INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD108 ACC RF01158 DESC Small nucleolar RNA SNORD108 STATES 217 NODES 70 CLEN 71 W 88 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 22:48:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01158/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.417969 CKSUM 3491312055 NULL 0.000 0.000 0.000 0.000 GA 46.00 TC 46.60 NC 45.10 EFP7GF -9.0743 0.71874 ECMLC 0.61299 -6.69263 2.54653 1600000 345778 0.003470 ECMGC 0.38126 -17.80840 -3.19462 1600000 105151 0.003804 ECMLI 0.58434 -5.04836 4.25390 1600000 275349 0.004358 ECMGI 0.41946 -11.89654 0.76490 1600000 81017 0.004937 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 88 109 -9.182 -9.121 -0.020 -7.898 -8.177 -8.572 IL 1 1 2 1 6 1 29 90 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 29 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 72 G C - - MP 3 2 3 7 4 2 29 88 109 -7.135 -7.342 -0.047 -5.757 -4.176 -2.797 -4.200 0.673 -4.959 -4.642 -0.331 -4.580 -4.064 3.343 -4.447 0.973 -0.610 -4.109 -2.322 -3.091 ML 4 2 3 7 4 1 27 89 109 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 4 1 25 88 109 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 6 2 3 7 4 0 24 87 108 -4.568 -4.250 -2.265 -0.520 IL 7 7 5 7 4 1 28 90 111 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 8 8 6 8 3 1 28 89 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 9 8 6 11 3 1 27 86 107 -8.519 -0.017 -6.836 -2.171 1.722 -3.002 -1.499 D 10 8 6 11 3 0 23 85 105 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 26 87 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 71 - U - - MR 12 11 3 14 5 1 26 85 106 -7.247 -0.035 -7.063 -7.275 -8.166 -0.626 -1.009 -0.474 1.094 D 13 11 3 14 5 0 21 84 104 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 25 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 70 U G - - MP 15 14 3 19 6 2 26 84 104 -9.182 -9.121 -0.020 -7.898 -8.177 -8.572 -4.454 -4.389 -4.073 -0.690 -2.725 -4.439 1.569 -3.530 -4.118 -0.558 -4.372 -2.380 0.672 -4.504 3.207 -2.971 ML 16 14 3 19 6 1 22 83 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 20 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 18 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 23 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 23 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 69 U G - - MP 21 20 6 25 4 2 24 82 102 -7.135 -7.342 -0.047 -5.757 -4.454 -4.389 -4.073 -0.690 -2.725 -4.439 1.569 -3.530 -4.118 -0.558 -4.372 -2.380 0.672 -4.504 3.207 -2.971 ML 22 20 6 25 4 1 21 82 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 19 82 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 17 81 101 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 23 84 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 22 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - u - - - ML 27 26 6 29 3 1 22 80 100 -8.139 -0.018 -6.793 0.540 -0.928 -1.149 0.650 D 28 26 6 29 3 0 17 78 99 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 21 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 30 29 3 32 3 1 21 79 99 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 31 29 3 32 3 0 16 77 98 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 21 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - U - - - ML 33 32 3 35 3 1 21 78 98 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 34 32 3 35 3 0 15 76 97 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 20 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 36 35 3 38 3 1 20 77 97 -8.139 -0.018 -6.793 -1.950 -3.224 1.795 -2.612 D 37 35 3 38 3 0 14 75 96 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 19 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 39 38 3 41 3 1 19 76 96 -8.139 -0.018 -6.793 1.189 -1.607 -0.132 -1.064 D 40 38 3 41 3 0 13 74 95 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 42 41 3 44 3 1 18 75 95 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 43 41 3 44 3 0 13 73 94 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - g - - - ML 45 44 3 47 3 1 18 74 94 -8.139 -0.018 -6.793 -0.454 0.316 0.356 -0.425 D 46 44 3 47 3 0 12 72 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 48 47 3 50 3 1 17 73 93 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 49 47 3 50 3 0 11 71 91 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - G - - - ML 51 50 3 53 3 1 16 72 92 -8.139 -0.018 -6.793 -1.950 -3.224 1.795 -2.612 D 52 50 3 53 3 0 10 70 90 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - A - - - ML 54 53 3 56 3 1 15 71 91 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 55 53 3 56 3 0 9 69 89 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - a - - - ML 57 56 3 59 3 1 15 70 90 -8.139 -0.018 -6.793 0.621 0.364 -1.240 -0.412 D 58 56 3 59 3 0 9 68 88 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 60 59 3 62 3 1 14 69 89 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 61 59 3 62 3 0 8 67 87 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 13 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - C - - - ML 63 62 3 65 3 1 13 68 87 -8.139 -0.018 -6.793 -2.171 1.722 -3.002 -1.499 D 64 62 3 65 3 0 7 66 86 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - A - - - ML 66 65 3 68 3 1 12 66 86 -8.139 -0.018 -6.793 1.124 -0.365 -1.275 -0.664 D 67 65 3 68 3 0 6 65 85 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - U - - - ML 69 68 3 71 3 1 12 65 85 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 70 68 3 71 3 0 5 64 84 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - U - - - ML 72 71 3 74 3 1 11 64 84 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 73 71 3 74 3 0 5 63 83 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - a - - - ML 75 74 3 77 3 1 10 63 83 -8.139 -0.018 -6.793 0.704 -1.564 0.610 -0.981 D 76 74 3 77 3 0 4 62 82 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 78 77 3 80 3 1 9 62 82 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 79 77 3 80 3 0 3 61 81 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - U - - - ML 81 80 3 83 3 1 9 61 81 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 82 80 3 83 3 0 3 60 80 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - U - - - ML 84 83 3 86 3 1 8 60 80 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 85 83 3 86 3 0 2 59 79 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - C - - - ML 87 86 3 89 3 1 7 59 79 -8.139 -0.018 -6.793 -2.171 1.722 -3.002 -1.499 D 88 86 3 89 3 0 1 58 78 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - U - - - ML 90 89 3 92 3 1 7 58 78 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 91 89 3 92 3 0 0 57 77 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - U - - - ML 93 92 3 95 3 1 6 57 77 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 94 92 3 95 3 0 0 56 76 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - G - - - ML 96 95 3 98 3 1 6 56 76 -8.139 -0.018 -6.793 0.018 -1.851 1.199 -1.269 D 97 95 3 98 3 0 0 55 74 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - A - - - ML 99 98 3 101 3 1 5 55 75 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 100 98 3 101 3 0 0 54 73 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - a - - - ML 102 101 3 104 3 1 4 54 74 -8.139 -0.018 -6.793 0.629 -0.321 -0.194 -0.362 D 103 101 3 104 3 0 0 53 72 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - U - - - ML 105 104 3 107 3 1 4 53 72 -8.139 -0.018 -6.793 -0.962 -0.148 -1.721 1.190 D 106 104 3 107 3 0 0 51 71 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - u - - - ML 108 107 3 110 3 1 3 52 71 -8.139 -0.018 -6.793 -0.854 0.572 -1.653 0.716 D 109 107 3 110 3 0 0 50 70 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - u - - - ML 111 110 3 113 3 1 3 51 70 -8.139 -0.018 -6.793 -0.461 -1.027 0.340 0.601 D 112 110 3 113 3 0 0 49 69 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - G - - - ML 114 113 3 116 3 1 2 50 69 -8.139 -0.018 -6.793 0.055 -1.830 1.176 -1.248 D 115 113 3 116 3 0 0 48 68 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - A - - - ML 117 116 3 119 3 1 2 49 68 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 118 116 3 119 3 0 0 47 67 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - U - - - ML 120 119 3 122 3 1 2 48 67 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 121 119 3 122 3 0 0 46 66 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - G - - - ML 123 122 3 125 3 1 1 47 66 -8.139 -0.018 -6.793 -1.950 -3.224 1.795 -2.612 D 124 122 3 125 3 0 0 45 65 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - A - - - ML 126 125 3 128 3 1 1 46 65 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 127 125 3 128 3 0 0 44 64 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - C - - - ML 129 128 3 131 3 1 1 44 64 -8.139 -0.018 -6.793 -1.022 1.052 -1.852 0.210 D 130 128 3 131 3 0 0 43 63 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 40 - A - - - ML 132 131 3 134 3 1 1 43 63 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 133 131 3 134 3 0 0 42 62 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 41 - g - - - ML 135 134 3 137 3 1 1 42 62 -8.139 -0.018 -6.793 -0.450 0.207 0.465 -0.449 D 136 134 3 137 3 0 0 41 61 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 42 - U - - - ML 138 137 3 140 3 1 1 41 61 -8.139 -0.018 -6.793 -0.962 -0.148 -1.721 1.190 D 139 137 3 140 3 0 0 40 59 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 43 - U - - - ML 141 140 3 143 3 1 1 40 59 -8.139 -0.018 -6.793 -0.589 -0.997 -0.365 1.041 D 142 140 3 143 3 0 0 39 58 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 44 - U - - - ML 144 143 3 146 3 1 1 39 58 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 145 143 3 146 3 0 0 38 57 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 45 - u - - - ML 147 146 3 149 3 1 1 38 57 -8.139 -0.018 -6.793 -0.850 0.484 -1.643 0.788 D 148 146 3 149 3 0 0 37 56 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 46 - C - - - ML 150 149 3 152 3 1 1 37 56 -8.139 -0.018 -6.793 -2.171 1.722 -3.002 -1.499 D 151 149 3 152 3 0 0 36 55 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 47 - A - - - ML 153 152 3 155 3 1 1 36 55 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 154 152 3 155 3 0 0 35 54 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 48 - U - - - ML 156 155 3 158 3 1 1 35 54 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 157 155 3 158 3 0 0 34 53 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 49 - U - - - ML 159 158 3 161 3 1 1 34 53 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 160 158 3 161 3 0 0 33 52 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 50 - C - - - ML 162 161 3 164 3 1 1 33 52 -8.139 -0.018 -6.793 -2.171 1.722 -3.002 -1.499 D 163 161 3 164 3 0 0 31 51 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 51 - C - - - ML 165 164 3 167 3 1 1 32 51 -8.139 -0.018 -6.793 -1.045 1.084 -1.877 0.167 D 166 164 3 167 3 0 0 30 50 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 52 - U - - - ML 168 167 3 170 3 1 1 30 49 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 169 167 3 170 3 0 0 29 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 53 - G - - - ML 171 170 3 173 3 1 1 29 48 -8.139 -0.018 -6.793 0.108 -1.801 1.141 -1.219 D 172 170 3 173 3 0 0 28 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 54 - C - - - ML 174 173 3 176 3 1 1 28 47 -8.139 -0.018 -6.793 -2.171 1.722 -3.002 -1.499 D 175 173 3 176 3 0 0 27 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 55 - A - - - ML 177 176 3 179 3 1 1 27 46 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 178 176 3 179 3 0 0 26 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 56 - A - - - ML 180 179 3 182 3 1 1 26 45 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 181 179 3 182 3 0 0 25 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 57 - A - - - ML 183 182 3 185 3 1 1 25 44 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 184 182 3 185 3 0 0 24 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 58 - G - - - ML 186 185 3 188 3 1 1 24 43 -8.139 -0.018 -6.793 -1.950 -3.224 1.795 -2.612 D 187 185 3 188 3 0 0 23 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 59 - G - - - ML 189 188 3 191 3 1 1 23 41 -8.139 -0.018 -6.793 0.018 -1.851 1.199 -1.269 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 60 - G - - - ML 192 191 3 194 3 1 1 22 40 -8.139 -0.018 -6.793 -1.950 -3.224 1.795 -2.612 D 193 191 3 194 3 0 0 21 39 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 61 - A - - - ML 195 194 3 197 3 1 1 20 39 -8.139 -0.018 -6.793 1.785 -2.726 -2.323 -2.305 D 196 194 3 197 3 0 0 19 38 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 62 - g - - - ML 198 197 3 200 3 1 1 19 38 -2.775 -0.243 -6.793 0.184 -0.994 0.364 0.104 D 199 197 3 200 3 0 0 17 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 38 -1.900 -0.534 -4.600 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - u - - - ML 201 200 3 203 3 1 1 17 36 -8.139 -0.018 -6.793 -0.850 0.484 -1.643 0.788 D 202 200 3 203 3 0 0 17 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - c - - - ML 204 203 3 206 3 1 1 16 35 -8.139 -0.018 -6.793 -0.712 0.989 -0.540 -0.479 D 205 203 3 206 3 0 0 16 34 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - U - - - ML 207 206 3 209 3 1 1 15 33 -8.139 -0.018 -6.793 -1.815 -1.755 -2.564 1.701 D 208 206 3 209 3 0 0 15 33 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - G - - - ML 210 209 3 212 3 1 1 13 31 -8.139 -0.018 -6.793 -0.576 -0.502 1.020 -0.749 D 211 209 3 212 3 0 0 13 32 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 68 - A - - - ML 213 212 3 215 2 1 1 1 1 * 0.000 1.233 -1.630 -0.220 -1.095 D 214 212 3 215 2 0 0 0 0 * 0.000 IL 215 215 3 215 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 216 215 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD108 ACC RF01158 DESC Small nucleolar RNA SNORD108 LENG 71 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 22:48:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01158/CM NSEQ 4 EFFN 2.511719 CKSUM 3491312055 STATS LOCAL MSV -8.8484 0.71874 STATS LOCAL VITERBI -9.2051 0.71874 STATS LOCAL FORWARD -3.8563 0.71874 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31093 1.62620 1.55150 1.13374 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 0.00000 * 1 2.16775 2.88886 0.26589 2.75825 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 2 2.94435 0.18268 3.52063 2.46806 2 C - - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 3 3.01569 1.61631 2.81537 0.36748 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 4 3.01604 1.61630 2.81553 0.36745 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 5 1.00863 2.04089 2.19469 0.93147 5 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 6 0.14198 3.32010 3.03631 3.03233 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 7 2.68598 2.63707 3.20636 0.19873 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 8 2.78299 3.67195 0.13486 3.24717 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 9 0.55454 2.52187 1.47572 2.14778 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 10 2.68598 2.63707 3.20636 0.19873 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 11 1.71554 1.15948 1.13031 1.69527 11 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 12 0.14198 3.32010 3.03631 3.03233 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 13 2.78299 3.67195 0.13486 3.24717 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 14 0.14198 3.32010 3.03631 3.03233 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 15 0.95161 1.12634 2.26144 1.68490 15 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 16 2.68598 2.63707 3.20636 0.19873 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 17 2.94435 0.18268 3.52063 2.46806 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 18 0.59927 1.63880 2.28747 1.86401 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 19 2.68598 2.63707 3.20636 0.19873 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 20 2.68598 2.63707 3.20636 0.19873 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 21 0.89438 2.49130 0.95583 2.08872 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 22 2.68598 2.63707 3.20636 0.19873 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 23 2.68598 2.63707 3.20636 0.19873 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 24 2.68598 2.63707 3.20636 0.19873 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 25 2.94435 0.18268 3.52063 2.46806 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 26 2.68598 2.63707 3.20636 0.19873 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 27 2.68598 2.63707 3.20636 0.19873 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 28 1.37816 2.69387 0.54589 2.29250 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 29 0.14198 3.32010 3.03631 3.03233 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 30 0.94678 1.60733 1.51917 1.64665 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 31 2.07419 1.48932 2.60209 0.55391 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 32 1.99736 0.98190 2.55309 0.88705 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 33 1.71776 2.11109 1.14405 0.96522 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 34 1.35230 2.67930 0.56174 2.27762 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 35 0.14198 3.32010 3.03631 3.03233 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 36 2.68598 2.63707 3.20636 0.19873 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 37 2.78299 3.67195 0.13486 3.24717 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 38 0.14198 3.32010 3.03631 3.03233 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 39 2.11800 0.64616 2.69628 1.24404 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 40 0.14198 3.32010 3.03631 3.03233 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 41 1.71265 1.23599 1.05361 1.71263 41 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 42 2.07419 1.48932 2.60209 0.55391 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 43 1.80955 2.09194 1.64024 0.65606 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 44 2.68598 2.63707 3.20636 0.19873 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 45 1.99427 1.04365 2.54588 0.83629 45 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 46 2.94435 0.18268 3.52063 2.46806 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 47 0.14198 3.32010 3.03631 3.03233 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 48 2.68598 2.63707 3.20636 0.19873 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 49 2.68598 2.63707 3.20636 0.19873 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 50 2.94435 0.18268 3.52063 2.46806 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 51 2.13411 0.62400 2.71364 1.27454 51 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 52 2.68598 2.63707 3.20636 0.19873 52 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 53 1.31502 2.65883 0.58554 2.25671 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 54 2.94435 0.18268 3.52063 2.46806 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 55 0.14198 3.32010 3.03631 3.03233 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 56 0.14198 3.32010 3.03631 3.03233 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 57 0.14198 3.32010 3.03631 3.03233 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 58 2.78299 3.67195 0.13486 3.24717 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 59 1.37816 2.69387 0.54589 2.29250 59 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 60 2.78299 3.67195 0.13486 3.24717 60 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 61 0.14198 3.32010 3.03631 3.03233 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 62 1.26066 2.08508 1.12751 1.31529 62 g - - _ 1.38629 1.38629 1.38629 1.38629 0.20578 1.78792 3.98012 0.21009 1.66344 1.09861 0.40547 63 1.99427 1.04365 2.54588 0.83629 64 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 64 1.90139 0.68707 1.76398 1.73597 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 65 2.68598 2.63707 3.20636 0.19873 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 66 1.80413 1.73602 0.66632 1.92713 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 67 0.52436 2.53821 1.53812 2.16918 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 68 2.17052 2.99708 0.25802 2.75878 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 69 2.17195 2.99930 0.25746 2.76129 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 70 1.83633 2.10069 1.71690 0.61877 71 U - - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 71 3.00226 0.42838 2.70459 1.46160 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.01922 3.96126 * 1.46634 0.26236 0.00000 * //