INFERNAL1/a [1.1.5 | Sep 2023] NAME preQ1-II ACC RF01054 DESC PreQ1-II (pre queuosine) riboswitch aptamer STATES 311 NODES 92 CLEN 99 W 194 ALPH RNA RF no CONS yes MAP yes DATE Thu Aug 15 13:48:02 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3Dupdates/OK_update/RF01054/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 2.003174 CKSUM 265732173 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.00 NC 42.70 EFP7GF -8.3151 0.71842 ECMLC 0.64696 -5.76225 3.10144 1600000 371228 0.003233 ECMGC 0.37177 -12.47611 -1.10073 1600000 27461 0.014566 ECMLI 0.54846 -4.69978 5.09070 1600000 257762 0.004655 ECMGI 0.40716 -6.48061 3.86219 1600000 26973 0.014830 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 194 314 -6.978 -7.185 -0.099 -4.284 IL 1 1 2 1 4 12 47 196 317 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 11 47 195 316 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 12 47 194 315 -7.950 -0.021 -6.604 -0.280 -0.922 -1.362 1.176 D 4 2 3 5 3 7 40 191 312 -6.518 -2.031 -0.426 IL 5 5 3 5 3 11 46 194 315 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 12 46 193 314 -7.950 -0.021 -6.604 0.271 -0.240 0.151 -0.259 D 7 5 3 8 3 7 40 190 311 -6.518 -2.031 -0.426 IL 8 8 3 8 3 10 45 193 314 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 11 46 192 313 -7.950 -0.021 -6.604 -0.133 -0.810 -0.854 0.974 D 10 8 3 11 3 6 39 189 310 -6.518 -2.031 -0.426 IL 11 11 3 11 3 10 44 192 313 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 11 45 191 312 -7.950 -0.021 -6.604 -0.557 -0.896 1.144 -0.805 D 13 11 3 14 3 6 38 188 309 -6.518 -2.031 -0.426 IL 14 14 3 14 3 10 44 191 312 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - c - - - ML 15 14 3 17 3 11 44 190 311 -7.950 -0.021 -6.604 -0.077 0.420 -0.465 -0.015 D 16 14 3 17 3 6 38 187 308 -6.518 -2.031 -0.426 IL 17 17 3 17 3 9 43 190 311 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - u - - - ML 18 17 3 20 3 10 43 189 310 -7.950 -0.021 -6.604 -0.133 -0.810 -0.854 0.974 D 19 17 3 20 3 5 37 186 307 -6.518 -2.031 -0.426 IL 20 20 3 20 3 9 42 189 310 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 10 43 188 309 -7.950 -0.021 -6.604 1.713 -2.343 -1.978 -1.883 D 22 20 3 23 3 5 36 185 306 -6.518 -2.031 -0.426 IL 23 23 3 23 3 9 42 188 309 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - u - - - ML 24 23 3 26 3 10 42 187 308 -7.950 -0.021 -6.604 0.349 -0.454 -1.009 0.584 D 25 23 3 26 3 5 36 184 305 -6.518 -2.031 -0.426 IL 26 26 3 26 3 8 41 187 308 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 9 41 186 307 -7.950 -0.021 -6.604 1.449 -1.556 -1.455 -0.822 D 28 26 3 29 3 4 35 183 304 -6.518 -2.031 -0.426 IL 29 29 3 29 3 8 40 186 307 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - c - - - ML 30 29 3 32 3 9 40 185 306 -7.950 -0.021 -6.604 0.073 0.800 -1.305 -0.317 D 31 29 3 32 3 4 34 182 303 -6.518 -2.031 -0.426 IL 32 32 3 32 3 8 39 185 306 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 9 39 184 305 -7.950 -0.021 -6.604 -0.588 -1.016 -1.538 1.320 D 34 32 3 35 3 4 34 181 302 -6.518 -2.031 -0.426 IL 35 35 3 35 3 7 39 185 305 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - a - - - ML 36 35 3 38 3 8 39 183 304 -7.950 -0.021 -6.604 0.681 -1.013 0.046 -0.204 D 37 35 3 38 3 4 33 180 301 -6.518 -2.031 -0.426 IL 38 38 3 38 3 7 38 184 304 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 39 38 3 41 3 8 38 182 303 -7.950 -0.021 -6.604 0.624 -0.680 -0.166 -0.083 D 40 38 3 41 3 3 32 179 300 -6.518 -2.031 -0.426 IL 41 41 3 41 3 7 37 183 303 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - a - - - ML 42 41 3 44 3 8 37 181 302 -4.313 -0.090 -6.604 0.555 -0.808 -0.562 0.358 D 43 41 3 44 3 3 32 178 299 -6.518 -2.031 -0.426 IL 44 44 3 44 3 6 37 181 302 -1.588 -0.699 -4.288 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 45 44 3 47 3 7 36 180 301 -7.950 -0.021 -6.604 1.210 -1.204 -1.217 -0.283 D 46 44 3 47 3 3 31 177 298 -6.518 -2.031 -0.426 IL 47 47 3 47 3 6 36 181 301 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - A - - - ML 48 47 3 50 3 7 35 179 300 -7.950 -0.021 -6.604 1.188 -0.861 -0.895 -0.661 D 49 47 3 50 3 3 31 177 297 -6.518 -2.031 -0.426 IL 50 50 3 50 3 6 35 180 300 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - c - - - ML 51 50 3 53 3 6 34 178 299 -8.342 -0.019 -6.659 0.066 0.255 -0.409 0.011 D 52 50 3 53 3 2 30 176 297 -5.839 -0.952 -1.102 IL 53 53 3 53 3 5 34 178 299 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 132 - G - - MR 54 53 3 56 3 6 34 177 298 -8.342 -0.019 -6.659 -1.551 -2.766 1.717 -2.153 D 55 53 3 56 3 2 29 174 295 -6.685 -1.863 -0.483 IR 56 56 3 56 3 5 33 177 298 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 131 - U - - MR 57 56 3 59 3 6 33 176 297 -8.342 -0.019 -6.659 -1.460 -1.461 -2.192 1.611 D 58 56 3 59 3 2 28 173 294 -6.685 -1.863 -0.483 IR 59 59 3 59 3 4 32 176 297 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 130 - A - - MR 60 59 3 62 3 5 32 175 296 -2.360 -0.330 -6.659 1.282 -1.290 -1.275 -0.423 D 61 59 3 62 3 1 27 172 293 -6.685 -1.863 -0.483 IR 62 62 3 62 3 5 32 175 296 -1.865 -0.523 -5.067 0.000 0.000 0.000 0.000 [ MATR 21 ] - 127 - u - - MR 63 62 3 65 3 5 31 174 295 -8.342 -0.019 -6.659 0.321 -0.560 -0.352 0.366 D 64 62 3 65 3 1 27 171 292 -6.685 -1.863 -0.483 IR 65 65 3 65 3 4 31 174 295 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 126 - a - - MR 66 65 3 68 3 5 30 173 294 -8.342 -0.019 -6.659 0.800 -0.503 -0.999 0.075 D 67 65 3 68 3 1 26 170 291 -6.685 -1.863 -0.483 IR 68 68 3 68 3 4 30 173 294 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 125 - a - - MR 69 68 3 71 3 4 29 172 293 -8.342 -0.019 -6.659 0.710 -0.262 -0.994 0.040 D 70 68 3 71 3 1 25 170 291 -6.685 -1.121 -0.915 IR 71 71 3 71 3 3 29 172 293 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 124 - A - - MR 72 71 3 74 3 4 28 171 292 -8.381 -0.018 -6.698 1.528 -1.865 -1.129 -1.383 D 73 71 3 74 3 1 24 168 289 -6.390 -1.568 -0.620 IR 74 74 3 74 3 3 28 171 292 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 123 - A - - MR 75 74 3 77 3 4 27 170 291 -8.381 -0.018 -6.698 1.731 -2.428 -2.054 -1.976 D 76 74 3 77 3 0 24 168 288 -6.390 -1.568 -0.620 IR 77 77 3 77 3 3 27 170 291 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 122 - G - - MR 78 77 3 80 3 3 26 169 290 -8.381 -0.018 -6.698 -1.640 -2.870 1.737 -2.257 D 79 77 3 80 3 0 23 167 287 -6.390 -1.568 -0.620 IR 80 80 3 80 3 2 26 169 290 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 121 - A - - MR 81 80 3 83 3 3 25 168 289 -8.381 -0.018 -6.698 1.731 -2.428 -2.054 -1.976 D 82 80 3 83 3 0 22 166 287 -6.390 -1.568 -0.620 IR 83 83 3 83 3 2 25 168 289 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 120 - G - - MR 84 83 3 86 3 3 24 167 288 -8.381 -0.018 -6.698 -1.640 -2.870 1.737 -2.257 D 85 83 3 86 3 0 21 165 286 -6.390 -1.568 -0.620 IR 86 86 3 86 3 2 24 167 288 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 119 - G - - MR 87 86 3 89 3 3 23 166 287 -8.381 -0.018 -6.698 -1.640 -2.870 1.737 -2.257 D 88 86 3 89 3 0 21 164 285 -6.390 -1.568 -0.620 IR 89 89 3 89 3 2 23 166 287 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 118 - A - - MR 90 89 3 92 3 2 22 165 286 -8.381 -0.018 -6.698 1.731 -2.428 -2.054 -1.976 D 91 89 3 92 3 0 20 163 284 -6.390 -1.568 -0.620 IR 92 92 3 92 3 2 23 165 286 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 117 - A - - MR 93 92 3 95 3 2 21 164 285 -8.381 -0.018 -6.698 1.731 -2.428 -2.054 -1.976 D 94 92 3 95 3 0 20 162 283 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 22 164 285 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 116 - A - - MR 96 95 3 98 2 1 20 163 284 -8.390 -0.004 1.731 -2.428 -2.054 -1.976 D 97 95 3 98 2 0 19 162 283 -4.432 -0.068 IR 98 98 3 98 2 1 21 163 284 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 33 ] - - - - - - B 99 98 3 178 100 0 19 162 283 [ BEGR 70 ] - - - - - - S 100 99 1 101 3 0 0 119 240 -7.992 -0.020 -6.646 IL 101 101 2 101 3 1 1 120 241 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 73 - C - - - ML 102 101 2 104 3 1 1 119 240 -7.992 -0.020 -6.646 -0.751 1.106 -0.916 -0.467 D 103 101 2 104 3 0 0 116 237 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 119 240 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 74 - A - - - ML 105 104 3 107 3 1 1 118 239 -7.992 -0.020 -6.646 1.290 -1.310 -1.302 -0.422 D 106 104 3 107 3 0 0 115 236 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 118 239 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 75 - U - - - ML 108 107 3 110 3 1 1 117 238 -7.992 -0.020 -6.646 -1.537 -1.525 -2.274 1.633 D 109 107 3 110 3 0 0 114 235 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 117 238 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 76 - A - - - ML 111 110 3 113 3 1 1 116 237 -7.992 -0.020 -6.646 1.731 -2.428 -2.054 -1.976 D 112 110 3 113 3 0 0 113 234 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 116 237 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 77 - U - - - ML 114 113 3 116 3 1 1 115 236 -7.992 -0.020 -6.646 -0.937 -0.472 -1.678 1.289 D 115 113 3 116 3 0 0 112 233 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 115 236 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 78 - U - - - ML 117 116 3 119 3 1 1 114 235 -7.992 -0.020 -6.646 -1.537 -1.525 -2.274 1.633 D 118 116 3 119 3 0 0 111 232 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 114 235 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 77 ] 79 - A - - - ML 120 119 3 122 3 1 1 113 234 -7.992 -0.020 -6.646 1.465 -1.595 -1.498 -0.851 D 121 119 3 122 3 0 0 110 231 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 113 234 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 78 ] 80 - c - - - ML 123 122 3 125 3 1 1 112 233 -7.992 -0.143 -3.468 -0.272 0.606 -0.823 0.117 D 124 122 3 125 3 0 0 110 230 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 113 233 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 79 ] 81 - A - - - ML 126 125 3 128 5 1 1 111 232 -7.013 -0.106 -6.828 -7.040 -4.430 1.675 -2.185 -1.835 -1.709 D 127 125 3 128 5 0 0 109 230 -5.472 -1.316 -4.733 -1.269 -3.021 IL 128 128 3 128 5 1 1 111 232 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 80 ] 82 115 g c - - MP 129 128 3 133 6 2 2 110 231 -9.042 -8.981 -0.022 -7.758 -8.037 -8.432 -1.860 -1.798 -2.048 1.512 -2.012 -0.327 1.465 -1.468 -2.086 1.569 -2.602 -0.208 1.249 -2.154 -0.124 -1.242 ML 130 128 3 133 6 1 1 108 229 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 108 229 -7.462 -6.191 -0.962 -6.169 -1.303 -4.382 -0.127 0.565 -0.835 0.062 D 132 128 3 133 6 0 0 103 224 -9.448 -8.146 -3.943 -4.625 -4.643 -0.235 IL 133 133 5 133 6 1 1 109 230 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 109 230 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 81 ] 83 114 g c - - MP 135 134 6 139 6 2 2 108 229 -9.092 -9.031 -0.021 -7.808 -8.087 -8.482 -3.204 -2.451 -3.218 1.622 -3.296 -3.978 1.055 -3.475 -3.330 2.624 -3.771 -0.207 1.093 -3.273 -0.913 -2.183 ML 136 134 6 139 6 1 1 106 226 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 105 226 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 102 223 -9.448 -8.146 -1.705 -4.625 -4.643 -0.718 IL 139 139 5 139 6 1 1 107 228 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 107 228 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 82 ] 84 113 c g - - MP 141 140 6 145 6 2 2 106 227 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.289 -2.983 -3.312 0.975 -2.661 -4.077 2.650 -3.190 -3.307 1.528 -3.783 -0.831 1.245 -3.487 -0.311 -2.194 ML 142 140 6 145 6 1 1 103 224 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 102 223 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 97 217 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 105 226 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 105 226 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 83 ] 85 112 G C - - MP 147 146 6 151 6 2 2 104 225 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.800 -3.122 -4.905 0.161 -5.315 -4.717 -0.665 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.705 -3.781 ML 148 146 6 151 6 1 1 100 221 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 99 219 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 94 215 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 103 224 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 103 224 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 84 ] 86 111 g c - - MP 153 152 6 157 4 2 2 102 223 -2.542 -7.185 -0.469 -3.339 -3.035 -2.619 -3.081 1.239 -2.763 -3.852 1.858 -3.174 -3.155 2.148 -3.632 -0.500 1.516 -3.170 -0.436 -2.039 ML 154 152 6 157 4 1 1 96 217 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 91 212 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 91 212 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 112 233 -0.220 -5.699 -3.075 -8.184 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 85 ] 105 - a - - - ML 159 158 6 161 3 1 1 19 37 -7.883 -0.022 -6.537 0.956 -1.053 -0.380 -0.304 D 160 158 6 161 3 0 0 18 36 -6.927 -0.759 -1.319 IL 161 161 3 161 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 86 ] 106 - U - - - ML 162 161 3 164 3 1 1 17 36 -7.992 -0.020 -6.646 -1.032 -0.691 -1.768 1.377 D 163 161 3 164 3 0 0 17 36 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 87 ] 107 - a - - - ML 165 164 3 167 3 1 1 16 35 -7.992 -0.143 -3.468 0.633 -0.269 -1.000 0.163 D 166 164 3 167 3 0 0 16 34 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 88 ] 108 - u - - - ML 168 167 3 170 3 1 1 15 33 -7.871 -0.246 -2.711 0.360 -0.425 -0.715 0.446 D 169 167 3 170 3 0 0 14 33 -6.988 -2.501 -0.294 IL 170 170 3 170 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 89 ] 109 - a - - - ML 171 170 3 173 3 1 1 13 32 -7.650 -0.026 -6.305 0.700 -0.765 -0.887 0.318 D 172 170 3 173 3 0 0 12 31 -7.753 -3.266 -0.166 IL 173 173 3 173 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 90 ] 110 - g - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 0.154 -0.544 0.297 -0.041 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 91 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 [ BEGL 34 ] - - - - - - S 178 99 1 179 1 0 2 83 133 0.000 [ BIF 35 ] - - - - - - B 179 178 1 180 227 0 2 83 133 [ BEGL 36 ] - - - - - - S 180 179 1 181 4 0 0 56 105 -0.068 -6.849 -6.256 -5.377 [ MATP 37 ] 19 43 G C - - MP 181 180 1 185 6 2 2 56 105 -9.102 -9.041 -0.021 -7.818 -8.097 -8.492 -4.718 -3.083 -4.815 0.216 -5.200 -4.685 -0.570 -5.056 -4.312 3.633 -4.651 -0.781 -0.956 -4.452 -2.606 -3.692 ML 182 180 1 185 6 1 1 54 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 183 180 1 185 6 1 1 54 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 184 180 1 185 6 0 0 50 99 -9.315 -8.013 -3.810 -4.492 -4.510 -0.260 IL 185 185 5 185 6 1 1 55 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 186 186 6 186 5 1 1 55 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 20 42 u a - - MP 187 186 6 191 6 2 2 54 103 -9.102 -9.041 -0.021 -7.818 -8.097 -8.492 -1.326 -2.403 -2.599 0.969 -2.324 -3.426 1.656 -2.749 -2.641 1.549 -3.174 -0.568 2.168 -2.738 -0.204 -1.676 ML 188 186 6 191 6 1 1 52 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 189 186 6 191 6 1 1 52 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 190 186 6 191 6 0 0 48 97 -9.315 -8.013 -3.810 -4.492 -4.510 -0.260 IL 191 191 5 191 6 1 1 53 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 192 192 6 192 5 1 1 53 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 21 41 u a - - MP 193 192 6 197 6 2 2 52 102 -9.102 -9.041 -0.021 -7.818 -8.097 -8.492 -3.045 -2.937 -3.092 1.115 -2.454 -3.848 1.820 -3.010 -3.105 0.988 -3.595 -0.956 2.407 -3.266 0.276 -2.045 ML 194 192 6 197 6 1 1 50 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 195 192 6 197 6 1 1 49 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 196 192 6 197 6 0 0 45 95 -9.315 -8.013 -3.810 -4.492 -4.510 -0.260 IL 197 197 5 197 6 1 1 51 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 198 198 6 198 5 1 1 51 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 22 40 G C - - MP 199 198 6 203 6 2 2 50 100 -9.102 -4.920 -0.068 -7.818 -8.097 -8.492 -3.647 -2.516 -3.658 1.400 -4.226 -4.349 0.255 -4.019 -3.675 3.083 -4.091 0.609 -0.028 -3.680 -1.706 -2.578 ML 200 198 6 203 6 1 1 47 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 201 198 6 203 6 1 1 47 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 202 198 6 203 6 0 0 43 92 -9.315 -8.013 -3.810 -4.492 -4.510 -0.260 IL 203 203 5 203 6 1 1 49 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 204 204 6 204 5 1 1 49 98 -2.653 -0.407 -6.164 -4.332 -5.438 0.000 0.000 0.000 0.000 [ MATP 41 ] 23 38 c g - - MP 205 204 6 209 4 2 2 48 98 -1.857 -7.140 -0.524 -5.554 -2.497 -2.408 -1.786 1.228 -2.337 -3.439 2.015 -2.767 -2.669 1.618 -3.199 -0.553 1.664 -2.743 -0.189 -1.685 ML 206 204 6 209 4 1 1 44 93 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 207 204 6 209 4 1 1 42 91 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 208 204 6 209 4 0 0 41 90 -4.819 -4.500 -2.516 -0.424 IL 209 209 5 209 4 1 1 50 99 -0.538 -2.384 -3.133 -7.424 0.000 0.000 0.000 0.000 IR 210 210 6 210 3 1 1 22 41 -1.436 -0.742 -4.941 0.000 0.000 0.000 0.000 [ MATL 42 ] 31 - a - - - ML 211 210 6 213 3 1 1 17 36 -7.950 -0.021 -6.604 0.898 -0.735 -1.028 0.064 D 212 210 6 213 3 0 0 17 35 -6.518 -2.031 -0.426 IL 213 213 3 213 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - U - - - ML 214 213 3 216 3 1 1 16 35 -7.950 -0.147 -3.427 -1.460 -1.461 -2.192 1.611 D 215 213 3 216 3 0 0 15 34 -6.518 -2.031 -0.426 IL 216 216 3 216 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - u - - - ML 217 216 3 219 3 1 1 15 33 -7.826 -0.175 -3.185 0.041 -0.764 -0.037 0.493 D 218 216 3 219 3 0 0 14 32 -7.193 -2.706 -0.252 IL 219 219 3 219 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - a - - - ML 220 219 3 222 3 1 1 13 32 -7.676 -0.025 -6.330 0.534 -0.498 -0.283 0.031 D 221 219 3 222 3 0 0 12 31 -7.688 -3.201 -0.174 IL 222 222 3 222 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - a - - - ML 223 222 3 225 2 1 1 1 1 * 0.000 0.471 -0.207 -0.512 0.065 D 224 222 3 225 2 0 0 0 0 * 0.000 IL 225 225 3 225 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 47 ] - - - - - - E 226 225 3 -1 0 0 0 0 0 [ BEGR 48 ] - - - - - - S 227 179 1 228 3 0 0 43 62 -3.569 -0.143 -6.646 IL 228 228 2 228 3 1 1 44 63 -1.693 -0.637 -4.393 0.000 0.000 0.000 0.000 [ MATL 49 ] 45 - C - - - ML 229 228 2 231 5 1 1 42 61 -7.118 -0.038 -6.933 -7.145 -8.037 -1.107 1.376 -1.607 -0.707 D 230 228 2 231 5 0 0 41 60 -4.959 -0.803 -4.221 -2.596 -2.508 IL 231 231 3 231 5 1 1 42 61 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 46 72 c g - - MP 232 231 3 236 6 2 2 41 60 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.626 -3.365 -3.560 0.367 -2.674 -4.217 2.970 -3.303 -3.558 1.319 -3.979 -1.217 1.119 -3.790 -0.326 -2.425 ML 233 231 3 236 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 234 231 3 236 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 235 231 3 236 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 236 236 5 236 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 237 237 6 237 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 47 71 u a - - MP 238 237 6 242 6 2 2 39 58 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.299 -3.054 -3.316 1.142 -2.649 -4.088 1.668 -3.184 -3.305 0.913 -3.782 -0.929 2.654 -3.540 -0.344 -2.224 ML 239 237 6 242 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 240 237 6 242 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 241 237 6 242 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 242 242 5 242 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 243 243 6 243 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 48 70 u a - - MP 244 243 6 248 6 2 2 37 56 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.741 -3.665 -3.602 0.057 -2.538 -4.160 2.132 -3.251 -3.620 0.318 -4.000 -1.647 2.847 -3.875 -0.220 -2.491 ML 245 243 6 248 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 246 243 6 248 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 247 243 6 248 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 248 248 5 248 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 249 249 6 249 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 49 69 G C - - MP 250 249 6 254 6 2 2 35 54 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.800 -3.122 -4.905 0.161 -5.315 -4.717 -0.665 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.705 -3.781 ML 251 249 6 254 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 252 249 6 254 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 253 249 6 254 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 254 254 5 254 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 255 255 6 255 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 50 68 g c - - MP 256 255 6 260 6 2 2 33 52 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.652 -2.555 -3.671 1.900 -4.154 -4.428 0.310 -3.978 -3.663 2.991 -4.099 -0.179 0.003 -3.747 -1.658 -2.573 ML 257 255 6 260 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 258 255 6 260 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 259 255 6 260 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 260 260 5 260 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 261 261 6 261 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 51 67 u a - - MP 262 261 6 266 6 2 2 31 50 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.200 -2.954 -3.224 0.699 -2.597 -3.970 1.874 -3.136 -3.244 1.665 -3.718 -0.867 2.314 -3.385 -0.275 -2.143 ML 263 261 6 266 6 1 1 30 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 264 261 6 266 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 265 261 6 266 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 266 266 5 266 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 267 267 6 267 5 1 1 30 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 52 66 g c - - MP 268 267 6 272 4 2 2 29 48 -6.978 -7.185 -0.052 -5.599 -2.217 -2.064 -0.929 1.175 -2.376 -3.155 1.443 -2.684 -1.449 2.294 -2.976 -0.266 1.044 -2.443 -0.394 -1.516 ML 269 267 6 272 4 1 1 30 49 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 270 267 6 272 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 271 267 6 272 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 272 272 5 272 4 1 1 31 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 273 273 6 273 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 53 - C - - - ML 274 273 6 276 3 1 1 26 45 -7.992 -0.020 -6.646 -1.809 1.642 -2.635 -1.209 D 275 273 6 276 3 0 0 25 44 -6.174 -1.687 -0.566 IL 276 276 3 276 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 54 - U - - - ML 277 276 3 279 3 1 1 25 44 -7.992 -0.020 -6.646 -1.537 -1.525 -2.274 1.633 D 278 276 3 279 3 0 0 24 43 -6.174 -1.687 -0.566 IL 279 279 3 279 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 55 - U - - - ML 280 279 3 282 3 1 1 24 43 -7.992 -0.020 -6.646 -1.537 -1.525 -2.274 1.633 D 281 279 3 282 3 0 0 23 42 -6.174 -1.687 -0.566 IL 282 282 3 282 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 56 - A - - - ML 283 282 3 285 3 1 1 23 42 -7.992 -0.020 -6.646 1.091 -0.731 -0.749 -0.574 D 284 282 3 285 3 0 0 22 41 -6.174 -1.687 -0.566 IL 285 285 3 285 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 57 - g - - - ML 286 285 3 288 3 1 1 22 40 -2.117 -0.397 -6.646 -0.119 -0.352 0.404 -0.041 D 287 285 3 288 3 0 0 20 38 -6.174 -1.687 -0.566 IL 288 288 3 288 3 1 1 22 40 -2.061 -0.467 -4.761 0.000 0.000 0.000 0.000 [ MATL 62 ] 59 - U - - - ML 289 288 3 291 3 1 1 20 39 -7.992 -0.020 -6.646 -0.765 0.078 -1.525 1.006 D 290 288 3 291 3 0 0 19 38 -6.174 -1.687 -0.566 IL 291 291 3 291 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 60 - u - - - ML 292 291 3 294 3 1 1 19 37 -7.992 -0.020 -6.646 -0.729 0.499 -1.512 0.708 D 293 291 3 294 3 0 0 18 37 -6.174 -1.687 -0.566 IL 294 294 3 294 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 61 - c - - - ML 295 294 3 297 3 1 1 18 36 -7.992 -0.020 -6.646 -0.331 0.546 -1.289 0.418 D 296 294 3 297 3 0 0 17 36 -6.174 -1.687 -0.566 IL 297 297 3 297 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 62 - C - - - ML 298 297 3 300 3 1 1 16 35 -7.992 -0.020 -6.646 -1.809 1.642 -2.635 -1.209 D 299 297 3 300 3 0 0 16 34 -6.174 -1.687 -0.566 IL 300 300 3 300 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 63 - U - - - ML 301 300 3 303 3 1 1 15 33 -7.992 -0.020 -6.646 -1.537 -1.525 -2.274 1.633 D 302 300 3 303 3 0 0 15 33 -6.174 -1.687 -0.566 IL 303 303 3 303 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 64 - U - - - ML 304 303 3 306 3 1 1 13 31 -7.992 -0.020 -6.646 -1.537 -1.525 -2.274 1.633 D 305 303 3 306 3 0 0 13 32 -6.174 -1.687 -0.566 IL 306 306 3 306 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 65 - U - - - ML 307 306 3 309 2 1 1 1 1 * 0.000 -1.537 -1.525 -2.274 1.633 D 308 306 3 309 2 0 0 0 0 * 0.000 IL 309 309 3 309 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 310 309 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME preQ1-II ACC RF01054 DESC PreQ1-II (pre queuosine) riboswitch aptamer LENG 99 MAXL 275 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Aug 15 13:48:02 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3Dupdates/OK_update/RF01054/CM NSEQ 15 EFFN 3.167725 CKSUM 265732173 STATS LOCAL MSV -9.2735 0.71842 STATS LOCAL VITERBI -10.3272 0.71842 STATS LOCAL FORWARD -3.4050 0.71842 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.25296 1.52718 1.51627 1.28134 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 0.00000 * 1 1.69016 2.23413 2.57386 0.45858 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 2 1.21281 1.52511 1.20828 1.68021 2 g - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 3 1.54291 2.09707 2.06222 0.62315 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 4 2.03926 2.10302 0.44154 2.25627 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 5 1.50596 1.00258 1.71233 1.46612 5 c - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 6 1.54291 2.09707 2.06222 0.62315 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 7 0.11338 3.53038 3.22688 3.26460 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 8 1.12005 1.73729 2.19370 0.95131 8 u - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 9 0.28523 2.73434 2.68604 2.16217 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 10 1.38299 0.68982 2.53903 1.78045 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 11 1.98837 2.33732 2.75209 0.35282 11 U - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 12 0.87314 2.21392 1.31274 1.58960 12 a - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 13 0.91909 1.90546 1.48392 1.48891 13 a - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 14 0.96295 2.04991 1.80896 1.12189 14 a - - : 1.38629 1.38629 1.38629 1.38629 0.09592 2.59291 4.09482 0.39808 1.11354 1.09861 0.40547 15 0.45400 2.41360 2.44345 1.66831 16 A - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 16 0.46841 2.05533 2.13941 2.05393 17 A - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 17 1.37692 1.13401 1.66735 1.43903 18 c - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 18 2.78228 3.54080 0.12968 3.48231 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 19 1.80887 1.56142 1.47754 0.92099 20 u - - < 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 20 1.83867 1.50154 1.95766 0.74025 21 u - - < 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 21 1.68513 2.70326 0.40047 2.55639 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 22 1.65836 1.24190 1.45640 1.24605 23 c - - < 1.38629 1.38629 1.38629 1.38629 0.42426 1.11143 4.09482 1.44891 0.26765 1.09861 0.40547 23 0.68714 1.97589 2.24472 1.37677 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 24 2.88650 2.80427 3.41358 0.16163 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.14770 4.09482 2.11488 1.46634 0.26236 1.09861 0.40547 25 1.39039 2.01106 1.36943 1.01356 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.17940 3.98501 1.92664 1.46634 0.26236 2.22379 0.11451 26 0.98662 1.75190 1.57414 1.40026 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04353 3.84914 3.84914 1.46634 0.26236 0.79736 0.59878 27 1.03146 1.50869 1.76493 1.38184 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.23219 1.66917 3.97397 0.76337 0.62753 0.22739 1.59262 28 1.42323 1.59073 1.07235 1.54606 38 g - - > 1.38629 1.38629 1.38629 1.38629 0.13824 2.18520 4.09482 0.27379 1.42917 1.09861 0.40547 29 2.79415 0.55170 2.51294 1.26644 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 30 0.90749 2.12722 1.23356 1.68178 41 a - - > 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 31 0.98653 1.61345 1.38374 1.72996 42 a - - > 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 32 3.62930 0.15835 3.35927 2.46332 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.14770 2.11488 4.09482 0.25642 1.48640 1.09861 0.40547 33 2.61669 0.27200 2.81700 2.25076 45 C - - , 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 34 2.54067 0.56195 1.72956 1.75025 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 35 1.84302 1.67879 2.06806 0.63747 47 U - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 36 2.83973 1.29159 2.60659 0.52266 48 U - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 37 2.82244 3.60079 0.12306 3.53946 49 G - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 38 1.28693 2.72637 0.53877 2.59076 50 G - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 39 2.23670 1.43838 1.46030 0.85870 51 u - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 40 1.60411 1.68332 0.85020 1.68283 52 g - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 41 3.28165 0.13144 3.85040 2.74377 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 42 2.95417 2.86094 3.48321 0.15088 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 43 2.95417 2.86094 3.48321 0.15088 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 44 0.54043 1.94186 2.00136 1.97390 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 45 1.55820 1.62797 1.00158 1.48784 57 g - - _ 1.38629 1.38629 1.38629 1.38629 0.37808 1.20812 4.13110 0.10428 2.31237 1.09861 0.40547 46 2.16017 1.29275 2.70540 0.61003 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 47 2.12471 0.94376 2.69419 0.85856 60 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 48 1.72880 0.90085 2.47343 1.10266 61 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 49 3.28165 0.13144 3.85040 2.74377 62 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 50 2.95417 2.86094 3.48321 0.15088 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 51 2.95417 2.86094 3.48321 0.15088 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 52 2.95417 2.86094 3.48321 0.15088 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 53 1.80579 0.98261 1.38544 1.55539 66 c - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 54 0.96388 1.56645 1.29202 2.00182 67 a - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 55 2.82918 0.61065 2.53780 1.14288 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 56 3.72294 0.14740 3.44341 2.51416 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 57 0.59035 2.77267 1.17456 2.59806 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 58 0.71089 2.26735 1.51467 1.68563 71 a - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 59 2.00323 1.83444 0.50399 2.28981 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 60 2.24916 0.44481 2.15461 1.98329 73 C - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 61 0.39718 2.51114 2.52865 1.79068 74 A - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 62 2.95417 2.86094 3.48321 0.15088 75 U - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 63 0.10524 3.60058 3.29082 3.34207 76 A - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 64 2.33524 1.78847 2.85936 0.38759 77 U - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 65 2.95417 2.86094 3.48321 0.15088 78 U - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 66 0.27555 2.76920 2.72533 2.18380 79 A - - - 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 67 1.68094 0.85813 2.02451 1.35561 80 c - - - 1.38629 1.38629 1.38629 1.38629 0.14204 4.13110 2.15116 1.46634 0.26236 1.09861 0.40547 68 0.13102 3.39490 3.10396 3.11495 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.10318 4.02543 2.52352 1.46634 0.26236 2.22379 0.11451 69 1.43647 1.29987 1.36129 1.45528 82 c - - < 1.38629 1.38629 1.38629 1.38629 0.03883 3.96108 3.96108 1.46634 0.26236 0.56422 0.84119 70 1.47444 2.10665 0.74443 1.74616 83 g - - < 1.38629 1.38629 1.38629 1.38629 0.03463 4.07340 4.07340 1.46634 0.26236 0.36839 1.17715 71 1.98381 0.79046 1.56121 1.61477 84 c - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 72 2.80478 3.57688 0.12609 3.50703 85 G - - < 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 73 1.76193 1.40077 1.09084 1.40265 86 g - - < 1.38629 1.38629 1.38629 1.38629 0.37525 1.57958 2.23663 2.48376 0.08712 1.09861 0.40547 74 0.65559 2.24934 1.66821 1.67766 105 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03598 4.03597 4.03597 1.46634 0.26236 0.26298 1.46430 75 2.42769 1.99436 2.94711 0.32411 106 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 76 0.89572 1.56477 2.20173 1.30218 107 a - - _ 1.38629 1.38629 1.38629 1.38629 0.14204 4.13110 2.15116 1.46634 0.26236 1.09861 0.40547 77 1.11381 1.70676 1.92855 1.06455 108 u - - _ 1.38629 1.38629 1.38629 1.38629 0.24427 4.02543 1.61510 1.46634 0.26236 2.22379 0.11451 78 0.85009 2.00760 2.10792 1.14942 109 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04458 3.82574 3.82574 1.46634 0.26236 2.96424 0.05298 79 1.31839 1.79577 1.08584 1.47483 110 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04458 3.82574 3.82574 1.46634 0.26236 0.10892 2.27109 80 1.57717 1.19165 1.26868 1.56773 111 c - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 81 3.61278 0.15476 3.38968 2.49274 112 C - - > 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 82 1.83653 1.68870 0.71797 1.78303 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.09234 4.13110 2.62920 1.46634 0.26236 1.09861 0.40547 83 1.90073 0.84386 1.91773 1.29625 114 c - - > 1.38629 1.38629 1.38629 1.38629 0.03463 4.07340 4.07340 1.46634 0.26236 1.87030 0.16733 84 1.68007 1.22632 1.46252 1.24265 115 c - - > 1.38629 1.38629 1.38629 1.38629 0.03463 4.07340 4.07340 1.46634 0.26236 0.36839 1.17715 85 0.10524 3.60058 3.29082 3.34207 116 A - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 86 0.10524 3.60058 3.29082 3.34207 117 A - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 87 0.10524 3.60058 3.29082 3.34207 118 A - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 88 3.06190 3.98421 0.09870 3.55502 119 G - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 89 3.06190 3.98421 0.09870 3.55502 120 G - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 90 0.10524 3.60058 3.29082 3.34207 121 A - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 91 3.06190 3.98421 0.09870 3.55502 122 G - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 92 0.10524 3.60058 3.29082 3.34207 123 A - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13110 4.13110 1.46634 0.26236 1.09861 0.40547 93 0.23646 3.02503 2.32859 2.73967 124 A - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 94 0.83301 1.55630 2.20656 1.40950 125 a - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 95 0.76226 1.76672 2.21281 1.37395 126 a - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 96 1.15186 1.82055 1.62502 1.12359 127 u - - : 1.38629 1.38629 1.38629 1.38629 0.34425 1.29249 4.09482 0.41375 1.08224 1.09861 0.40547 97 0.40196 2.49124 2.50304 1.79366 130 A - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 98 2.88650 2.80427 3.41358 0.16163 131 U - - : 1.38629 1.38629 1.38629 1.38629 0.03389 4.09482 4.09482 1.46634 0.26236 1.09861 0.40547 99 2.99327 3.90791 0.10647 3.48039 132 G - - : 1.38629 1.38629 1.38629 1.38629 0.01709 4.07802 * 1.46634 0.26236 0.00000 * //