INFERNAL1/a [1.1.4 | Dec 2020] NAME c-di-GMP-I ACC RF01051 DESC Cyclic di-GMP-I riboswitch STATES 270 NODES 71 CLEN 87 W 223 ALPH RNA RF no CONS yes MAP yes DATE Wed Mar 5 13:53:42 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 155 EFFN 4.611969 CKSUM 4098006892 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.00 NC 34.90 EFP7GF -12.0814 0.71863 ECMLC 0.64277 -8.50254 0.62709 1600000 424377 0.002828 ECMGC 0.39858 -15.03098 -3.49721 1600000 39681 0.010080 ECMLI 0.54602 -7.72484 2.05993 1600000 250881 0.004783 ECMGI 0.43861 -10.23584 0.06897 1600000 36726 0.010891 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 223 392 -7.765 -7.972 -0.030 -6.386 IL 1 1 2 1 4 8 41 225 395 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 7 40 225 394 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 9 40 224 393 -8.736 -0.012 -7.390 0.134 0.047 -0.639 0.296 D 4 2 3 5 3 3 35 221 390 -6.174 -1.687 -0.566 IL 5 5 3 5 3 7 40 224 393 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 8 39 223 392 -8.736 -0.012 -7.390 0.527 -0.164 -0.896 0.175 D 7 5 3 8 3 3 34 220 389 -6.174 -1.687 -0.566 IL 8 8 3 8 3 6 39 223 392 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 8 38 222 391 -8.736 -0.012 -7.390 0.338 -0.149 -0.444 0.135 D 10 8 3 11 3 3 34 219 388 -6.174 -1.687 -0.566 IL 11 11 3 11 3 6 38 222 391 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 7 37 221 390 -8.736 -0.012 -7.390 0.070 0.062 -0.421 0.213 D 13 11 3 14 3 2 33 218 387 -6.174 -1.687 -0.566 IL 14 14 3 14 3 5 37 221 390 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 15 14 3 17 3 7 36 220 389 -8.736 -0.012 -7.390 -0.311 -0.436 0.583 -0.063 D 16 14 3 17 3 2 32 217 386 -6.174 -1.687 -0.566 IL 17 17 3 17 3 5 36 220 389 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 6 35 219 388 -8.736 -0.012 -7.390 0.731 -0.692 -0.605 0.089 D 19 17 3 20 3 2 31 216 385 -6.174 -1.687 -0.566 IL 20 20 3 20 3 5 35 219 388 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - a - - - ML 21 20 3 23 3 6 35 218 387 -8.736 -0.012 -7.390 0.554 -0.303 -0.770 0.182 D 22 20 3 23 3 1 31 215 384 -6.174 -1.687 -0.566 IL 23 23 3 23 3 4 34 218 387 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 6 34 217 386 -8.736 -0.012 -7.390 1.258 -0.713 -1.478 -0.644 D 25 23 3 26 3 1 30 214 383 -6.174 -1.687 -0.566 IL 26 26 3 26 3 4 33 217 386 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 5 33 216 385 -8.736 -0.012 -7.390 1.287 -1.147 -1.520 -0.397 D 28 26 3 29 3 1 29 213 382 -6.174 -1.687 -0.566 IL 29 29 3 29 3 4 33 216 385 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - a - - - ML 30 29 3 32 3 5 32 215 384 -8.736 -0.012 -7.390 0.688 -0.946 -0.053 -0.143 D 31 29 3 32 3 1 29 213 382 -6.174 -1.687 -0.566 IL 32 32 3 32 3 3 32 215 384 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 4 31 214 383 -9.087 -0.011 -7.405 -1.414 -3.378 1.761 -2.838 D 34 32 3 35 3 1 28 212 381 -5.620 -0.734 -1.403 IL 35 35 3 35 3 3 31 214 383 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 136 - a - - MR 36 35 3 38 3 4 30 213 382 -9.087 -0.011 -7.405 0.848 -0.987 -0.489 -0.025 D 37 35 3 38 3 0 27 210 379 -6.390 -1.568 -0.620 IR 38 38 3 38 3 2 30 213 382 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 135 - a - - MR 39 38 3 41 3 3 29 212 381 -9.087 -0.011 -7.405 0.707 -0.404 -0.598 -0.072 D 40 38 3 41 3 0 26 209 379 -6.390 -1.568 -0.620 IR 41 41 3 41 3 2 29 212 381 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 134 - g - - MR 42 41 3 44 3 3 28 211 380 -9.087 -0.011 -7.405 0.385 -1.454 0.796 -0.753 D 43 41 3 44 3 0 25 209 378 -6.390 -1.568 -0.620 IR 44 44 3 44 3 2 28 211 380 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 133 - C - - MR 45 44 3 47 3 3 27 210 379 -9.087 -0.011 -7.405 -1.054 1.339 -2.153 -0.388 D 46 44 3 47 3 0 25 208 377 -6.390 -1.568 -0.620 IR 47 47 3 47 3 2 27 210 379 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 132 - C - - MR 48 47 3 50 3 2 26 209 378 -9.087 -0.011 -7.405 -1.941 1.573 -2.639 -0.730 D 49 47 3 50 3 0 24 207 376 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 26 209 378 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 131 - G - - MR 51 50 3 53 2 1 25 208 377 -9.244 -0.002 0.207 -1.983 1.177 -1.591 D 52 50 3 53 2 0 24 207 376 -4.432 -0.068 IR 53 53 3 53 2 1 25 208 377 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 18 ] - - - - - - B 54 53 3 55 135 0 24 207 376 [ BEGL 19 ] - - - - - - S 55 54 1 56 4 0 0 43 65 -0.032 -7.303 -6.710 -7.351 [ MATP 20 ] 12 44 G C - - MP 56 55 1 60 6 2 2 43 65 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -5.131 -3.427 -5.124 -0.101 -5.576 -4.953 -0.007 -5.485 -4.783 3.663 -5.056 -1.143 -1.248 -4.690 -2.879 -4.040 ML 57 55 1 60 6 1 1 42 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 1 60 6 1 1 41 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 1 60 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 42 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 42 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 13 43 C G - - MP 62 61 6 66 4 2 2 41 63 -7.765 -7.972 -0.030 -6.386 -5.338 -5.397 -4.881 -1.515 -3.394 -5.178 3.662 -4.266 -4.943 -1.374 -5.147 -3.421 0.445 -5.310 -0.455 -3.742 ML 63 61 6 66 4 1 1 41 63 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 4 1 1 40 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 65 61 6 66 4 0 0 39 62 -4.568 -4.250 -2.265 -0.520 IL 66 66 5 66 4 1 1 42 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 67 67 6 67 3 1 1 41 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 14 - A - - - ML 68 67 6 70 3 1 1 39 61 -8.736 -0.012 -7.390 1.790 -2.704 -2.398 -2.340 D 69 67 6 70 3 0 0 37 60 -6.174 -1.687 -0.566 IL 70 70 3 70 3 1 1 40 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 15 - A - - - ML 71 70 3 73 3 1 1 38 60 -8.736 -0.012 -7.390 1.633 -1.403 -2.183 -1.740 D 72 70 3 73 3 0 0 36 59 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 1 39 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 16 - A - - - ML 74 73 3 76 3 1 1 36 59 -9.087 -0.011 -7.405 1.602 -1.799 -1.770 -1.383 D 75 73 3 76 3 0 0 35 58 -5.620 -0.734 -1.403 IL 76 76 3 76 3 1 1 37 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 42 - C - - MR 77 76 3 79 3 1 1 35 58 -9.087 -0.011 -7.405 -3.236 1.851 -4.013 -2.162 D 78 76 3 79 3 0 0 34 57 -6.390 -1.568 -0.620 IR 79 79 3 79 3 1 1 36 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 41 - A - - MR 80 79 3 82 3 1 1 34 57 -9.087 -0.011 -7.405 1.287 -1.250 -0.847 -0.776 D 81 79 3 82 3 0 0 33 56 -6.390 -1.568 -0.620 IR 82 82 3 82 3 1 1 35 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 40 - G - - MR 83 82 3 85 5 1 1 33 56 -7.787 -0.024 -7.602 -7.815 -8.706 -1.146 -2.045 1.588 -1.736 D 84 82 3 85 5 0 0 32 55 -5.352 -0.707 -2.978 -4.409 -2.404 IR 85 85 3 85 5 1 1 34 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 39 c g - - MP 86 85 3 90 6 2 2 32 55 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -3.142 -2.682 -3.248 0.943 -2.649 -3.449 2.765 -3.181 -3.228 0.786 -3.764 -0.924 1.543 -3.402 -0.178 -2.174 ML 87 85 3 90 6 1 1 31 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 3 90 6 1 1 31 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 3 90 6 0 0 28 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 32 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 32 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 38 c g - - MP 92 91 6 96 6 2 2 30 53 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -3.780 -3.691 -3.787 0.256 -2.871 -4.529 2.895 -3.509 -2.791 0.329 -4.228 -1.577 1.960 -3.989 -0.045 -2.611 ML 93 91 6 96 6 1 1 29 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 1 29 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 26 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 30 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 30 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 37 c g - - MP 98 97 6 102 6 2 2 28 51 -9.476 -9.415 -0.021 -8.191 -8.471 -7.567 -2.305 -2.404 -2.471 1.621 -2.079 -3.315 1.892 -1.881 -2.513 1.124 -2.930 -0.288 1.734 -2.611 -0.135 -1.618 ML 99 97 6 102 6 1 1 27 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 6 1 1 27 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 101 97 6 102 6 0 0 24 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 1 28 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 28 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 20 36 g c - - MP 104 103 6 108 6 2 2 26 49 -6.943 -9.410 -0.026 -8.187 -8.467 -8.862 -2.947 -2.635 -3.032 1.718 -2.875 -3.822 1.527 -3.239 -3.127 2.068 -3.625 -0.251 1.328 -3.113 0.016 -2.076 ML 105 103 6 108 6 1 1 25 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 6 1 1 25 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 6 108 6 0 0 22 45 -9.144 -7.843 -3.640 -4.322 -4.339 -0.296 IL 108 108 5 108 6 1 1 26 49 -2.697 -2.960 -0.684 -4.615 -5.391 -5.051 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 26 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 22 35 c g - - MP 110 109 6 114 6 2 2 24 47 -6.977 -9.410 -0.026 -8.187 -8.467 -8.862 -2.587 -2.664 -2.738 0.831 -1.412 -3.586 1.912 -2.594 -2.756 1.251 -3.312 -0.745 1.880 -2.887 1.023 -1.813 ML 111 109 6 114 6 1 1 23 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 23 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 6 114 6 0 0 21 44 -9.144 -7.843 -3.640 -4.322 -4.339 -0.296 IL 114 114 5 114 6 1 1 24 47 -2.694 -2.957 -0.686 -4.612 -5.388 -5.048 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 24 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 34 c g - - MP 116 115 6 120 4 2 2 22 45 -5.864 -6.387 -0.072 -5.653 -3.276 -3.165 -3.367 0.860 -2.715 -4.201 2.521 -3.258 -3.339 1.302 -3.869 -0.784 1.623 -3.518 0.301 -2.250 ML 117 115 6 120 4 1 1 22 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 4 1 1 22 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 119 115 6 120 4 0 0 20 43 -4.658 -4.339 -2.355 -0.483 IL 120 120 5 120 4 1 1 23 46 -1.818 -1.920 -1.249 -4.987 0.000 0.000 0.000 0.000 IR 121 121 6 121 3 1 1 22 45 -1.549 -0.723 -4.249 0.000 0.000 0.000 0.000 [ MATL 34 ] 26 - G - - - ML 122 121 6 124 3 1 1 20 43 -8.717 -0.022 -6.290 -1.987 -3.029 1.782 -2.425 D 123 121 6 124 3 0 0 18 41 -6.448 -1.496 -0.657 IL 124 124 3 124 3 1 1 22 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - A - - - ML 125 124 3 127 3 1 1 19 42 -8.718 -0.012 -7.372 1.215 -0.988 -1.480 -0.293 D 126 124 3 127 3 0 0 17 40 -6.432 -1.945 -0.457 IL 127 127 3 127 3 1 1 21 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - A - - - ML 128 127 3 130 3 1 1 18 41 -4.961 -0.056 -7.372 1.607 -2.532 -0.850 -2.140 D 129 127 3 130 3 0 0 16 39 -6.432 -1.945 -0.457 IL 130 130 3 130 3 1 1 21 44 -1.167 -0.964 -4.574 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - A - - - ML 131 130 3 133 2 1 1 1 1 * 0.000 1.906 -3.853 -3.355 -3.541 D 132 130 3 133 2 0 0 0 0 * 0.000 IL 133 133 3 133 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 134 133 3 -1 0 0 0 0 0 [ BEGR 39 ] - - - - - - S 135 54 1 136 3 0 3 181 350 -8.736 -0.012 -7.390 IL 136 136 2 136 3 1 2 182 352 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - A - - - ML 137 136 2 139 3 1 4 181 350 -8.736 -0.012 -7.390 1.908 -3.886 -3.386 -3.576 D 138 136 2 139 3 0 0 178 348 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 2 181 351 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - A - - - ML 140 139 3 142 5 1 3 180 349 -7.787 -0.024 -7.602 -7.815 -8.706 1.908 -3.886 -3.386 -3.576 D 141 139 3 142 5 0 0 178 347 -4.959 -0.803 -4.221 -2.596 -2.508 IL 142 142 3 142 5 1 1 180 349 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 47 130 A U - - MP 143 142 3 147 6 2 4 179 348 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -4.568 -0.341 -4.605 3.631 -5.828 -6.649 -1.563 -4.701 -4.436 0.229 -5.048 -0.796 -1.729 -5.493 -3.411 -3.397 ML 144 142 3 147 6 1 1 177 346 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 145 142 3 147 6 1 1 176 345 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 146 142 3 147 6 0 0 172 341 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 147 147 5 147 6 1 1 178 347 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 148 148 6 148 5 1 1 178 347 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 48 129 g c - - MP 149 148 6 153 6 2 4 177 346 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -3.369 -2.116 -3.536 1.520 -4.048 -4.127 0.074 -3.841 -0.303 2.374 -3.794 1.990 -0.187 -3.562 -1.742 -2.481 ML 150 148 6 153 6 1 1 175 344 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 151 148 6 153 6 1 1 175 344 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 152 148 6 153 6 0 0 171 340 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 153 153 5 153 6 1 1 176 345 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 154 154 6 154 5 1 1 176 345 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 49 128 C G - - MP 155 154 6 159 6 2 3 175 344 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -5.238 -5.276 -4.795 -1.392 -3.316 -5.105 3.613 -4.173 -4.844 -1.253 -5.066 -3.276 0.933 -5.217 -0.992 -3.644 ML 156 154 6 159 6 1 1 173 342 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 157 154 6 159 6 1 1 173 342 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 158 154 6 159 6 0 0 170 339 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 159 159 5 159 6 1 1 174 343 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 160 160 6 160 5 1 1 174 343 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 50 127 c g - - MP 161 160 6 165 4 2 2 173 342 -7.765 -4.851 -0.076 -6.386 -2.403 -2.482 -2.542 0.672 -1.032 -3.615 2.426 -2.867 -2.783 0.746 -3.338 -0.976 1.698 -2.920 0.764 -1.838 ML 162 160 6 165 4 1 1 172 341 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 163 160 6 165 4 1 1 171 340 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 164 160 6 165 4 0 0 170 339 -4.568 -4.250 -2.265 -0.520 IL 165 165 5 165 4 1 1 173 342 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 166 166 6 166 3 1 1 172 342 -1.601 -0.691 -4.301 0.000 0.000 0.000 0.000 [ MATL 46 ] 51 - a - - - ML 167 166 6 169 5 1 1 171 340 -5.307 -0.239 -3.094 -6.998 -8.706 0.829 -1.203 -0.779 0.270 D 168 166 6 169 5 0 0 169 338 -4.959 -0.803 -4.221 -2.596 -2.508 IL 169 169 3 169 5 1 1 171 340 -2.249 -0.514 -4.285 -6.117 -5.391 0.000 0.000 0.000 0.000 [ MATP 47 ] 54 125 c g - - MP 170 169 3 174 6 2 2 170 339 -9.374 -9.313 -0.018 -8.090 -8.370 -8.765 -2.737 -2.951 -2.258 0.812 -2.211 -3.912 2.756 -3.053 -3.070 0.927 -3.609 -1.033 1.489 -3.234 -0.231 -2.045 ML 171 169 3 174 6 1 1 169 338 -0.979 -7.689 -2.190 -2.098 -7.539 -5.069 -0.001 0.092 -0.872 0.473 MR 172 169 3 174 6 1 1 168 337 -7.030 -5.759 -1.541 -5.737 -0.871 -3.951 0.506 -0.481 -0.199 -0.012 D 173 169 3 174 6 0 0 164 333 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 169 338 -3.419 -3.682 -0.375 -5.337 -6.113 -5.773 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 169 338 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 56 124 g c - - MP 176 175 6 180 6 2 2 168 337 -9.476 -9.415 -0.025 -8.191 -6.811 -8.866 -3.616 -3.025 -3.602 0.869 -2.886 -4.333 2.140 -3.658 -3.705 2.524 -4.144 -0.799 0.948 -3.664 -0.812 -2.498 ML 177 175 6 180 6 1 1 166 335 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 166 335 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 163 332 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 167 336 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 167 336 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 57 123 G C - - MP 182 181 6 186 4 2 2 166 335 -7.614 -8.859 -0.048 -5.312 -4.390 -2.962 -4.319 0.812 -5.203 -4.679 -0.418 -4.860 -2.757 3.485 -4.694 -0.492 -0.454 -4.116 -2.428 -3.260 ML 183 181 6 186 4 1 1 165 334 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 184 181 6 186 4 1 1 165 334 -4.368 -12.795 -0.317 -2.751 0.443 -0.456 -0.310 0.144 D 185 181 6 186 4 0 0 162 332 -12.737 -14.007 -2.036 -0.404 IL 186 186 5 186 4 1 1 165 334 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 187 187 6 187 3 1 1 165 335 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 122 - G - - MR 188 187 6 190 3 1 1 164 333 -9.087 -0.011 -7.405 -3.066 -4.461 1.912 -3.807 D 189 187 6 190 3 0 0 162 331 -6.390 -1.568 -0.620 IR 190 190 3 190 3 1 1 164 334 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 121 - A - - MR 191 190 3 193 5 1 1 163 332 -7.787 -0.024 -7.602 -7.815 -8.706 1.346 -1.258 -1.013 -0.877 D 192 190 3 193 5 0 0 161 330 -5.352 -0.707 -2.978 -4.409 -2.404 IR 193 193 3 193 5 1 1 163 332 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 58 120 g c - - MP 194 193 3 198 6 2 2 162 331 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -2.062 -1.450 -2.847 1.246 -3.050 -3.099 0.731 -2.389 -1.287 2.255 -2.852 1.669 0.439 -2.735 -0.966 -1.851 ML 195 193 3 198 6 1 1 160 329 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 3 198 6 1 1 159 329 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 3 198 6 0 0 156 325 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 161 330 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 161 330 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 59 119 u a - - MP 200 199 6 204 6 2 2 160 329 -9.476 -9.415 -0.016 -8.191 -8.471 -8.866 -2.917 -2.485 -3.038 0.854 -2.586 -3.325 1.985 -3.075 -3.049 1.304 -3.588 -0.978 2.348 -3.180 -0.339 -2.037 ML 201 199 6 204 6 1 1 159 328 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 6 1 1 158 327 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 203 199 6 204 6 0 0 155 324 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 204 204 5 204 6 1 1 159 329 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 205 205 6 205 5 1 1 159 328 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 60 118 C G - - MP 206 205 6 210 4 2 2 158 327 -7.765 -7.972 -0.241 -2.782 -5.542 -5.619 -5.042 -1.749 -3.529 -5.306 3.724 -4.426 -5.124 -1.618 -5.289 -3.671 0.062 -5.499 -0.578 -3.924 ML 207 205 6 210 4 1 1 157 327 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 208 205 6 210 4 1 1 156 325 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 209 205 6 210 4 0 0 154 323 -4.568 -4.250 -2.265 -0.520 IL 210 210 5 210 4 1 1 158 328 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 211 211 6 211 3 1 1 158 327 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 61 - U - - - ML 212 211 6 214 3 1 1 157 326 -8.539 -0.014 -7.193 -1.428 -1.176 -2.147 1.566 D 213 211 6 214 3 0 0 152 321 -7.768 -3.281 -0.164 IL 214 214 3 214 3 1 1 157 326 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 62 - A - - - ML 215 214 3 217 3 1 1 156 325 -6.132 -0.031 -7.193 1.175 -1.220 -0.564 -0.650 D 216 214 3 217 3 0 0 152 321 -7.768 -2.915 -0.213 IL 217 217 3 217 3 1 1 156 325 -1.498 -0.757 -4.198 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - A - - - ML 218 217 3 220 3 1 1 155 324 -8.548 -0.035 -5.559 1.230 -0.722 -1.513 -0.519 D 219 217 3 220 3 0 0 151 320 -7.725 -3.238 -0.169 IL 220 220 3 220 3 1 1 155 324 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 65 - g - - - ML 221 220 3 223 3 1 1 154 323 -8.887 -0.028 -5.850 0.259 -0.935 0.683 -0.569 D 222 220 3 223 3 0 0 151 320 -6.819 -1.779 -0.515 IL 223 223 3 223 3 1 1 154 323 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 117 - u - - MR 224 223 3 226 3 1 1 153 322 -8.883 -0.013 -7.200 0.001 -0.648 -0.652 0.786 D 225 223 3 226 3 0 0 149 318 -7.889 -2.825 -0.227 IR 226 226 3 226 3 1 1 153 322 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 60 ] - 116 - A - - MR 227 226 3 229 3 1 1 152 321 -8.890 -0.052 -4.903 1.453 -1.579 -1.345 -0.907 D 228 226 3 229 3 0 0 149 318 -7.857 -2.843 -0.224 IR 229 229 3 229 3 1 1 152 321 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 61 ] - 115 - u - - MR 230 229 3 232 5 1 1 151 320 -7.567 -0.028 -7.383 -7.595 -8.487 -0.395 -0.302 -0.956 0.936 D 231 229 3 232 5 0 0 148 317 -6.452 -0.485 -4.078 -5.509 -2.375 IR 232 232 3 232 5 1 1 151 320 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 66 114 g c - - MP 233 232 3 237 6 2 2 150 319 -9.452 -9.391 -0.017 -8.168 -8.447 -8.842 -2.499 -2.057 -2.939 1.221 -3.065 -3.699 1.486 -3.302 -2.665 2.603 -3.569 -0.193 0.897 -2.982 -0.899 -1.701 ML 234 232 3 237 6 1 1 147 316 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 235 232 3 237 6 1 1 146 315 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 236 232 3 237 6 0 0 138 307 -9.490 -8.188 -3.360 -4.667 -4.685 -0.287 IL 237 237 5 237 6 1 1 149 318 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 238 238 6 238 5 1 1 149 318 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 67 113 c g - - MP 239 238 6 243 6 2 2 148 317 -9.455 -7.423 -0.040 -8.171 -8.451 -6.170 -2.485 -2.502 -2.635 0.958 -2.392 -3.469 1.975 -1.654 -2.384 1.751 -3.225 -0.356 1.678 -2.767 -0.119 -1.745 ML 240 238 6 243 6 1 1 144 313 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 241 238 6 243 6 1 1 143 312 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 242 238 6 243 6 0 0 134 303 -9.440 -8.138 -3.935 -4.617 -4.634 -0.237 IL 243 243 5 243 6 1 1 147 316 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 244 244 6 244 5 1 1 147 316 -2.455 -0.477 -5.966 -4.134 -5.240 0.000 0.000 0.000 0.000 [ MATP 64 ] 68 111 c g - - MP 245 244 6 249 6 2 2 146 315 -9.438 -9.377 -0.093 -8.154 -8.434 -4.234 -1.452 -1.704 -1.499 1.414 -1.673 -2.700 1.577 -2.197 -0.979 1.278 -2.489 -0.348 1.552 -1.461 -0.021 -1.116 ML 246 244 6 249 6 1 1 141 310 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 247 244 6 249 6 1 1 139 309 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 248 244 6 249 6 0 0 130 299 -9.694 -8.392 -4.189 -4.871 -4.888 -0.196 IL 249 249 5 249 6 1 1 145 314 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 250 250 6 250 5 1 1 145 314 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 69 110 c g - - MP 251 250 6 255 4 2 2 145 314 -1.417 -3.283 -0.975 -6.161 -1.509 -1.099 -1.671 1.479 -1.794 -1.852 1.584 -1.853 -1.663 1.129 -2.436 -0.259 1.432 -1.941 0.212 -0.733 ML 252 250 6 255 4 1 1 133 303 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 253 250 6 255 4 1 1 132 301 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 254 250 6 255 4 0 0 127 296 -5.913 -4.329 -0.949 -1.266 IL 255 255 5 255 4 1 1 148 318 -1.910 -1.284 -1.666 -6.944 0.000 0.000 0.000 0.000 IR 256 256 6 256 3 1 1 152 322 -0.157 -3.325 -8.220 0.000 0.000 0.000 0.000 [ MATL 66 ] 73 - g - - - ML 257 256 6 259 3 1 1 16 34 -8.689 -0.017 -6.777 0.163 -0.804 0.293 0.114 D 258 256 6 259 3 0 0 15 34 -6.769 -1.418 -0.697 IL 259 259 3 259 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 74 - a - - - ML 260 259 3 262 3 1 1 14 33 -8.708 -0.025 -6.106 0.433 -0.450 -0.510 0.282 D 261 259 3 262 3 0 0 14 33 -6.554 -1.871 -0.482 IL 262 262 3 262 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 75 - a - - - ML 263 262 3 265 3 1 1 13 31 -8.700 -0.090 -4.112 0.544 -0.542 -0.419 0.146 D 264 262 3 265 3 0 0 13 31 -6.646 -1.579 -0.610 IL 265 265 3 265 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 76 - a - - - ML 266 265 3 268 2 1 1 1 1 * 0.000 0.601 -0.757 -0.096 -0.065 D 267 265 3 268 2 0 0 0 0 * 0.000 IL 268 268 3 268 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 269 268 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME c-di-GMP-I ACC RF01051 DESC Cyclic di-GMP-I riboswitch LENG 87 MAXL 300 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Mar 5 13:53:42 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 155 EFFN 13.760223 CKSUM 4098006892 STATS LOCAL MSV -8.9915 0.71863 STATS LOCAL VITERBI -9.6847 0.71863 STATS LOCAL FORWARD -3.6804 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.20612 1.47021 1.27502 1.65370 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 0.00000 * 1 1.32785 1.26173 1.88913 1.20203 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 2 0.94588 1.45691 2.20711 1.31420 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 3 1.12892 1.42850 1.70453 1.36613 3 a - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 4 1.40601 1.23629 1.66508 1.29009 4 c - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 5 1.90005 1.67827 0.79185 1.55716 5 g - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 6 0.77500 2.00862 1.88227 1.37485 6 a - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 7 0.92401 1.59306 2.06062 1.30049 7 a - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 8 0.35293 1.94658 3.04113 2.23649 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 9 0.33143 2.52845 3.11757 1.84479 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 10 0.81363 2.29430 1.35568 1.61873 10 a - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 11 2.63496 4.81939 0.09627 4.42421 11 G - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 12 3.84601 2.88109 0.09198 4.56262 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 13 4.65862 0.12106 4.55760 2.36395 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 14 0.07891 3.80733 3.68428 3.55588 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 15 0.15213 2.44071 3.84539 3.42194 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 16 0.16343 3.05100 3.16220 2.79478 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 17 2.10218 0.55437 2.36333 1.56412 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 18 3.01662 0.54978 2.82309 1.15666 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 19 1.33224 1.33133 1.70447 1.23746 19 u - - < 1.38629 1.38629 1.38629 1.38629 0.01970 5.07209 4.32451 1.46634 0.26236 1.09861 0.40547 20 1.30565 1.80037 1.10299 1.46150 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.02803 3.84797 5.06510 0.51385 0.91178 1.41388 0.27865 21 2.29570 1.35839 1.66570 0.79147 22 u - - < 1.38629 1.38629 1.38629 1.38629 0.02759 3.86780 5.06510 0.52296 0.89836 1.41388 0.27865 22 2.25327 0.81642 1.70712 1.30363 24 c - - < 1.38629 1.38629 1.38629 1.38629 0.03698 3.86920 4.17161 0.52361 0.89742 1.41388 0.27865 23 3.40794 3.96727 0.08626 3.48641 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02114 5.05594 4.23037 1.46634 0.26236 0.82130 0.57956 24 0.37700 2.34275 3.09340 1.75636 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01281 5.05696 5.05696 1.46634 0.26236 1.68549 0.20500 25 0.18197 4.27401 1.98849 4.16418 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05005 3.15929 5.05696 1.14026 0.38527 1.68549 0.20500 26 0.01674 5.42719 5.02099 5.18425 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03739 3.49539 5.05696 0.37710 1.15787 0.85991 0.55026 27 1.66406 1.87279 0.65190 1.99596 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.01271 5.06510 5.06510 1.46634 0.26236 1.41388 0.27865 28 1.21041 1.80669 0.90115 2.02779 35 g - - > 1.38629 1.38629 1.38629 1.38629 0.01271 5.06510 5.06510 1.46634 0.26236 1.41388 0.27865 29 1.81379 1.24580 1.46524 1.14498 36 u - - > 1.38629 1.38629 1.38629 1.38629 0.01271 5.06510 5.06510 1.46634 0.26236 0.66630 0.72073 30 1.37587 2.01218 1.24854 1.11853 37 u - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 31 1.29623 3.13679 0.47314 2.81389 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 32 1.77601 2.50989 0.49867 1.95143 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 33 2.56117 3.04079 0.18913 3.05109 40 G - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 34 0.33790 2.59847 2.13861 2.35884 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 35 4.79901 0.04036 5.14000 3.67054 42 C - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 36 2.82415 4.67484 0.08446 4.39757 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 37 4.67617 0.10226 2.84787 3.50911 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 38 0.01640 5.44840 5.04111 5.20326 45 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 39 0.01640 5.44840 5.04111 5.20326 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 40 0.06573 4.96168 3.07079 4.58234 47 A - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 41 1.66902 4.02012 0.25993 3.79384 48 G - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 42 4.63656 0.14159 4.53498 2.19277 49 C - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 43 2.46391 0.76647 2.34959 1.03609 50 c - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 44 0.67874 2.80587 2.09553 1.17349 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.04523 3.39583 4.53652 0.64105 0.74811 1.09861 0.40547 45 2.04708 0.62031 2.18350 1.51202 54 C - - < 1.38629 1.38629 1.38629 1.38629 0.16479 1.92665 5.06764 0.08434 2.51474 0.77504 0.61746 46 2.31675 1.10746 0.78345 2.16998 56 g - - < 1.38629 1.38629 1.38629 1.38629 0.02643 5.07209 3.92119 1.46634 0.26236 1.09861 0.40547 47 2.42261 3.68836 0.16887 3.17782 57 G - - < 1.38629 1.38629 1.38629 1.38629 0.01279 5.05845 5.05845 1.46634 0.26236 0.49024 0.94799 48 1.78280 2.75906 0.34152 2.85093 58 G - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 49 2.24956 1.36052 1.81565 0.74382 59 u - - < 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 50 4.71830 0.09583 4.63974 2.62021 60 C - - < 1.38629 1.38629 1.38629 1.38629 0.18308 5.07209 1.82619 1.46634 0.26236 1.09861 0.40547 51 3.16664 2.59330 3.63173 0.15477 61 U - - - 1.38629 1.38629 1.38629 1.38629 0.01495 4.90396 4.90396 1.46634 0.26236 3.32089 0.03679 52 0.40392 2.62766 1.86760 2.24847 62 A - - - 1.38629 1.38629 1.38629 1.38629 0.02972 3.82289 4.90396 0.57941 0.82151 2.58058 0.07875 53 0.35289 1.98803 3.24609 2.10824 64 A - - - 1.38629 1.38629 1.38629 1.38629 0.03324 4.91206 3.67560 1.46634 0.26236 3.28047 0.03834 54 1.24175 2.22614 0.70086 2.23475 65 g - - - 1.38629 1.38629 1.38629 1.38629 0.02524 4.89392 4.04951 1.46634 0.26236 0.25265 1.49941 55 1.83654 1.65876 0.66240 2.00511 66 G - - < 1.38629 1.38629 1.38629 1.38629 0.01310 5.03500 5.03500 1.46634 0.26236 1.61318 0.22221 56 2.12630 1.20640 1.20246 1.26942 67 g - - < 1.38629 1.38629 1.38629 1.38629 0.04030 5.03990 3.41042 1.46634 0.26236 2.08607 0.13259 57 1.42982 1.53547 1.36534 1.23787 68 u - - < 1.38629 1.38629 1.38629 1.38629 0.13984 5.01299 2.08870 1.46634 0.26236 2.49769 0.08586 58 1.30805 1.43115 1.59042 1.24904 69 u - - < 1.38629 1.38629 1.38629 1.38629 0.60697 0.80416 4.88833 0.31324 1.31331 0.32392 1.28485 59 1.31059 2.13692 1.04782 1.34087 73 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01679 5.03219 4.59236 1.46634 0.26236 0.80969 0.58878 60 1.03488 1.75478 1.77799 1.19466 74 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02336 5.04875 4.09374 1.46634 0.26236 1.46022 0.26421 61 0.93520 1.84117 1.69046 1.33019 75 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07888 5.04200 2.66809 1.46634 0.26236 0.98741 0.46607 62 0.88754 2.06642 1.39196 1.54596 76 a - - _ 1.38629 1.38629 1.38629 1.38629 0.78046 1.00448 1.73972 2.67512 0.07139 0.19002 1.75413 63 1.54387 1.60257 1.26306 1.19640 110 u - - > 1.38629 1.38629 1.38629 1.38629 0.02480 4.89795 4.07238 1.46634 0.26236 0.42534 1.06001 64 1.28711 1.56540 1.34048 1.37354 111 a - - > 1.38629 1.38629 1.38629 1.38629 0.02369 4.08891 5.01299 0.66454 0.72260 0.86821 0.54421 65 1.42712 1.36894 1.13805 1.68641 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.01800 5.03990 4.47739 1.46634 0.26236 2.08607 0.13259 66 2.14536 0.73716 1.57693 1.62003 114 c - - > 1.38629 1.38629 1.38629 1.38629 0.18373 5.03500 1.82430 1.46634 0.26236 2.17569 0.12051 67 1.90644 1.61957 2.18456 0.61456 115 U - - - 1.38629 1.38629 1.38629 1.38629 0.02099 4.86679 4.33755 1.46634 0.26236 1.74838 0.19123 68 0.22763 3.03603 2.76317 2.38093 116 A - - - 1.38629 1.38629 1.38629 1.38629 0.02187 4.89695 4.25740 1.46634 0.26236 3.35436 0.03556 69 1.44070 2.02275 1.88037 0.73728 117 u - - - 1.38629 1.38629 1.38629 1.38629 0.01515 4.89023 4.89023 1.46634 0.26236 0.07015 2.69202 70 3.23609 4.78236 0.06058 4.50151 118 G - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 71 0.80804 1.85180 1.27530 2.13733 119 a - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 72 2.43385 1.00278 2.74777 0.73112 120 u - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 73 0.29903 2.57360 2.32012 2.47765 121 A - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 74 4.65938 5.77356 0.01844 5.16934 122 G - - - 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 75 3.02006 0.21380 3.50713 2.17411 123 C - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 76 2.34290 0.81415 1.06215 2.16087 124 c - - > 1.38629 1.38629 1.38629 1.38629 0.17389 5.07209 1.87508 1.46634 0.26236 1.09861 0.40547 77 1.76471 2.31098 0.49414 2.12443 125 G - - > 1.38629 1.38629 1.38629 1.38629 0.05803 3.01534 4.91301 0.27685 1.41953 0.07860 2.58246 78 1.35275 2.48105 0.57204 2.37041 127 G - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 79 2.29905 4.67360 0.13015 4.39433 128 G - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 80 2.26664 1.19921 3.81135 0.55724 129 U - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 81 4.75068 2.32779 4.70840 0.12237 130 U - - > 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 82 1.25052 3.37807 0.43407 3.45253 131 G - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 83 3.72204 0.16835 3.86892 2.20841 132 C - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 84 2.48653 0.30379 3.53126 1.90035 133 C - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 85 1.11176 2.92831 0.64823 2.35846 134 G - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 86 0.79753 1.66830 1.87147 1.57459 135 a - - : 1.38629 1.38629 1.38629 1.38629 0.01262 5.07209 5.07209 1.46634 0.26236 1.09861 0.40547 87 0.67807 2.37412 1.76701 1.47636 136 A - - : 1.38629 1.38629 1.38629 1.38629 0.00633 5.06580 * 1.46634 0.26236 0.00000 * //