INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-471 ACC RF00932 DESC microRNA mir-471 STATES 202 NODES 45 CLEN 66 W 82 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 23:37:51 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00932/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.417969 CKSUM 3232501025 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 99.40 NC 67.80 EFP7GF -5.4751 0.72332 ECMLC 0.68153 -4.48709 4.01175 1600000 393293 0.003051 ECMGC 0.41957 -15.01034 -0.41664 1600000 182517 0.002192 ECMLI 0.65721 -3.02653 5.10570 1600000 251372 0.004774 ECMGI 0.46509 -9.31749 2.86087 1600000 115320 0.003469 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 101 -6.721 -6.928 -0.062 -5.343 IL 1 1 2 1 4 1 10 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 9 82 101 -7.755 -0.024 -6.409 -1.111 -1.176 -1.822 1.491 D 4 2 3 5 3 0 4 80 100 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 8 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 8 81 100 -8.160 -0.021 -6.478 -1.135 -2.279 1.596 -1.664 D 7 5 3 8 3 0 3 79 99 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 7 82 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - A - - MR 9 8 3 11 3 1 7 80 99 -8.160 -0.021 -6.478 1.611 -1.956 -1.629 -1.460 D 10 8 3 11 3 0 2 78 98 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 6 81 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - G - - MR 12 11 3 14 5 1 7 79 98 -6.913 -0.044 -6.728 -6.940 -7.832 -1.135 -2.279 1.596 -1.664 D 13 11 3 14 5 0 1 77 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 5 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 64 C G - - MP 15 14 3 19 6 2 6 78 97 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -4.138 -4.002 -3.894 -0.277 -2.710 -4.359 3.400 -3.478 -3.933 0.033 -4.235 -1.946 0.841 -4.232 -0.410 -2.788 ML 16 14 3 19 6 1 3 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 2 77 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 0 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 4 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 4 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 63 U A - - MP 21 20 6 25 4 2 4 76 95 -6.721 -6.928 -0.062 -5.343 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 22 20 6 25 4 1 2 76 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 1 76 95 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 0 74 94 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 3 77 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 3 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - U - - - ML 27 26 6 29 3 1 3 73 93 -8.160 -0.021 -6.478 -1.111 -1.176 -1.822 1.491 D 28 26 6 29 3 0 0 72 91 -5.620 -0.734 -1.403 IL 29 29 3 29 3 1 2 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 62 - u - - MR 30 29 3 32 5 1 3 72 92 -6.913 -0.044 -6.728 -6.940 -7.832 -0.544 0.379 -1.300 0.685 D 31 29 3 32 5 0 0 71 90 -5.352 -0.707 -2.978 -4.409 -2.404 IR 32 32 3 32 5 1 1 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 61 U A - - MP 33 32 3 37 6 2 4 71 91 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 34 32 3 37 6 1 1 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 1 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 60 A U - - MP 39 38 6 43 6 2 4 69 89 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.469 -2.588 -3.508 3.071 -3.689 -4.728 0.592 -3.568 -3.416 1.429 -3.947 -0.122 0.172 -3.967 -1.351 -2.364 ML 40 38 6 43 6 1 1 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 59 C G - - MP 45 44 6 49 6 2 4 67 87 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -4.138 -4.002 -3.894 -0.277 -2.710 -4.359 3.400 -3.478 -3.933 0.033 -4.235 -1.946 0.841 -4.232 -0.410 -2.788 ML 46 44 6 49 6 1 1 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 58 g u - - MP 51 50 6 55 6 2 3 65 85 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.362 -2.239 -3.504 1.276 -4.011 -4.749 0.330 -3.566 -3.243 1.699 -3.753 2.752 -0.031 -4.002 -1.609 -2.265 ML 52 50 6 55 6 1 1 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 57 U A - - MP 57 56 6 61 6 2 3 63 83 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 58 56 6 61 6 1 1 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 63 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 56 A U - - MP 63 62 6 67 6 2 3 61 81 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.469 -2.588 -3.508 3.071 -3.689 -4.728 0.592 -3.568 -3.416 1.429 -3.947 -0.122 0.172 -3.967 -1.351 -2.364 ML 64 62 6 67 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 55 G C - - MP 69 68 6 73 6 2 3 59 79 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -4.338 -2.904 -4.408 0.461 -4.663 -4.529 -0.125 -4.616 -4.051 3.524 -4.419 -0.591 -0.523 -4.200 -2.143 -3.292 ML 70 68 6 73 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 54 U A - - MP 75 74 6 79 6 2 2 57 77 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 76 74 6 79 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 57 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 53 A U - - MP 81 80 6 85 6 2 2 55 75 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.469 -2.588 -3.508 3.071 -3.689 -4.728 0.592 -3.568 -3.416 1.429 -3.947 -0.122 0.172 -3.967 -1.351 -2.364 ML 82 80 6 85 6 1 1 54 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 52 U A - - MP 87 86 6 91 4 2 2 53 73 -6.721 -6.928 -0.062 -5.343 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 88 86 6 91 4 1 1 54 73 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 1 53 73 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 0 52 72 -4.568 -4.250 -2.265 -0.520 IL 91 91 5 91 4 1 1 55 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - A - - - ML 93 92 6 95 3 1 1 51 70 -8.160 -0.021 -6.478 1.611 -1.956 -1.629 -1.460 D 94 92 6 95 3 0 0 49 69 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 51 - C - - MR 96 95 3 98 5 1 1 50 69 -6.913 -0.044 -6.728 -6.940 -7.832 -1.249 1.459 -2.050 -0.765 D 97 95 3 98 5 0 0 48 68 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 50 G C - - MP 99 98 3 103 6 2 2 49 68 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -4.338 -2.904 -4.408 0.461 -4.663 -4.529 -0.125 -4.616 -4.051 3.524 -4.419 -0.591 -0.523 -4.200 -2.143 -3.292 ML 100 98 3 103 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 48 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 49 u g - - MP 105 104 6 109 6 2 2 47 66 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.680 -3.581 -3.475 0.042 -2.370 -3.970 1.904 -3.100 -3.512 0.309 -3.848 -1.595 1.118 -3.802 2.688 -2.405 ML 106 104 6 109 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 48 g u - - MP 111 110 6 115 6 2 2 45 64 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.362 -2.239 -3.504 1.276 -4.011 -4.749 0.330 -3.566 -3.243 1.699 -3.753 2.752 -0.031 -4.002 -1.609 -2.265 ML 112 110 6 115 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 47 C G - - MP 117 116 6 121 6 2 2 43 62 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -4.138 -4.002 -3.894 -0.277 -2.710 -4.359 3.400 -3.478 -3.933 0.033 -4.235 -1.946 0.841 -4.232 -0.410 -2.788 ML 118 116 6 121 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 46 u g - - MP 123 122 6 127 6 2 2 41 60 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.680 -3.581 -3.475 0.042 -2.370 -3.970 1.904 -3.100 -3.512 0.309 -3.848 -1.595 1.118 -3.802 2.688 -2.405 ML 124 122 6 127 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 45 U A - - MP 129 128 6 133 6 2 2 39 58 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 130 128 6 133 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 44 U A - - MP 135 134 6 139 6 2 2 37 56 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 136 134 6 139 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 43 U A - - MP 141 140 6 145 6 2 2 35 54 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.781 -3.588 -3.662 0.084 -2.698 -4.263 1.619 -3.362 -3.672 0.411 -4.065 -1.499 3.088 -3.946 -0.384 -2.533 ML 142 140 6 145 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 42 C G - - MP 147 146 6 151 6 2 2 33 52 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -4.138 -4.002 -3.894 -0.277 -2.710 -4.359 3.400 -3.478 -3.933 0.033 -4.235 -1.946 0.841 -4.232 -0.410 -2.788 ML 148 146 6 151 6 1 1 31 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 26 41 A U - - MP 153 152 6 157 6 2 2 31 50 -9.025 -8.964 -0.022 -7.741 -8.021 -8.416 -3.469 -2.588 -3.508 3.071 -3.689 -4.728 0.592 -3.568 -3.416 1.429 -3.947 -0.122 0.172 -3.967 -1.351 -2.364 ML 154 152 6 157 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 30 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 27 40 C G - - MP 159 158 6 163 4 2 2 29 48 -6.721 -6.928 -0.062 -5.343 -4.138 -4.002 -3.894 -0.277 -2.710 -4.359 3.400 -3.478 -3.933 0.033 -4.235 -1.946 0.841 -4.232 -0.410 -2.788 ML 160 158 6 163 4 1 1 29 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 31 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 28 - A - - - ML 165 164 6 167 3 1 1 26 45 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 166 164 6 167 3 0 0 25 44 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 29 - U - - - ML 168 167 3 170 3 1 1 25 44 -7.755 -0.024 -6.409 -1.111 -1.176 -1.822 1.491 D 169 167 3 170 3 0 0 24 43 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - U - - - ML 171 170 3 173 3 1 1 24 43 -7.755 -0.024 -6.409 -1.111 -1.176 -1.822 1.491 D 172 170 3 173 3 0 0 23 42 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - A - - - ML 174 173 3 176 3 1 1 23 41 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 175 173 3 176 3 0 0 21 40 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - a - - - ML 177 176 3 179 3 1 1 21 40 -7.755 -0.024 -6.409 0.578 0.183 -0.978 -0.209 D 178 176 3 179 3 0 0 20 39 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - A - - - ML 180 179 3 182 3 1 1 20 39 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 181 179 3 182 3 0 0 19 38 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 34 - C - - - ML 183 182 3 185 3 1 1 19 38 -7.755 -0.024 -6.409 -1.249 1.459 -2.050 -0.765 D 184 182 3 185 3 0 0 18 37 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - A - - - ML 186 185 3 188 3 1 1 18 36 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 187 185 3 188 3 0 0 17 36 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 36 - A - - - ML 189 188 3 191 3 1 1 16 35 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 190 188 3 191 3 0 0 16 34 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 37 - A - - - ML 192 191 3 194 3 1 1 15 33 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 193 191 3 194 3 0 0 15 33 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 38 - A - - - ML 195 194 3 197 3 1 1 13 32 -7.755 -0.024 -6.409 1.611 -1.956 -1.629 -1.460 D 196 194 3 197 3 0 0 13 32 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 39 - A - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 1.611 -1.956 -1.629 -1.460 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 44 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-471 ACC RF00932 DESC microRNA mir-471 LENG 66 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 23:37:51 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00932/CM NSEQ 2 EFFN 1.847656 CKSUM 3232501025 STATS LOCAL MSV -8.3129 0.72332 STATS LOCAL VITERBI -9.1629 0.72332 STATS LOCAL FORWARD -3.4662 0.72332 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.22577 1.61219 1.44684 1.30304 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.37602 2.38058 2.88245 0.27630 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.43537 3.27376 0.20256 2.84844 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.94168 0.31149 2.68471 1.91987 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.70340 1.70998 2.42105 0.41049 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.37602 2.38058 2.88245 0.27630 5 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.70071 1.70993 2.42002 0.41091 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.46193 2.47877 1.62292 2.42176 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.94510 0.31099 2.68619 1.92042 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 1.81262 2.63895 0.37757 2.52806 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.70321 1.70997 2.42098 0.41052 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.46198 2.47864 1.62291 2.42156 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.42392 2.97554 0.21511 2.91969 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.70180 1.70995 2.42044 0.41074 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.46214 2.47820 1.62287 2.42088 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.70112 1.70994 2.42017 0.41085 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.20450 2.98625 2.73554 2.66483 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.42201 2.97354 0.21563 2.91684 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.70789 1.45927 2.46606 0.48451 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 1.81254 2.63880 0.37763 2.52786 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.94454 0.31108 2.68594 1.92033 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.70850 1.45924 2.46632 0.48442 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.70256 1.70996 2.42073 0.41062 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.70212 1.70996 2.42056 0.41069 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.70171 1.70995 2.42040 0.41076 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.94188 0.31146 2.68480 1.91990 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.46219 2.47808 1.62286 2.42068 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.94114 0.31157 2.68448 1.91979 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.20450 2.98625 2.73554 2.66483 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.37602 2.38058 2.88245 0.27630 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.37602 2.38058 2.88245 0.27630 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.20450 2.98625 2.73554 2.66483 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.95884 1.21572 2.14225 1.59565 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.20450 2.98625 2.73554 2.66483 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.54049 0.27512 3.10977 2.14487 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.20450 2.98625 2.73554 2.66483 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.20450 2.98625 2.73554 2.66483 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.20450 2.98625 2.73554 2.66483 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.20450 2.98625 2.73554 2.66483 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.20450 2.98625 2.73554 2.66483 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.19372 2.85096 0.26991 2.69917 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.64952 1.88831 2.29257 0.39011 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.19406 2.85138 0.26978 2.69971 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.46710 2.59937 1.54672 2.45438 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.46702 2.59961 1.54673 2.45470 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.46694 2.59989 1.54673 2.45508 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 1.96803 2.63966 0.35207 2.45745 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.19587 2.85359 0.26910 2.70254 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.74753 1.69760 2.44396 0.40650 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 1.96940 2.64142 0.35135 2.45967 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.14517 0.25099 2.81164 2.13026 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.54049 0.27512 3.10977 2.14487 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.46720 2.59905 1.54672 2.45396 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.64996 1.88835 2.29272 0.39004 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.46708 2.59942 1.54672 2.45444 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.13252 0.25247 2.80647 2.12782 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.65164 1.88847 2.29327 0.38975 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 0.46680 2.60033 1.54674 2.45566 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.74641 1.69759 2.44354 0.40667 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.19667 2.85456 0.26880 2.70379 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.65639 1.88882 2.29482 0.38895 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 0.46600 2.60295 1.54679 2.45916 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 1.85801 1.07424 2.39511 0.88844 62 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 0.46625 2.60211 1.54677 2.45805 63 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.19868 2.85703 0.26805 2.70696 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 2.43537 3.27376 0.20256 2.84844 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 0.20450 2.98625 2.73554 2.66483 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //