INFERNAL1/a [1.1.5 | Sep 2023] NAME PK-BYV ACC RF01100 DESC 3'-terminal pseudoknot in BYV STATES 124 NODES 35 CLEN 40 W 54 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 22:55:58 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01100/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 2.000000 CKSUM 3859790404 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 59.10 NC 36.00 EFP7GF -4.7859 0.74000 ECMLC 0.73720 -6.24578 2.25204 1600000 630741 0.001903 ECMGC 0.45567 -14.72999 -0.38229 1600000 276302 0.001448 ECMLI 0.62293 -6.22579 3.01241 1600000 378819 0.003168 ECMGI 0.47175 -12.00311 1.17304 1600000 200254 0.001997 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 54 73 -6.977 -7.184 -0.052 -5.598 IL 1 1 2 1 4 1 3 59 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 2 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 3 54 73 -8.380 -0.018 -6.697 -1.806 1.641 -2.632 -1.207 D 4 2 3 5 3 0 0 53 72 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 1 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 40 - G - - MR 6 5 3 8 3 1 2 53 72 -8.380 -0.018 -6.697 -1.638 -2.867 1.736 -2.254 D 7 5 3 8 3 0 0 52 70 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 39 - C - - MR 9 8 3 11 3 1 2 52 71 -8.380 -0.018 -6.697 -1.806 1.641 -2.632 -1.207 D 10 8 3 11 3 0 0 51 69 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 38 - C - - MR 12 11 3 14 3 1 2 51 70 -8.380 -0.018 -6.697 -1.806 1.641 -2.632 -1.207 D 13 11 3 14 3 0 0 50 68 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 37 - G - - MR 15 14 3 17 3 1 1 50 69 -8.380 -0.018 -6.697 -1.638 -2.867 1.736 -2.254 D 16 14 3 17 3 0 0 49 67 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 36 - G - - MR 18 17 3 20 3 1 1 49 68 -8.380 -0.018 -6.697 -1.638 -2.867 1.736 -2.254 D 19 17 3 20 3 0 0 48 66 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 35 - G - - MR 21 20 3 23 3 1 1 48 67 -8.380 -0.018 -6.697 -1.638 -2.867 1.736 -2.254 D 22 20 3 23 3 0 0 47 65 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 34 - A - - MR 24 23 3 26 3 1 1 47 66 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 25 23 3 26 3 0 0 46 64 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 33 - A - - MR 27 26 3 29 3 1 1 46 65 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 28 26 3 29 3 0 0 44 63 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 32 - U - - MR 30 29 3 32 3 1 1 45 64 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 31 29 3 32 3 0 0 43 62 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 31 - A - - MR 33 32 3 35 3 1 1 44 63 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 34 32 3 35 3 0 0 42 61 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 30 - A - - MR 36 35 3 38 3 1 1 43 62 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 37 35 3 38 3 0 0 41 60 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 29 - A - - MR 39 38 3 41 3 1 1 42 61 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 40 38 3 41 3 0 0 40 59 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 28 - A - - MR 42 41 3 44 3 1 1 41 60 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 43 41 3 44 3 0 0 39 58 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 27 - A - - MR 45 44 3 47 3 1 1 40 59 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 46 44 3 47 3 0 0 38 57 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 26 - A - - MR 48 47 3 50 3 1 1 39 58 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 49 47 3 50 3 0 0 37 56 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 25 - G - - MR 51 50 3 53 3 1 1 38 57 -8.380 -0.018 -6.697 -1.638 -2.867 1.736 -2.254 D 52 50 3 53 3 0 0 37 55 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 24 - A - - MR 54 53 3 56 5 1 1 37 56 -7.117 -0.038 -6.932 -7.144 -8.036 1.730 -2.426 -2.052 -1.973 D 55 53 3 56 5 0 0 36 55 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 2 23 U A - - MP 57 56 3 61 6 2 2 36 55 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 58 56 3 61 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 3 22 C G - - MP 63 62 6 67 6 2 2 34 53 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 64 62 6 67 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 4 21 C G - - MP 69 68 6 73 6 2 2 32 51 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 70 68 6 73 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 5 20 U A - - MP 75 74 6 79 6 2 2 30 49 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 76 74 6 79 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 6 19 A U - - MP 81 80 6 85 6 2 2 28 47 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -3.842 -2.861 -3.857 3.364 -4.221 -5.288 0.082 -3.896 -3.747 1.023 -4.297 -0.328 -0.335 -4.467 -1.858 -2.688 ML 82 80 6 85 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 7 18 G C - - MP 87 86 6 91 6 2 2 26 45 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 88 86 6 91 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 8 17 C G - - MP 93 92 6 97 4 2 2 24 43 -6.977 -7.184 -0.052 -5.598 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 94 92 6 97 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 9 - G - - - ML 99 98 6 101 3 1 1 21 40 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 100 98 6 101 3 0 0 20 39 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 10 - A - - - ML 102 101 3 104 3 1 1 20 39 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 103 101 3 104 3 0 0 19 38 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 11 - A - - - ML 105 104 3 107 3 1 1 19 37 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 106 104 3 107 3 0 0 18 37 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 12 - G - - - ML 108 107 3 110 3 1 1 18 36 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 109 107 3 110 3 0 0 17 36 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 13 - U - - - ML 111 110 3 113 3 1 1 16 35 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 112 110 3 113 3 0 0 16 34 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 14 - C - - - ML 114 113 3 116 3 1 1 15 33 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 15 - C - - - ML 117 116 3 119 3 1 1 13 31 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 16 - C - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 -1.806 1.641 -2.632 -1.207 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 34 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PK-BYV ACC RF01100 DESC 3'-terminal pseudoknot in BYV LENG 40 MAXL 119 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 22:55:58 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01100/CM NSEQ 2 EFFN 1.574219 CKSUM 3859790404 STATS LOCAL MSV -7.1735 0.74000 STATS LOCAL VITERBI -8.4442 0.74000 STATS LOCAL FORWARD -2.5086 0.74000 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.16226 1.43712 1.29808 1.73411 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.35864 0.33368 2.92011 2.00070 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.55430 1.61054 2.25408 0.48207 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.79635 0.36312 2.51652 1.81568 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.79812 0.36283 2.51722 1.81594 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.55942 1.61047 2.25584 0.48115 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.55017 2.31797 1.50930 2.26713 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.32872 2.81092 0.24959 2.75972 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.79755 0.36292 2.51700 1.81586 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.27167 3.08250 0.24743 2.65625 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.24274 2.83327 2.59796 2.49763 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.24274 2.83327 2.59796 2.49763 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.27167 3.08250 0.24743 2.65625 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.23783 2.26735 2.73614 0.32172 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.35864 0.33368 2.92011 2.00070 14 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.35864 0.33368 2.92011 2.00070 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.35864 0.33368 2.92011 2.00070 16 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.08879 2.68278 0.31464 2.55438 17 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.97822 0.29149 2.64030 2.03542 18 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.49909 1.75881 2.13425 0.46640 19 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.54822 2.43219 1.44696 2.31370 20 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.09027 2.68443 0.31400 2.55661 21 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.09083 2.68507 0.31375 2.55747 22 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.54776 2.43344 1.44688 2.31550 23 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.24274 2.83327 2.59796 2.49763 24 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.27167 3.08250 0.24743 2.65625 25 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.24274 2.83327 2.59796 2.49763 26 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.24274 2.83327 2.59796 2.49763 27 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.24274 2.83327 2.59796 2.49763 28 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.24274 2.83327 2.59796 2.49763 29 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.24274 2.83327 2.59796 2.49763 30 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.24274 2.83327 2.59796 2.49763 31 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.23783 2.26735 2.73614 0.32172 32 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.24274 2.83327 2.59796 2.49763 33 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.24274 2.83327 2.59796 2.49763 34 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.27167 3.08250 0.24743 2.65625 35 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.27167 3.08250 0.24743 2.65625 36 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.27167 3.08250 0.24743 2.65625 37 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.35864 0.33368 2.92011 2.00070 38 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.35864 0.33368 2.92011 2.00070 39 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.27167 3.08250 0.24743 2.65625 40 G - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //