INFERNAL1/a [1.1.5 | Sep 2023] NAME sn3060 ACC RF01153 DESC Small nucleolar RNA sn3060 STATES 205 NODES 64 CLEN 67 W 84 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 23:21:33 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01153/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.573242 CKSUM 2461234812 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 46.50 NC 44.50 EFP7GF -9.2666 0.71886 ECMLC 0.69204 -5.29760 3.04115 1600000 384936 0.003117 ECMGC 0.37199 -19.66638 -4.18490 1600000 126808 0.003154 ECMLI 0.65558 -3.76017 4.64495 1600000 296658 0.004045 ECMGI 0.41046 -13.20131 -0.29635 1600000 79897 0.005006 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 84 104 -9.051 -8.990 -0.110 -3.989 -8.046 -8.441 IL 1 1 2 1 6 1 21 86 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 21 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 67 G C - - MP 3 2 3 7 6 2 25 84 104 -8.964 -8.903 -0.023 -7.680 -7.959 -8.355 -4.016 -2.755 -4.076 0.659 -4.212 -4.386 0.255 -4.245 -3.814 3.400 -4.208 -0.440 -0.156 -3.982 -1.749 -2.964 ML 4 2 3 7 6 1 20 83 103 -7.054 -7.400 -0.603 -1.809 -7.250 -4.780 -0.242 -1.190 1.040 -0.600 MR 5 2 3 7 6 1 18 82 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 14 80 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 20 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 21 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 66 C G - - MP 9 8 6 13 6 2 23 82 102 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 -4.266 -4.145 -4.002 -0.405 -2.786 -4.451 3.453 -3.567 -4.043 -0.120 -4.333 -2.089 0.755 -4.353 -0.487 -2.894 ML 10 8 6 13 6 1 18 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 17 80 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 13 78 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 20 82 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 20 81 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 65 U A - - MP 15 14 6 19 6 2 22 80 100 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 -3.903 -3.717 -3.772 -0.034 -2.778 -4.362 1.543 -3.453 -3.780 0.267 -4.167 -1.625 3.171 -4.064 -0.461 -2.631 ML 16 14 6 19 6 1 17 79 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 16 78 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 13 76 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 19 80 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 19 79 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 64 U A - - MP 21 20 6 25 6 2 20 78 98 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 -3.903 -3.717 -3.772 -0.034 -2.778 -4.362 1.543 -3.453 -3.780 0.267 -4.167 -1.625 3.171 -4.064 -0.461 -2.631 ML 22 20 6 25 6 1 17 77 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 15 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 12 75 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 18 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 18 77 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 63 C G - - MP 27 26 6 31 4 2 18 76 96 -6.794 -7.001 -0.059 -5.415 -4.266 -4.145 -4.002 -0.405 -2.786 -4.451 3.453 -3.567 -4.043 -0.120 -4.333 -2.089 0.755 -4.353 -0.487 -2.894 ML 28 26 6 31 4 1 15 76 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 13 76 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 12 75 95 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 17 77 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - u - - - ML 33 32 6 35 3 1 17 74 94 -7.822 -0.023 -6.476 0.212 -0.764 -1.057 0.825 D 34 32 6 35 3 0 11 72 93 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 36 35 3 38 3 1 16 73 93 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 37 35 3 38 3 0 10 71 92 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 39 38 3 41 3 1 15 72 92 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 40 38 3 41 3 0 10 70 91 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 42 41 3 44 3 1 14 71 91 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 43 41 3 44 3 0 9 69 89 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 45 44 3 47 3 1 14 70 90 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 46 44 3 47 3 0 8 68 88 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 48 47 3 50 3 1 13 69 89 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 49 47 3 50 3 0 7 67 87 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 51 50 3 53 3 1 12 67 88 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 52 50 3 53 3 0 7 66 86 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 54 53 3 56 3 1 12 66 87 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 55 53 3 56 3 0 6 65 85 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 57 56 3 59 3 1 11 65 86 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 58 56 3 59 3 0 5 64 84 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 60 59 3 62 3 1 10 64 84 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 61 59 3 62 3 0 5 63 83 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 9 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 63 62 3 65 3 1 10 63 83 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 64 62 3 65 3 0 4 62 82 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 66 65 3 68 3 1 9 62 82 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 67 65 3 68 3 0 3 61 81 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 69 68 3 71 3 1 8 61 81 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 70 68 3 71 3 0 2 60 80 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 72 71 3 74 3 1 8 60 80 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 73 71 3 74 3 0 2 59 79 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 75 74 3 77 3 1 7 59 79 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 76 74 3 77 3 0 1 58 78 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 78 77 3 80 3 1 6 58 78 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 79 77 3 80 3 0 0 57 77 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 81 80 3 83 3 1 6 57 77 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 82 80 3 83 3 0 0 56 76 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 84 83 3 86 3 1 5 56 76 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 85 83 3 86 3 0 0 54 75 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 87 86 3 89 3 1 5 55 75 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 88 86 3 89 3 0 0 53 73 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 90 89 3 92 3 1 4 54 74 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 91 89 3 92 3 0 0 52 72 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 93 92 3 95 3 1 4 53 73 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 94 92 3 95 3 0 0 51 71 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 96 95 3 98 3 1 3 52 72 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 97 95 3 98 3 0 0 50 70 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 99 98 3 101 3 1 3 51 70 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 100 98 3 101 3 0 0 49 69 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - C - - - ML 102 101 3 104 3 1 2 50 69 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 103 101 3 104 3 0 0 48 68 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 105 104 3 107 3 1 2 49 68 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 106 104 3 107 3 0 0 47 67 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - C - - - ML 108 107 3 110 3 1 2 48 67 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 109 107 3 110 3 0 0 46 66 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 111 110 3 113 3 1 1 46 66 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 112 110 3 113 3 0 0 45 65 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - G - - - ML 114 113 3 116 3 1 1 45 65 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 115 113 3 116 3 0 0 44 64 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 117 116 3 119 3 1 1 44 64 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 118 116 3 119 3 0 0 43 63 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - A - - - ML 120 119 3 122 3 1 1 43 63 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 121 119 3 122 3 0 0 42 62 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - U - - - ML 123 122 3 125 3 1 1 42 62 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 124 122 3 125 3 0 0 41 60 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - G - - - ML 126 125 3 128 3 1 1 41 61 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 127 125 3 128 3 0 0 40 59 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - A - - - ML 129 128 3 131 3 1 1 40 60 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 130 128 3 131 3 0 0 39 58 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - U - - - ML 132 131 3 134 3 1 1 39 58 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 133 131 3 134 3 0 0 38 57 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - U - - - ML 135 134 3 137 3 1 1 38 57 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 136 134 3 137 3 0 0 37 56 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - G - - - ML 138 137 3 140 3 1 1 37 56 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 139 137 3 140 3 0 0 36 55 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - U - - - ML 141 140 3 143 3 1 1 36 55 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 142 140 3 143 3 0 0 34 54 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - G - - - ML 144 143 3 146 3 1 1 35 54 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 145 143 3 146 3 0 0 33 53 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - A - - - ML 147 146 3 149 3 1 1 34 53 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 148 146 3 149 3 0 0 32 52 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - G - - - ML 150 149 3 152 3 1 1 33 52 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 151 149 3 152 3 0 0 31 51 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - G - - - ML 153 152 3 155 3 1 1 31 51 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 154 152 3 155 3 0 0 30 49 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - U - - - ML 156 155 3 158 3 1 1 30 49 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 157 155 3 158 3 0 0 29 48 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - U - - - ML 159 158 3 161 3 1 1 29 48 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 160 158 3 161 3 0 0 28 47 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - A - - - ML 162 161 3 164 3 1 1 28 47 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 163 161 3 164 3 0 0 27 46 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 165 164 3 167 3 1 1 27 46 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 166 164 3 167 3 0 0 26 45 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - G - - - ML 168 167 3 170 3 1 1 26 45 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 169 167 3 170 3 0 0 25 44 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - A - - - ML 171 170 3 173 3 1 1 25 44 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 172 170 3 173 3 0 0 24 43 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - A - - - ML 174 173 3 176 3 1 1 24 42 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 175 173 3 176 3 0 0 23 42 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - A - - - ML 177 176 3 179 3 1 1 22 41 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 178 176 3 179 3 0 0 21 40 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - A - - - ML 180 179 3 182 3 1 1 21 40 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 181 179 3 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - C - - - ML 183 182 3 185 3 1 1 20 39 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - a - - - ML 186 185 3 188 3 1 1 19 38 -7.822 -0.023 -6.476 0.834 -0.879 -0.989 0.227 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - G - - - ML 189 188 3 191 3 1 1 18 36 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 190 188 3 191 3 0 0 17 36 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - C - - - ML 192 191 3 194 3 1 1 16 35 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - U - - - ML 195 194 3 197 3 1 1 15 33 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - G - - - ML 198 197 3 200 3 1 1 13 32 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - A - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 1.650 -2.087 -1.747 -1.602 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 63 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sn3060 ACC RF01153 DESC Small nucleolar RNA sn3060 LENG 67 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 23:21:33 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01153/CM NSEQ 3 EFFN 1.719727 CKSUM 2461234812 STATS LOCAL MSV -7.6269 0.71886 STATS LOCAL VITERBI -8.9942 0.71886 STATS LOCAL FORWARD -3.5411 0.71886 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.16833 1.55155 1.40790 1.45869 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 0.00000 * 1 2.14145 2.52396 0.33363 2.45279 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 2 2.81861 0.34326 2.58338 1.86215 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 3 2.61502 1.66252 2.33605 0.44556 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 4 2.62593 1.66255 2.34008 0.44371 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 5 2.87057 0.33490 2.60547 1.87043 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 6 1.24125 1.93725 2.14380 0.79925 6 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 7 2.36024 3.18629 0.22187 2.76053 7 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 8 2.31209 2.32808 2.81494 0.29631 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 9 2.36024 3.18629 0.22187 2.76053 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 10 0.22121 2.91581 2.67220 2.58773 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 11 2.31209 2.32808 2.81494 0.29631 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 12 2.45633 0.30058 3.02233 2.07807 12 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 13 2.36024 3.18629 0.22187 2.76053 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 14 0.22121 2.91581 2.67220 2.58773 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 15 2.45633 0.30058 3.02233 2.07807 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 16 0.22121 2.91581 2.67220 2.58773 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 17 0.22121 2.91581 2.67220 2.58773 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 18 2.45633 0.30058 3.02233 2.07807 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 19 0.22121 2.91581 2.67220 2.58773 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 20 0.22121 2.91581 2.67220 2.58773 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 21 0.22121 2.91581 2.67220 2.58773 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 22 2.45633 0.30058 3.02233 2.07807 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 23 2.45633 0.30058 3.02233 2.07807 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 24 2.45633 0.30058 3.02233 2.07807 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 25 0.22121 2.91581 2.67220 2.58773 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 26 2.36024 3.18629 0.22187 2.76053 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 27 2.45633 0.30058 3.02233 2.07807 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 28 2.31209 2.32808 2.81494 0.29631 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 29 2.45633 0.30058 3.02233 2.07807 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 30 2.31209 2.32808 2.81494 0.29631 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 31 2.45633 0.30058 3.02233 2.07807 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 32 2.31209 2.32808 2.81494 0.29631 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 33 2.36024 3.18629 0.22187 2.76053 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 34 0.22121 2.91581 2.67220 2.58773 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 35 0.22121 2.91581 2.67220 2.58773 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 36 2.31209 2.32808 2.81494 0.29631 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 37 2.36024 3.18629 0.22187 2.76053 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 38 0.22121 2.91581 2.67220 2.58773 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 39 2.31209 2.32808 2.81494 0.29631 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 40 2.31209 2.32808 2.81494 0.29631 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 41 2.36024 3.18629 0.22187 2.76053 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 42 2.31209 2.32808 2.81494 0.29631 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 43 2.36024 3.18629 0.22187 2.76053 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 44 0.22121 2.91581 2.67220 2.58773 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 45 2.36024 3.18629 0.22187 2.76053 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 46 2.36024 3.18629 0.22187 2.76053 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 47 2.31209 2.32808 2.81494 0.29631 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 48 2.31209 2.32808 2.81494 0.29631 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 49 0.22121 2.91581 2.67220 2.58773 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 50 0.22121 2.91581 2.67220 2.58773 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 51 2.36024 3.18629 0.22187 2.76053 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 52 0.22121 2.91581 2.67220 2.58773 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 53 0.22121 2.91581 2.67220 2.58773 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 54 0.22121 2.91581 2.67220 2.58773 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 55 0.22121 2.91581 2.67220 2.58773 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 56 2.45633 0.30058 3.02233 2.07807 56 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 57 0.79601 2.01577 2.09505 1.22897 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 58 2.36024 3.18629 0.22187 2.76053 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 59 2.45633 0.30058 3.02233 2.07807 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 60 2.31209 2.32808 2.81494 0.29631 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 61 2.36024 3.18629 0.22187 2.76053 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 62 0.22121 2.91581 2.67220 2.58773 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 63 2.14687 2.77610 0.28876 2.63554 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 64 0.50259 2.52324 1.49921 2.39107 64 A - - > 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 65 0.50212 2.52465 1.49919 2.39302 65 A - - > 1.38629 1.38629 1.38629 1.38629 0.04571 3.80140 3.80140 1.46634 0.26236 1.09861 0.40547 66 2.15269 2.78296 0.28643 2.64455 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.23836 3.80140 1.66211 1.46634 0.26236 1.09861 0.40547 67 2.74415 0.36957 2.36716 1.89102 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.02796 3.59100 * 1.46634 0.26236 0.00000 * //