INFERNAL1/a [1.1.5 | Sep 2023] NAME sR17 ACC RF01144 DESC Small nucleolar RNA sR17 STATES 169 NODES 57 CLEN 55 W 128 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 21:40:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01144/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 5.000000 CKSUM 3829538200 NULL 0.000 0.000 0.000 0.000 GA 36.00 TC 36.00 NC 35.90 EFP7GF -10.0627 0.72231 ECMLC 0.69665 -9.35326 0.01048 1600000 816948 0.001469 ECMGC 0.38930 -18.68226 -3.95768 1600000 123466 0.003240 ECMLI 0.62388 -8.66125 1.00496 1600000 499147 0.002404 ECMGI 0.42467 -12.78729 -0.02610 1600000 90284 0.004430 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 128 208 -7.853 -8.060 -0.028 -6.474 IL 1 1 2 1 4 1 17 131 211 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 130 210 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 17 129 209 -6.170 -0.041 -6.170 0.388 -0.142 -1.121 0.406 D 4 2 3 5 3 0 11 126 205 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 18 136 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 16 127 207 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 7 5 3 8 3 0 11 124 204 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 18 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 15 126 206 -6.170 -0.041 -6.170 0.472 0.930 -1.768 -1.273 D 10 8 3 11 3 0 10 123 203 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 17 133 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 15 125 204 -6.170 -0.041 -6.170 0.338 -2.185 1.160 -1.831 D 13 11 3 14 3 0 10 122 201 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 16 132 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 14 123 203 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 16 14 3 17 3 0 9 120 200 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 16 131 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 13 122 202 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 19 17 3 20 3 0 8 119 198 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 15 129 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 13 121 200 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 22 20 3 23 3 0 8 118 197 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 14 128 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 12 120 199 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 25 23 3 26 3 0 7 116 195 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 14 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - a - - - ML 27 26 3 29 3 1 12 118 197 -6.170 -0.041 -6.170 0.928 -1.400 -1.480 0.443 D 28 26 3 29 3 0 7 115 194 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 13 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 11 117 196 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 31 29 3 32 3 0 6 114 192 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 12 124 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 11 116 194 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 34 32 3 35 3 0 6 112 191 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 12 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - a - - - ML 36 35 3 38 3 1 10 114 193 -6.170 -0.041 -6.170 0.375 0.302 -0.204 -0.731 D 37 35 3 38 3 0 5 111 189 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 11 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 39 38 3 41 3 1 10 113 191 -1.758 -0.535 -6.170 0.861 -1.386 -1.464 0.525 D 40 38 3 41 3 0 5 109 188 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 10 114 192 -0.995 -1.005 -15.318 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - G - - - ML 42 41 3 44 3 1 9 111 190 -6.170 -0.041 -6.170 0.338 -2.185 1.160 -1.831 D 43 41 3 44 3 0 4 108 186 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 10 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - c - - - ML 45 44 3 47 3 1 8 110 188 -6.170 -0.041 -6.170 0.472 0.930 -1.768 -1.273 D 46 44 3 47 3 0 4 107 185 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 10 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - G - - - ML 48 47 3 50 3 1 8 109 187 -6.170 -0.041 -6.170 0.338 -2.185 1.160 -1.831 D 49 47 3 50 3 0 3 106 183 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 9 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - A - - - ML 51 50 3 53 3 1 7 107 185 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 52 50 3 53 3 0 3 104 182 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 9 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - a - - - ML 54 53 3 56 3 1 7 106 184 -6.170 -0.041 -6.170 0.898 0.484 -1.685 -1.227 D 55 53 3 56 3 0 2 103 180 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 8 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - C - - - ML 57 56 3 59 3 1 7 105 182 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 58 56 3 59 3 0 2 101 179 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 8 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - u - - - ML 60 59 3 62 3 1 6 103 181 -6.170 -0.041 -6.170 -1.320 -1.440 0.464 0.889 D 61 59 3 62 3 0 2 100 177 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 7 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - G - - - ML 63 62 3 65 3 1 6 102 179 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 64 62 3 65 3 0 1 99 176 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 7 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - C - - - ML 66 65 3 68 3 1 5 101 178 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 67 65 3 68 3 0 1 97 174 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 6 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - u - - - ML 69 68 3 71 3 1 5 99 176 -6.170 -0.041 -6.170 0.363 -1.383 -1.484 0.980 D 70 68 3 71 3 0 1 96 173 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 6 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - c - - - ML 72 71 3 74 3 1 4 98 175 -6.170 -0.041 -6.170 -1.576 0.896 0.486 -1.312 D 73 71 3 74 3 0 0 95 171 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 5 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - u - - - ML 75 74 3 77 3 1 4 97 173 -6.170 -0.041 -6.170 0.449 -1.374 -1.467 0.916 D 76 74 3 77 3 0 0 93 170 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 5 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - G - - - ML 78 77 3 80 3 1 4 95 172 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 79 77 3 80 3 0 0 92 168 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 5 103 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - A - - - ML 81 80 3 83 3 1 3 94 170 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 82 80 3 83 3 0 0 91 167 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 4 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - u - - - ML 84 83 3 86 3 1 3 92 169 -6.170 -0.041 -6.170 0.296 -1.066 -0.090 0.438 D 85 83 3 86 3 0 0 89 165 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 4 100 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - A - - - ML 87 86 3 89 3 1 3 91 167 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 88 86 3 89 3 0 0 88 164 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 3 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - A - - - ML 90 89 3 92 3 1 2 90 166 -6.170 -0.041 -6.170 1.306 -2.071 -0.020 -1.727 D 91 89 3 92 3 0 0 86 162 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 3 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - G - - - ML 93 92 3 95 3 1 2 88 164 -6.170 -0.041 -6.170 -0.304 -2.540 1.485 -2.195 D 94 92 3 95 3 0 0 85 160 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 3 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - U - - - ML 96 95 3 98 3 1 2 87 162 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 97 95 3 98 3 0 0 84 159 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 3 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - G - - - ML 99 98 3 101 3 1 1 85 161 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 100 98 3 101 3 0 0 82 157 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 2 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - A - - - ML 102 101 3 104 3 1 1 84 159 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 103 101 3 104 3 0 0 81 155 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 2 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - U - - - ML 105 104 3 107 3 1 1 83 157 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 106 104 3 107 3 0 0 79 154 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 2 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - G - - - ML 108 107 3 110 3 1 1 81 156 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 109 107 3 110 3 0 0 78 152 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - A - - - ML 111 110 3 113 3 1 1 80 154 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 112 110 3 113 3 0 0 76 150 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - c - - - ML 114 113 3 116 3 1 1 78 152 -6.170 -0.041 -6.170 -0.079 0.703 -0.247 -0.779 D 115 113 3 116 3 0 0 75 149 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - a - - - ML 117 116 3 119 3 1 1 77 151 -6.170 -0.041 -6.170 0.858 -1.980 0.686 -1.625 D 118 116 3 119 3 0 0 73 147 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - a - - - ML 120 119 3 122 3 1 1 75 149 -6.170 -0.041 -6.170 0.943 -1.969 0.580 -1.615 D 121 119 3 122 3 0 0 72 145 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - G - - - ML 123 122 3 125 3 1 1 74 147 -6.170 -0.041 -6.170 -1.604 -0.466 1.403 -1.721 D 124 122 3 125 3 0 0 70 143 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - G - - - ML 126 125 3 128 3 1 1 72 145 -6.170 -0.041 -6.170 -1.604 -0.466 1.403 -1.721 D 127 125 3 128 3 0 0 69 142 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - u - - - ML 129 128 3 131 3 1 1 70 144 -6.170 -0.041 -6.170 -0.986 0.266 -0.150 0.476 D 130 128 3 131 3 0 0 67 140 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - C - - - ML 132 131 3 134 3 1 1 69 142 -6.170 -0.290 -2.572 -3.122 1.844 -3.376 -2.335 D 133 131 3 134 3 0 0 66 139 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - U - - - ML 135 134 3 137 3 1 1 67 140 -5.928 -0.048 -5.928 -2.391 -1.938 -2.577 1.757 D 136 134 3 137 3 0 0 65 138 -13.784 -0.221 -2.818 IL 137 137 3 137 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - C - - - ML 138 137 3 140 3 1 1 66 138 -6.170 -0.041 -6.170 -2.273 1.447 -2.508 -0.167 D 139 137 3 140 3 0 0 62 134 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - G - - - ML 141 140 3 143 3 1 1 64 136 -6.170 -0.486 -1.877 -1.509 -1.935 1.359 -0.281 D 142 140 3 143 3 0 0 60 132 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - c - - - ML 144 143 3 146 3 1 1 63 134 -5.739 -0.055 -5.739 0.251 0.859 -1.246 -0.801 D 145 143 3 146 3 0 0 58 129 -14.399 -4.433 -0.068 IL 146 146 3 146 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - A - - - ML 147 146 3 149 3 1 1 61 132 -5.739 -0.055 -5.739 1.785 -2.611 -2.343 -2.379 D 148 146 3 149 3 0 0 58 129 -14.399 -0.140 -3.433 IL 149 149 3 149 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 52 - C - - - ML 150 149 3 152 3 1 1 58 129 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 151 149 3 152 3 0 0 54 124 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 53 - U - - - ML 153 152 3 155 3 1 1 56 127 -6.170 -0.041 -6.170 -0.123 -1.482 -1.654 1.267 D 154 152 3 155 3 0 0 51 121 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 54 - G - - - ML 156 155 3 158 3 1 1 54 124 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 157 155 3 158 3 0 0 48 117 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - A - - - ML 159 158 3 161 3 1 1 51 121 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 160 158 3 161 3 0 0 43 113 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - g - - - ML 162 161 3 164 3 1 1 47 116 -6.170 -0.041 -6.170 -1.348 -1.562 0.941 0.431 D 163 161 3 164 3 0 0 32 101 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - C - - - ML 165 164 3 167 2 1 1 1 1 * 0.000 -3.122 1.844 -3.376 -2.335 D 166 164 3 167 2 0 0 0 0 * 0.000 IL 167 167 3 167 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 56 ] - - - - - - E 168 167 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR17 ACC RF01144 DESC Small nucleolar RNA sR17 LENG 55 MAXL 128 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Tue Jul 16 21:40:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01144/CM NSEQ 5 EFFN 5.000000 CKSUM 3829538200 STATS LOCAL MSV -7.5646 0.72231 STATS LOCAL VITERBI -8.7077 0.72231 STATS LOCAL FORWARD -3.5412 0.72231 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.15444 1.60465 1.22618 1.65865 1.38629 1.38629 1.38629 1.38629 0.01604 5.44299 4.45781 0.39730 1.11515 0.00000 * 1 1.11711 1.48480 2.16349 1.10472 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 1.05915 0.74158 2.61175 2.26835 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 1.15182 2.90052 0.58222 2.65516 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 6 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 7 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 8 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 9 0.74276 2.35703 2.41190 1.07923 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 1.12669 1.17695 1.52747 1.89316 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 13 0.78960 2.34718 2.40104 1.02245 - a - - : 1.38629 1.38629 1.38629 1.38629 0.37053 1.21825 4.27667 0.69658 0.68973 1.09861 0.40547 14 1.15182 2.90052 0.58222 2.65516 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 15 1.05915 0.74158 2.61175 2.26835 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 16 1.15182 2.90052 0.58222 2.65516 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 17 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 18 0.76379 1.05097 2.55458 2.23701 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 19 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 20 2.30136 2.38422 1.06470 0.77027 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 1.13462 2.34491 2.41510 0.70676 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 2.47898 0.76506 1.04926 2.29594 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 1.07479 2.33861 2.40330 0.75130 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 27 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 28 1.18082 2.12491 1.44881 1.08270 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 29 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 30 0.48077 2.82151 1.39981 2.58318 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 31 1.59713 3.14662 0.35676 2.90803 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 32 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 33 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 34 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 35 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 36 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 38 1.44089 0.89917 1.55731 1.92637 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 0.79131 2.75854 0.91059 2.51238 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 40 0.73236 2.75107 0.98422 2.50549 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 41 2.49793 1.70908 0.41415 2.57949 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 2.49793 1.70908 0.41415 2.57949 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 2.07004 1.20191 1.48998 1.05606 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.20092 4.27667 1.78301 1.46634 0.26236 1.09861 0.40547 45 3.04372 2.72968 3.17264 0.16817 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03340 4.10914 4.10914 1.46634 0.26236 0.15291 1.95341 46 2.96147 0.38326 3.12503 1.50200 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 47 2.43253 2.72754 0.44456 1.58133 - G - - : 1.38629 1.38629 1.38629 1.38629 0.33704 4.27667 1.30109 1.46634 0.26236 1.09861 0.40547 48 1.21198 0.79077 2.24990 1.94152 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03817 3.97779 3.97779 1.46634 0.26236 3.07273 0.04740 49 0.14882 3.19588 3.01043 3.03500 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03817 3.97779 3.97779 1.46634 0.26236 0.09716 2.37959 50 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 51 1.47187 2.41378 2.53296 0.50816 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 52 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 53 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 54 2.32067 2.46931 0.73385 1.08740 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 55 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //