INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD123 ACC RF01156 DESC Small nucleolar RNA SNORD123 STATES 214 NODES 66 CLEN 70 W 87 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 21:53:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01156/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 12 EFFN 2.006836 CKSUM 3782925176 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.40 NC 44.40 EFP7GF -8.6986 0.71881 ECMLC 0.70603 -4.98670 3.21325 1600000 392171 0.003060 ECMGC 0.44064 -16.45328 -4.05362 1600000 94401 0.004237 ECMLI 0.62140 -3.93637 4.99791 1600000 309234 0.003881 ECMGI 0.45460 -11.52575 -0.16705 1600000 69921 0.005721 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 87 108 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 IL 1 1 2 1 6 1 24 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 24 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 73 G C - - MP 3 2 3 7 6 2 28 87 108 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -3.860 -2.746 -3.828 0.774 -3.971 -4.312 0.539 -4.087 -3.844 3.233 -4.212 -0.446 0.618 -3.764 -1.470 -2.754 ML 4 2 3 7 6 1 22 86 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 21 86 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 17 83 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 23 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 24 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 72 G C - - MP 9 8 6 13 6 2 27 85 106 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.803 -3.123 -4.908 0.159 -5.319 -4.718 -0.668 -5.155 -4.368 3.653 -4.700 -0.824 -1.052 -4.508 -2.709 -3.784 ML 10 8 6 13 6 1 21 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 21 84 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 16 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 23 85 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 23 85 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 71 U A - - MP 15 14 6 19 6 2 26 83 104 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.262 -4.089 -4.093 -0.379 -3.019 -4.650 1.311 -3.720 -4.097 -0.136 -4.466 -1.986 3.361 -4.411 -0.693 -2.914 ML 16 14 6 19 6 1 21 82 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 20 82 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 16 79 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 22 83 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 22 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 70 G C - - MP 21 20 6 25 6 2 24 81 102 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.803 -3.123 -4.908 0.159 -5.319 -4.718 -0.668 -5.155 -4.368 3.653 -4.700 -0.824 -1.052 -4.508 -2.709 -3.784 ML 22 20 6 25 6 1 20 80 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 19 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 15 78 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 21 81 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 21 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 69 A U - - MP 27 26 6 31 6 2 23 79 100 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -3.847 -2.864 -3.862 3.367 -4.227 -5.295 0.076 -3.900 -3.751 1.018 -4.301 -0.331 -0.341 -4.473 -1.864 -2.692 ML 28 26 6 31 6 1 19 79 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 18 78 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 15 76 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 20 79 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 20 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 68 A U - - MP 33 32 6 37 4 2 21 77 98 -6.979 -7.186 -0.052 -5.600 -3.309 -0.796 -3.384 3.070 -3.786 -4.536 0.269 -3.602 -3.365 1.466 -3.903 -0.184 0.010 -3.721 -1.560 -2.335 ML 34 32 6 37 4 1 18 78 98 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 16 77 98 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 15 76 97 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 20 79 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 19 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - a - - - ML 39 38 6 41 3 1 19 75 96 -7.993 -0.020 -6.648 0.998 -0.527 -0.757 -0.481 D 40 38 6 41 3 0 14 74 94 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 42 41 3 44 3 1 18 74 94 -7.993 -0.020 -6.648 1.137 -1.162 -0.788 -0.369 D 43 41 3 44 3 0 13 73 93 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 45 44 3 47 3 1 18 73 93 -7.993 -0.020 -6.648 -0.786 -1.011 -1.126 1.302 D 46 44 3 47 3 0 13 72 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 48 47 3 50 3 1 17 72 92 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 49 47 3 50 3 0 12 71 91 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 51 50 3 53 3 1 16 71 91 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 52 50 3 53 3 0 11 70 90 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 15 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 54 53 3 56 3 1 15 70 90 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 55 53 3 56 3 0 11 69 89 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 57 56 3 59 3 1 14 69 89 -7.993 -0.085 -4.224 -1.643 -2.873 1.737 -2.260 D 58 56 3 59 3 0 10 68 88 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 60 59 3 62 3 1 14 68 88 -7.929 -0.021 -6.583 1.703 -2.301 -1.940 -1.837 D 61 59 3 62 3 0 9 67 87 -6.671 -0.968 -1.062 IL 62 62 3 62 3 1 13 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 63 62 3 65 3 1 14 67 87 -7.993 -0.020 -6.648 1.192 -0.602 -1.218 -0.673 D 64 62 3 65 3 0 8 65 86 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 13 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - u - - - ML 66 65 3 68 3 1 13 66 86 -7.993 -0.020 -6.648 -0.522 -0.218 -0.981 0.954 D 67 65 3 68 3 0 7 64 85 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 69 68 3 71 3 1 12 65 85 -7.993 -0.020 -6.648 -0.373 -0.201 -1.291 0.963 D 70 68 3 71 3 0 7 63 84 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - c - - - ML 72 71 3 74 3 1 12 64 84 -7.993 -0.020 -6.648 -0.160 0.557 -0.913 0.141 D 73 71 3 74 3 0 6 62 83 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 75 74 3 77 3 1 11 63 83 -7.993 -0.020 -6.648 -0.459 -1.001 -1.491 1.273 D 76 74 3 77 3 0 5 61 81 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 78 77 3 80 3 1 10 62 82 -7.993 -0.020 -6.648 -0.495 -2.038 1.422 -1.447 D 79 77 3 80 3 0 5 60 80 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 81 80 3 83 3 1 10 61 81 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 82 80 3 83 3 0 4 59 79 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - G - - - ML 84 83 3 86 3 1 9 60 80 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 85 83 3 86 3 0 4 58 78 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 87 86 3 89 3 1 8 59 79 -7.993 -0.020 -6.648 -1.021 -1.980 1.478 -1.095 D 88 86 3 89 3 0 3 57 77 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - c - - - ML 90 89 3 92 3 1 8 58 78 -7.993 -0.020 -6.648 0.010 0.332 -0.444 -0.001 D 91 89 3 92 3 0 2 56 76 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 59 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - g - - - ML 93 92 3 95 3 1 7 57 76 -7.993 -0.020 -6.648 -0.038 -1.147 0.777 -0.217 D 94 92 3 95 3 0 2 55 75 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 58 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 96 95 3 98 3 1 6 56 75 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 97 95 3 98 3 0 1 54 74 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 57 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 99 98 3 101 3 1 5 54 74 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 100 98 3 101 3 0 1 53 73 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 102 101 3 104 3 1 5 53 73 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 103 101 3 104 3 0 0 52 72 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - A - - - ML 105 104 3 107 3 1 4 52 72 -3.238 -0.243 -4.356 1.731 -2.431 -2.057 -1.979 D 106 104 3 107 3 0 0 50 70 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 4 53 73 -1.754 -0.604 -4.454 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - u - - - ML 108 107 3 110 3 1 4 51 71 -4.392 -0.086 -6.590 -0.155 -0.529 -0.826 0.884 D 109 107 3 110 3 0 0 49 69 -6.625 -1.013 -1.016 IL 110 110 3 110 3 1 3 52 72 -1.578 -0.705 -4.278 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - U - - - ML 111 110 3 113 3 1 4 50 69 -7.993 -0.020 -6.648 -0.915 -0.413 -1.657 1.264 D 112 110 3 113 3 0 0 48 68 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - c - - - ML 114 113 3 116 3 1 3 49 68 -7.993 -0.020 -6.648 -0.062 0.746 -1.289 -0.065 D 115 113 3 116 3 0 0 47 67 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - A - - - ML 117 116 3 119 3 1 3 47 67 -7.993 -0.020 -6.648 1.439 -1.202 -1.431 -1.047 D 118 116 3 119 3 0 0 46 66 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - U - - - ML 120 119 3 122 3 1 3 46 66 -7.993 -0.020 -6.648 -0.937 -0.470 -1.678 1.289 D 121 119 3 122 3 0 0 45 65 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - G - - - ML 123 122 3 125 3 1 2 45 65 -7.993 -0.020 -6.648 -0.694 -1.148 1.282 -1.002 D 124 122 3 125 3 0 0 44 64 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - U - - - ML 126 125 3 128 3 1 2 44 64 -7.993 -0.020 -6.648 -1.068 -0.764 -1.804 1.405 D 127 125 3 128 3 0 0 43 63 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - G - - - ML 129 128 3 131 3 1 2 43 63 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 130 128 3 131 3 0 0 42 61 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - A - - - ML 132 131 3 134 3 1 1 42 62 -7.993 -0.116 -3.769 1.731 -2.431 -2.057 -1.979 D 133 131 3 134 3 0 0 41 60 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - C - - - ML 135 134 3 137 3 1 1 41 61 -7.899 -0.022 -6.553 -1.104 1.306 -1.919 -0.327 D 136 134 3 137 3 0 0 40 59 -6.850 -2.363 -0.327 IL 137 137 3 137 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - U - - - ML 138 137 3 140 3 1 1 40 59 -7.899 -0.022 -6.553 -0.794 -0.323 -1.533 1.188 D 139 137 3 140 3 0 0 39 58 -6.850 -0.815 -1.242 IL 140 140 3 140 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - U - - - ML 141 140 3 143 3 1 1 39 58 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 142 140 3 143 3 0 0 38 57 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - G - - - ML 144 143 3 146 3 1 1 38 57 -7.993 -0.086 -4.209 -1.643 -2.873 1.737 -2.260 D 145 143 3 146 3 0 0 37 56 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - A - - - ML 147 146 3 149 3 1 1 37 56 -7.928 -0.021 -6.582 1.703 -2.299 -1.938 -1.835 D 148 146 3 149 3 0 0 36 55 -6.676 -0.962 -1.068 IL 149 149 3 149 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - A - - - ML 150 149 3 152 3 1 1 36 55 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 151 149 3 152 3 0 0 35 54 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - A - - - ML 153 152 3 155 3 1 1 35 54 -7.993 -0.218 -2.874 1.731 -2.431 -2.057 -1.979 D 154 152 3 155 3 0 0 34 53 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - A - - - ML 156 155 3 158 3 1 1 34 53 -7.799 -0.023 -6.453 1.637 -2.040 -1.705 -1.552 D 157 155 3 158 3 0 0 33 52 -7.307 -0.545 -1.699 IL 158 158 3 158 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - A - - - ML 159 158 3 161 3 1 1 33 52 -4.449 -0.083 -6.648 1.731 -2.431 -2.057 -1.979 D 160 158 3 161 3 0 0 31 50 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 34 53 -1.578 -0.705 -4.278 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - u - - - ML 162 161 3 164 3 1 1 31 50 -7.993 -0.020 -6.648 -0.263 -0.098 0.024 0.282 D 163 161 3 164 3 0 0 30 49 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - G - - - ML 165 164 3 167 3 1 1 30 49 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 166 164 3 167 3 0 0 29 48 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - C - - - ML 168 167 3 170 3 1 1 29 48 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 169 167 3 170 3 0 0 28 47 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - C - - - ML 171 170 3 173 3 1 1 28 47 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 172 170 3 173 3 0 0 27 46 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - A - - - ML 174 173 3 176 3 1 1 27 46 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 175 173 3 176 3 0 0 26 45 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 177 176 3 179 3 1 1 26 45 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 178 176 3 179 3 0 0 25 44 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - C - - - ML 180 179 3 182 3 1 1 25 43 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 181 179 3 182 3 0 0 24 43 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - C - - - ML 183 182 3 185 3 1 1 23 42 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 184 182 3 185 3 0 0 22 41 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - A - - - ML 186 185 3 188 3 1 1 22 41 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 187 185 3 188 3 0 0 21 40 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - U - - - ML 189 188 3 191 3 1 1 21 40 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 190 188 3 191 3 0 0 20 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - U - - - ML 192 191 3 194 3 1 1 20 39 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - U - - - ML 195 194 3 197 3 1 1 19 37 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - C - - - ML 198 197 3 200 3 1 1 17 36 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 199 197 3 200 3 0 0 17 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - C - - - ML 201 200 3 203 3 1 1 16 35 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - U - - - ML 204 203 3 206 3 1 1 15 33 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - G - - - ML 207 206 3 209 3 1 1 13 31 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - A - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 1.731 -2.431 -2.057 -1.979 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD123 ACC RF01156 DESC Small nucleolar RNA SNORD123 LENG 70 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 12 21:53:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01156/CM NSEQ 12 EFFN 2.247070 CKSUM 3782925176 STATS LOCAL MSV -8.6726 0.71881 STATS LOCAL VITERBI -9.2536 0.71881 STATS LOCAL FORWARD -3.6325 0.71881 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.27571 1.55120 1.41437 1.32541 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 0.00000 * 1 2.10775 2.35305 0.42296 2.05333 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 2 2.56735 3.20630 0.17437 3.15185 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 3 2.92960 1.86564 2.66770 0.32521 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 4 2.56012 3.19789 0.17605 3.14005 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 5 0.36104 2.71803 1.79229 2.65264 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 6 0.50112 2.53282 1.50578 2.37656 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 7 0.67387 1.75585 1.93227 1.75625 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 8 0.57830 2.22694 1.95371 1.66314 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 9 1.99394 2.14121 2.20704 0.45208 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 10 2.65288 3.52414 0.15664 3.09966 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 11 0.16287 3.19336 2.92195 2.89250 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 12 2.56699 2.53830 3.08261 0.22515 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 13 2.65288 3.52414 0.15664 3.09966 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09095 3.93820 2.69630 1.46634 0.26236 1.09861 0.40547 14 0.18078 3.09794 2.83602 2.78745 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04179 3.88904 3.88904 1.46634 0.26236 0.45595 1.00470 15 0.53520 1.81154 2.28174 1.90422 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 16 1.78491 1.53830 2.08876 0.70603 16 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 17 1.67089 1.52593 2.32219 0.70029 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 18 1.51478 0.97498 2.03941 1.29888 18 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 19 1.74035 2.13119 2.48186 0.47440 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 20 1.77243 2.88516 0.37029 2.48054 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 21 2.65288 3.52414 0.15664 3.09966 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 22 2.65288 3.52414 0.15664 3.09966 22 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 23 2.17610 2.84832 0.33013 2.20957 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 24 1.39010 1.13651 1.69430 1.40127 24 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 25 1.42975 2.21762 0.81974 1.55488 25 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 26 2.79060 0.21296 3.36605 2.34440 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 27 2.56699 2.53830 3.08261 0.22515 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 28 2.65288 3.52414 0.15664 3.09966 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 29 0.16287 3.19336 2.92195 2.89250 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.21593 2.02562 2.77588 0.27303 1.43157 1.09861 0.40547 30 1.50803 1.76768 1.97363 0.75721 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09309 2.68040 3.89445 0.51525 0.90968 0.48583 0.95500 31 2.08383 1.68695 2.60157 0.48401 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 32 1.44354 0.83936 2.32599 1.45142 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 33 0.36339 2.25404 2.44291 2.18211 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 34 2.10102 1.72955 2.61762 0.46629 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 35 1.93370 2.21655 0.46061 2.15843 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 36 2.20070 1.95045 2.71307 0.38459 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 37 2.65288 3.52414 0.15664 3.09966 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 38 0.16287 3.19336 2.92195 2.89250 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.11518 3.93820 2.41565 1.46634 0.26236 1.09861 0.40547 39 2.23807 0.44244 2.80951 1.65739 41 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86582 3.86582 1.46634 0.26236 1.88463 0.16474 40 1.99242 1.62007 2.50800 0.53731 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86582 3.86582 1.46634 0.26236 0.36208 1.19148 41 2.56699 2.53830 3.08261 0.22515 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 42 2.65288 3.52414 0.15664 3.09966 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09164 3.93820 2.68700 1.46634 0.26236 1.09861 0.40547 43 0.18103 3.09665 2.83486 2.78604 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04182 3.88838 3.88838 1.46634 0.26236 0.45255 1.01061 44 0.16287 3.19336 2.92195 2.89250 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 45 0.16287 3.19336 2.92195 2.89250 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.19631 3.93820 1.84034 1.46634 0.26236 1.09861 0.40547 46 0.22406 2.90439 2.66192 2.57524 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04633 3.78821 3.78821 1.46634 0.26236 0.21949 1.62420 47 0.16287 3.19336 2.92195 2.89250 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08892 2.72416 3.93820 0.51525 0.90968 1.09861 0.40547 48 1.59187 1.44615 1.35470 1.19417 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 49 2.65288 3.52414 0.15664 3.09966 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 50 2.79060 0.21296 3.36605 2.34440 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 51 2.79060 0.21296 3.36605 2.34440 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 52 0.16287 3.19336 2.92195 2.89250 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 53 2.56699 2.53830 3.08261 0.22515 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 54 2.79060 0.21296 3.36605 2.34440 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 55 2.79060 0.21296 3.36605 2.34440 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 56 0.16287 3.19336 2.92195 2.89250 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 57 2.56699 2.53830 3.08261 0.22515 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 58 2.56699 2.53830 3.08261 0.22515 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 59 2.56699 2.53830 3.08261 0.22515 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 60 2.79060 0.21296 3.36605 2.34440 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 61 2.79060 0.21296 3.36605 2.34440 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 62 2.56699 2.53830 3.08261 0.22515 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 63 2.65288 3.52414 0.15664 3.09966 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 64 0.16287 3.19336 2.92195 2.89250 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 65 2.59992 1.58913 2.33695 0.47001 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 66 2.88298 2.08135 2.53067 0.30156 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 67 3.35233 0.20790 3.03297 2.25821 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 68 0.36929 2.85244 1.70257 2.67576 71 A - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 69 3.37292 0.20601 3.04180 2.26206 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 70 2.24245 0.47817 2.17802 1.82871 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.02007 3.91853 * 1.46634 0.26236 0.00000 * //