INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-504 ACC RF00939 DESC microRNA mir-504 STATES 238 NODES 50 CLEN 78 W 94 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 22:12:11 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00939/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 1.014404 CKSUM 642410552 NULL 0.000 0.000 0.000 0.000 GA 57.00 TC 57.90 NC 53.40 EFP7GF -8.0088 0.71909 ECMLC 0.66419 -4.67468 3.35763 1600000 248968 0.004820 ECMGC 0.45679 -14.65193 -2.55928 1600000 100230 0.003991 ECMLI 0.63548 -3.38959 4.55087 1600000 186477 0.006435 ECMGI 0.46734 -10.04602 0.92645 1600000 67460 0.005929 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 94 114 -6.514 -6.721 -0.211 -3.115 IL 1 1 2 1 4 1 20 98 119 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 97 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 20 94 114 -7.448 -0.030 -6.102 -0.607 -0.780 -1.273 1.231 D 4 2 3 5 3 0 15 93 113 -6.809 -1.708 -0.546 IL 5 5 3 5 3 1 19 96 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 1 19 93 113 -7.911 -0.025 -6.229 -0.262 -0.985 0.978 -0.532 D 7 5 3 8 3 0 14 92 112 -5.926 -0.782 -1.314 IL 8 8 3 8 3 1 18 94 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 79 - G - - MR 9 8 3 11 3 1 19 92 112 -7.949 -0.025 -6.267 -0.256 -1.440 1.158 -0.829 D 10 8 3 11 3 0 12 91 111 -6.610 -1.788 -0.514 IR 11 11 3 11 3 1 17 93 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 78 - A - - MR 12 11 3 14 5 1 19 91 111 -6.718 -0.051 -6.534 -6.746 -7.637 1.237 -1.250 -0.714 -0.706 D 13 11 3 14 5 0 11 90 110 -5.479 -0.834 -3.106 -4.537 -1.958 IR 14 14 3 14 5 1 16 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 77 C G - - MP 15 14 3 19 6 2 19 90 110 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.741 -3.550 -3.556 0.125 -2.486 -4.068 3.185 -3.206 -3.590 0.537 -3.925 -1.487 1.093 -3.855 -0.184 -2.461 ML 16 14 3 19 6 1 13 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 13 89 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 9 86 106 -9.247 -7.945 -3.742 -4.424 -4.442 -0.274 IL 19 19 5 19 6 1 15 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 16 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 76 u a - - MP 21 20 6 25 6 2 18 88 108 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.440 -3.209 -3.351 0.429 -2.476 -3.976 1.828 -3.109 -3.368 0.854 -3.772 -1.121 2.771 -3.609 -0.171 -2.253 ML 22 20 6 25 6 1 13 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 13 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 8 84 104 -9.247 -7.945 -3.742 -4.424 -4.442 -0.274 IL 25 25 5 25 6 1 15 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 15 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 75 G C - - MP 27 26 6 31 6 2 16 86 106 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.904 -2.704 -3.961 0.727 -4.054 -4.334 0.390 -4.116 -3.727 3.346 -4.131 -0.388 -0.027 -3.905 -1.611 -2.851 ML 28 26 6 31 6 1 12 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 12 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 8 83 103 -9.247 -7.945 -3.742 -4.424 -4.442 -0.274 IL 31 31 5 31 6 1 14 86 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 14 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 74 u a - - MP 33 32 6 37 4 2 14 84 104 -6.431 -7.676 -0.110 -4.130 -3.440 -3.209 -3.351 0.429 -2.476 -3.976 1.828 -3.109 -3.368 0.854 -3.772 -1.121 2.771 -3.609 -0.171 -2.253 ML 34 32 6 37 4 1 10 84 104 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 12 83 103 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 7 81 101 -13.493 -14.763 -2.791 -0.225 IL 37 37 5 37 4 1 12 84 104 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 13 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 73 - U - - MR 39 38 6 41 5 1 15 82 102 -6.718 -0.051 -6.534 -6.746 -7.637 -0.560 -0.555 -1.259 1.153 D 40 38 6 41 5 0 7 81 101 -5.479 -0.834 -3.106 -4.537 -1.958 IR 41 41 3 41 5 1 12 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 72 u a - - MP 42 41 3 46 6 2 16 81 101 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.440 -3.209 -3.351 0.429 -2.476 -3.976 1.828 -3.109 -3.368 0.854 -3.772 -1.121 2.771 -3.609 -0.171 -2.253 ML 43 41 3 46 6 1 10 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 9 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 4 77 97 -9.247 -7.945 -3.742 -4.424 -4.442 -0.274 IL 46 46 5 46 6 1 11 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 12 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 71 G C - - MP 48 47 6 52 6 2 16 79 99 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.904 -2.704 -3.961 0.727 -4.054 -4.334 0.390 -4.116 -3.727 3.346 -4.131 -0.388 -0.027 -3.905 -1.611 -2.851 ML 49 47 6 52 6 1 9 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 9 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 4 75 95 -9.247 -7.945 -3.742 -4.424 -2.521 -0.517 IL 52 52 5 52 6 1 11 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 11 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 70 G C - - MP 54 53 6 58 6 2 15 77 97 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.904 -2.704 -3.961 0.727 -4.054 -4.334 0.390 -4.116 -3.727 3.346 -4.131 -0.388 -0.027 -3.905 -1.611 -2.851 ML 55 53 6 58 6 1 8 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 8 76 96 -7.126 -5.855 -1.763 -5.833 -0.730 -4.046 0.180 0.060 -0.489 0.153 D 57 53 6 58 6 0 3 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 10 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 11 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 69 G C - - MP 60 59 6 64 6 2 15 75 95 -8.943 -8.882 -0.024 -7.659 -7.938 -8.333 -3.904 -2.704 -3.961 0.727 -4.054 -4.334 0.390 -4.116 -3.727 3.346 -4.131 -0.388 -0.027 -3.905 -1.611 -2.851 ML 61 59 6 64 6 1 8 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 8 74 94 -7.126 -5.855 -1.374 -5.833 -0.967 -4.046 0.180 0.060 -0.489 0.153 D 63 59 6 64 6 0 3 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 10 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 10 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 68 a u - - MP 66 65 6 70 6 2 14 73 93 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.244 -2.430 -3.291 2.782 -3.356 -4.390 0.917 -3.357 -3.214 1.689 -3.731 -0.012 0.491 -3.669 -1.031 -2.165 ML 67 65 6 70 6 1 7 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 7 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 2 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 9 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 10 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 67 g u - - MP 72 71 6 76 6 2 14 71 91 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.164 -2.154 -3.285 1.364 -3.626 -4.396 0.672 -3.379 -3.094 1.958 -3.597 2.355 0.309 -3.672 -1.264 -2.101 ML 73 71 6 76 6 1 7 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 7 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 2 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 9 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 9 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 66 a u - - MP 78 77 6 82 6 2 13 69 89 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.244 -2.430 -3.291 2.782 -3.356 -4.390 0.917 -3.357 -3.214 1.689 -3.731 -0.012 0.491 -3.669 -1.031 -2.165 ML 79 77 6 82 6 1 6 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 6 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 2 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 8 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 9 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 65 C G - - MP 84 83 6 88 6 2 12 67 87 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 85 83 6 88 6 1 6 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 6 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 2 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 8 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 8 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 64 C G - - MP 90 89 6 94 6 2 11 65 85 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 91 89 6 94 6 1 6 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 5 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 1 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 7 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 7 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 63 C G - - MP 96 95 6 100 6 2 9 63 83 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 97 95 6 100 6 1 5 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 4 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 1 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 6 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 6 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 62 u a - - MP 102 101 6 106 6 2 8 61 81 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.492 -3.269 -3.399 0.375 -2.509 -4.021 1.797 -3.147 -3.414 0.780 -3.818 -1.182 2.831 -3.661 -0.203 -2.296 ML 103 101 6 106 6 1 4 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 3 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 1 58 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 5 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 5 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 61 G C - - MP 108 107 6 112 4 2 6 59 79 -6.514 -6.721 -0.072 -5.135 -3.979 -2.738 -4.037 0.682 -4.159 -4.369 0.300 -4.202 -3.785 3.383 -4.182 -0.422 -0.113 -3.956 -1.703 -2.926 ML 109 107 6 112 4 1 3 60 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 2 59 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 1 58 78 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 5 61 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 4 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - G - - - ML 114 113 6 116 3 1 5 57 77 -7.986 -0.024 -6.304 -0.747 -1.813 1.424 -1.200 D 115 113 6 116 3 0 0 56 75 -5.620 -0.734 -1.403 IL 116 116 3 116 3 1 3 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 60 - G - - MR 117 116 3 119 5 1 4 56 76 -6.752 -0.050 -6.568 -6.780 -7.672 -0.747 -1.813 1.424 -1.200 D 118 116 3 119 5 0 0 55 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 119 119 3 119 5 1 2 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 59 u g - - MP 120 119 3 124 6 2 6 55 75 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.367 -3.243 -3.228 0.346 -2.243 -3.777 2.019 -2.932 -3.263 0.685 -3.632 -1.262 1.291 -3.512 2.318 -2.172 ML 121 119 3 124 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 3 124 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 3 124 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 2 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 2 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 58 C G - - MP 126 125 6 130 6 2 5 53 73 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 127 125 6 130 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 2 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 2 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 57 u a - - MP 132 131 6 136 6 2 5 51 71 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.492 -3.269 -3.399 0.375 -2.509 -4.021 1.797 -3.147 -3.414 0.780 -3.818 -1.182 2.831 -3.661 -0.203 -2.296 ML 133 131 6 136 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 56 G C - - MP 138 137 6 142 6 2 4 49 69 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.979 -2.738 -4.037 0.682 -4.159 -4.369 0.300 -4.202 -3.785 3.383 -4.182 -0.422 -0.113 -3.956 -1.703 -2.926 ML 139 137 6 142 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 55 C G - - MP 144 143 6 148 4 2 2 47 67 -6.514 -6.721 -0.072 -5.135 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 145 143 6 148 4 1 1 47 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 47 66 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 46 65 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 48 68 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - A - - - ML 150 149 6 152 3 1 1 44 64 -7.986 -0.024 -6.304 1.479 -1.595 -1.303 -1.071 D 151 149 6 152 3 0 0 43 63 -5.620 -0.734 -1.403 IL 152 152 3 152 3 1 1 45 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 54 - u - - MR 153 152 3 155 5 1 1 43 63 -6.752 -0.050 -6.568 -6.780 -7.672 0.097 0.220 -0.909 0.303 D 154 152 3 155 5 0 0 42 62 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 26 53 C G - - MP 156 155 3 160 6 2 2 42 62 -6.384 -8.896 -0.038 -7.673 -7.952 -8.347 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 157 155 3 160 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 42 61 -2.701 -2.964 -0.681 -4.619 -5.395 -5.056 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 28 52 u a - - MP 162 161 6 166 6 2 2 40 60 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.492 -3.269 -3.399 0.375 -2.509 -4.021 1.797 -3.147 -3.414 0.780 -3.818 -1.182 2.831 -3.661 -0.203 -2.296 ML 163 161 6 166 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 29 51 C G - - MP 168 167 6 172 6 2 2 38 58 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.806 -3.625 -3.611 0.058 -2.521 -4.116 3.227 -3.250 -3.645 0.450 -3.976 -1.564 1.054 -3.917 -0.219 -2.514 ML 169 167 6 172 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 30 50 u g - - MP 174 173 6 178 4 2 2 36 56 -6.514 -6.721 -0.072 -5.135 -3.367 -3.243 -3.228 0.346 -2.243 -3.777 2.019 -2.932 -3.263 0.685 -3.632 -1.262 1.291 -3.512 2.318 -2.172 ML 175 173 6 178 4 1 1 37 56 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 4 1 1 36 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 177 173 6 178 4 0 0 35 55 -4.568 -4.250 -2.265 -0.520 IL 178 178 5 178 4 1 1 38 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 179 179 6 179 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - A - - - ML 180 179 6 182 3 1 1 34 53 -7.986 -0.024 -6.304 1.063 -1.146 -0.338 -0.583 D 181 179 6 182 3 0 0 33 52 -5.620 -0.734 -1.403 IL 182 182 3 182 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 49 - G - - MR 183 182 3 185 3 1 1 33 52 -7.986 -0.024 -6.304 -0.747 -1.813 1.424 -1.200 D 184 182 3 185 3 0 0 31 50 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 48 - A - - MR 186 185 3 188 5 1 1 32 51 -6.752 -0.050 -6.568 -6.780 -7.672 1.479 -1.595 -1.303 -1.071 D 187 185 3 188 5 0 0 31 50 -5.352 -0.707 -2.978 -4.409 -2.404 IR 188 188 3 188 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 32 47 u a - - MP 189 188 3 193 6 2 2 31 50 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.492 -3.269 -3.399 0.375 -2.509 -4.021 1.797 -3.147 -3.414 0.780 -3.818 -1.182 2.831 -3.661 -0.203 -2.296 ML 190 188 3 193 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 33 46 C G - - MP 195 194 6 199 4 2 2 29 48 -6.514 -6.721 -0.072 -5.135 -3.388 -3.379 -3.340 0.189 -0.848 -3.962 3.114 -3.148 -3.377 0.419 -3.789 -1.499 1.125 -3.575 -0.232 -2.316 ML 196 194 6 199 4 1 1 29 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 198 194 6 199 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 199 199 5 199 4 1 1 31 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 200 200 6 200 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - U - - - ML 201 200 6 203 3 1 1 26 45 -7.986 -0.024 -6.304 -0.794 -0.923 -1.480 1.343 D 202 200 6 203 3 0 0 25 44 -5.620 -0.734 -1.403 IL 203 203 3 203 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 45 - U - - MR 204 203 3 206 5 1 1 25 44 -6.752 -0.050 -6.568 -6.780 -7.672 -0.323 -0.716 -1.138 1.096 D 205 203 3 206 5 0 0 24 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 206 206 3 206 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 35 44 G C - - MP 207 206 3 211 6 2 2 24 43 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -3.773 -2.602 -3.840 0.852 -4.134 -4.317 0.315 -4.077 -3.661 3.294 -4.081 0.013 -0.020 -3.802 -1.673 -2.740 ML 208 206 3 211 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 3 211 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 3 211 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 36 43 u a - - MP 213 212 6 217 6 2 2 22 41 -8.957 -8.896 -0.023 -7.673 -7.952 -8.347 -2.607 -2.558 -2.729 0.800 -2.405 -3.538 1.583 -2.853 -1.973 1.114 -3.293 -0.747 2.558 -2.873 -0.278 -1.327 ML 214 212 6 217 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 37 42 a u - - MP 219 218 6 223 4 2 2 20 39 -6.514 -6.721 -0.072 -5.135 -2.871 -2.408 -1.873 2.630 -2.957 -3.867 1.082 -3.135 -3.000 1.631 -3.513 -0.246 0.745 -3.145 -0.773 -1.968 ML 220 218 6 223 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 222 218 6 223 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 223 223 5 223 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 224 224 6 224 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 38 - u - - - ML 225 224 6 227 3 1 1 16 35 -7.566 -0.027 -6.220 0.035 -0.651 -0.969 0.870 D 226 224 6 227 3 0 0 16 35 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 39 - u - - - ML 228 227 3 230 3 1 1 15 34 -7.566 -0.027 -6.220 0.197 -0.735 0.138 0.205 D 229 227 3 230 3 0 0 15 33 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 40 - C - - - ML 231 230 3 233 3 1 1 13 32 -7.566 -0.027 -6.220 -0.843 1.253 -1.617 -0.447 D 232 230 3 233 3 0 0 13 32 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 41 - U - - - ML 234 233 3 236 2 1 1 1 1 * 0.000 -0.311 -0.713 -1.131 1.089 D 235 233 3 236 2 0 0 0 0 * 0.000 IL 236 236 3 236 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 49 ] - - - - - - E 237 236 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-504 ACC RF00939 DESC microRNA mir-504 LENG 78 MAXL 169 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 22:12:11 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00939/CM NSEQ 15 EFFN 1.944580 CKSUM 642410552 STATS LOCAL MSV -8.8106 0.71909 STATS LOCAL VITERBI -9.4970 0.71909 STATS LOCAL FORWARD -3.6636 0.71909 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.57957 1.41149 1.18407 1.41007 1.38629 1.38629 1.38629 1.38629 0.17076 3.78107 2.00858 1.46634 0.26236 0.00000 * 1 2.20456 2.24026 2.70070 0.33392 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.05268 3.66298 3.66298 1.46634 0.26236 1.16647 0.37319 2 1.83806 2.29461 0.48708 2.07419 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.05073 3.69965 3.69965 1.46634 0.26236 0.86668 0.54532 3 2.89912 0.32327 2.64502 1.89617 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 4 2.66710 1.68875 2.38441 0.42518 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 5 2.40272 2.94069 0.22210 2.88487 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 6 2.67062 1.68878 2.38574 0.42461 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 7 2.65366 1.68861 2.37931 0.42738 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 8 2.39746 2.93531 0.22359 2.87714 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 9 2.40034 2.93826 0.22277 2.88137 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 10 2.40159 2.93953 0.22242 2.88320 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 0.55011 0.86012 11 0.43535 2.53455 1.66363 2.47435 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 12 1.83198 2.69009 0.36260 2.57488 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 13 0.43522 2.53494 1.66368 2.47495 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 14 2.98941 0.29593 2.74126 1.95649 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 15 2.98955 0.29591 2.74133 1.95652 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 16 2.98964 0.29590 2.74136 1.95653 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 17 2.75105 1.74664 2.47814 0.38878 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 18 2.45464 3.02847 0.20526 2.97042 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 19 2.49053 3.33765 0.18961 2.91264 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 20 2.75255 1.48237 2.51941 0.46421 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 21 2.99386 0.29532 2.74323 1.95722 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 22 2.75508 1.74673 2.47974 0.38818 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 23 2.45737 3.03140 0.20454 2.97459 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 24 2.99461 0.29522 2.74356 1.95735 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 25 0.19305 3.03829 2.78234 2.72191 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 26 2.99105 0.29570 2.74199 1.95676 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.09024 2.75693 3.78107 0.60905 0.78497 1.09861 0.40547 27 2.75141 1.74665 2.47828 0.38873 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 28 2.99309 0.29542 2.74289 1.95710 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 29 2.75560 1.48225 2.52070 0.46378 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 30 0.52317 2.43317 1.64865 2.06128 31 A - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 31 2.75162 1.74665 2.47837 0.38870 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 32 2.75432 0.35562 2.55388 1.84623 33 C - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 33 2.42358 2.41975 2.93250 0.26242 34 U - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 34 2.25988 2.90673 0.24847 2.79711 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 35 2.17834 1.77116 1.91835 0.56249 36 U - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 36 0.45397 2.39340 1.76161 2.28465 37 A - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 37 1.44251 2.00059 2.26811 0.64454 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 38 1.27661 2.00592 1.20533 1.24866 39 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 39 2.60303 0.25783 3.17438 2.19461 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 40 1.81949 2.10792 2.47646 0.45830 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 41 2.51507 1.95986 2.09761 0.42233 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 42 0.62952 2.15193 1.58985 1.91777 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 43 3.02782 0.31580 2.73577 1.84813 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 44 1.83249 2.11258 2.48434 0.45306 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 45 1.83720 2.72073 0.36249 2.53868 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 46 0.44034 2.66295 1.58368 2.51059 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 47 0.19305 3.03829 2.78234 2.72191 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 48 2.49053 3.33765 0.18961 2.91264 49 G - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 49 1.99843 2.69529 0.33524 2.50397 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 50 2.23356 2.91175 0.25519 2.75353 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 51 0.44092 2.66092 1.58360 2.50794 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 52 2.23643 2.91536 0.25416 2.75810 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 53 1.35738 1.12082 2.16822 1.19643 54 c - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 54 2.23297 2.91101 0.25540 2.75260 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 55 3.18859 0.24023 2.86400 2.16040 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 56 0.44086 2.66112 1.58361 2.50819 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 57 2.23513 2.91371 0.25463 2.75602 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 58 2.00061 2.69819 0.33414 2.50754 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 59 2.49053 3.33765 0.18961 2.91264 60 G - - - 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 60 3.17813 0.24139 2.85963 2.15838 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 61 0.44181 2.65781 1.58348 2.50386 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 62 2.23035 2.90773 0.25634 2.74845 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 63 2.23025 2.90761 0.25637 2.74830 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 64 2.23008 2.90740 0.25643 2.74803 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 65 2.70107 1.93461 2.34853 0.36690 66 U - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 66 2.78592 1.74023 2.49235 0.38547 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 67 2.69825 1.93437 2.34757 0.36736 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 68 3.09180 0.26140 2.77496 2.10166 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.04667 3.78107 3.78107 1.46634 0.26236 1.09861 0.40547 69 3.08585 0.26216 2.77295 2.10009 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.08879 3.78107 2.77791 1.46634 0.26236 1.09861 0.40547 70 3.10075 0.25991 2.77280 2.10886 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 71 0.48258 2.56529 1.52553 2.42576 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 72 2.08500 1.93720 2.59094 0.42062 73 U - - - 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 73 0.48275 2.56477 1.52553 2.42506 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 74 3.10311 0.25962 2.77376 2.10931 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 75 0.48247 2.56566 1.52553 2.42625 76 A - - > 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 76 2.17480 2.82027 0.27733 2.67399 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 77 0.38017 2.56081 2.04276 2.21325 78 A - - : 1.38629 1.38629 1.38629 1.38629 0.04863 3.74090 3.74090 1.46634 0.26236 1.55326 0.23769 78 1.82563 2.81347 0.37390 2.39865 79 G - - : 1.38629 1.38629 1.38629 1.38629 0.02461 3.71688 * 1.46634 0.26236 0.00000 * //