INFERNAL1/a [1.1.5 | Sep 2023] NAME sR39 ACC RF01122 DESC Small nucleolar RNA sR39 STATES 172 NODES 58 CLEN 56 W 135 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 10:20:15 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01122/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 3.930664 CKSUM 4102963423 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 73.70 NC 35.40 EFP7GF -9.7301 0.71904 ECMLC 0.75675 -9.09438 -0.03068 1600000 1142808 0.001050 ECMGC 0.40752 -19.75928 -5.54467 1600000 131163 0.003050 ECMLI 0.66011 -9.16677 0.67495 1600000 795500 0.001508 ECMGI 0.43614 -13.40419 -1.05755 1600000 87235 0.004585 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 135 216 -7.597 -7.804 -0.034 -6.218 IL 1 1 2 1 4 1 18 137 218 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 136 218 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 17 135 217 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 4 2 3 5 3 0 12 132 213 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 19 142 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 17 134 215 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 7 5 3 8 3 0 12 131 212 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 18 140 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 1 16 132 214 -5.938 -0.048 -5.938 -1.854 1.336 -2.069 -0.059 D 10 8 3 11 3 0 11 129 210 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 17 139 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 15 131 212 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 13 11 3 14 3 0 10 128 209 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 17 138 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 15 130 211 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 16 14 3 17 3 0 10 127 207 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 16 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 14 128 209 -5.938 -0.048 -5.938 -2.412 -1.955 -2.598 1.761 D 19 17 3 20 3 0 9 125 206 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 15 135 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 13 127 208 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 22 20 3 23 3 0 8 124 205 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 15 134 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 13 126 207 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 25 23 3 26 3 0 8 123 203 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 14 133 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - a - - - ML 27 26 3 29 3 1 12 125 205 -5.938 -0.048 -5.938 0.275 -0.260 -0.146 0.073 D 28 26 3 29 3 0 7 121 202 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 13 131 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 11 123 204 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 31 29 3 32 3 0 6 120 200 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 13 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 11 122 202 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 34 32 3 35 3 0 6 119 199 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 12 129 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - c - - - ML 36 35 3 38 3 1 10 121 201 -5.938 -0.048 -5.938 0.303 0.338 -1.011 0.009 D 37 35 3 38 3 0 5 117 197 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 11 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 9 119 199 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 40 38 3 41 3 0 5 116 196 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 11 126 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 9 118 198 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 43 41 3 44 3 0 4 115 194 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 10 125 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 8 117 196 -5.938 -0.048 -5.938 -2.412 -1.955 -2.598 1.761 D 46 44 3 47 3 0 3 113 193 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 10 124 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 48 47 3 50 3 1 8 115 195 -5.938 -0.048 -5.938 -2.412 -1.955 -2.598 1.761 D 49 47 3 50 3 0 3 112 191 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 9 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 7 114 193 -5.938 -0.048 -5.938 -2.412 -1.955 -2.598 1.761 D 52 50 3 53 3 0 2 111 190 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 8 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 54 53 3 56 3 1 6 113 192 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 55 53 3 56 3 0 2 109 188 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 8 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 6 111 190 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 58 56 3 59 3 0 1 108 187 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 7 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 60 59 3 62 3 1 5 110 189 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 61 59 3 62 3 0 1 107 185 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 7 117 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 5 109 187 -5.938 -0.048 -5.938 -2.412 -1.955 -2.598 1.761 D 64 62 3 65 3 0 0 105 184 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 6 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 66 65 3 68 3 1 4 107 186 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 67 65 3 68 3 0 0 104 182 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 6 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 69 68 3 71 3 1 4 106 184 -5.938 -0.048 -5.938 -1.260 -1.637 1.270 -0.236 D 70 68 3 71 3 0 0 103 181 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 5 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 72 71 3 74 3 1 4 105 183 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 73 71 3 74 3 0 0 101 179 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 5 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 75 74 3 77 3 1 3 103 181 -5.938 -0.048 -5.938 -1.616 -0.111 -1.811 1.300 D 76 74 3 77 3 0 0 100 178 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 4 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 3 102 180 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 79 77 3 80 3 0 0 99 176 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 4 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 81 80 3 83 3 1 2 100 178 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 82 80 3 83 3 0 0 97 174 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 3 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - a - - - ML 84 83 3 86 3 1 2 99 176 -5.938 -0.048 -5.938 0.670 -0.226 -0.990 0.071 D 85 83 3 86 3 0 0 96 173 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 3 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - a - - - ML 87 86 3 89 3 1 2 98 175 -5.938 -0.048 -5.938 0.275 -0.260 -0.146 0.073 D 88 86 3 89 3 0 0 94 171 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 3 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - a - - - ML 90 89 3 92 3 1 1 96 173 -5.938 -0.048 -5.938 0.275 -0.167 -0.180 0.024 D 91 89 3 92 3 0 0 93 169 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 2 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - g - - - ML 93 92 3 95 3 1 1 95 172 -5.938 -0.048 -5.938 -0.188 -1.161 0.802 -0.103 D 94 92 3 95 3 0 0 91 167 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - u - - - ML 96 95 3 98 3 1 1 93 170 -1.860 -1.085 -1.982 -0.106 -0.939 -0.077 0.679 D 97 95 3 98 3 0 0 88 164 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 2 97 173 -0.415 -2.000 -15.962 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - U - - - ML 99 98 3 101 3 1 1 89 165 -5.548 -0.063 -5.548 -1.621 -1.302 -1.779 1.574 D 100 98 3 101 3 0 0 87 163 -14.097 -0.175 -3.131 IL 101 101 3 101 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - G - - - ML 102 101 3 104 3 1 1 87 163 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 103 101 3 104 3 0 0 84 159 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - A - - - ML 105 104 3 107 3 1 1 86 161 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 106 104 3 107 3 0 0 82 158 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - U - - - ML 108 107 3 110 3 1 1 84 160 -5.938 -0.048 -5.938 -1.231 -1.270 -0.226 1.204 D 109 107 3 110 3 0 0 81 156 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - G - - - ML 111 110 3 113 3 1 1 83 158 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 112 110 3 113 3 0 0 79 154 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 42 - A - - - ML 114 113 3 116 3 1 1 81 156 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 115 113 3 116 3 0 0 78 152 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 43 - g - - - ML 117 116 3 119 3 1 1 80 155 -5.938 -0.048 -5.938 -0.131 0.243 0.334 -0.638 D 118 116 3 119 3 0 0 76 151 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 44 - U - - - ML 120 119 3 122 3 1 1 78 153 -5.938 -0.048 -5.938 -2.412 -1.955 -2.598 1.761 D 121 119 3 122 3 0 0 75 149 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - A - - - ML 123 122 3 125 3 1 1 77 151 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 124 122 3 125 3 0 0 73 147 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - C - - - ML 126 125 3 128 3 1 1 75 149 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 127 125 3 128 3 0 0 71 145 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - C - - - ML 129 128 3 131 3 1 1 73 147 -5.938 -0.048 -5.938 -1.811 1.290 -2.023 0.033 D 130 128 3 131 3 0 0 70 143 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - C - - - ML 132 131 3 134 3 1 1 72 145 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 133 131 3 134 3 0 0 68 141 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - U - - - ML 135 134 3 137 3 1 1 70 143 -5.938 -0.048 -5.938 -1.593 -0.019 -1.788 1.258 D 136 134 3 137 3 0 0 66 139 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - C - - - ML 138 137 3 140 3 1 1 68 141 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 139 137 3 140 3 0 0 65 137 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 78 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - G - - - ML 141 140 3 143 3 1 1 67 139 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 142 140 3 143 3 0 0 63 135 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - C - - - ML 144 143 3 146 3 1 1 65 137 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 145 143 3 146 3 0 0 61 132 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - A - - - ML 147 146 3 149 3 1 1 63 135 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 148 146 3 149 3 0 0 59 130 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - A - - - ML 150 149 3 152 3 1 1 61 133 -5.938 -0.048 -5.938 1.190 -1.708 0.033 -1.361 D 151 149 3 152 3 0 0 57 128 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - C - - - ML 153 152 3 155 3 1 1 59 130 -5.938 -0.048 -5.938 -2.673 1.786 -2.910 -1.941 D 154 152 3 155 3 0 0 54 125 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - u - - - ML 156 155 3 158 3 1 1 57 128 -5.938 -0.048 -5.938 -1.531 0.478 -1.722 0.970 D 157 155 3 158 3 0 0 52 122 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - G - - - ML 159 158 3 161 3 1 1 54 125 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 160 158 3 161 3 0 0 48 118 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - A - - - ML 162 161 3 164 3 1 1 52 121 -5.938 -0.048 -5.938 1.854 -3.134 -2.835 -2.920 D 163 161 3 164 3 0 0 44 113 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - G - - - ML 165 164 3 167 3 1 1 48 117 -5.938 -0.048 -5.938 -2.294 -3.269 1.835 -2.994 D 166 164 3 167 3 0 0 32 101 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - C - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 -2.673 1.786 -2.910 -1.941 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR39 ACC RF01122 DESC Small nucleolar RNA sR39 LENG 56 MAXL 135 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Jul 10 10:20:15 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01122/CM NSEQ 5 EFFN 3.930664 CKSUM 4102963423 STATS LOCAL MSV -7.6073 0.71904 STATS LOCAL VITERBI -8.3487 0.71904 STATS LOCAL FORWARD -3.7508 0.71904 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.28492 1.45510 1.31543 1.50693 1.38629 1.38629 1.38629 1.38629 0.01918 5.26598 4.28080 0.39730 1.11515 0.00000 * 1 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 2 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 3 2.67122 0.46000 2.82054 1.42723 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 4 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 5 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 6 3.05796 2.74147 3.18726 0.16575 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 7 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 8 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 9 1.19599 1.56649 1.48771 1.33587 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 10 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 11 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 12 1.17636 1.15230 2.08708 1.37974 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 13 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 14 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 15 3.05796 2.74147 3.18726 0.16575 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 16 3.05796 2.74147 3.18726 0.16575 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 17 3.05796 2.74147 3.18726 0.16575 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 18 3.23895 0.14801 3.40320 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 19 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 20 3.23895 0.14801 3.40319 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 21 3.05796 2.74147 3.18726 0.16575 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 22 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 23 2.25973 2.52069 0.50602 1.54963 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 24 3.23895 0.14801 3.40319 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 25 2.50633 1.46342 2.64182 0.48490 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 26 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 27 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 28 0.92222 1.54262 2.07260 1.33681 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 29 1.19599 1.56649 1.48771 1.33587 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 30 1.19544 1.50237 1.51113 1.36976 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 31 1.51673 2.19107 0.83007 1.45777 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 32 1.45967 2.03737 1.43966 0.91552 - u - - : 1.38629 1.38629 1.38629 1.38629 0.75218 1.28893 1.37398 1.38661 0.28758 1.09861 0.40547 33 2.51019 2.28897 2.61930 0.29501 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04368 3.84567 3.84567 1.46634 0.26236 0.12124 2.17000 34 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 35 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 36 2.23990 2.26671 1.54269 0.55152 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 37 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 38 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 39 1.47702 1.21756 1.15482 1.82874 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 40 3.05796 2.74147 3.18726 0.16575 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 41 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 42 3.23895 0.14801 3.40319 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 43 2.64166 0.49198 2.78865 1.36322 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 44 3.23895 0.14801 3.40320 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 45 2.49082 1.39933 2.62550 0.51418 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 46 3.23895 0.14801 3.40319 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 47 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 48 3.23895 0.14801 3.40319 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 49 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 50 0.56148 2.57039 1.36333 2.32971 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 51 3.23895 0.14801 3.40319 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 52 2.44724 1.05516 2.57985 0.71428 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 53 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 54 0.10152 3.55870 3.35143 3.41047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 55 2.97603 3.65203 0.11463 3.46182 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03317 4.11589 4.11589 1.46634 0.26236 1.09861 0.40547 56 3.23895 0.14801 3.40320 2.73180 - C - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //