a - - : 1.38629 1.38629 1.38629 1.38629 0.10071 2.52346 4.15876 0.04662 3.08899 1.09861 0.40547 70 0.82083 2.09259 1.65322 1.40595 - a - - : 1.38629 1.38629 1.38629 1.38629 0.21617 4.15876 1.72164 1.46634 0.26236 1.09861 0.40547 71 1.16479 1.72733 1.71049 1.11025 - u - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //