INFERNAL1/a [1.1.4 | Dec 2020] NAME RF_site1 ACC RF01074 DESC Putative RNA-dependent RNA polymerase ribosomal frameshift site STATES 124 NODES 37 CLEN 40 W 55 ALPH RNA RF no CONS yes MAP yes DATE Thu Jun 6 16:00:55 2019 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 4.000000 CKSUM 3990654070 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 42.00 NC 38.70 EFP7GF -7.7801 0.72896 ECMLC 0.54932 -10.96832 1.47070 1600000 1113519 0.001078 ECMGC 0.39079 -21.50325 -3.23817 1600000 503453 0.000795 ECMLI 0.51915 -10.47590 2.44972 1600000 985059 0.001218 ECMGI 0.41909 -17.37849 -1.11649 1600000 364663 0.001097 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 55 74 -7.615 -7.822 -0.033 -6.236 IL 1 1 2 1 4 1 6 59 79 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 6 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 7 55 74 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 4 2 3 5 3 0 0 53 73 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 5 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 6 54 73 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 7 5 3 8 3 0 0 52 72 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 4 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 6 52 71 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 10 8 3 11 3 0 0 51 71 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 4 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 5 51 70 -8.593 -0.013 -7.247 1.889 -3.622 -3.140 -3.290 D 13 11 3 14 3 0 0 50 69 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 3 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 5 50 69 -8.593 -0.013 -7.247 1.889 -3.622 -3.140 -3.290 D 16 14 3 17 3 0 0 49 68 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 2 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 4 49 68 -8.593 -0.013 -7.247 1.889 -3.622 -3.140 -3.290 D 19 17 3 20 3 0 0 48 67 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 2 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 4 48 67 -8.593 -0.013 -7.247 -1.477 1.181 -2.366 0.238 D 22 20 3 23 3 0 0 47 66 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 2 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 3 47 66 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 25 23 3 26 3 0 0 46 65 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 3 46 65 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 28 26 3 29 3 0 0 45 64 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 2 45 64 -8.593 -0.013 -7.247 0.168 -2.268 1.242 -1.723 D 31 29 3 32 3 0 0 44 63 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - a - - - ML 33 32 3 35 3 1 2 44 63 -2.306 -0.338 -7.247 0.713 0.513 -1.606 -0.723 D 34 32 3 35 3 0 0 42 60 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 44 63 -2.221 -0.410 -4.922 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - g - - - ML 36 35 3 38 3 1 1 42 61 -8.950 -0.012 -7.267 0.760 -2.067 0.781 -1.516 D 37 35 3 38 3 0 0 41 60 -5.620 -0.734 -1.403 IL 38 38 3 38 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 41 - A - - MR 39 38 3 41 3 1 1 41 60 -8.950 -0.012 -7.267 1.227 -0.239 -1.654 -1.018 D 40 38 3 41 3 0 0 40 58 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 40 - C - - MR 42 41 3 44 3 1 1 40 59 -8.950 -0.012 -7.267 -1.069 1.095 -0.290 -0.812 D 43 41 3 44 3 0 0 39 57 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 39 - G - - MR 45 44 3 47 3 1 1 39 58 -8.950 -0.012 -7.267 -2.823 -4.195 1.895 -3.558 D 46 44 3 47 3 0 0 38 56 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 38 - C - - MR 48 47 3 50 3 1 1 38 57 -8.950 -0.012 -7.267 -3.231 1.864 -4.018 -2.379 D 49 47 3 50 3 0 0 37 55 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 37 - C - - MR 51 50 3 53 3 1 1 37 56 -8.950 -0.012 -7.267 -0.161 1.200 -2.041 -0.823 D 52 50 3 53 3 0 0 36 54 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 36 - A - - MR 54 53 3 56 3 1 1 36 55 -8.950 -0.012 -7.267 1.889 -3.622 -3.140 -3.290 D 55 53 3 56 3 0 0 35 53 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 35 - A - - MR 57 56 3 59 3 1 1 35 54 -8.950 -0.012 -7.267 1.889 -3.622 -3.140 -3.290 D 58 56 3 59 3 0 0 34 52 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 34 - C - - MR 60 59 3 62 3 1 1 34 53 -8.950 -0.012 -7.267 -3.231 1.864 -4.018 -2.379 D 61 59 3 62 3 0 0 33 51 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 33 - A - - MR 63 62 3 65 3 1 1 33 52 -8.950 -0.012 -7.267 1.889 -3.622 -3.140 -3.290 D 64 62 3 65 3 0 0 32 50 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 32 - A - - MR 66 65 3 68 3 1 1 32 51 -8.950 -0.321 -2.340 1.889 -3.622 -3.140 -3.290 D 67 65 3 68 3 0 0 31 50 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 31 - a - - MR 69 68 3 71 3 1 1 31 50 -8.644 -0.015 -6.961 0.949 -1.111 -1.245 0.244 D 70 68 3 71 3 0 0 30 49 -8.157 -0.312 -2.387 IR 71 71 3 71 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 30 - G - - MR 72 71 3 74 5 1 1 30 49 -7.656 -0.026 -7.471 -7.683 -8.575 0.168 -2.268 1.242 -1.723 D 73 71 3 74 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 74 74 3 74 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 14 29 G C - - MP 75 74 3 79 6 2 2 29 48 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -4.493 2.061 -4.579 0.378 -5.497 -5.234 -0.944 -4.855 -4.310 3.073 -4.755 -0.664 -1.201 -4.675 -2.900 -3.404 ML 76 74 3 79 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 15 28 G C - - MP 81 80 6 85 6 2 2 27 46 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -5.941 -3.685 -6.268 -0.655 -6.883 -5.136 -1.953 -6.515 -5.029 3.829 -5.299 -1.454 -2.316 -5.228 -4.074 -5.128 ML 82 80 6 85 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 27 C G - - MP 87 86 6 91 6 2 2 25 44 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -5.950 -5.973 -5.383 -2.142 -3.866 -5.609 3.825 -4.822 -5.519 -2.037 -5.588 -3.985 -0.541 -5.921 -1.647 -4.326 ML 88 86 6 91 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 26 G C - - MP 93 92 6 97 6 2 2 23 42 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -5.941 -3.685 -6.268 -0.655 -6.883 -5.136 -1.953 -6.515 -5.029 3.829 -5.299 -1.454 -2.316 -5.228 -4.074 -5.128 ML 94 92 6 97 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 25 G C - - MP 99 98 6 103 4 2 2 21 40 -7.615 -7.822 -0.033 -6.236 -5.941 -3.685 -6.268 -0.655 -6.883 -5.136 -1.953 -6.515 -5.029 3.829 -5.299 -1.454 -2.316 -5.228 -4.074 -5.128 ML 100 98 6 103 4 1 1 23 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 19 - C - - - ML 105 104 6 107 3 1 1 18 37 -8.593 -0.013 -7.247 -3.231 1.864 -4.018 -2.379 D 106 104 6 107 3 0 0 18 37 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - G - - - ML 108 107 3 110 3 1 1 17 36 -8.593 -0.013 -7.247 -0.090 -2.396 1.375 -1.856 D 109 107 3 110 3 0 0 17 35 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - G - - - ML 111 110 3 113 3 1 1 16 34 -8.593 -0.013 -7.247 -0.967 -0.402 1.196 -1.180 D 112 110 3 113 3 0 0 16 34 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - C - - - ML 114 113 3 116 3 1 1 14 33 -8.593 -0.013 -7.247 -3.231 1.864 -4.018 -2.379 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - G - - - ML 117 116 3 119 3 1 1 13 31 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - a - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 0.685 -0.195 -1.277 0.145 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 36 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME RF_site1 ACC RF01074 DESC Putative RNA-dependent RNA polymerase ribosomal frameshift site LENG 40 MAXL 113 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jun 6 16:00:55 2019 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 4 EFFN 3.222656 CKSUM 3990654070 STATS LOCAL MSV -7.3540 0.72896 STATS LOCAL VITERBI -7.9995 0.72896 STATS LOCAL FORWARD -3.0435 0.72896 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.28761 1.29015 1.03767 2.35851 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 3.08273 4.00730 0.09647 3.57751 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 3.08273 4.00730 0.09647 3.57751 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 3.08273 4.00730 0.09647 3.57751 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 0.10288 3.62204 3.31041 3.36573 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 0.10288 3.62204 3.31041 3.36573 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 0.10288 3.62204 3.31041 3.36573 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 2.25112 0.62042 2.84736 1.20730 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 3.08273 4.00730 0.09647 3.57751 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 3.08273 4.00730 0.09647 3.57751 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 1.26173 2.79221 0.57102 2.40130 10 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 0.92066 1.07647 2.37746 1.78283 11 a - - : 1.38629 1.38629 1.38629 1.38629 0.24985 1.58496 4.12713 0.15058 1.96762 1.09861 0.40547 12 0.88498 2.65275 0.88584 2.25901 13 a - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 13 1.12608 2.95864 0.57379 2.80633 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 2.82669 3.60790 0.12248 3.54181 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 3.58461 0.16178 3.41085 2.42347 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 2.83134 3.61424 0.12170 3.55040 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 2.83180 3.61488 0.12162 3.55126 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 3.30711 0.12825 3.87471 2.76492 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 1.42408 2.87796 0.47787 2.48992 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 1.91666 1.66788 0.62633 2.04251 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 3.30711 0.12825 3.87471 2.76492 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 3.08273 4.00730 0.09647 3.57751 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 0.93459 1.52857 2.20260 1.27336 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 24 3.73151 0.14546 3.45957 2.52602 25 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 25 3.73386 0.14531 3.46070 2.52646 26 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 2.70582 3.58278 0.13847 3.36101 27 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 3.74203 0.14481 3.46459 2.52799 28 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 3.04599 0.29981 2.77998 1.90075 29 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 1.26173 2.79221 0.57102 2.40130 30 G - - : 1.38629 1.38629 1.38629 1.38629 0.24985 4.12713 1.58496 1.46634 0.26236 1.09861 0.40547 30 0.76274 2.08589 2.17498 1.21805 31 a - - : 1.38629 1.38629 1.38629 1.38629 0.04058 3.91786 3.91786 1.46634 0.26236 0.14617 1.99520 31 0.10288 3.62204 3.31041 3.36573 32 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 0.10288 3.62204 3.31041 3.36573 33 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 3.30711 0.12825 3.87471 2.76492 34 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 0.10288 3.62204 3.31041 3.36573 35 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 0.10288 3.62204 3.31041 3.36573 36 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 1.46518 0.62029 2.63310 1.83686 37 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 3.30711 0.12825 3.87471 2.76492 38 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 3.08273 4.00730 0.09647 3.57751 39 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 1.97207 0.70364 1.59012 1.81925 40 c - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 0.58145 1.56450 2.40041 1.95870 41 A - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //