INFERNAL1/a [1.1.5 | Sep 2023] NAME RF_site1 ACC RF01074 DESC Putative RNA-dependent RNA polymerase ribosomal frameshift site STATES 124 NODES 37 CLEN 40 W 55 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 04:12:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01074/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 4.000000 CKSUM 3990654070 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 40.50 NC 39.60 EFP7GF -7.8092 0.72887 ECMLC 0.54808 -11.00479 1.46267 1600000 1113688 0.001078 ECMGC 0.38715 -21.74594 -3.29284 1600000 506613 0.000790 ECMLI 0.51953 -10.47688 2.43895 1600000 984904 0.001218 ECMGI 0.42224 -17.30490 -1.14114 1600000 368238 0.001086 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 55 74 -7.615 -7.822 -0.033 -6.236 IL 1 1 2 1 4 1 6 59 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 5 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 7 55 74 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 4 2 3 5 3 0 0 53 73 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 5 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 6 54 73 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 7 5 3 8 3 0 0 52 72 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 4 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 6 52 71 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 10 8 3 11 3 0 0 51 71 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 4 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 5 51 70 -8.593 -0.013 -7.247 1.889 -3.622 -3.140 -3.290 D 13 11 3 14 3 0 0 50 69 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 3 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 5 50 69 -8.593 -0.013 -7.247 1.889 -3.622 -3.140 -3.290 D 16 14 3 17 3 0 0 49 68 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 2 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 4 49 68 -8.593 -0.013 -7.247 1.889 -3.622 -3.140 -3.290 D 19 17 3 20 3 0 0 48 67 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 2 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 4 48 67 -8.593 -0.013 -7.247 -1.502 1.210 -2.392 0.193 D 22 20 3 23 3 0 0 47 66 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 2 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 3 47 66 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 25 23 3 26 3 0 0 46 65 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 3 46 65 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 28 26 3 29 3 0 0 45 64 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 2 45 64 -8.593 -0.013 -7.247 0.113 -2.293 1.273 -1.750 D 31 29 3 32 3 0 0 44 63 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - a - - - ML 33 32 3 35 3 1 2 44 63 -2.368 -0.322 -7.247 0.736 0.487 -1.601 -0.729 D 34 32 3 35 3 0 0 42 60 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 44 63 -2.195 -0.419 -4.895 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - a - - - ML 36 35 3 38 3 1 1 42 61 -8.950 -0.012 -7.267 0.782 -2.063 0.758 -1.513 D 37 35 3 38 3 0 0 41 60 -5.620 -0.734 -1.403 IL 38 38 3 38 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 41 - A - - MR 39 38 3 41 3 1 1 41 60 -8.950 -0.012 -7.267 1.253 -0.290 -1.667 -1.046 D 40 38 3 41 3 0 0 40 58 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 40 - C - - MR 42 41 3 44 3 1 1 40 59 -8.950 -0.012 -7.267 -1.104 1.133 -0.360 -0.830 D 43 41 3 44 3 0 0 39 57 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 39 - G - - MR 45 44 3 47 3 1 1 39 58 -8.950 -0.012 -7.267 -2.823 -4.195 1.895 -3.558 D 46 44 3 47 3 0 0 38 56 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 38 - C - - MR 48 47 3 50 3 1 1 38 57 -8.950 -0.012 -7.267 -3.231 1.864 -4.018 -2.379 D 49 47 3 50 3 0 0 37 55 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 37 - C - - MR 51 50 3 53 3 1 1 37 56 -8.950 -0.012 -7.267 -0.138 1.188 -2.027 -0.816 D 52 50 3 53 3 0 0 36 54 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 36 - A - - MR 54 53 3 56 3 1 1 36 55 -8.950 -0.012 -7.267 1.889 -3.622 -3.140 -3.290 D 55 53 3 56 3 0 0 35 53 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 35 - A - - MR 57 56 3 59 3 1 1 35 54 -8.950 -0.012 -7.267 1.889 -3.622 -3.140 -3.290 D 58 56 3 59 3 0 0 34 52 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 34 - C - - MR 60 59 3 62 3 1 1 34 53 -8.950 -0.012 -7.267 -3.231 1.864 -4.018 -2.379 D 61 59 3 62 3 0 0 33 51 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 33 - A - - MR 63 62 3 65 3 1 1 33 52 -8.950 -0.012 -7.267 1.889 -3.622 -3.140 -3.290 D 64 62 3 65 3 0 0 32 50 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 32 - A - - MR 66 65 3 68 3 1 1 32 51 -8.950 -0.306 -2.401 1.889 -3.622 -3.140 -3.290 D 67 65 3 68 3 0 0 31 50 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 31 - a - - MR 69 68 3 71 3 1 1 31 50 -8.658 -0.015 -6.976 0.953 -1.120 -1.255 0.244 D 70 68 3 71 3 0 0 30 49 -8.113 -0.323 -2.343 IR 71 71 3 71 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 30 - G - - MR 72 71 3 74 5 1 1 30 49 -7.656 -0.026 -7.471 -7.683 -8.575 0.113 -2.293 1.273 -1.750 D 73 71 3 74 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 74 74 3 74 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 14 29 G C - - MP 75 74 3 79 6 2 2 29 48 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -4.502 2.026 -4.586 0.371 -5.502 -5.217 -0.943 -4.868 -4.318 3.092 -4.759 -0.671 -1.200 -4.666 -2.901 -3.414 ML 76 74 3 79 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 15 28 G C - - MP 81 80 6 85 6 2 2 27 46 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -5.941 -3.685 -6.268 -0.655 -6.883 -5.136 -1.953 -6.515 -5.029 3.829 -5.299 -1.454 -2.316 -5.228 -4.074 -5.128 ML 82 80 6 85 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 27 C G - - MP 87 86 6 91 6 2 2 25 44 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -5.950 -5.973 -5.383 -2.142 -3.866 -5.609 3.825 -4.822 -5.519 -2.037 -5.588 -3.985 -0.541 -5.921 -1.647 -4.326 ML 88 86 6 91 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 26 G C - - MP 93 92 6 97 6 2 2 23 42 -9.400 -9.339 -0.017 -8.115 -8.395 -8.790 -5.941 -3.685 -6.268 -0.655 -6.883 -5.136 -1.953 -6.515 -5.029 3.829 -5.299 -1.454 -2.316 -5.228 -4.074 -5.128 ML 94 92 6 97 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 25 G C - - MP 99 98 6 103 4 2 2 21 40 -7.615 -7.822 -0.033 -6.236 -5.941 -3.685 -6.268 -0.655 -6.883 -5.136 -1.953 -6.515 -5.029 3.829 -5.299 -1.454 -2.316 -5.228 -4.074 -5.128 ML 100 98 6 103 4 1 1 23 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 19 - C - - - ML 105 104 6 107 3 1 1 18 37 -8.593 -0.013 -7.247 -3.231 1.864 -4.018 -2.379 D 106 104 6 107 3 0 0 18 37 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - G - - - ML 108 107 3 110 3 1 1 17 36 -8.593 -0.013 -7.247 -0.068 -2.385 1.365 -1.845 D 109 107 3 110 3 0 0 17 35 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - G - - - ML 111 110 3 113 3 1 1 16 34 -8.593 -0.013 -7.247 -0.988 -0.460 1.225 -1.215 D 112 110 3 113 3 0 0 16 34 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - C - - - ML 114 113 3 116 3 1 1 14 33 -8.593 -0.013 -7.247 -3.231 1.864 -4.018 -2.379 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - G - - - ML 117 116 3 119 3 1 1 13 31 -8.593 -0.013 -7.247 -2.823 -4.195 1.895 -3.558 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - a - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 0.667 -0.179 -1.275 0.159 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 36 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME RF_site1 ACC RF01074 DESC Putative RNA-dependent RNA polymerase ribosomal frameshift site LENG 40 MAXL 113 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 04:12:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01074/CM NSEQ 4 EFFN 3.222656 CKSUM 3990654070 STATS LOCAL MSV -7.4007 0.72887 STATS LOCAL VITERBI -7.9933 0.72887 STATS LOCAL FORWARD -3.0481 0.72887 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.28803 1.29016 1.03634 2.36223 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 3.08273 4.00730 0.09647 3.57751 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 3.08273 4.00730 0.09647 3.57751 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 3.08273 4.00730 0.09647 3.57751 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 0.10288 3.62204 3.31041 3.36573 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 0.10288 3.62204 3.31041 3.36573 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 0.10288 3.62204 3.31041 3.36573 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 2.26604 0.60036 2.86362 1.23579 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 3.08273 4.00730 0.09647 3.57751 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 3.08273 4.00730 0.09647 3.57751 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 1.29642 2.80956 0.54944 2.41928 10 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 0.90598 1.09323 2.37434 1.78591 11 a - - : 1.38629 1.38629 1.38629 1.38629 0.23947 1.62545 4.12713 0.15653 1.93174 1.09861 0.40547 12 0.87078 2.64985 0.90144 2.25637 13 a - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 13 1.14370 2.95955 0.56357 2.80765 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 2.82684 3.60810 0.12246 3.54207 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 3.58483 0.16177 3.41097 2.42351 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 2.83140 3.61433 0.12169 3.55051 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 2.83185 3.61493 0.12161 3.55134 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 3.30711 0.12825 3.87471 2.76492 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 1.41041 2.87032 0.48499 2.48205 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 1.92915 1.70506 0.60512 2.06392 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 3.30711 0.12825 3.87471 2.76492 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 3.08273 4.00730 0.09647 3.57751 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 0.94669 1.51848 2.20175 1.26470 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 24 3.73162 0.14545 3.45962 2.52604 25 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 25 3.73400 0.14531 3.46076 2.52649 26 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 2.70587 3.58286 0.13846 3.36110 27 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 3.74224 0.14479 3.46469 2.52802 28 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 3.04753 0.29878 2.78108 1.90494 29 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 1.29642 2.80956 0.54944 2.41928 30 G - - : 1.38629 1.38629 1.38629 1.38629 0.23947 4.12713 1.62545 1.46634 0.26236 1.09861 0.40547 30 0.76002 2.09116 2.18063 1.21798 31 a - - : 1.38629 1.38629 1.38629 1.38629 0.04017 3.92784 3.92784 1.46634 0.26236 0.15177 1.96031 31 0.10288 3.62204 3.31041 3.36573 32 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 0.10288 3.62204 3.31041 3.36573 33 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 3.30711 0.12825 3.87471 2.76492 34 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 0.10288 3.62204 3.31041 3.36573 35 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 0.10288 3.62204 3.31041 3.36573 36 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 1.45154 0.62860 2.62468 1.83265 37 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 3.30711 0.12825 3.87471 2.76492 38 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 3.08273 4.00730 0.09647 3.57751 39 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 1.99130 0.67810 1.63326 1.82878 40 C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 0.56409 1.59737 2.40825 1.97530 41 A - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //