INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD123 ACC RF01156 DESC Small nucleolar RNA SNORD123 STATES 214 NODES 66 CLEN 70 W 88 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:01:45 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 12 EFFN 2.006836 CKSUM 3782925176 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.80 NC 44.60 EFP7GF -8.7156 0.71881 ECMLC 0.70667 -4.97851 3.21349 1600000 392048 0.003061 ECMGC 0.43268 -16.73352 -4.10015 1600000 94629 0.004227 ECMLI 0.62287 -3.90935 5.00297 1600000 309070 0.003883 ECMGI 0.45757 -11.43408 -0.15002 1600000 69889 0.005723 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 88 108 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 IL 1 1 2 1 6 1 24 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 24 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 73 G C - - MP 3 2 3 7 6 2 28 88 108 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -3.857 -2.745 -3.825 0.775 -3.967 -4.311 0.542 -4.084 -3.842 3.231 -4.210 -0.446 0.624 -3.762 -1.467 -2.751 ML 4 2 3 7 6 1 22 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 21 86 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 17 83 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 23 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 24 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 72 G C - - MP 9 8 6 13 6 2 27 86 106 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.803 -3.123 -4.908 0.159 -5.319 -4.718 -0.668 -5.155 -4.368 3.653 -4.700 -0.824 -1.052 -4.508 -2.709 -3.784 ML 10 8 6 13 6 1 21 84 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 21 84 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 16 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 23 85 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 23 85 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 71 U A - - MP 15 14 6 19 6 2 26 84 104 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.262 -4.089 -4.093 -0.379 -3.019 -4.650 1.311 -3.720 -4.097 -0.136 -4.466 -1.986 3.361 -4.411 -0.693 -2.914 ML 16 14 6 19 6 1 21 82 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 20 82 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 16 80 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 22 83 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 22 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 70 G C - - MP 21 20 6 25 6 2 24 82 102 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.803 -3.123 -4.908 0.159 -5.319 -4.718 -0.668 -5.155 -4.368 3.653 -4.700 -0.824 -1.052 -4.508 -2.709 -3.784 ML 22 20 6 25 6 1 20 80 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 19 80 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 15 78 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 21 81 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 21 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 69 A U - - MP 27 26 6 31 6 2 23 80 100 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -3.847 -2.864 -3.862 3.367 -4.227 -5.295 0.076 -3.900 -3.751 1.018 -4.301 -0.331 -0.341 -4.473 -1.864 -2.692 ML 28 26 6 31 6 1 19 79 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 18 78 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 15 77 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 20 79 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 20 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 68 A U - - MP 33 32 6 37 4 2 21 78 98 -6.979 -7.186 -0.052 -5.600 -3.322 -0.837 -3.395 3.081 -3.801 -4.552 0.259 -3.612 -3.376 1.457 -3.915 -0.190 -0.001 -3.736 -1.572 -2.345 ML 34 32 6 37 4 1 18 78 98 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 16 77 98 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 15 76 97 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 20 79 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 19 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - a - - - ML 39 38 6 41 3 1 19 75 96 -7.993 -0.020 -6.648 0.965 -0.460 -0.760 -0.452 D 40 38 6 41 3 0 14 74 94 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 42 41 3 44 3 1 18 74 95 -7.993 -0.020 -6.648 1.090 -1.131 -0.689 -0.333 D 43 41 3 44 3 0 13 73 93 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 45 44 3 47 3 1 18 73 94 -7.993 -0.020 -6.648 -0.794 -1.015 -1.144 1.308 D 46 44 3 47 3 0 13 72 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 48 47 3 50 3 1 17 72 92 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 49 47 3 50 3 0 12 71 91 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 51 50 3 53 3 1 16 71 91 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 52 50 3 53 3 0 11 70 90 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 15 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 54 53 3 56 3 1 15 70 90 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 55 53 3 56 3 0 11 69 89 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 57 56 3 59 3 1 14 69 89 -7.993 -0.083 -4.266 -1.643 -2.873 1.737 -2.260 D 58 56 3 59 3 0 10 68 88 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 60 59 3 62 3 1 14 68 88 -7.932 -0.021 -6.586 1.704 -2.306 -1.944 -1.842 D 61 59 3 62 3 0 9 67 87 -6.656 -0.982 -1.047 IL 62 62 3 62 3 1 13 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 63 62 3 65 3 1 14 67 87 -7.993 -0.020 -6.648 1.195 -0.609 -1.220 -0.677 D 64 62 3 65 3 0 8 66 86 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - u - - - ML 66 65 3 68 3 1 13 66 86 -7.993 -0.020 -6.648 -0.515 -0.163 -0.986 0.927 D 67 65 3 68 3 0 7 65 85 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 69 68 3 71 3 1 12 65 85 -7.993 -0.020 -6.648 -0.385 -0.208 -1.298 0.972 D 70 68 3 71 3 0 7 63 84 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - c - - - ML 72 71 3 74 3 1 12 64 84 -7.993 -0.020 -6.648 -0.148 0.514 -0.889 0.176 D 73 71 3 74 3 0 6 62 83 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 75 74 3 77 3 1 11 63 83 -7.993 -0.020 -6.648 -0.455 -1.000 -1.489 1.272 D 76 74 3 77 3 0 5 61 82 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 78 77 3 80 3 1 10 62 82 -7.993 -0.020 -6.648 -0.490 -2.034 1.420 -1.443 D 79 77 3 80 3 0 5 60 81 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 81 80 3 83 3 1 10 61 81 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 82 80 3 83 3 0 4 59 79 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - G - - - ML 84 83 3 86 3 1 9 60 80 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 85 83 3 86 3 0 3 58 78 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 87 86 3 89 3 1 8 59 79 -7.993 -0.020 -6.648 -1.035 -1.999 1.486 -1.120 D 88 86 3 89 3 0 3 57 77 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - c - - - ML 90 89 3 92 3 1 8 58 78 -7.993 -0.020 -6.648 -0.005 0.354 -0.454 -0.007 D 91 89 3 92 3 0 2 56 76 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - g - - - ML 93 92 3 95 3 1 7 57 77 -7.993 -0.020 -6.648 -0.057 -1.166 0.806 -0.243 D 94 92 3 95 3 0 2 55 75 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 96 95 3 98 3 1 6 56 75 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 97 95 3 98 3 0 1 54 74 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 99 98 3 101 3 1 5 55 74 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 100 98 3 101 3 0 1 53 73 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 102 101 3 104 3 1 5 54 73 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 103 101 3 104 3 0 0 52 72 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - A - - - ML 105 104 3 107 3 1 4 52 72 -3.211 -0.244 -4.397 1.731 -2.431 -2.057 -1.979 D 106 104 3 107 3 0 0 50 70 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 4 53 73 -1.760 -0.601 -4.460 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - u - - - ML 108 107 3 110 3 1 4 51 71 -4.079 -0.104 -6.592 -0.160 -0.540 -0.841 0.894 D 109 107 3 110 3 0 0 49 69 -6.611 -1.027 -1.003 IL 110 110 3 110 3 1 3 52 72 -1.612 -0.684 -4.313 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - U - - - ML 111 110 3 113 3 1 4 50 69 -7.993 -0.020 -6.648 -0.923 -0.435 -1.665 1.274 D 112 110 3 113 3 0 0 48 68 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - c - - - ML 114 113 3 116 3 1 3 49 68 -7.993 -0.020 -6.648 -0.070 0.758 -1.296 -0.075 D 115 113 3 116 3 0 0 47 67 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - A - - - ML 117 116 3 119 3 1 3 48 67 -7.993 -0.020 -6.648 1.446 -1.225 -1.441 -1.063 D 118 116 3 119 3 0 0 46 66 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - U - - - ML 120 119 3 122 3 1 3 46 66 -7.993 -0.020 -6.648 -0.910 -0.400 -1.653 1.258 D 121 119 3 122 3 0 0 45 65 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - G - - - ML 123 122 3 125 3 1 2 45 65 -7.993 -0.020 -6.648 -0.692 -1.142 1.279 -0.998 D 124 122 3 125 3 0 0 44 64 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - U - - - ML 126 125 3 128 3 1 2 44 64 -7.993 -0.020 -6.648 -1.076 -0.780 -1.811 1.411 D 127 125 3 128 3 0 0 43 63 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - G - - - ML 129 128 3 131 3 1 2 43 63 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 130 128 3 131 3 0 0 42 62 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - A - - - ML 132 131 3 134 3 1 1 42 62 -7.993 -0.117 -3.760 1.731 -2.431 -2.057 -1.979 D 133 131 3 134 3 0 0 41 60 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - C - - - ML 135 134 3 137 3 1 1 41 61 -7.898 -0.022 -6.552 -1.114 1.314 -1.928 -0.342 D 136 134 3 137 3 0 0 40 59 -6.854 -2.367 -0.326 IL 137 137 3 137 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - U - - - ML 138 137 3 140 3 1 1 40 60 -7.898 -0.022 -6.552 -0.801 -0.344 -1.539 1.198 D 139 137 3 140 3 0 0 39 58 -6.854 -0.812 -1.246 IL 140 140 3 140 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - U - - - ML 141 140 3 143 3 1 1 39 58 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 142 140 3 143 3 0 0 38 57 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - G - - - ML 144 143 3 146 3 1 1 38 57 -7.993 -0.084 -4.251 -1.643 -2.873 1.737 -2.260 D 145 143 3 146 3 0 0 37 56 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - A - - - ML 147 146 3 149 3 1 1 37 56 -7.931 -0.021 -6.585 1.704 -2.304 -1.943 -1.840 D 148 146 3 149 3 0 0 36 55 -6.661 -0.977 -1.053 IL 149 149 3 149 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - A - - - ML 150 149 3 152 3 1 1 36 55 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 151 149 3 152 3 0 0 35 54 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - A - - - ML 153 152 3 155 3 1 1 35 54 -7.993 -0.211 -2.922 1.731 -2.431 -2.057 -1.979 D 154 152 3 155 3 0 0 34 53 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - A - - - ML 156 155 3 158 3 1 1 34 53 -7.806 -0.023 -6.460 1.641 -2.055 -1.719 -1.568 D 157 155 3 158 3 0 0 33 52 -7.279 -0.558 -1.671 IL 158 158 3 158 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - A - - - ML 159 158 3 161 3 1 1 33 52 -4.135 -0.100 -6.648 1.731 -2.431 -2.057 -1.979 D 160 158 3 161 3 0 0 31 50 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 34 53 -1.612 -0.684 -4.313 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - u - - - ML 162 161 3 164 3 1 1 31 50 -7.993 -0.020 -6.648 -0.266 -0.057 -0.011 0.280 D 163 161 3 164 3 0 0 30 49 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - G - - - ML 165 164 3 167 3 1 1 30 49 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 166 164 3 167 3 0 0 29 48 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - C - - - ML 168 167 3 170 3 1 1 29 48 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 169 167 3 170 3 0 0 28 47 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - C - - - ML 171 170 3 173 3 1 1 28 47 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 172 170 3 173 3 0 0 27 46 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - A - - - ML 174 173 3 176 3 1 1 27 46 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 175 173 3 176 3 0 0 26 45 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 177 176 3 179 3 1 1 26 45 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 178 176 3 179 3 0 0 25 44 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - C - - - ML 180 179 3 182 3 1 1 25 43 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 181 179 3 182 3 0 0 24 43 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - C - - - ML 183 182 3 185 3 1 1 23 42 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 184 182 3 185 3 0 0 22 41 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - A - - - ML 186 185 3 188 3 1 1 22 41 -7.993 -0.020 -6.648 1.731 -2.431 -2.057 -1.979 D 187 185 3 188 3 0 0 21 40 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - U - - - ML 189 188 3 191 3 1 1 21 40 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 190 188 3 191 3 0 0 20 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - U - - - ML 192 191 3 194 3 1 1 20 39 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - U - - - ML 195 194 3 197 3 1 1 19 37 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - C - - - ML 198 197 3 200 3 1 1 17 36 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 199 197 3 200 3 0 0 17 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - C - - - ML 201 200 3 203 3 1 1 16 35 -7.993 -0.020 -6.648 -1.812 1.643 -2.638 -1.212 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - U - - - ML 204 203 3 206 3 1 1 15 33 -7.993 -0.020 -6.648 -1.540 -1.527 -2.276 1.634 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - G - - - ML 207 206 3 209 3 1 1 13 31 -7.993 -0.020 -6.648 -1.643 -2.873 1.737 -2.260 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - A - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 1.731 -2.431 -2.057 -1.979 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD123 ACC RF01156 DESC Small nucleolar RNA SNORD123 LENG 70 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:01:45 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 12 EFFN 2.247070 CKSUM 3782925176 STATS LOCAL MSV -8.6111 0.71881 STATS LOCAL VITERBI -9.2566 0.71881 STATS LOCAL FORWARD -3.6293 0.71881 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.27682 1.55011 1.41406 1.32540 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 0.00000 * 1 2.10659 2.35032 0.42429 2.04969 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 2 2.56735 3.20630 0.17437 3.15185 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 3 2.92960 1.86564 2.66770 0.32521 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 4 2.56012 3.19789 0.17605 3.14005 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 5 0.36104 2.71803 1.79229 2.65264 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 6 0.49603 2.54142 1.51294 2.38551 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 7 0.69770 1.70652 1.93484 1.73541 7 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 8 0.61153 2.20392 1.88058 1.63678 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 9 1.99989 2.14408 2.22026 0.44802 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 10 2.65288 3.52414 0.15664 3.09966 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 11 0.16287 3.19336 2.92195 2.89250 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 12 2.56699 2.53830 3.08261 0.22515 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 13 2.65288 3.52414 0.15664 3.09966 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08910 3.93820 2.72171 1.46634 0.26236 1.09861 0.40547 14 0.18010 3.10138 2.83911 2.79123 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04172 3.89082 3.89082 1.46634 0.26236 0.46533 0.98867 15 0.53263 1.81699 2.28335 1.90727 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 16 1.77898 1.49751 2.09219 0.72549 16 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 17 1.68000 1.53119 2.32744 0.69354 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 18 1.50530 1.00596 2.02180 1.27318 18 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 19 1.73757 2.13029 2.48024 0.47558 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 20 1.76847 2.88241 0.37182 2.47780 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 21 2.65288 3.52414 0.15664 3.09966 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 22 2.65288 3.52414 0.15664 3.09966 22 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 23 2.18644 2.86280 0.32447 2.22876 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 24 1.40060 1.12088 1.70141 1.40597 24 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 25 1.44413 2.23194 0.79932 1.57458 25 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 26 2.79060 0.21296 3.36605 2.34440 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 27 2.56699 2.53830 3.08261 0.22515 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 28 2.65288 3.52414 0.15664 3.09966 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 29 0.16287 3.19336 2.92195 2.89250 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.21688 2.00853 2.80042 0.26873 1.44541 1.09861 0.40547 30 1.51162 1.77562 1.98471 0.74941 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.10710 2.51028 3.89602 0.44205 1.02923 0.49534 0.93997 31 2.09041 1.70346 2.60769 0.47706 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 32 1.44985 0.83075 2.33172 1.45868 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 33 0.35802 2.27122 2.45015 2.19396 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 34 2.08008 1.67742 2.59808 0.48807 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 35 1.93190 2.21242 0.46224 2.15572 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 36 2.20666 1.96247 2.71888 0.38057 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 37 2.65288 3.52414 0.15664 3.09966 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 38 0.16287 3.19336 2.92195 2.89250 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.11575 3.93820 2.40992 1.46634 0.26236 1.09861 0.40547 39 2.24560 0.43693 2.81708 1.66951 41 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04282 3.86527 3.86527 1.46634 0.26236 1.88862 0.16403 40 1.99759 1.63555 2.51268 0.53028 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04282 3.86527 3.86527 1.46634 0.26236 0.36034 1.19547 41 2.56699 2.53830 3.08261 0.22515 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 42 2.65288 3.52414 0.15664 3.09966 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08977 3.93820 2.71250 1.46634 0.26236 1.09861 0.40547 43 0.18034 3.10014 2.83800 2.78987 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04174 3.89018 3.89018 1.46634 0.26236 0.46191 0.99447 44 0.16287 3.19336 2.92195 2.89250 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 45 0.16287 3.19336 2.92195 2.89250 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.19035 3.93820 1.87177 1.46634 0.26236 1.09861 0.40547 46 0.22136 2.91520 2.67165 2.58706 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04606 3.79391 3.79391 1.46634 0.26236 0.22576 1.59904 47 0.16287 3.19336 2.92195 2.89250 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10245 2.55245 3.93820 0.44205 1.02923 1.09861 0.40547 48 1.59362 1.41619 1.37948 1.19579 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 49 2.65288 3.52414 0.15664 3.09966 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 50 2.79060 0.21296 3.36605 2.34440 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 51 2.79060 0.21296 3.36605 2.34440 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 52 0.16287 3.19336 2.92195 2.89250 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 53 2.56699 2.53830 3.08261 0.22515 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 54 2.79060 0.21296 3.36605 2.34440 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 55 2.79060 0.21296 3.36605 2.34440 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 56 0.16287 3.19336 2.92195 2.89250 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 57 2.56699 2.53830 3.08261 0.22515 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 58 2.56699 2.53830 3.08261 0.22515 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 59 2.56699 2.53830 3.08261 0.22515 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 60 2.79060 0.21296 3.36605 2.34440 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 61 2.79060 0.21296 3.36605 2.34440 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 62 2.56699 2.53830 3.08261 0.22515 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 63 2.65288 3.52414 0.15664 3.09966 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 64 0.16287 3.19336 2.92195 2.89250 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 65 2.60881 1.60108 2.34565 0.46376 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 66 2.88298 2.08135 2.53067 0.30156 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 67 3.35233 0.20790 3.03297 2.25821 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 68 0.36929 2.85244 1.70257 2.67576 71 A - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 69 3.37292 0.20601 3.04180 2.26206 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.03975 3.93820 3.93820 1.46634 0.26236 1.09861 0.40547 70 2.23860 0.47961 2.17529 1.82764 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.02007 3.91853 * 1.46634 0.26236 0.00000 * //