# STOCKHOLM 1.0
#=GF ID mir-789
#=GF AC RF00905
#=GF DE mir-789 microRNA precursor family
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 100.0
#=GF NC 67.8
#=GF TC 104.7
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000373;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 17174894
#=GF RT Large-scale sequencing reveals 21U-RNAs and additional microRNAs and
#=GF RT endogenous siRNAs in C. elegans.
#=GF RA Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP
#=GF RL Cell. 2006;127:1193-1207.
#=GF RN [2]
#=GF RM 19460142
#=GF RT Dynamic expression of small non-coding RNAs, including novel microRNAs and
#=GF RT piRNAs/21U-RNAs, during Caenorhabditis elegans development.
#=GF RA Kato M, de Lencastre A, Pincus Z, Slack FJ
#=GF RL Genome Biol. 2009;10:R54.
#=GF RN [3]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF WK MicroRNA
#=GF SQ 3

URS00006128BE_6239/1-97 UGUCCUGAAGGCAGG--CAAUUGAUGACCCAGACAAGGACUAAUCAAGAUUGUCGAUCUAGUCCCUGCCUGGGUCACCAAUUGU-CGGCCCCCGCGGGCA
URS000023BF59_6239/1-97 UGUCCUGAAGGCGGA--CAAUUGAUGACUCAGGCAGGGACUAAUCAUGAUUGUCGAUUUAGUCCCUGCCUGGGUCACCAAUUGU-CGGCCCCCGCGGACA
URS0000D520EE_6238/1-96 UUGCCCGACUUCGGAUUCACGUGGUCAUCCAGGCGGUGCACGUUAAAAGAUAUAAAU----GCCCUGCCUGGGUCACCAUGUGAAUAGGGAAUACGGUCA
#=GC SS_cons            <<<<<<<--<<<-<<..<<<<<<-<<<<<<<<<<<<<<<<<-<<<_________>>>-->>>>>>>>>>>>>>>>>->>>>>>>.>->>>-->>->>>>>
#=GC RF                 ugcCCcgAaggCggg..CacuuGaugaccCaGgCaggGccuaaucAagauUgUagauuUaggCccuGcCuGggucaCCaaguGc.cgGccaacgCGGgca
//
