INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-327 ACC RF00940 DESC microRNA mir-327 STATES 190 NODES 46 CLEN 62 W 78 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 2 00:30:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/14.9/microrna/update_families/RF00940/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.761719 CKSUM 2902091581 NULL 0.000 0.000 0.000 0.000 GA 76.00 TC 76.00 NC 70.80 EFP7GF -4.9902 0.72850 ECMLC 0.65975 -5.26471 3.52789 1600000 396725 0.003025 ECMGC 0.46310 -15.41103 -3.24143 1600000 112108 0.003568 ECMLI 0.66590 -3.30785 4.91378 1600000 286315 0.004191 ECMGI 0.48672 -11.08943 -0.34526 1600000 74671 0.005357 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 78 98 -6.878 -7.085 -0.516 -1.812 IL 1 1 2 1 4 1 22 82 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 21 78 98 -7.923 -0.025 -6.241 1.421 -1.469 -1.189 -0.938 D 4 2 3 5 3 0 17 77 97 -6.826 -0.274 -2.609 IL 5 5 3 5 3 1 19 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 62 - C - - MR 6 5 3 8 5 1 20 77 97 -7.037 -0.041 -6.852 -7.064 -7.956 -1.584 1.579 -2.402 -1.030 D 7 5 3 8 5 0 13 76 96 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 18 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 61 U A - - MP 9 8 3 13 6 2 20 76 96 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 10 8 3 13 6 1 15 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 14 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 10 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 17 76 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 17 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 60 G C - - MP 15 14 6 19 6 2 18 74 94 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 16 14 6 19 6 1 14 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 13 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 10 70 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 16 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 16 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 59 C G - - MP 21 20 6 25 6 2 16 72 92 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 22 20 6 25 6 1 13 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 12 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 10 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 14 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 14 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 58 C G - - MP 27 26 6 31 4 2 14 70 90 -6.878 -7.085 -0.056 -5.499 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 28 26 6 31 4 1 12 70 91 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 11 70 90 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 9 69 89 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 14 72 92 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - C - - - ML 33 32 6 35 3 1 13 68 88 -8.294 -0.019 -6.612 -1.584 1.579 -2.402 -1.030 D 34 32 6 35 3 0 9 67 86 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 12 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 57 - U - - MR 36 35 3 38 5 1 12 67 87 -7.037 -0.041 -6.852 -7.064 -7.956 -1.366 -1.384 -2.093 1.582 D 37 35 3 38 5 0 7 65 85 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 10 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 56 U A - - MP 39 38 3 43 6 2 11 66 86 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 40 38 3 43 6 1 8 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 7 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 4 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 9 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 9 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 55 c g - - MP 45 44 6 49 6 2 9 64 84 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.639 -3.621 -3.493 0.040 -2.421 -4.025 2.696 -3.147 -3.522 0.266 -3.891 -1.690 1.167 -3.769 1.890 -2.413 ML 46 44 6 49 6 1 7 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 6 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 4 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 8 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 8 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 54 A U - - MP 51 50 6 55 4 2 7 62 82 -6.878 -7.085 -0.056 -5.499 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 52 50 6 55 4 1 6 62 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 4 62 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 3 61 81 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 7 63 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - U - - - ML 57 56 6 59 3 1 6 59 79 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 58 56 6 59 3 0 3 58 78 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - a - - - ML 60 59 3 62 3 1 5 58 78 -7.899 -0.430 -1.979 0.609 0.234 -1.069 -0.284 D 61 59 3 62 3 0 2 57 77 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 6 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - A - - - ML 63 62 3 65 3 1 5 57 77 -7.497 -0.029 -6.152 1.421 -1.469 -1.189 -0.938 D 64 62 3 65 3 0 2 56 76 -7.828 -0.357 -2.220 IL 65 65 3 65 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - C - - - ML 66 65 3 68 3 1 5 56 76 -7.899 -0.022 -6.553 -1.584 1.579 -2.402 -1.030 D 67 65 3 68 3 0 0 55 75 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - U - - - ML 69 68 3 71 3 1 4 55 75 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 70 68 3 71 3 0 0 54 74 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - U - - - ML 72 71 3 74 3 1 4 54 74 -8.294 -0.019 -6.612 -1.366 -1.384 -2.093 1.582 D 73 71 3 74 3 0 0 53 73 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 2 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 53 - U - - MR 75 74 3 77 5 1 3 53 73 -7.037 -0.041 -6.852 -7.064 -7.956 -1.366 -1.384 -2.093 1.582 D 76 74 3 77 5 0 0 52 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 77 77 3 77 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 52 G C - - MP 78 77 3 82 6 2 4 52 72 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 79 77 3 82 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 51 A U - - MP 84 83 6 88 6 2 4 50 70 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 85 83 6 88 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 50 G C - - MP 90 89 6 94 6 2 4 48 68 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 91 89 6 94 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 49 G C - - MP 96 95 6 100 6 2 4 46 66 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 97 95 6 100 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 48 G C - - MP 102 101 6 106 6 2 3 44 64 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 103 101 6 106 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 47 g u - - MP 108 107 6 112 4 2 2 42 62 -6.878 -7.085 -0.056 -5.499 -3.535 -2.336 -3.695 1.182 -4.344 -5.070 0.034 -3.729 -3.379 1.468 -3.896 2.992 -0.326 -4.294 -1.907 -2.413 ML 109 107 6 112 4 1 1 43 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 42 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 41 61 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 44 64 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 22 - C - - - ML 114 113 6 116 3 1 1 40 59 -7.899 -0.022 -6.553 -1.584 1.579 -2.402 -1.030 D 115 113 6 116 3 0 0 38 58 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 23 - A - - - ML 117 116 3 119 3 1 1 39 58 -7.899 -0.022 -6.553 1.689 -2.240 -1.885 -1.770 D 118 116 3 119 3 0 0 37 57 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 24 - U - - - ML 120 119 3 122 3 1 1 38 57 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 121 119 3 122 3 0 0 36 56 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 25 - G - - - ML 123 122 3 125 3 1 1 37 56 -8.294 -0.019 -6.612 -1.441 -2.639 1.689 -2.025 D 124 122 3 125 3 0 0 35 54 -5.620 -0.734 -1.403 IL 125 125 3 125 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 46 - a - - MR 126 125 3 128 3 1 1 36 55 -8.294 -0.019 -6.612 0.693 -1.340 0.479 -0.750 D 127 125 3 128 3 0 0 34 53 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 45 - u - - MR 129 128 3 131 3 1 1 35 54 -8.294 -0.019 -6.612 -0.654 0.437 -1.425 0.712 D 130 128 3 131 3 0 0 33 52 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 44 - A - - MR 132 131 3 134 3 1 1 34 53 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 133 131 3 134 3 0 0 32 51 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 43 - a - - MR 135 134 3 137 5 1 1 33 52 -7.037 -0.041 -6.852 -7.064 -7.956 0.693 -1.340 0.479 -0.750 D 136 134 3 137 5 0 0 31 50 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 42 a u - - MP 138 137 3 142 6 2 2 32 51 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -2.904 1.394 -3.043 2.248 -3.348 -4.053 0.596 -3.273 -2.976 1.710 -3.493 0.074 0.340 -3.304 -1.188 -2.008 ML 139 137 3 142 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 27 41 G C - - MP 144 143 6 148 6 2 2 30 49 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 145 143 6 148 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 40 g c - - MP 150 149 6 154 4 2 2 27 47 -6.878 -7.085 -0.056 -5.499 -3.629 -2.490 -3.685 1.024 -4.252 -4.455 0.186 -3.971 -3.602 2.947 -4.046 1.589 -0.100 -3.791 -1.766 -2.567 ML 151 149 6 154 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 153 149 6 154 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 154 154 5 154 4 1 1 29 49 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 155 155 6 155 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 29 - a - - - ML 156 155 6 158 3 1 1 25 44 -8.294 -0.019 -6.612 0.693 -1.340 0.479 -0.750 D 157 155 6 158 3 0 0 24 42 -5.620 -0.734 -1.403 IL 158 158 3 158 3 1 1 26 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 39 - G - - MR 159 158 3 161 5 1 1 24 43 -7.037 -0.041 -6.852 -7.064 -7.956 -1.441 -2.639 1.689 -2.025 D 160 158 3 161 5 0 0 23 41 -5.352 -0.707 -2.978 -4.409 -2.404 IR 161 161 3 161 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 30 38 U A - - MP 162 161 3 166 6 2 2 23 42 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 163 161 3 166 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 3 166 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 3 166 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 31 37 A U - - MP 168 167 6 172 4 2 2 21 40 -6.878 -7.085 -0.056 -5.499 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 169 167 6 172 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - G - - - ML 174 173 6 176 3 1 1 18 36 -7.899 -0.022 -6.553 -1.441 -2.639 1.689 -2.025 D 175 173 6 176 3 0 0 17 36 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 33 - U - - - ML 177 176 3 179 3 1 1 16 35 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 178 176 3 179 3 0 0 16 34 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - C - - - ML 180 179 3 182 3 1 1 15 33 -7.899 -0.022 -6.553 -1.584 1.579 -2.402 -1.030 D 181 179 3 182 3 0 0 15 33 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 35 - A - - - ML 183 182 3 185 3 1 1 13 32 -7.899 -0.022 -6.553 1.689 -2.240 -1.885 -1.770 D 184 182 3 185 3 0 0 13 32 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 36 - G - - - ML 186 185 3 188 2 1 1 1 1 * 0.000 -1.441 -2.639 1.689 -2.025 D 187 185 3 188 2 0 0 0 0 * 0.000 IL 188 188 3 188 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 189 188 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-327 ACC RF00940 DESC microRNA mir-327 LENG 62 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 2 00:30:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/14.9/microrna/update_families/RF00940/CM NSEQ 2 EFFN 1.683594 CKSUM 2902091581 STATS LOCAL MSV -7.9896 0.72850 STATS LOCAL VITERBI -9.3240 0.72850 STATS LOCAL FORWARD -2.7907 0.72850 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.52191 1.36969 1.29995 1.36659 1.38629 1.38629 1.38629 1.38629 0.33647 3.73767 1.33977 1.46634 0.26236 0.00000 * 1 0.41411 2.37888 2.18673 2.00890 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.06454 3.46574 3.46574 1.46634 0.26236 0.16705 1.87180 2 2.59972 1.64946 2.31569 0.45436 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.36179 2.87299 0.23642 2.81729 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.85114 0.34180 2.58314 1.85663 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.85340 0.34145 2.58408 1.85698 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.43226 0.30836 2.99720 2.05899 6 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.61253 1.64945 2.32034 0.45216 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.46539 0.86278 2.21801 0.95656 8 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.51273 2.38187 1.55432 2.32859 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.29380 2.31310 2.79557 0.30234 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.96879 1.23158 2.11306 1.57137 11 a - - - 1.38629 1.38629 1.38629 1.38629 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547 12 0.41411 2.37888 2.18673 2.00890 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.06454 3.46574 3.46574 1.46634 0.26236 0.16705 1.87180 13 2.43226 0.30836 2.99720 2.05899 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.29380 2.31310 2.79557 0.30234 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.29380 2.31310 2.79557 0.30234 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.36448 2.87565 0.23561 2.82115 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.51293 2.38142 1.55431 2.32785 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.36768 2.87879 0.23467 2.82572 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.36782 2.87894 0.23462 2.82593 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.36768 2.87880 0.23467 2.82573 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.77821 2.54614 0.40710 2.44069 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.43226 0.30836 2.99720 2.05899 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.22629 2.89556 2.65398 2.56559 23 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.29380 2.31310 2.79557 0.30234 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.33855 3.16095 0.22783 2.73506 25 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.77198 2.15831 1.24400 2.00877 26 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.36697 2.87809 0.23488 2.82470 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 1.88401 2.46579 0.40529 2.34036 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.91043 2.29690 1.06256 1.88712 29 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.61313 1.64945 2.32056 0.45205 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.51282 2.38167 1.55432 2.32826 31 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.33855 3.16095 0.22783 2.73506 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.29380 2.31310 2.79557 0.30234 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.43226 0.30836 2.99720 2.05899 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.22629 2.89556 2.65398 2.56559 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.33855 3.16095 0.22783 2.73506 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.56331 1.81045 2.19850 0.43325 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.51332 2.50121 1.48602 2.37260 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.33855 3.16095 0.22783 2.73506 39 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57142 0.70405 2.27958 1.11881 40 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 3.04884 0.27379 2.71132 2.07431 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.23662 0.98201 1.96438 0.97185 42 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.91043 2.29690 1.06256 1.88712 43 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.22629 2.89556 2.65398 2.56559 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 1.82253 1.09199 2.35503 0.89662 45 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.91043 2.29690 1.06256 1.88712 46 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.65941 1.62415 2.35213 0.44978 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 3.04315 0.27452 2.70906 2.07321 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 3.04464 0.27433 2.70966 2.07350 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.04647 0.27409 2.71038 2.07385 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.56293 1.81043 2.19838 0.43332 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 3.05141 0.27346 2.71234 2.07481 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.29380 2.31310 2.79557 0.30234 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.56188 1.81037 2.19806 0.43351 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 1.78987 2.38028 0.45634 2.23589 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.51335 2.50112 1.48602 2.37248 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.29380 2.31310 2.79557 0.30234 57 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.13089 2.75136 0.29555 2.61314 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.13117 2.75168 0.29543 2.61357 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 3.04268 0.27458 2.70888 2.07312 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 0.51398 2.49930 1.48606 2.36994 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.43226 0.30836 2.99720 2.05899 62 C - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //