INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-M7 ACC RF01009 DESC microRNA mir-M7 STATES 205 NODES 49 CLEN 67 W 83 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 01:14:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01009/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.785156 CKSUM 2010958657 NULL 0.000 0.000 0.000 0.000 GA 91.00 TC 91.10 NC 43.60 EFP7GF -5.3814 0.72911 ECMLC 0.66835 -4.43365 3.56901 1600000 252376 0.004755 ECMGC 0.45844 -14.45254 -2.22425 1600000 108812 0.003676 ECMLI 0.66240 -3.12041 4.49391 1600000 186057 0.006450 ECMGI 0.48693 -10.21365 0.73283 1600000 82592 0.004843 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 83 102 -6.888 -7.095 -0.055 -5.509 IL 1 1 2 1 4 1 14 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 14 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 14 83 102 -7.908 -0.021 -6.562 0.544 -0.820 -1.024 0.569 D 4 2 3 5 3 0 8 81 101 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 13 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 13 82 101 -7.908 -0.021 -6.562 0.695 -1.348 0.482 -0.758 D 7 5 3 8 3 0 8 80 100 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 12 84 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - g - - - ML 9 8 3 11 3 1 12 81 100 -7.908 -0.021 -6.562 -0.307 0.186 0.308 -0.293 D 10 8 3 11 3 0 7 79 99 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 11 83 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 11 79 99 -8.303 -0.019 -6.620 -0.661 0.441 -1.434 0.714 D 13 11 3 14 3 0 6 78 98 -5.620 -0.734 -1.403 IL 14 14 3 14 3 1 10 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 67 - U - - MR 15 14 3 17 3 1 11 78 98 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 16 14 3 17 3 0 4 77 96 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 9 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 66 - U - - MR 18 17 3 20 3 1 10 77 97 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 19 17 3 20 3 0 4 76 95 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 9 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 65 - G - - MR 21 20 3 23 3 1 10 76 96 -8.303 -0.019 -6.620 -1.461 -2.662 1.695 -2.048 D 22 20 3 23 3 0 3 75 94 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 8 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 64 - A - - MR 24 23 3 26 5 1 9 75 95 -7.045 -0.040 -6.860 -7.072 -7.964 1.694 -2.259 -1.902 -1.791 D 25 23 3 26 5 0 2 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 6 76 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 63 G C - - MP 27 26 3 31 6 2 11 74 94 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 28 26 3 31 6 1 4 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 6 1 4 73 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 3 31 6 0 0 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 5 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 6 74 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 62 U A - - MP 33 32 6 37 6 2 10 72 92 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.076 -3.897 -3.927 -0.201 -2.893 -4.501 1.432 -3.581 -3.933 0.071 -4.311 -1.800 3.271 -4.231 -0.572 -2.768 ML 34 32 6 37 6 1 4 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 4 71 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 5 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 5 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 61 u a - - MP 39 38 6 43 6 2 10 70 90 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -2.778 -2.716 -2.850 0.678 -2.372 -3.612 1.677 -2.879 -2.884 0.938 -3.378 -0.864 2.159 -3.037 -0.214 1.142 ML 40 38 6 43 6 1 3 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 3 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 5 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 5 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 60 a u - - MP 45 44 6 49 6 2 9 68 88 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.277 -2.315 -3.393 2.388 -3.931 -4.627 0.303 -3.574 -3.261 1.668 -3.796 1.979 0.039 -3.783 -1.589 -2.238 ML 46 44 6 49 6 1 3 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 3 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 4 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 5 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 59 U A - - MP 51 50 6 55 6 2 9 66 86 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.076 -3.897 -3.927 -0.201 -2.893 -4.501 1.432 -3.581 -3.933 0.071 -4.311 -1.800 3.271 -4.231 -0.572 -2.768 ML 52 50 6 55 6 1 3 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 3 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 4 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 4 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 58 C G - - MP 57 56 6 61 6 2 9 64 84 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.440 -4.335 -4.148 -0.578 -2.890 -4.574 3.516 -3.689 -4.194 -0.321 -4.466 -2.281 0.635 -4.516 -0.594 -3.037 ML 58 56 6 61 6 1 3 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 3 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 4 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 4 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 57 U A - - MP 63 62 6 67 6 2 8 62 82 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.076 -3.897 -3.927 -0.201 -2.893 -4.501 1.432 -3.581 -3.933 0.071 -4.311 -1.800 3.271 -4.231 -0.572 -2.768 ML 64 62 6 67 6 1 2 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 2 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 3 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 4 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 56 C G - - MP 69 68 6 73 6 2 8 60 80 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.440 -4.335 -4.148 -0.578 -2.890 -4.574 3.516 -3.689 -4.194 -0.321 -4.466 -2.281 0.635 -4.516 -0.594 -3.037 ML 70 68 6 73 6 1 2 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 2 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 3 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 3 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 55 G C - - MP 75 74 6 79 6 2 7 58 78 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 76 74 6 79 6 1 2 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 2 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 3 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 3 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 54 u a - - MP 81 80 6 85 6 2 7 56 76 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -2.562 -2.546 -2.663 0.748 -2.266 -3.440 1.668 -2.746 1.029 0.940 -3.204 -0.779 2.078 -2.845 -0.170 -1.756 ML 82 80 6 85 6 1 2 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 2 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 2 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 3 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 53 a u - - MP 87 86 6 91 6 2 7 54 74 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.277 -2.315 -3.393 2.388 -3.931 -4.627 0.303 -3.574 -3.261 1.668 -3.796 1.979 0.039 -3.783 -1.589 -2.238 ML 88 86 6 91 6 1 2 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 2 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 2 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 52 G C - - MP 93 92 6 97 6 2 6 52 72 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 94 92 6 97 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 2 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 2 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 51 A U - - MP 99 98 6 103 6 2 6 50 70 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.701 -2.756 -3.726 3.270 -4.020 -5.075 0.274 -3.774 -3.622 1.176 -4.165 -0.247 -0.144 -4.277 -1.668 -2.566 ML 100 98 6 103 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 2 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 2 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 50 G C - - MP 105 104 6 109 6 2 5 48 68 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 106 104 6 109 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 2 48 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 2 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 49 a u - - MP 111 110 6 115 6 2 4 46 66 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.277 -2.315 -3.393 2.388 -3.931 -4.627 0.303 -3.574 -3.261 1.668 -3.796 1.979 0.039 -3.783 -1.589 -2.238 ML 112 110 6 115 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 48 U A - - MP 117 116 6 121 4 2 2 44 64 -6.888 -7.095 -0.055 -5.509 -4.076 -3.897 -3.927 -0.201 -2.893 -4.501 1.432 -3.581 -3.933 0.071 -4.311 -1.800 3.271 -4.231 -0.572 -2.768 ML 118 116 6 121 4 1 1 45 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 44 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 43 63 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 1 46 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 21 - C - - - ML 123 122 6 125 3 1 2 42 61 -7.908 -0.021 -6.562 -1.606 1.586 -2.425 -1.048 D 124 122 6 125 3 0 0 41 60 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 22 - C - - - ML 126 125 3 128 3 1 1 41 60 -7.908 -0.021 -6.562 -1.606 1.586 -2.425 -1.048 D 127 125 3 128 3 0 0 40 59 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 23 - a - - - ML 129 128 3 131 3 1 1 40 59 -8.303 -0.019 -6.620 0.611 0.238 -1.075 -0.289 D 130 128 3 131 3 0 0 39 58 -5.620 -0.734 -1.403 IL 131 131 3 131 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 47 - a - - MR 132 131 3 134 3 1 1 39 58 -8.303 -0.019 -6.620 0.695 -1.348 0.482 -0.758 D 133 131 3 134 3 0 0 37 56 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 46 - A - - MR 135 134 3 137 3 1 1 38 57 -8.303 -0.019 -6.620 1.694 -2.259 -1.902 -1.791 D 136 134 3 137 3 0 0 36 55 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 45 - G - - MR 138 137 3 140 5 1 1 37 56 -7.045 -0.040 -6.860 -7.072 -7.964 -1.461 -2.662 1.695 -2.048 D 139 137 3 140 5 0 0 36 55 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 44 G C - - MP 141 140 3 145 6 2 2 36 55 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 142 140 3 145 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 43 A U - - MP 147 146 6 151 4 2 2 34 53 -6.888 -7.095 -0.055 -5.509 -3.701 -2.756 -3.726 3.270 -4.020 -5.075 0.274 -3.774 -3.622 1.176 -4.165 -0.247 -0.144 -4.277 -1.668 -2.566 ML 148 146 6 151 4 1 1 34 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 4 1 1 34 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 150 146 6 151 4 0 0 33 52 -4.568 -4.250 -2.265 -0.520 IL 151 151 5 151 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 152 152 6 152 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - U - - - ML 153 152 6 155 3 1 1 31 50 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 154 152 6 155 3 0 0 30 49 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - C - - - ML 156 155 3 158 3 1 1 30 49 -7.908 -0.021 -6.562 -1.606 1.586 -2.425 -1.048 D 157 155 3 158 3 0 0 29 48 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 28 - U - - - ML 159 158 3 161 3 1 1 29 48 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 160 158 3 161 3 0 0 28 47 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 29 - C - - - ML 162 161 3 164 3 1 1 28 47 -7.908 -0.021 -6.562 -1.606 1.586 -2.425 -1.048 D 163 161 3 164 3 0 0 27 46 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 30 - U - - - ML 165 164 3 167 3 1 1 27 45 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 166 164 3 167 3 0 0 25 44 -5.620 -0.734 -1.403 IL 167 167 3 167 3 1 1 28 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 42 - C - - MR 168 167 3 170 3 1 1 26 44 -8.303 -0.019 -6.620 -1.606 1.586 -2.425 -1.048 D 169 167 3 170 3 0 0 24 43 -6.390 -1.568 -0.620 IR 170 170 3 170 3 1 1 27 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 41 - A - - MR 171 170 3 173 3 1 1 25 43 -8.303 -0.019 -6.620 1.694 -2.259 -1.902 -1.791 D 172 170 3 173 3 0 0 23 42 -6.390 -1.568 -0.620 IR 173 173 3 173 3 1 1 26 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 40 - A - - MR 174 173 3 176 3 1 1 24 42 -8.303 -0.019 -6.620 1.694 -2.259 -1.902 -1.791 D 175 173 3 176 3 0 0 22 41 -6.390 -1.568 -0.620 IR 176 176 3 176 3 1 1 25 43 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 39 - C - - MR 177 176 3 179 5 1 1 23 41 -7.045 -0.040 -6.860 -7.072 -7.964 -1.606 1.586 -2.425 -1.048 D 178 176 3 179 5 0 0 21 40 -5.352 -0.707 -2.978 -4.409 -2.404 IR 179 179 3 179 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 31 38 C G - - MP 180 179 3 184 6 2 2 22 40 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.440 -4.335 -4.148 -0.578 -2.890 -4.574 3.516 -3.689 -4.194 -0.321 -4.466 -2.281 0.635 -4.516 -0.594 -3.037 ML 181 179 3 184 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 3 184 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 3 184 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 32 37 c g - - MP 186 185 6 190 4 2 2 20 38 -6.888 -7.095 -0.055 -5.509 -3.426 -3.488 -3.335 0.046 1.552 -3.905 2.712 -3.078 -3.375 0.188 -3.770 -1.687 1.137 -3.597 -0.132 -2.318 ML 187 185 6 190 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 189 185 6 190 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 190 190 5 190 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 191 191 6 191 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - U - - - ML 192 191 6 194 3 1 1 16 35 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 193 191 6 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - a - - - ML 195 194 3 197 3 1 1 15 33 -7.908 -0.021 -6.562 0.695 -1.348 0.482 -0.758 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - u - - - ML 198 197 3 200 3 1 1 13 32 -7.908 -0.021 -6.562 -0.661 0.441 -1.434 0.714 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - u - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -0.661 0.441 -1.434 0.714 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-M7 ACC RF01009 DESC microRNA mir-M7 LENG 67 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 01:14:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01009/CM NSEQ 2 EFFN 1.738281 CKSUM 2010958657 STATS LOCAL MSV -7.9101 0.72911 STATS LOCAL VITERBI -9.5734 0.72911 STATS LOCAL FORWARD -2.9234 0.72911 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.47713 1.33454 1.40866 1.33197 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 1.01099 1.94870 2.08952 0.99443 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.90719 2.30968 1.05691 1.90033 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 1.59165 1.26197 1.17853 1.58190 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 1.83444 1.08595 2.36850 0.89381 4 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.38410 2.90909 0.22855 2.85391 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.64421 1.66936 2.35442 0.43754 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.03394 1.48645 1.76417 0.75146 7 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 1.05303 2.38465 0.79348 2.23744 8 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.64505 1.66936 2.35473 0.43740 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.88582 0.33062 2.61911 1.87835 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.64426 1.66936 2.35444 0.43753 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.88477 0.33078 2.61867 1.87818 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.38578 2.91077 0.22807 2.85635 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 1.96681 1.48117 1.24254 1.06689 14 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 1.05308 2.38396 0.79381 2.23648 15 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.38528 2.91027 0.22821 2.85563 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.49545 2.41323 1.57703 2.35822 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.38507 2.91007 0.22827 2.85533 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 1.05309 2.38378 0.79389 2.23623 19 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.64237 1.66935 2.35374 0.43785 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.46864 0.29669 3.03516 2.08783 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.46864 0.29669 3.03515 2.08783 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.96542 1.22618 2.12285 1.57951 23 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.38403 2.90902 0.22857 2.85382 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.49525 2.41370 1.57705 2.35897 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.32144 2.33575 2.82483 0.29328 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.46864 0.29669 3.03515 2.08783 27 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.32144 2.33575 2.82483 0.29328 28 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.46864 0.29669 3.03516 2.08783 29 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.32144 2.33575 2.82483 0.29328 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.88090 0.33137 2.61704 1.87758 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.44801 0.52106 2.25748 1.53699 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.32144 2.33575 2.82483 0.29328 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.90719 2.30968 1.05691 1.90033 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.83444 1.08595 2.36850 0.89381 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 1.83444 1.08595 2.36850 0.89381 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 1.10926 2.42045 0.74678 2.23095 37 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.15552 2.78929 0.28518 2.64773 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.46864 0.29669 3.03516 2.08783 39 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.21866 2.92615 2.68150 2.59903 40 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.21866 2.92615 2.68149 2.59903 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.46864 0.29669 3.03516 2.08783 42 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.59391 1.83643 2.23038 0.41794 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 3.08335 0.26558 2.74604 2.09350 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.37130 3.19920 0.21890 2.77350 45 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.21866 2.92615 2.68149 2.59903 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.90719 2.30968 1.05691 1.90033 47 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.49826 2.53129 1.50605 2.39610 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.45549 1.50961 2.18897 0.54275 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.06832 0.26747 2.74001 2.09059 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.58742 1.83604 2.22834 0.41911 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 3.06891 0.26739 2.74025 2.09070 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.45605 1.50958 2.18917 0.54264 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.89528 1.91301 1.30339 1.75874 54 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.07038 0.26721 2.74084 2.09099 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.15190 2.78501 0.28662 2.64212 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 0.49794 2.53225 1.50604 2.39741 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.15248 2.78570 0.28639 2.64302 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.49775 2.53281 1.50604 2.39819 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.45914 1.50943 2.19023 0.54203 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 1.17911 1.93514 1.31246 1.27695 61 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 0.49728 2.53423 1.50603 2.40013 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 3.08341 0.26558 2.74606 2.09351 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 0.21866 2.92615 2.68150 2.59903 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 2.37130 3.19920 0.21890 2.77351 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 2.32144 2.33575 2.82483 0.29328 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 2.32144 2.33575 2.82483 0.29328 67 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //