INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-274 ACC RF00822 DESC microRNA mir-274 STATES 295 NODES 69 CLEN 97 W 136 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 18:49:58 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00822/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 13 EFFN 1.253662 CKSUM 349282164 NULL 0.000 0.000 0.000 0.000 GA 56.00 TC 58.40 NC 55.30 EFP7GF -6.4302 0.71882 ECMLC 0.67187 -4.19927 3.40866 1600000 199112 0.006027 ECMGC 0.46737 -13.14333 -2.50865 1600000 57631 0.006941 ECMLI 0.65609 -1.97587 5.32067 1600000 143959 0.008336 ECMGI 0.49751 -7.08322 2.26283 1600000 41822 0.009564 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 136 188 -6.640 -6.847 -0.369 -2.274 IL 1 1 2 1 4 2 37 139 190 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 36 138 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 3 37 136 188 -7.421 -0.030 -6.075 -0.342 -0.163 -1.045 0.874 D 4 2 3 5 3 0 29 134 186 -7.346 -1.704 -0.542 IL 5 5 3 5 3 2 36 137 188 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 2 37 135 187 -7.931 -0.025 -6.248 -0.344 -1.187 1.017 -0.417 D 7 5 3 8 3 0 28 134 185 -6.234 -1.060 -0.980 IL 8 8 3 8 3 1 34 136 187 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 112 - a - - MR 9 8 3 11 5 2 37 134 186 -6.740 -0.050 -6.556 -6.768 -7.659 0.822 -0.286 -0.850 -0.223 D 10 8 3 11 5 0 27 132 183 -5.740 -1.095 -3.366 -4.797 -1.395 IR 11 11 3 11 5 1 34 135 186 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 111 u a - - MP 12 11 3 16 6 3 38 134 185 -8.952 -8.891 -0.024 -7.668 -7.947 -8.342 -3.310 -3.185 -3.245 0.435 -2.380 -3.867 1.910 -3.028 -3.277 0.815 -3.692 -1.196 2.647 -3.469 0.306 -2.172 ML 13 11 3 16 6 1 30 131 183 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 30 131 183 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 24 127 179 -9.626 -8.324 -4.121 -2.721 -4.821 -0.413 IL 16 16 5 16 6 1 32 133 184 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 33 133 184 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 110 g c - - MP 18 17 6 22 6 3 37 132 183 -8.952 -8.891 -0.024 -7.668 -7.947 -8.342 -3.027 -2.510 -3.046 1.036 -2.746 -3.757 1.543 -3.141 -3.115 2.450 -3.561 -0.368 1.094 -3.142 0.424 -2.017 ML 19 17 6 22 6 1 30 129 181 -6.434 -6.780 -1.494 -0.841 -6.630 -4.159 0.260 -0.620 0.308 -0.131 MR 20 17 6 22 6 1 29 129 181 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 23 125 176 -9.448 -8.147 -3.944 -4.626 -4.643 -0.235 IL 22 22 5 22 6 1 32 131 182 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 32 131 182 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 109 c g - - MP 24 23 6 28 6 3 35 130 181 -8.952 -8.891 -0.024 -7.668 -7.947 -8.342 -2.794 -2.642 -2.845 1.303 -2.297 -3.582 2.053 -2.825 -2.880 1.325 -3.359 -0.690 1.545 -3.000 0.873 -1.835 ML 25 23 6 28 6 1 29 128 179 -6.434 -6.780 -1.075 -1.189 -6.630 -4.159 0.145 -0.370 -0.441 0.468 MR 26 23 6 28 6 1 29 127 179 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 23 123 174 -9.448 -8.147 -3.944 -4.626 -4.643 -0.235 IL 28 28 5 28 6 1 31 129 180 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 32 129 180 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 108 u a - - MP 30 29 6 34 6 3 34 128 179 -8.968 -8.907 -0.023 -7.684 -7.964 -8.359 -2.840 -2.495 -2.916 1.050 -2.566 -3.743 1.669 -2.966 -2.928 1.582 -3.429 0.460 2.047 -3.082 -0.299 -1.879 ML 31 29 6 34 6 1 29 126 177 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 28 125 177 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 23 121 173 -9.448 -8.147 -3.944 -4.626 -4.643 -0.235 IL 34 34 5 34 6 1 30 127 178 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 31 127 178 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 107 G C - - MP 36 35 6 40 6 3 32 126 177 -8.968 -8.907 -0.023 -7.684 -7.964 -8.359 -3.445 -1.034 -3.503 0.970 -3.817 -4.057 0.464 -3.830 -3.467 3.172 -3.887 -0.215 0.167 -3.470 -1.450 -2.483 ML 37 35 6 40 6 1 28 124 175 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 27 123 175 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 22 120 171 -9.448 -8.147 -3.944 -4.626 -4.643 -0.235 IL 40 40 5 40 6 1 29 125 176 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 30 125 176 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 106 C G - - MP 42 41 6 46 6 3 30 124 175 -8.968 -8.907 -0.023 -7.684 -7.964 -8.359 -3.859 -3.687 -3.657 0.004 -2.550 -4.155 3.259 -3.286 -3.691 0.380 -4.018 -1.627 1.021 -3.968 -0.248 -2.558 ML 43 41 6 46 6 1 27 122 173 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 26 121 173 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 22 118 170 -9.448 -8.147 -3.944 -4.626 -4.643 -0.235 IL 46 46 5 46 6 1 28 123 174 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 28 123 174 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 105 g c - - MP 48 47 6 52 6 3 29 122 173 -8.968 -8.907 -0.023 -7.684 -7.964 -8.359 -3.158 -2.322 -3.224 2.241 -3.402 -4.186 0.896 -3.395 -3.179 2.395 -3.679 0.043 0.551 -3.452 -1.052 -2.123 ML 49 47 6 52 6 1 26 120 171 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 24 120 171 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 22 117 169 -9.448 -8.147 -3.944 -4.626 -4.643 -0.235 IL 52 52 5 52 6 1 27 121 172 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 27 121 172 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 104 g c - - MP 54 53 6 58 4 2 27 120 171 -6.549 -6.756 -0.070 -5.171 -3.051 -2.137 -3.168 1.867 -3.537 -4.268 0.706 -3.331 -3.045 1.953 -3.559 1.948 0.405 -3.492 -1.207 -2.030 ML 55 53 6 58 4 1 25 119 170 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 23 118 169 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 21 117 168 -4.945 -4.626 -1.860 -0.618 IL 58 58 5 58 4 1 26 120 171 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 25 119 171 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - u - - - ML 60 59 6 62 3 1 25 118 169 -7.641 -0.026 -6.295 0.064 -0.685 -1.004 0.875 D 61 59 6 62 3 0 20 116 167 -6.451 -1.964 -0.450 IL 62 62 3 62 3 1 25 118 170 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - u - - - ML 63 62 3 65 3 1 24 117 168 -8.055 -0.023 -6.372 -0.287 -0.700 -0.360 0.836 D 64 62 3 65 3 0 20 115 166 -5.794 -0.908 -1.155 IL 65 65 3 65 3 1 24 117 168 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 103 - a - - MR 66 65 3 68 3 1 23 116 167 -8.055 -0.023 -6.372 0.936 -0.396 -0.920 -0.325 D 67 65 3 68 3 0 18 114 165 -6.626 -1.804 -0.507 IR 68 68 3 68 3 1 23 116 167 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 102 - A - - MR 69 68 3 71 5 1 22 115 166 -6.815 -0.047 -6.631 -6.843 -7.734 1.536 -1.735 -1.430 -1.221 D 70 68 3 71 5 0 17 113 164 -5.489 -0.844 -2.279 -4.546 -2.541 IR 71 71 3 71 5 1 21 115 166 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 101 u a - - MP 72 71 3 76 6 2 22 114 165 -8.983 -8.922 -0.023 -7.699 -7.979 -8.374 -3.596 -3.387 -3.494 0.268 -2.577 -4.109 1.734 -3.225 -3.508 0.641 -3.908 -1.300 2.936 -3.764 -0.268 -2.382 ML 73 71 3 76 6 1 18 112 163 -6.420 -6.766 -1.480 -0.852 -6.616 -4.145 0.160 -0.368 -0.425 0.447 MR 74 71 3 76 6 1 18 112 163 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 14 109 160 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 20 113 164 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 20 113 164 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 100 c g - - MP 78 77 6 82 6 2 20 112 163 -8.983 -8.922 -0.023 -7.699 -7.979 -8.374 -2.888 -2.800 -2.928 0.706 -2.285 -3.637 2.599 -2.855 -2.951 1.034 -3.420 -0.898 1.403 -3.103 0.368 -0.693 ML 79 77 6 82 6 1 17 110 161 -6.420 -6.766 -1.480 -0.852 -6.616 -4.145 0.168 0.082 -0.503 0.153 MR 80 77 6 82 6 1 16 110 161 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 14 108 159 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 18 111 162 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 18 111 162 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 99 g u - - MP 84 83 6 88 4 2 18 110 161 -6.596 -6.803 -0.068 -5.217 -3.099 -2.148 -3.221 1.821 -3.633 -4.347 0.623 -3.376 -3.078 1.908 -3.592 2.109 0.324 -3.568 -1.291 -2.068 ML 85 83 6 88 4 1 16 109 160 -3.886 -4.069 -0.456 -2.798 0.272 -0.609 0.285 -0.124 MR 86 83 6 88 4 1 15 108 160 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 13 107 158 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 17 110 161 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 17 109 161 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - u - - - ML 90 89 6 92 3 1 16 108 159 -8.092 -0.022 -6.410 -0.232 -0.770 0.140 0.546 D 91 89 6 92 3 0 13 106 157 -5.620 -0.734 -1.403 IL 92 92 3 92 3 1 16 108 159 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 98 - a - - MR 93 92 3 95 3 1 15 107 158 -8.092 -0.158 -3.325 0.551 0.167 -0.935 -0.170 D 94 92 3 95 3 0 11 105 156 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 16 107 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 97 - u - - MR 96 95 3 98 3 1 16 106 157 -7.959 -0.025 -6.277 0.021 -0.027 -0.902 0.554 D 97 95 3 98 3 0 10 104 155 -7.078 -2.256 -0.352 IR 98 98 3 98 3 1 15 106 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 96 - U - - MR 99 98 3 101 5 1 16 105 156 -6.728 -0.130 -3.999 -6.755 -7.647 -0.747 -0.886 -1.428 1.317 D 100 98 3 101 5 0 10 103 155 -5.777 -0.491 -3.404 -4.835 -2.829 IR 101 101 3 101 5 1 14 105 156 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 95 u a - - MP 102 101 3 106 6 2 18 104 155 -8.968 -8.907 -0.023 -7.684 -7.964 -8.359 -3.535 -3.319 -3.439 0.330 -2.537 -4.057 1.771 -3.179 -3.453 0.721 -3.855 -1.232 2.877 -3.704 -0.230 -2.332 ML 103 101 3 106 6 1 12 102 153 -6.574 -6.920 -0.934 -1.329 -6.770 -4.299 0.015 -0.403 -0.584 0.647 MR 104 101 3 106 6 1 11 102 153 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 7 98 149 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 13 103 155 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 13 103 154 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 94 u a - - MP 108 107 6 112 6 2 17 102 153 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.658 -3.455 -3.551 0.206 -2.617 -4.161 1.696 -3.271 -3.563 0.562 -3.961 -1.368 2.991 -3.825 -0.307 -2.433 ML 109 107 6 112 6 1 11 100 151 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 11 100 151 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 6 96 147 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 12 101 153 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 13 101 152 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 93 u a - - MP 114 113 6 118 6 2 16 100 151 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.658 -3.455 -3.551 0.206 -2.617 -4.161 1.696 -3.271 -3.563 0.562 -3.961 -1.368 2.991 -3.825 -0.307 -2.433 ML 115 113 6 118 6 1 10 98 149 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 10 98 149 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 6 94 146 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 12 99 151 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 12 99 150 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 92 G C - - MP 120 119 6 124 6 2 15 98 149 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -4.195 -2.838 -4.260 0.550 -4.463 -4.467 0.042 -4.451 -3.948 3.473 -4.328 -0.523 -0.361 -4.104 -1.969 -3.146 ML 121 119 6 124 6 1 10 96 147 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 10 96 147 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 6 92 144 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 11 97 149 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 12 97 148 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 91 u a - - MP 126 125 6 130 6 2 14 96 147 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.263 -3.190 -3.218 0.420 -2.365 -3.857 1.913 -3.012 -3.244 0.729 -3.672 -1.239 2.547 -3.438 0.818 -2.157 ML 127 125 6 130 6 1 9 94 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 9 94 145 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 6 91 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 11 95 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 11 95 146 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 90 G C - - MP 132 131 6 136 6 2 12 94 145 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -4.195 -2.838 -4.260 0.550 -4.463 -4.467 0.042 -4.451 -3.948 3.473 -4.328 -0.523 -0.361 -4.104 -1.969 -3.146 ML 133 131 6 136 6 1 9 93 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 8 92 143 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 5 90 141 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 10 93 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 10 93 144 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 89 a u - - MP 138 137 6 142 4 2 10 92 143 -6.640 -6.847 -0.066 -5.262 -3.372 -2.520 -3.415 2.963 -3.548 -4.584 0.728 -3.479 -3.330 1.538 -3.856 -0.073 0.307 -3.839 -1.217 -2.279 ML 139 137 6 142 4 1 8 91 142 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 6 91 142 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 5 89 141 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 9 92 143 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 9 92 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - C - - - ML 144 143 6 146 3 1 9 90 141 -8.092 -0.022 -6.410 -1.084 1.385 -1.876 -0.635 D 145 143 6 146 3 0 4 88 140 -5.620 -0.734 -1.403 IL 146 146 3 146 3 1 8 90 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 88 - A - - MR 147 146 3 149 5 1 8 89 140 -6.850 -0.046 -6.665 -6.877 -7.769 1.564 -1.812 -1.500 -1.305 D 148 146 3 149 5 0 3 87 139 -5.352 -0.707 -2.978 -4.409 -2.404 IR 149 149 3 149 5 1 6 89 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 87 C G - - MP 150 149 3 154 6 2 8 88 139 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -4.002 -3.850 -3.779 -0.141 -2.631 -4.260 3.336 -3.384 -3.815 0.199 -4.129 -1.792 0.930 -4.103 -0.330 -2.676 ML 151 149 3 154 6 1 4 87 138 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 3 154 6 1 3 86 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 3 154 6 0 1 84 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 5 87 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 5 87 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 86 G C - - MP 156 155 6 160 4 2 6 86 137 -6.640 -6.847 -0.066 -5.262 -3.844 -2.629 -3.903 0.826 -4.302 -4.368 0.176 -4.181 -3.739 3.316 -4.150 0.207 -0.142 -3.846 -1.810 -2.805 ML 157 155 6 160 4 1 4 85 136 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 4 1 2 84 136 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 159 155 6 160 4 0 1 83 135 -4.568 -4.250 -2.265 -0.520 IL 160 160 5 160 4 1 5 86 137 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 161 161 6 161 3 1 5 86 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - a - - - ML 162 161 6 164 5 1 5 84 135 -6.850 -0.046 -6.665 -6.877 -7.769 0.982 -0.930 -0.963 -0.019 D 163 161 6 164 5 0 1 82 134 -4.959 -0.803 -4.221 -2.596 -2.508 IL 164 164 3 164 5 1 3 84 135 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 85 C G - - MP 165 164 3 169 6 2 5 83 134 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.591 -3.589 -3.522 0.007 -0.915 -4.125 3.234 -3.300 -3.560 0.217 -3.957 -1.697 0.992 -3.771 -0.358 -2.488 ML 166 164 3 169 6 1 2 82 133 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 3 169 6 1 2 81 132 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 3 169 6 0 0 79 130 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 3 82 134 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 3 82 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 29 84 a u - - MP 171 170 6 175 4 2 4 81 132 -6.640 -6.847 -0.066 -5.262 -2.599 -2.311 -0.558 2.515 -2.727 -3.609 1.087 -2.950 -2.772 1.536 -3.301 -0.299 0.798 -2.888 -0.666 -1.803 ML 172 170 6 175 4 1 1 80 131 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 79 131 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 78 130 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 2 81 132 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 2 81 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 30 - C - - - ML 177 176 6 179 3 1 3 79 130 -7.681 -0.025 -6.335 -1.084 1.385 -1.876 -0.635 D 178 176 6 179 3 0 0 77 128 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 2 80 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 31 - U - - - ML 180 179 3 182 3 1 2 78 129 -8.092 -0.022 -6.410 -0.984 -1.074 -1.686 1.438 D 181 179 3 182 3 0 0 76 128 -5.620 -0.734 -1.403 IL 182 182 3 182 3 1 1 78 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 83 - U - - MR 183 182 3 185 3 1 2 77 128 -8.092 -0.022 -6.410 -0.984 -1.074 -1.686 1.438 D 184 182 3 185 3 0 0 75 126 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 1 77 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 82 - U - - MR 186 185 3 188 5 1 1 76 127 -6.850 -0.046 -6.665 -6.877 -7.769 -0.984 -1.074 -1.686 1.438 D 187 185 3 188 5 0 0 74 126 -5.352 -0.707 -2.978 -4.409 -2.404 IR 188 188 3 188 5 1 1 76 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 32 81 a u - - MP 189 188 3 193 6 2 2 75 126 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.372 -2.520 -3.415 2.963 -3.548 -4.584 0.728 -3.479 -3.330 1.538 -3.856 -0.073 0.307 -3.839 -1.217 -2.279 ML 190 188 3 193 6 1 1 73 124 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 73 124 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 69 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 74 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 74 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 33 80 a u - - MP 195 194 6 199 6 2 2 73 124 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.372 -2.520 -3.415 2.963 -3.548 -4.584 0.728 -3.479 -3.330 1.538 -3.856 -0.073 0.307 -3.839 -1.217 -2.279 ML 196 194 6 199 6 1 1 71 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 71 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 67 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 72 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 72 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 34 79 C G - - MP 201 200 6 205 6 2 2 71 122 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -4.002 -3.850 -3.779 -0.141 -2.631 -4.260 3.336 -3.384 -3.815 0.199 -4.129 -1.792 0.930 -4.103 -0.330 -2.676 ML 202 200 6 205 6 1 1 69 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 69 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 65 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 70 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 70 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 35 78 G C - - MP 207 206 6 211 6 2 2 69 120 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -4.195 -2.838 -4.260 0.550 -4.463 -4.467 0.042 -4.451 -3.948 3.473 -4.328 -0.523 -0.361 -4.104 -1.969 -3.146 ML 208 206 6 211 6 1 1 67 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 67 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 63 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 68 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 68 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 36 77 g u - - MP 213 212 6 217 6 2 2 67 118 -8.998 -8.937 -0.023 -7.714 -7.993 -8.388 -3.279 -2.200 -3.413 1.315 -3.851 -4.601 0.472 -3.489 -3.180 1.808 -3.687 2.607 0.110 -3.864 -1.466 -2.196 ML 214 212 6 217 6 1 1 65 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 65 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 61 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 66 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 66 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 37 76 G C - - MP 219 218 6 223 6 2 2 65 116 -8.998 -8.937 -0.055 -5.221 -7.993 -8.388 -4.195 -2.838 -4.260 0.550 -4.463 -4.467 0.042 -4.451 -3.948 3.473 -4.328 -0.523 -0.361 -4.104 -1.969 -3.146 ML 220 218 6 223 6 1 1 63 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 6 1 1 63 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 222 218 6 223 6 0 0 60 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 223 223 5 223 6 1 1 64 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 224 224 6 224 5 1 1 64 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 38 75 u a - - MP 225 224 6 229 6 2 2 63 114 -8.966 -8.905 -0.023 -7.681 -7.961 -8.356 -3.307 -3.173 -3.218 0.481 -2.295 -3.820 2.325 -2.961 -3.247 0.859 -3.649 -1.161 2.350 -3.454 0.010 -2.138 ML 226 224 6 229 6 1 1 62 113 -6.597 -6.943 -1.657 -0.724 -6.793 -4.322 -0.004 -0.410 -0.605 0.672 MR 227 224 6 229 6 1 1 61 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 228 224 6 229 6 0 0 59 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 229 229 5 229 6 1 1 62 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 230 230 6 230 5 1 1 62 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 39 74 a u - - MP 231 230 6 235 4 2 2 61 112 -6.541 -3.166 -0.235 -5.163 -3.270 -2.448 -3.316 2.823 -3.395 -4.429 0.878 -3.382 -3.237 1.658 -3.757 -0.024 0.453 -3.703 -1.069 -2.188 ML 232 230 6 235 4 1 1 60 112 -4.024 -2.168 -0.773 -2.936 0.866 -0.742 -0.472 -0.220 MR 233 230 6 235 4 1 1 59 111 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 234 230 6 235 4 0 0 58 109 -4.568 -4.250 -2.265 -0.520 IL 235 235 5 235 4 1 1 61 112 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 236 236 6 236 3 1 1 61 112 -1.263 -0.870 -4.789 0.000 0.000 0.000 0.000 [ MATL 49 ] 40 - a - - - ML 237 236 6 239 3 1 1 59 110 -7.681 -0.025 -6.335 0.448 -0.994 0.394 -0.286 D 238 236 6 239 3 0 0 57 108 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 60 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 41 - U - - - ML 240 239 3 242 3 1 1 58 109 -7.681 -0.318 -2.375 -0.984 -1.074 -1.686 1.438 D 241 239 3 242 3 0 0 56 107 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 59 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 42 - u - - - ML 243 242 3 245 3 1 1 57 109 -2.729 -0.262 -6.048 -0.061 -0.577 -0.892 0.873 D 244 242 3 245 3 0 0 54 106 -7.419 -1.686 -0.549 IL 245 245 3 245 3 1 1 58 109 -1.149 -1.189 -3.180 0.000 0.000 0.000 0.000 [ MATL 52 ] 46 - G - - - ML 246 245 3 248 3 1 1 56 107 -7.386 -0.031 -6.040 -0.406 -1.394 1.194 -0.792 D 247 245 3 248 3 0 0 53 105 -7.441 -1.640 -0.571 IL 248 248 3 248 3 1 1 57 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 47 - g - - - ML 249 248 3 251 3 1 1 55 106 -7.490 -0.029 -6.144 -0.149 -0.785 0.431 0.226 D 250 248 3 251 3 0 0 52 104 -7.134 -2.647 -0.263 IL 251 251 3 251 3 1 1 56 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 48 - u - - - ML 252 251 3 254 3 1 1 54 105 -7.490 -0.029 -6.144 -0.109 -0.289 -0.272 0.512 D 253 251 3 254 3 0 0 52 103 -7.134 -1.878 -0.472 IL 254 254 3 254 3 1 1 55 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 49 - u - - - ML 255 254 3 257 3 1 1 53 104 -7.536 -0.028 -6.190 -0.417 -0.070 -1.135 0.882 D 256 254 3 257 3 0 0 51 103 -6.962 -0.736 -1.353 IL 257 257 3 257 3 1 1 54 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 50 - a - - - ML 258 257 3 260 3 1 1 52 103 -7.681 -0.025 -6.335 0.485 -0.986 0.346 -0.279 D 259 257 3 260 3 0 0 50 101 -6.174 -1.687 -0.566 IL 260 260 3 260 3 1 1 53 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 51 - u - - - ML 261 260 3 263 3 1 1 51 102 -7.681 -0.025 -6.335 0.169 -0.591 0.105 0.185 D 262 260 3 263 3 0 0 49 100 -6.174 -1.687 -0.566 IL 263 263 3 263 3 1 1 52 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 52 - c - - - ML 264 263 3 266 3 1 1 50 101 -7.681 -0.117 -3.774 -0.516 0.590 -1.277 0.467 D 265 263 3 266 3 0 0 48 99 -6.174 -1.687 -0.566 IL 266 266 3 266 3 1 1 51 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 53 - c - - - ML 267 266 3 269 3 1 1 49 100 -7.591 -0.027 -6.245 0.215 0.485 -0.975 -0.103 D 268 266 3 269 3 0 0 46 98 -6.722 -0.921 -1.113 IL 269 269 3 269 3 1 1 50 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 54 - u - - - ML 270 269 3 272 3 1 1 48 99 -2.714 -0.549 -2.608 0.215 -0.749 0.054 0.270 D 271 269 3 272 3 0 0 40 92 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 52 104 -0.518 -1.822 -5.741 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - u - - - ML 273 272 3 275 3 1 1 20 39 -7.444 -0.030 -6.098 0.087 -0.076 -0.181 0.146 D 274 272 3 275 3 0 0 19 38 -7.280 -0.557 -1.672 IL 275 275 3 275 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - c - - - ML 276 275 3 278 3 1 1 19 38 -7.681 -0.025 -6.335 -0.180 0.702 -1.147 0.056 D 277 275 3 278 3 0 0 18 37 -6.174 -1.687 -0.566 IL 278 278 3 278 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - a - - - ML 279 278 3 281 3 1 1 18 36 -7.681 -0.025 -6.335 0.650 -0.758 -0.901 0.383 D 280 278 3 281 3 0 0 17 36 -6.174 -1.687 -0.566 IL 281 281 3 281 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - G - - - ML 282 281 3 284 3 1 1 16 35 -7.681 -0.025 -6.335 -0.395 -0.997 1.074 -0.660 D 283 281 3 284 3 0 0 16 34 -6.174 -1.687 -0.566 IL 284 284 3 284 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 68 - G - - - ML 285 284 3 287 3 1 1 15 33 -7.681 -0.025 -6.335 -0.460 -1.282 1.075 -0.405 D 286 284 3 287 3 0 0 15 33 -6.174 -1.687 -0.566 IL 287 287 3 287 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 69 - a - - - ML 288 287 3 290 3 1 1 13 32 -7.681 -0.068 -4.603 0.461 -0.420 -0.550 0.255 D 289 287 3 290 3 0 0 13 32 -6.174 -1.687 -0.566 IL 290 290 3 290 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 70 - U - - - ML 291 290 3 293 2 1 1 1 1 * 0.000 -0.527 -0.187 -1.250 1.005 D 292 290 3 293 2 0 0 0 0 * 0.000 IL 293 293 3 293 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 294 293 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-274 ACC RF00822 DESC microRNA mir-274 LENG 97 MAXL 208 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 18:49:58 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00822/CM NSEQ 13 EFFN 2.421631 CKSUM 349282164 STATS LOCAL MSV -9.2185 0.71882 STATS LOCAL VITERBI -10.2129 0.71882 STATS LOCAL FORWARD -3.4448 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.46938 1.48074 1.37349 1.24050 1.38629 1.38629 1.38629 1.38629 0.30982 3.88942 1.40256 1.46634 0.26236 0.00000 * 1 1.82124 1.51253 2.32941 0.65302 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.05427 3.63387 3.63387 1.46634 0.26236 1.17037 0.37143 2 1.91915 2.53848 0.46718 1.91382 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.04975 3.71867 3.71867 1.46634 0.26236 1.29510 0.32003 3 2.53471 1.55634 2.28662 0.49725 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04748 3.76428 3.76428 1.46634 0.26236 1.06373 0.42337 4 1.94001 1.79952 0.77333 1.47209 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 5 1.64038 1.27486 1.72661 1.05344 5 u - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 6 1.96293 1.59918 1.30478 0.95125 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 7 1.90324 2.74104 0.33835 2.61093 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 8 3.05274 0.27577 2.81945 2.00882 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 9 0.91962 2.35189 0.91772 2.23761 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 10 1.25977 2.64848 0.57631 2.48224 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 0.85145 0.55651 11 1.40659 2.04064 2.30048 0.64461 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04346 3.85068 3.85068 1.46634 0.26236 1.58051 0.23051 12 1.77721 2.05396 1.66661 0.66596 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.04346 3.85068 3.85068 1.46634 0.26236 0.53059 0.88736 13 2.90995 1.86656 2.66512 0.32673 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 14 2.22513 0.78003 1.99501 1.21221 14 c - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 15 1.32354 2.77056 0.51670 2.59433 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 16 1.70720 2.08895 1.19989 0.93247 16 u - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 17 2.64911 1.79581 2.50772 0.38296 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 18 2.88077 1.92694 2.70663 0.31258 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 19 2.94196 1.93088 2.73553 0.30468 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 20 2.58579 3.25005 0.16934 3.17801 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 21 2.53432 1.52200 2.30935 0.50570 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 22 2.60055 3.26777 0.16604 3.20240 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 23 0.32754 2.81462 1.86459 2.74241 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 24 2.89314 0.19220 3.46942 2.42677 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 25 3.23130 0.23140 3.01285 2.13775 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 26 2.29908 3.01820 0.22880 2.89542 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 27 0.58888 2.21890 2.26706 1.45798 27 A - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 28 3.00700 0.27390 2.81266 2.03939 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 29 0.55106 2.22666 1.64712 2.09418 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 30 2.89314 0.19220 3.46942 2.42677 30 C - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 31 2.64617 2.60398 3.16502 0.20716 31 U - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 32 0.32653 2.81862 1.86534 2.74813 32 A - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 33 0.32634 2.81938 1.86549 2.74923 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 34 3.23625 0.23088 3.01524 2.13862 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 35 2.61015 3.27934 0.16393 3.21841 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 36 1.93683 2.93838 0.29781 2.80599 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 37 2.60920 3.27819 0.16413 3.21682 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 38 2.42765 1.09613 2.20311 0.76114 38 u - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 39 0.40792 2.59200 1.71924 2.51463 39 A - - < 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 40 1.06333 2.25340 0.99504 1.71511 40 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 41 2.64617 2.60398 3.16502 0.20716 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.33903 3.88942 1.32020 1.46634 0.26236 1.09861 0.40547 42 1.56083 1.92624 2.21657 0.62481 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.31448 1.41602 3.60622 0.76206 0.62868 1.15418 0.37880 43 2.10129 2.88066 0.30700 2.45398 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05055 3.70313 3.70313 1.46634 0.26236 2.42554 0.09259 44 1.63282 2.08398 0.94713 1.22985 47 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05055 3.70313 3.70313 1.46634 0.26236 2.42554 0.09259 45 1.56160 1.59558 1.54198 0.98496 48 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05055 3.70313 3.70313 1.46634 0.26236 1.35296 0.29905 46 1.89935 1.41782 2.41982 0.65556 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04821 3.74943 3.74943 1.46634 0.26236 0.23965 1.54601 47 1.02887 2.24471 1.03484 1.70734 50 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 48 1.30506 1.86409 1.21512 1.28326 51 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 49 2.01714 0.81142 2.58278 1.05792 52 c - - _ 1.38629 1.38629 1.38629 1.38629 0.13234 3.88942 2.26815 1.46634 0.26236 1.09861 0.40547 50 1.26607 0.87052 2.28982 1.61927 53 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80272 3.80272 1.46634 0.26236 0.33311 1.26122 51 1.25399 2.02709 1.27515 1.19228 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.59767 1.50434 1.47953 1.95206 0.15313 1.09861 0.40547 52 1.37814 1.38744 1.45187 1.33139 64 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05299 3.65712 3.65712 1.46634 0.26236 0.16522 1.88196 53 1.66078 0.71150 2.45769 1.45470 65 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 54 0.86416 2.05922 2.17626 1.08596 66 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 55 2.00131 2.28529 0.42003 2.24363 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 56 2.03794 2.63956 0.43570 1.88718 68 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 57 1.02354 1.70347 1.80879 1.22154 69 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 58 2.02920 1.53673 2.55175 0.55246 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.22726 1.69922 3.88942 0.65587 0.73186 1.09861 0.40547 59 2.76819 1.98918 2.41613 0.34087 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.13200 3.88942 2.27106 1.46634 0.26236 1.09861 0.40547 60 0.87479 2.37023 0.96043 2.23624 75 a - - > 1.38629 1.38629 1.38629 1.38629 0.04563 3.80305 3.80305 1.46634 0.26236 0.33393 1.25914 61 3.41767 0.19442 3.11390 2.30788 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 62 3.01626 1.94023 2.73658 0.29766 77 U - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 63 3.42256 0.19400 3.11608 2.30881 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 64 2.41829 3.18496 0.19888 2.99770 79 G - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 65 2.98212 2.16485 2.63316 0.27089 80 U - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 66 2.98601 2.16534 2.63464 0.27042 81 U - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 67 2.64617 2.60398 3.16502 0.20716 82 U - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 68 2.64617 2.60398 3.16502 0.20716 83 U - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 69 2.31784 1.85492 1.63061 0.59922 84 U - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 70 1.99834 2.96946 0.28650 2.77709 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 71 3.12358 0.31499 2.84320 1.78400 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 72 2.42129 3.18910 0.19805 3.00267 87 G - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 73 0.14860 3.27787 2.99818 2.98572 88 A - - - 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 74 2.96646 2.16289 2.62715 0.27281 89 U - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 75 3.40422 0.19560 3.10790 2.30531 90 C - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 76 0.74939 2.47812 1.06490 2.31588 91 a - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 77 3.40320 0.19569 3.10744 2.30511 92 C - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 78 0.33704 2.94781 1.77152 2.75528 93 A - - > 1.38629 1.38629 1.38629 1.38629 0.04178 3.88942 3.88942 1.46634 0.26236 1.09861 0.40547 79 0.33701 2.94794 1.77153 2.75544 94 A - - > 1.38629 1.38629 1.38629 1.38629 0.12508 3.88942 2.33184 1.46634 0.26236 1.09861 0.40547 80 0.40776 2.74293 1.63741 2.57703 95 A - - > 1.38629 1.38629 1.38629 1.38629 0.20553 3.80966 1.81015 1.46634 0.26236 0.35157 1.21600 81 2.37541 2.38008 2.88180 0.27648 96 U - - - 1.38629 1.38629 1.38629 1.38629 0.04821 3.74943 3.74943 1.46634 0.26236 2.23916 0.11266 82 1.42559 1.34528 2.15355 0.95948 97 u - - - 1.38629 1.38629 1.38629 1.38629 0.04821 3.74943 3.74943 1.46634 0.26236 0.23965 1.54601 83 0.93653 1.15609 2.24242 1.67613 98 a - - - 1.38629 1.38629 1.38629 1.38629 0.08220 3.88942 2.83949 1.46634 0.26236 1.09861 0.40547 84 2.80791 1.74262 2.56848 0.37403 99 U - - > 1.38629 1.38629 1.38629 1.38629 0.04346 3.85068 3.85068 1.46634 0.26236 1.58051 0.23051 85 1.73929 2.15980 0.62298 1.75641 100 G - - > 1.38629 1.38629 1.38629 1.38629 0.04346 3.85068 3.85068 1.46634 0.26236 1.58051 0.23051 86 0.36833 2.85447 1.70525 2.67664 101 A - - > 1.38629 1.38629 1.38629 1.38629 0.04346 3.85068 3.85068 1.46634 0.26236 1.58051 0.23051 87 0.16224 3.19693 2.92517 2.89644 102 A - - - 1.38629 1.38629 1.38629 1.38629 0.04346 3.85068 3.85068 1.46634 0.26236 1.58051 0.23051 88 0.60750 1.66707 2.24482 1.82918 103 A - - - 1.38629 1.38629 1.38629 1.38629 0.08593 3.85068 2.79562 1.46634 0.26236 1.58051 0.23051 89 2.69258 1.66592 2.44896 0.42023 104 U - - > 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 90 2.46449 1.05216 2.16440 0.79641 105 u - - > 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 91 2.28266 2.98730 0.23848 2.81770 106 G - - > 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 92 2.83911 0.34267 2.56058 1.86828 107 C - - > 1.38629 1.38629 1.38629 1.38629 0.04531 3.81005 3.81005 1.46634 0.26236 1.90651 0.16087 93 1.06455 1.77992 1.42855 1.39914 108 a - - > 1.38629 1.38629 1.38629 1.38629 0.09325 3.81005 2.70476 1.46634 0.26236 1.90651 0.16087 94 1.55478 1.88313 0.88995 1.48734 109 g - - > 1.38629 1.38629 1.38629 1.38629 0.04748 3.76428 3.76428 1.46634 0.26236 2.16902 0.12137 95 2.02815 0.85435 1.34644 1.69994 110 c - - > 1.38629 1.38629 1.38629 1.38629 0.04748 3.76428 3.76428 1.46634 0.26236 2.16902 0.12137 96 0.61844 2.45831 1.28050 2.32547 111 A - - > 1.38629 1.38629 1.38629 1.38629 0.04748 3.76428 3.76428 1.46634 0.26236 2.16902 0.12137 97 0.70251 1.56509 2.15748 1.71495 112 a - - : 1.38629 1.38629 1.38629 1.38629 0.02402 3.74082 * 1.46634 0.26236 0.00000 * //