INFERNAL1/a [1.1.5 | Sep 2023] NAME TLS-PK6 ACC RF01101 DESC Pseudoknot of tRNA-like structure STATES 124 NODES 39 CLEN 40 W 55 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 16:31:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01101/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 3.000000 CKSUM 763504000 NULL 0.000 0.000 0.000 0.000 GA 44.00 TC 62.50 NC 32.00 EFP7GF -6.9004 0.73181 ECMLC 0.53330 -10.50216 1.58678 1600000 756969 0.001585 ECMGC 0.43802 -16.36362 -2.04698 1600000 211602 0.001890 ECMLI 0.56949 -7.47660 2.76195 1600000 408727 0.002936 ECMGI 0.45997 -13.65854 -0.51869 1600000 168614 0.002372 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 55 74 -7.331 -7.538 -0.041 -5.952 IL 1 1 2 1 4 1 6 59 79 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 6 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 7 55 74 -8.323 -0.016 -6.977 1.837 -3.097 -2.659 -2.714 D 4 2 3 5 3 0 0 54 73 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 5 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 6 54 73 -8.323 -0.016 -6.977 0.321 -1.891 1.057 -1.319 D 7 5 3 8 3 0 0 52 72 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 4 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 5 53 72 -8.323 -0.016 -6.977 0.321 -1.891 1.057 -1.319 D 10 8 3 11 3 0 0 51 71 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 4 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 5 52 71 -8.323 -0.016 -6.977 -2.322 -3.642 1.847 -3.026 D 13 11 3 14 3 0 0 50 70 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 3 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 15 14 3 17 3 1 4 51 70 -8.323 -0.016 -6.977 -0.677 -1.369 0.916 0.138 D 16 14 3 17 3 0 0 49 69 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 2 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 4 50 69 -8.323 -0.016 -6.977 -2.168 -2.049 -2.929 1.767 D 19 17 3 20 3 0 0 48 68 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 2 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 3 48 68 -8.323 -0.016 -6.977 1.837 -3.097 -2.659 -2.714 D 22 20 3 23 3 0 0 47 67 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 3 47 66 -8.323 -0.016 -6.977 1.837 -3.097 -2.659 -2.714 D 25 23 3 26 3 0 0 46 65 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 2 46 65 -8.323 -0.016 -6.977 1.837 -3.097 -2.659 -2.714 D 28 26 3 29 3 0 0 45 64 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 2 45 64 -8.323 -0.016 -6.977 1.025 -0.067 -1.372 -0.680 D 31 29 3 32 3 0 0 44 63 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - C - - - ML 33 32 3 35 3 1 2 44 63 -8.323 -0.016 -6.977 -2.619 1.795 -3.443 -1.863 D 34 32 3 35 3 0 0 43 62 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 1 43 62 -8.323 -0.016 -6.977 -2.619 1.795 -3.443 -1.863 D 37 35 3 38 3 0 0 42 61 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - c - - - ML 39 38 3 41 3 1 1 42 61 -8.323 -0.016 -6.977 -1.103 0.947 -1.945 0.429 D 40 38 3 41 3 0 0 41 60 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - c - - - ML 42 41 3 44 3 1 1 41 60 -8.323 -0.016 -6.977 -1.103 0.947 -1.945 0.429 D 43 41 3 44 3 0 0 40 59 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 1 40 59 -8.693 -0.015 -7.010 -1.056 0.180 -1.842 1.075 D 46 44 3 47 3 0 0 39 57 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 40 - C - - MR 48 47 3 50 3 1 1 39 58 -8.693 -0.015 -7.010 -2.619 1.795 -3.443 -1.863 D 49 47 3 50 3 0 0 37 56 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 39 - C - - MR 51 50 3 53 3 1 1 38 57 -8.693 -0.015 -7.010 -2.619 1.795 -3.443 -1.863 D 52 50 3 53 3 0 0 36 55 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 38 - C - - MR 54 53 3 56 3 1 1 37 56 -8.693 -0.015 -7.010 -2.619 1.795 -3.443 -1.863 D 55 53 3 56 3 0 0 35 54 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 37 - G - - MR 57 56 3 59 3 1 1 36 55 -8.693 -0.015 -7.010 -2.322 -3.642 1.847 -3.026 D 58 56 3 59 3 0 0 34 53 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 36 - C - - MR 60 59 3 62 3 1 1 35 54 -8.693 -0.015 -7.010 -2.619 1.795 -3.443 -1.863 D 61 59 3 62 3 0 0 33 52 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 35 - A - - MR 63 62 3 65 3 1 1 34 53 -8.693 -0.015 -7.010 1.837 -3.097 -2.659 -2.714 D 64 62 3 65 3 0 0 32 51 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 34 - U - - MR 66 65 3 68 3 1 1 33 52 -8.693 -0.015 -7.010 -2.168 -2.049 -2.929 1.767 D 67 65 3 68 3 0 0 31 50 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 1 34 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 33 - U - - MR 69 68 3 71 3 1 1 32 51 -8.693 -0.015 -7.010 -2.168 -2.049 -2.929 1.767 D 70 68 3 71 3 0 0 30 49 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 1 33 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 32 - A - - MR 72 71 3 74 3 1 1 31 50 -8.693 -0.015 -7.010 1.837 -3.097 -2.659 -2.714 D 73 71 3 74 3 0 0 29 48 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 32 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 31 - U - - MR 75 74 3 77 3 1 1 30 49 -8.693 -0.015 -7.010 -2.168 -2.049 -2.929 1.767 D 76 74 3 77 3 0 0 28 47 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 31 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 30 - U - - MR 78 77 3 80 5 1 1 29 48 -7.411 -0.031 -7.227 -7.439 -8.330 -2.168 -2.049 -2.929 1.767 D 79 77 3 80 5 0 0 27 46 -5.352 -0.707 -2.978 -4.409 -2.404 IR 80 80 3 80 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 29 C G - - MP 81 80 3 85 6 2 2 28 47 -9.266 -9.205 -0.019 -7.982 -8.261 -8.656 -5.348 -5.320 -4.896 -1.500 -3.462 -5.201 3.738 -4.352 -4.984 -1.348 -5.146 -3.290 -0.044 -5.361 -1.200 -3.801 ML 82 80 3 85 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 28 G C - - MP 87 86 6 91 6 2 2 26 45 -9.266 -9.205 -0.019 -7.982 -8.261 -8.656 -5.440 -3.434 -5.640 -0.286 -6.206 -4.955 -1.397 -5.907 -4.753 3.769 -5.047 -1.169 -1.766 -4.916 -3.477 -4.506 ML 88 86 6 91 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 27 C G - - MP 93 92 6 97 4 2 2 24 43 -7.331 -7.538 -0.041 -5.952 -5.348 -5.320 -4.896 -1.500 -3.462 -5.201 3.738 -4.352 -4.984 -1.348 -5.146 -3.290 -0.044 -5.361 -1.200 -3.801 ML 94 92 6 97 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 19 - C - - - ML 99 98 6 101 3 1 1 21 40 -8.323 -0.016 -6.977 -2.619 1.795 -3.443 -1.863 D 100 98 6 101 3 0 0 20 39 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - U - - - ML 102 101 3 104 3 1 1 20 38 -8.323 -0.016 -6.977 -2.168 -2.049 -2.929 1.767 D 103 101 3 104 3 0 0 19 38 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - A - - - ML 105 104 3 107 3 1 1 18 37 -8.323 -0.016 -6.977 1.837 -3.097 -2.659 -2.714 D 106 104 3 107 3 0 0 18 37 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - C - - - ML 108 107 3 110 3 1 1 17 36 -8.323 -0.016 -6.977 -2.619 1.795 -3.443 -1.863 D 109 107 3 110 3 0 0 17 36 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - G - - - ML 111 110 3 113 3 1 1 16 34 -8.323 -0.016 -6.977 -2.322 -3.642 1.847 -3.026 D 112 110 3 113 3 0 0 16 34 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - U - - - ML 114 113 3 116 3 1 1 15 33 -8.323 -0.016 -6.977 -2.168 -2.049 -2.929 1.767 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 25 - A - - - ML 117 116 3 119 3 1 1 13 31 -8.323 -0.016 -6.977 1.837 -3.097 -2.659 -2.714 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - A - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 1.837 -3.097 -2.659 -2.714 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TLS-PK6 ACC RF01101 DESC Pseudoknot of tRNA-like structure LENG 40 MAXL 116 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 16:31:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01101/CM NSEQ 3 EFFN 2.305664 CKSUM 763504000 STATS LOCAL MSV -7.8039 0.73181 STATS LOCAL VITERBI -8.0714 0.73181 STATS LOCAL FORWARD -3.2065 0.73181 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29959 1.24393 1.58826 1.44891 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15786 3.22213 2.94789 2.92422 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 1.16249 2.53325 0.71614 2.12648 2 g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 1.16249 2.53325 0.71614 2.12648 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.68263 3.55806 0.15133 3.13359 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 1.74601 2.21629 0.82507 1.27901 5 g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.59386 2.56057 3.11061 0.21886 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15786 3.22213 2.94789 2.92422 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15786 3.22213 2.94789 2.92422 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15786 3.22213 2.94789 2.92422 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.72702 1.45639 2.21789 1.74445 10 a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.82550 0.20563 3.40135 2.37239 11 C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.82550 0.20563 3.40135 2.37239 12 C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.00113 0.79849 2.56506 1.08502 13 c - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.00113 0.79849 2.56506 1.08502 14 c - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 1.97529 1.28850 2.50937 0.68463 15 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.17393 0.24515 2.94890 2.09410 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.57380 3.22190 0.17256 3.16144 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.17848 0.24464 2.95105 2.09489 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.82550 0.20563 3.40135 2.37239 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.59386 2.56057 3.11061 0.21886 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15786 3.22213 2.94789 2.92422 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.82550 0.20563 3.40135 2.37239 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.68263 3.55806 0.15133 3.13359 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.59386 2.56057 3.11061 0.21886 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15786 3.22213 2.94789 2.92422 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15786 3.22213 2.94789 2.92422 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.37387 3.12075 0.21087 2.93977 27 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.37585 0.20308 3.06117 2.27529 28 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.37676 3.12466 0.21002 2.94452 29 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.59386 2.56057 3.11061 0.21886 30 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.59386 2.56057 3.11061 0.21886 31 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 0.15786 3.22213 2.94789 2.92422 32 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.59386 2.56057 3.11061 0.21886 33 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.59386 2.56057 3.11061 0.21886 34 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15786 3.22213 2.94789 2.92422 35 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.82550 0.20563 3.40135 2.37239 36 C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.68263 3.55806 0.15133 3.13359 37 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.82550 0.20563 3.40135 2.37239 38 C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.82550 0.20563 3.40135 2.37239 39 C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.82550 0.20563 3.40135 2.37239 40 C - - : 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * //