INFERNAL1/a [1.1.5 | Sep 2023] NAME sR18 ACC RF01141 DESC Small nucleolar RNA sR18 STATES 172 NODES 58 CLEN 56 W 129 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 09:09:23 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01141/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 5.000000 CKSUM 3395262584 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 57.90 NC 40.40 EFP7GF -10.4317 0.72075 ECMLC 0.67297 -9.47569 0.04249 1600000 726130 0.001653 ECMGC 0.38415 -19.24319 -4.38635 1600000 120417 0.003322 ECMLI 0.59851 -9.36763 0.86043 1600000 546733 0.002195 ECMGI 0.43215 -12.91187 -0.55058 1600000 83570 0.004786 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 129 209 -7.853 -8.060 -0.028 -6.474 IL 1 1 2 1 4 1 19 131 211 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 131 211 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 19 129 209 -6.170 -0.041 -6.170 0.537 -1.368 -1.455 0.846 D 4 2 3 5 3 0 14 126 206 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 20 136 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 18 128 208 -6.170 -0.041 -6.170 0.316 -2.197 1.175 -1.843 D 7 5 3 8 3 0 13 125 205 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 20 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 18 127 207 -6.170 -0.041 -6.170 1.319 -2.080 -0.046 -1.737 D 10 8 3 11 3 0 12 124 203 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 19 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 17 125 205 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 13 11 3 14 3 0 12 122 202 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 18 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 16 124 204 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 16 14 3 17 3 0 11 121 200 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 18 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 16 123 202 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 19 17 3 20 3 0 10 120 199 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 17 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 15 122 201 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 22 20 3 23 3 0 10 118 198 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 16 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 14 120 200 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 25 23 3 26 3 0 9 117 196 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 16 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 14 119 198 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 28 26 3 29 3 0 9 116 195 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 15 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - c - - - ML 30 29 3 32 3 1 13 118 197 -6.170 -0.041 -6.170 0.325 0.446 -1.190 -0.078 D 31 29 3 32 3 0 8 115 193 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 15 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 13 116 195 -6.170 -0.041 -6.170 1.224 -1.532 -1.634 -0.005 D 34 32 3 35 3 0 8 113 192 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 14 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - c - - - ML 36 35 3 38 3 1 12 115 194 -6.170 -0.041 -6.170 -1.553 0.809 0.588 -1.307 D 37 35 3 38 3 0 7 112 190 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 13 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 11 114 192 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 40 38 3 41 3 0 7 111 189 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 13 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 11 112 191 -6.170 -0.041 -6.170 0.447 -2.129 1.082 -1.775 D 43 41 3 44 3 0 6 109 187 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 12 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 45 44 3 47 3 1 10 111 189 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 46 44 3 47 3 0 6 108 186 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 12 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 1 10 110 188 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 49 47 3 50 3 0 5 107 185 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 11 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - a - - - ML 51 50 3 53 3 1 9 108 186 -6.170 -0.041 -6.170 0.824 0.577 -1.688 -1.226 D 52 50 3 53 3 0 4 105 183 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 10 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - g - - - ML 54 53 3 56 3 1 9 107 185 -6.170 -0.041 -6.170 -1.518 0.500 0.881 -1.342 D 55 53 3 56 3 0 4 104 182 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 10 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 8 106 184 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 58 56 3 59 3 0 3 103 180 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 9 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - g - - - ML 60 59 3 62 3 1 7 104 182 -6.170 -0.041 -6.170 0.765 -2.002 0.792 -1.646 D 61 59 3 62 3 0 3 101 179 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 9 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - C - - - ML 63 62 3 65 3 1 7 103 181 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 64 62 3 65 3 0 2 100 177 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 8 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - c - - - ML 66 65 3 68 3 1 6 102 179 -6.170 -0.041 -6.170 -1.920 0.926 -2.127 0.684 D 67 65 3 68 3 0 2 99 176 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 7 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - c - - - ML 69 68 3 71 3 1 5 100 178 -6.170 -0.041 -6.170 -0.087 0.704 -1.264 0.019 D 70 68 3 71 3 0 2 97 174 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 6 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - u - - - ML 72 71 3 74 3 1 4 99 176 -6.170 -0.041 -6.170 -1.314 -1.448 0.563 0.811 D 73 71 3 74 3 0 1 96 173 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 5 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 75 74 3 77 3 1 3 98 174 -6.170 -0.041 -6.170 0.447 -2.129 1.082 -1.775 D 76 74 3 77 3 0 1 95 171 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 4 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - A - - - ML 78 77 3 80 3 1 2 96 173 -6.170 -0.588 -1.639 1.224 -1.532 -1.634 -0.005 D 79 77 3 80 3 0 0 94 170 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 5 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 81 80 3 83 3 1 3 96 172 -5.641 -0.059 -5.641 -1.800 -1.450 -1.966 1.628 D 82 80 3 83 3 0 0 92 168 -14.616 -4.650 -0.059 IL 83 83 3 83 3 1 4 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 84 83 3 86 3 1 2 94 170 -5.641 -0.059 -5.641 -1.838 -2.631 1.750 -2.349 D 85 83 3 86 3 0 0 92 168 -14.616 -0.120 -3.650 IL 86 86 3 86 3 1 3 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - a - - - ML 87 86 3 89 3 1 2 93 169 -6.170 -0.041 -6.170 0.356 -0.217 0.355 -0.783 D 88 86 3 89 3 0 0 89 165 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 3 100 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 90 89 3 92 3 1 2 91 167 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 91 89 3 92 3 0 0 88 163 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 3 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 93 92 3 95 3 1 2 90 165 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 94 92 3 95 3 0 0 86 162 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 96 95 3 98 3 1 1 88 164 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 97 95 3 98 3 0 0 85 160 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 2 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - G - - - ML 99 98 3 101 3 1 1 87 162 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 100 98 3 101 3 0 0 84 159 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 2 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 102 101 3 104 3 1 1 85 160 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 103 101 3 104 3 0 0 82 157 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 2 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 1 84 159 -1.639 -0.588 -6.170 -2.901 -2.363 -3.099 1.830 D 106 104 3 107 3 0 0 81 155 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 2 84 159 -6.806 -0.013 -14.450 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - G - - - ML 108 107 3 110 3 1 1 83 158 -6.170 -0.041 -6.170 -1.505 -1.925 1.352 -0.265 D 109 107 3 110 3 0 0 79 154 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - A - - - ML 111 110 3 113 3 1 1 81 156 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 112 110 3 113 3 0 0 78 152 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 90 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - G - - - ML 114 113 3 116 3 1 1 80 154 -6.170 -0.041 -6.170 -0.429 -2.607 1.529 -2.265 D 115 113 3 116 3 0 0 76 150 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - u - - - ML 117 116 3 119 3 1 1 78 152 -6.170 -0.041 -6.170 -1.870 0.652 -2.073 0.940 D 118 116 3 119 3 0 0 75 149 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - g - - - ML 120 119 3 122 3 1 1 77 151 -6.170 -0.041 -6.170 -1.518 0.500 0.881 -1.342 D 121 119 3 122 3 0 0 73 147 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - G - - - ML 123 122 3 125 3 1 1 75 149 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 124 122 3 125 3 0 0 72 145 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 126 125 3 128 3 1 1 74 147 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 127 125 3 128 3 0 0 70 143 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - G - - - ML 129 128 3 131 3 1 1 72 145 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 130 128 3 131 3 0 0 69 141 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - g - - - ML 132 131 3 134 3 1 1 71 144 -6.170 -0.041 -6.170 -1.332 -1.522 0.854 0.533 D 133 131 3 134 3 0 0 67 140 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - G - - - ML 135 134 3 137 3 1 1 69 142 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 136 134 3 137 3 0 0 65 138 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - c - - - ML 138 137 3 140 3 1 1 67 140 -6.170 -0.041 -6.170 0.565 0.849 -1.738 -1.254 D 139 137 3 140 3 0 0 64 136 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - u - - - ML 141 140 3 143 3 1 1 66 138 -6.170 -0.588 -1.639 -1.314 -1.448 0.563 0.811 D 142 140 3 143 3 0 0 63 135 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - U - - - ML 144 143 3 146 3 1 1 64 136 -5.641 -0.059 -5.641 -1.800 -1.450 -1.966 1.628 D 145 143 3 146 3 0 0 62 133 -14.616 -0.120 -3.650 IL 146 146 3 146 3 1 1 74 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - A - - - ML 147 146 3 149 3 1 1 62 134 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 148 146 3 149 3 0 0 58 129 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - G - - - ML 150 149 3 152 3 1 1 60 131 -6.170 -0.041 -6.170 -0.326 -2.551 1.493 -2.208 D 151 149 3 152 3 0 0 56 127 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - C - - - ML 153 152 3 155 3 1 1 58 129 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 154 152 3 155 3 0 0 54 124 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - U - - - ML 156 155 3 158 3 1 1 56 127 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 157 155 3 158 3 0 0 51 121 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - G - - - ML 159 158 3 161 3 1 1 54 124 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 160 158 3 161 3 0 0 48 117 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - A - - - ML 162 161 3 164 3 1 1 51 121 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 163 161 3 164 3 0 0 43 113 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - U - - - ML 165 164 3 167 3 1 1 47 116 -6.170 -0.041 -6.170 -1.980 -0.168 -2.189 1.399 D 166 164 3 167 3 0 0 32 101 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - g - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 -1.006 -0.215 0.719 -0.008 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR18 ACC RF01141 DESC Small nucleolar RNA sR18 LENG 56 MAXL 129 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sat Jul 13 09:09:23 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01141/CM NSEQ 5 EFFN 5.000000 CKSUM 3395262584 STATS LOCAL MSV -7.5501 0.72075 STATS LOCAL VITERBI -8.3862 0.72075 STATS LOCAL FORWARD -3.9165 0.72075 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31234 1.71375 1.15094 1.45122 1.38629 1.38629 1.38629 1.38629 0.01604 5.44299 4.45781 0.39730 1.11515 0.00000 * 1 1.01440 2.33464 2.39484 0.79996 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 1.16750 2.90881 0.57160 2.66360 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 0.47206 2.82805 1.41820 2.59019 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 6 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 7 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 8 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 9 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 1.16112 1.07746 2.21100 1.44049 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 0.53794 2.44813 2.51922 1.39000 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 2.46272 0.82577 0.97850 2.29240 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 13 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 14 1.07677 2.86229 0.63659 2.61632 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 15 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 16 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 17 0.81522 0.98613 2.55667 2.23608 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 18 2.43867 1.03952 0.77552 2.31632 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 19 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 20 0.85626 2.77372 0.83715 2.52722 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 2.71704 0.74454 2.86036 0.91198 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 1.44687 0.89830 2.26237 1.37306 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 2.29723 2.39017 0.99637 0.82410 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 1.07677 2.86229 0.63659 2.61632 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 0.53794 2.44813 2.51922 1.39000 - A - - : 1.38629 1.38629 1.38629 1.38629 0.40782 4.27667 1.13628 1.46634 0.26236 1.09861 0.40547 27 2.63392 2.39133 2.74884 0.25787 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04092 3.90977 3.90977 1.46634 0.26236 3.22338 0.04063 28 2.66024 3.20982 0.17360 3.01452 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04092 3.90977 3.90977 1.46634 0.26236 0.08299 2.53023 29 1.13946 1.53677 1.14053 1.92905 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 30 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 31 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 32 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 33 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 34 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 35 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.40782 1.13628 4.27667 0.00898 4.71728 1.09861 0.40547 36 2.42975 2.72091 0.44939 1.56971 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 38 1.68384 3.19306 0.32672 2.95637 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 2.68262 0.93463 2.82328 0.73507 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 40 2.43867 1.03952 0.77552 2.31632 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 41 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 2.30936 2.44147 0.79438 1.01671 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 45 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 46 0.99492 0.79747 2.59128 2.25517 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 47 2.29723 2.39017 0.99637 0.82410 - u - - : 1.38629 1.38629 1.38629 1.38629 0.40782 4.27667 1.13628 1.46634 0.26236 1.09861 0.40547 48 2.63392 2.39133 2.74884 0.25787 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04092 3.90977 3.90977 1.46634 0.26236 0.08299 2.53023 49 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 50 1.61221 3.15478 0.35128 2.91650 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 51 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 52 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 53 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 54 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 55 2.75876 1.50258 2.90387 0.41663 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 56 2.08375 1.53526 0.88795 1.39174 - g - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //