INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-288 ACC RF00787 DESC mir-288 microRNA precursor family STATES 292 NODES 67 CLEN 96 W 114 ALPH RNA RF no CONS yes MAP yes DATE Sun Oct 31 22:55:47 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.7/updates/GO_terms/RF00787/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 12 EFFN 0.887695 CKSUM 3953006746 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 68.30 NC 36.70 EFP7GF -7.0015 0.71873 ECMLC 0.62673 -5.30242 3.41213 1600000 282592 0.004246 ECMGC 0.41698 -15.29532 -2.95610 1600000 68645 0.005827 ECMLI 0.61756 -3.04339 5.27769 1600000 204600 0.005865 ECMGI 0.47121 -8.42466 1.49746 1600000 42912 0.009321 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 114 134 -6.407 -7.652 -0.193 -3.205 IL 1 1 2 1 4 2 40 115 136 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 41 116 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 98 - G - - MR 3 2 3 5 5 3 41 114 135 -6.635 -0.095 -6.451 -4.754 -7.555 -0.478 -1.483 1.251 -0.877 D 4 2 3 5 5 0 36 112 133 -5.568 -0.749 -3.195 -3.159 -2.620 IR 5 5 3 5 5 2 40 114 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 97 G C - - MP 6 5 3 10 6 4 41 113 134 -8.907 -8.846 -0.024 -7.622 -7.902 -8.297 -3.310 -1.454 -3.380 1.051 -3.582 -3.990 0.692 -3.648 -3.327 3.077 -3.767 -0.149 0.373 -3.392 -1.237 -2.346 ML 7 5 3 10 6 1 37 111 132 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 36 111 132 -7.248 -5.977 -1.886 -5.955 -0.655 -4.169 0.057 0.280 -0.632 0.138 D 9 5 3 10 6 0 31 109 130 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 38 112 133 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 2 39 112 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 96 G C - - MP 12 11 6 16 6 4 40 111 132 -8.907 -8.846 -0.024 -7.622 -7.902 -8.297 -3.711 -2.615 -3.765 0.843 -3.780 -4.238 0.627 -3.890 -3.572 3.237 -3.992 -0.301 0.198 -3.772 -1.368 -2.657 ML 13 11 6 16 6 1 36 109 130 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 35 109 130 -7.248 -5.977 -1.886 -5.955 -0.655 -4.169 0.057 0.280 -0.632 0.138 D 15 11 6 16 6 0 31 107 128 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 37 111 131 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 37 110 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 95 c g - - MP 18 17 6 22 6 4 38 109 130 -8.907 -8.846 -0.024 -7.622 -7.902 -8.297 -2.579 -2.519 -1.652 0.903 -2.166 -3.395 2.288 -2.686 -2.698 1.279 -3.188 -0.682 1.449 -2.807 0.695 -1.698 ML 19 17 6 22 6 1 35 108 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 33 108 128 -7.248 -5.977 -1.198 -5.955 -1.089 -4.169 0.166 -0.709 0.476 -0.191 D 21 17 6 22 6 0 30 106 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 36 109 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 36 108 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 94 C G - - MP 24 23 6 28 4 2 36 107 128 -6.442 -6.649 -0.076 -5.063 -3.704 -3.506 -3.524 0.164 -2.466 -4.041 3.160 -3.182 -3.557 0.589 -3.896 -1.441 1.116 -3.820 -0.164 -2.430 ML 25 23 6 28 4 1 34 107 128 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 31 106 127 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 30 105 126 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 35 108 129 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 35 107 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 30 29 6 32 3 1 34 105 125 -7.927 -0.025 -6.244 0.942 -1.056 -0.180 -0.482 D 31 29 6 32 3 0 29 103 124 -5.620 -0.734 -1.403 IL 32 32 3 32 3 1 33 105 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 93 - C - - MR 33 32 3 35 5 1 34 104 124 -6.698 -0.052 -6.513 -6.726 -7.617 -0.715 1.168 -1.479 -0.348 D 34 32 3 35 5 0 27 102 123 -5.352 -0.707 -2.978 -4.409 -2.404 IR 35 35 3 35 5 1 31 104 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 92 u a - - MP 36 35 3 40 6 2 34 103 123 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -2.294 -2.363 -2.430 0.915 -1.115 -3.240 1.792 -2.568 -1.700 1.064 -3.006 -0.690 2.232 -2.581 -0.030 -1.537 ML 37 35 3 40 6 1 28 101 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 28 101 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 23 98 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 30 102 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 31 102 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 91 G C - - MP 42 41 6 46 6 2 33 101 121 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.861 -2.684 -3.917 0.753 -3.992 -4.312 0.443 -4.065 -3.692 3.324 -4.100 -0.368 0.024 -3.875 -1.556 -2.807 ML 43 41 6 46 6 1 28 99 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 27 99 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 22 96 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 29 100 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 30 100 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 90 u a - - MP 48 47 6 52 6 2 31 99 119 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.412 -3.175 -3.324 0.461 -2.457 -3.951 1.846 -3.087 -3.342 0.897 -3.747 -1.086 2.735 -3.580 -0.153 -2.228 ML 49 47 6 52 6 1 27 97 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 26 97 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 22 94 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 28 98 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 28 98 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 89 C G - - MP 54 53 6 58 6 2 29 97 117 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.704 -3.506 -3.524 0.164 -2.466 -4.041 3.160 -3.182 -3.557 0.589 -3.896 -1.441 1.116 -3.820 -0.164 -2.430 ML 55 53 6 58 6 1 26 95 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 25 95 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 21 93 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 27 96 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 27 96 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 88 g c - - MP 60 59 6 64 6 2 27 95 115 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -2.602 -1.934 -2.770 1.307 -2.855 -3.519 1.143 -2.963 -2.690 2.016 -1.747 1.618 0.827 -2.902 -0.686 -1.759 ML 61 59 6 64 6 1 25 94 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 23 93 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 21 91 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 26 94 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 26 94 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 87 u a - - MP 66 65 6 70 4 2 25 93 113 -6.442 -6.649 -0.076 -5.063 -3.412 -3.175 -3.324 0.461 -2.457 -3.951 1.846 -3.087 -3.342 0.897 -3.747 -1.086 2.735 -3.580 -0.153 -2.228 ML 67 65 6 70 4 1 23 93 113 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 22 92 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 20 91 112 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 25 94 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 24 93 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - A - - - ML 72 71 6 74 3 1 24 90 111 -7.501 -0.028 -6.155 1.424 -1.476 -1.195 -0.945 D 73 71 6 74 3 0 19 89 109 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 23 92 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - A - - - ML 75 74 3 77 3 1 23 89 110 -7.501 -0.028 -6.155 1.424 -1.476 -1.195 -0.945 D 76 74 3 77 3 0 19 88 108 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 23 91 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - U - - - ML 78 77 3 80 3 1 22 88 108 -7.501 -0.028 -6.155 -0.691 -0.843 -1.366 1.284 D 79 77 3 80 3 0 18 87 107 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 22 90 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 81 80 3 83 3 1 21 87 107 -7.927 -0.025 -6.244 -0.691 -0.843 -1.366 1.284 D 82 80 3 83 3 0 17 86 106 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 21 88 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 86 - C - - MR 84 83 3 86 3 1 20 86 106 -7.927 -0.025 -6.244 -0.715 1.168 -1.479 -0.348 D 85 83 3 86 3 0 15 84 105 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 20 87 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 85 - U - - MR 87 86 3 89 5 1 19 85 105 -6.698 -0.052 -6.513 -6.726 -7.617 -0.691 -0.843 -1.366 1.284 D 88 86 3 89 5 0 15 84 104 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 18 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 84 a u - - MP 90 89 3 94 6 2 19 84 104 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.183 -2.388 -3.232 2.674 -3.261 -4.297 1.013 -3.296 -3.158 1.766 -3.671 0.015 0.582 -3.588 -0.938 -2.111 ML 91 89 3 94 6 1 16 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 14 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 11 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 17 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 17 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 83 g u - - MP 96 95 6 100 4 2 17 82 102 -6.442 -6.649 -0.076 -5.063 -3.107 -2.135 -3.222 1.385 -3.512 -4.296 0.774 -3.324 -3.051 2.033 -3.554 2.198 0.410 -3.578 -1.161 -2.054 ML 97 95 6 100 4 1 14 82 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 12 82 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 11 81 101 -4.568 -4.250 -2.265 -0.520 IL 100 100 5 100 4 1 16 83 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 15 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - C - - - ML 102 101 6 104 3 1 15 80 100 -7.927 -0.025 -6.244 -0.715 1.168 -1.479 -0.348 D 103 101 6 104 3 0 10 78 99 -5.620 -0.734 -1.403 IL 104 104 3 104 3 1 14 80 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 82 - A - - MR 105 104 3 107 5 1 15 79 99 -6.698 -0.052 -6.513 -6.726 -7.617 1.424 -1.476 -1.195 -0.945 D 106 104 3 107 5 0 8 77 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 107 107 3 107 5 1 12 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 81 g c - - MP 108 107 3 112 6 2 14 78 98 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -2.188 -0.655 -2.338 1.262 -2.418 -3.068 1.229 -2.676 -2.403 2.286 -2.886 -0.055 1.007 -1.092 -0.428 -1.490 ML 109 107 3 112 6 1 9 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 8 76 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 4 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 11 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 11 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 80 g u - - MP 114 113 6 118 6 2 13 76 96 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.107 -2.135 -3.222 1.385 -3.512 -4.296 0.774 -3.324 -3.051 2.033 -3.554 2.198 0.410 -3.578 -1.161 -2.054 ML 115 113 6 118 6 1 9 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 7 74 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 4 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 10 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 10 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 79 a u - - MP 120 119 6 124 6 2 11 74 94 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -2.157 -1.975 -2.314 1.673 -2.260 -3.120 1.481 -1.807 -2.355 1.666 -2.871 0.247 1.218 -2.435 -0.246 -0.546 ML 121 119 6 124 6 1 8 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 6 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 3 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 9 73 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 9 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 78 g u - - MP 126 125 6 130 4 2 9 72 92 -6.442 -6.649 -0.076 -5.063 -3.107 -2.135 -3.222 1.385 -3.512 -4.296 0.774 -3.324 -3.051 2.033 -3.554 2.198 0.410 -3.578 -1.161 -2.054 ML 127 125 6 130 4 1 6 72 92 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 4 71 92 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 3 70 91 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 8 73 93 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 8 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 24 - c - - - ML 132 131 6 134 3 1 7 69 89 -7.501 -0.028 -6.155 -0.478 0.824 -1.233 0.120 D 133 131 6 134 3 0 2 68 88 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 7 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - A - - - ML 135 134 3 137 3 1 7 68 88 -7.501 -0.028 -6.155 1.203 -1.116 -0.990 -0.448 D 136 134 3 137 3 0 2 67 87 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 6 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 26 - c - - - ML 138 137 3 140 3 1 6 67 87 -7.501 -0.028 -6.155 -0.347 0.810 -0.880 -0.125 D 139 137 3 140 3 0 1 66 86 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 5 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - a - - - ML 141 140 3 143 3 1 5 66 86 -7.927 -0.025 -6.244 0.749 -1.022 0.121 -0.434 D 142 140 3 143 3 0 1 65 85 -5.620 -0.734 -1.403 IL 143 143 3 143 3 1 4 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 77 - A - - MR 144 143 3 146 3 1 5 65 85 -7.927 -0.025 -6.244 1.424 -1.476 -1.195 -0.945 D 145 143 3 146 3 0 0 63 83 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 3 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 76 - G - - MR 147 146 3 149 3 1 4 64 84 -7.927 -0.025 -6.244 -0.620 -1.658 1.350 -1.048 D 148 146 3 149 3 0 0 63 82 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 3 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 75 - C - - MR 150 149 3 152 5 1 4 63 83 -6.698 -0.052 -6.513 -6.726 -7.617 -0.715 1.168 -1.479 -0.348 D 151 149 3 152 5 0 0 62 82 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 2 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 74 g c - - MP 153 152 3 157 6 2 5 62 82 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -2.986 -2.111 -3.098 1.817 -3.401 -4.160 0.837 -3.260 -2.991 2.037 -3.503 1.757 0.527 -3.397 -1.080 -1.974 ML 154 152 3 157 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 2 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 29 73 C G - - MP 159 158 6 163 6 2 5 60 80 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.237 -3.105 -2.011 0.410 -2.619 -3.943 3.070 -3.200 -3.298 0.820 -3.740 -1.162 1.015 -3.439 -0.403 -2.254 ML 160 158 6 163 6 1 1 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 30 72 g c - - MP 165 164 6 169 6 2 4 58 78 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -2.962 -2.124 -3.068 1.971 -3.350 -4.124 0.874 -3.241 -2.982 2.031 -3.498 1.528 0.567 -3.354 -1.039 -1.958 ML 166 164 6 169 6 1 1 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 31 71 u a - - MP 171 170 6 175 4 2 2 56 76 -6.442 -6.649 -0.076 -5.063 -3.412 -3.175 -3.324 0.461 -2.457 -3.951 1.846 -3.087 -3.342 0.897 -3.747 -1.086 2.735 -3.580 -0.153 -2.228 ML 172 170 6 175 4 1 1 56 76 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 56 76 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 55 75 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 1 58 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 32 - u - - - ML 177 176 6 179 3 1 1 54 73 -4.937 -0.068 -6.244 -0.198 -0.458 -1.005 0.928 D 178 176 6 179 3 0 0 52 72 -5.620 -0.734 -1.403 IL 179 179 3 179 3 1 1 54 74 -2.022 -0.511 -4.260 0.000 0.000 0.000 0.000 [ MATR 40 ] - 70 - C - - MR 180 179 3 182 3 1 1 52 72 -7.927 -0.025 -6.244 -0.715 1.168 -1.479 -0.348 D 181 179 3 182 3 0 0 51 70 -6.390 -1.568 -0.620 IR 182 182 3 182 3 1 1 53 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 69 - U - - MR 183 182 3 185 3 1 1 51 71 -7.927 -0.025 -6.244 -0.691 -0.843 -1.366 1.284 D 184 182 3 185 3 0 0 50 69 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 1 52 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 68 - U - - MR 186 185 3 188 5 1 1 50 70 -6.698 -0.052 -6.513 -6.726 -7.617 -0.691 -0.843 -1.366 1.284 D 187 185 3 188 5 0 0 49 69 -5.352 -0.707 -2.978 -4.409 -2.404 IR 188 188 3 188 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 34 67 g u - - MP 189 188 3 193 6 2 2 49 69 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.107 -2.135 -3.222 1.385 -3.512 -4.296 0.774 -3.324 -3.051 2.033 -3.554 2.198 0.410 -3.578 -1.161 -2.054 ML 190 188 3 193 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 35 66 c g - - MP 195 194 6 199 6 2 2 47 67 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.491 -3.361 -3.346 0.293 -2.323 -3.881 2.989 -3.032 -3.385 0.675 -3.744 -1.364 1.285 -3.607 0.354 -2.264 ML 196 194 6 199 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 36 65 c g - - MP 201 200 6 205 6 2 2 45 65 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.306 -3.197 -3.198 0.429 -2.233 -3.764 2.764 -2.921 -3.232 0.790 -3.615 -1.228 1.389 -3.441 0.880 -2.128 ML 202 200 6 205 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 37 64 g u - - MP 207 206 6 211 6 2 2 43 63 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.107 -2.135 -3.222 1.385 -3.512 -4.296 0.774 -3.324 -3.051 2.033 -3.554 2.198 0.410 -3.578 -1.161 -2.054 ML 208 206 6 211 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 38 63 g u - - MP 213 212 6 217 6 2 2 41 61 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.107 -2.135 -3.222 1.385 -3.512 -4.296 0.774 -3.324 -3.051 2.033 -3.554 2.198 0.410 -3.578 -1.161 -2.054 ML 214 212 6 217 6 1 1 40 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 39 62 C G - - MP 219 218 6 223 6 2 2 39 59 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.704 -3.506 -3.524 0.164 -2.466 -4.041 3.160 -3.182 -3.557 0.589 -3.896 -1.441 1.116 -3.820 -0.164 -2.430 ML 220 218 6 223 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 6 1 1 38 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 222 218 6 223 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 223 223 5 223 6 1 1 39 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 224 224 6 224 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 40 61 G C - - MP 225 224 6 229 4 2 2 37 57 -6.442 -6.649 -0.076 -5.063 -3.861 -2.684 -3.917 0.753 -3.992 -4.312 0.443 -4.065 -3.692 3.324 -4.100 -0.368 0.024 -3.875 -1.556 -2.807 ML 226 224 6 229 4 1 1 38 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 227 224 6 229 4 1 1 37 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 228 224 6 229 4 0 0 36 56 -4.568 -4.250 -2.265 -0.520 IL 229 229 5 229 4 1 1 39 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 230 230 6 230 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 41 - A - - - ML 231 230 6 233 3 1 1 35 54 -7.501 -0.028 -6.155 1.424 -1.476 -1.195 -0.945 D 232 230 6 233 3 0 0 33 53 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 42 - U - - - ML 234 233 3 236 3 1 1 34 53 -7.501 -0.028 -6.155 -0.257 -0.666 -1.060 1.038 D 235 233 3 236 3 0 0 32 52 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 43 - A - - - ML 237 236 3 239 3 1 1 33 52 -7.501 -0.028 -6.155 1.424 -1.476 -1.195 -0.945 D 238 236 3 239 3 0 0 31 51 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 44 - A - - - ML 240 239 3 242 3 1 1 32 51 -7.501 -0.028 -6.155 1.424 -1.476 -1.195 -0.945 D 241 239 3 242 3 0 0 30 49 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 45 - U - - - ML 243 242 3 245 3 1 1 30 49 -7.501 -0.028 -6.155 -0.691 -0.843 -1.366 1.284 D 244 242 3 245 3 0 0 29 48 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 46 - U - - - ML 246 245 3 248 3 1 1 29 48 -7.501 -0.028 -6.155 -0.691 -0.843 -1.366 1.284 D 247 245 3 248 3 0 0 28 47 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 47 - A - - - ML 249 248 3 251 3 1 1 28 47 -7.501 -0.028 -6.155 1.424 -1.476 -1.195 -0.945 D 250 248 3 251 3 0 0 27 46 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 48 - A - - - ML 252 251 3 254 5 1 1 27 46 -6.698 -0.052 -6.513 -6.726 -7.617 1.424 -1.476 -1.195 -0.945 D 253 251 3 254 5 0 0 26 45 -4.959 -0.803 -4.221 -2.596 -2.508 IL 254 254 3 254 5 1 1 27 46 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 49 60 u a - - MP 255 254 3 259 6 2 2 26 45 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.412 -3.175 -3.324 0.461 -2.457 -3.951 1.846 -3.087 -3.342 0.897 -3.747 -1.086 2.735 -3.580 -0.153 -2.228 ML 256 254 3 259 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 257 254 3 259 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 258 254 3 259 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 259 259 5 259 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 260 260 6 260 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 50 59 G C - - MP 261 260 6 265 6 2 2 24 43 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.861 -2.684 -3.917 0.753 -3.992 -4.312 0.443 -4.065 -3.692 3.324 -4.100 -0.368 0.024 -3.875 -1.556 -2.807 ML 262 260 6 265 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 263 260 6 265 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 264 260 6 265 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 265 265 5 265 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 266 266 6 266 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 51 58 a u - - MP 267 266 6 271 6 2 2 22 41 -8.935 -8.874 -0.024 -7.650 -7.930 -8.325 -3.183 -2.388 -3.232 2.674 -3.261 -4.297 1.013 -3.296 -3.158 1.766 -3.671 0.015 0.582 -3.588 -0.938 -2.111 ML 268 266 6 271 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 269 266 6 271 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 270 266 6 271 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 271 271 5 271 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 272 272 6 272 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 52 57 C G - - MP 273 272 6 277 4 2 2 20 39 -6.442 -6.649 -0.076 -5.063 -3.704 -3.506 -3.524 0.164 -2.466 -4.041 3.160 -3.182 -3.557 0.589 -3.896 -1.441 1.116 -3.820 -0.164 -2.430 ML 274 272 6 277 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 275 272 6 277 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 276 272 6 277 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 277 277 5 277 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 278 278 6 278 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 53 - G - - - ML 279 278 6 281 3 1 1 17 35 -7.501 -0.028 -6.155 -0.376 -1.247 1.073 -0.505 D 280 278 6 281 3 0 0 16 35 -6.174 -1.687 -0.566 IL 281 281 3 281 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 54 - u - - - ML 282 281 3 284 3 1 1 15 34 -7.501 -0.028 -6.155 -0.154 -0.660 -0.028 0.573 D 283 281 3 284 3 0 0 15 33 -6.174 -1.687 -0.566 IL 284 284 3 284 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 55 - U - - - ML 285 284 3 287 3 1 1 13 32 -7.501 -0.028 -6.155 -0.691 -0.843 -1.366 1.284 D 286 284 3 287 3 0 0 13 32 -6.174 -1.687 -0.566 IL 287 287 3 287 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 56 - G - - - ML 288 287 3 290 2 1 1 1 1 * 0.000 -0.620 -1.658 1.350 -1.048 D 289 287 3 290 2 0 0 0 0 * 0.000 IL 290 290 3 290 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 291 290 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-288 ACC RF00787 DESC mir-288 microRNA precursor family LENG 96 MAXL 195 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Oct 31 22:55:47 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 12 EFFN 1.661133 CKSUM 3953006746 STATS LOCAL MSV -9.0809 0.71873 STATS LOCAL VITERBI -10.2708 0.71873 STATS LOCAL FORWARD -3.0665 0.71873 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.47181 1.45284 1.31282 1.31854 1.38629 1.38629 1.38629 1.38629 0.43729 1.39319 2.24497 0.18857 1.76109 0.00000 * 1 1.87292 2.45973 0.40882 2.33888 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.05535 3.61483 3.61483 1.46634 0.26236 1.83778 0.17337 2 2.24042 2.66458 0.28688 2.61243 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.05535 3.61483 3.61483 1.46634 0.26236 1.83778 0.17337 3 1.83560 1.07189 1.71475 1.14535 4 c - - < 1.38629 1.38629 1.38629 1.38629 0.05535 3.61483 3.61483 1.46634 0.26236 0.38323 1.14463 4 2.83095 0.34750 2.56586 1.84682 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 5 0.62612 2.32084 1.50285 1.93345 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 6 1.87649 1.36039 1.67822 0.90732 7 u - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 7 2.35849 2.86383 0.23798 2.81057 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 8 2.60408 1.64135 2.30799 0.45752 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 9 2.84502 0.34523 2.57166 1.84898 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 10 1.73160 2.08351 0.57642 1.99071 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 11 2.60402 1.64135 2.30796 0.45753 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 12 0.22953 2.88289 2.64258 2.55175 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 13 0.22953 2.88289 2.64258 2.55175 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 14 2.28238 2.30375 2.78347 0.30618 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 15 2.28238 2.30375 2.78347 0.30618 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 16 0.52067 2.36758 1.54499 2.31409 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 17 1.77359 2.53328 0.41141 2.42855 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 18 2.41723 0.31334 2.98150 2.04708 19 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 19 1.49261 1.85438 0.91240 1.52737 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 20 1.77366 2.53340 0.41136 2.42871 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 21 1.39340 1.57853 1.25481 1.34568 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 22 1.77389 2.53375 0.41119 2.42922 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 23 2.00323 0.60725 2.56039 1.41478 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 24 0.41227 2.39937 2.32580 1.90130 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 25 1.92575 0.57169 2.22719 1.70469 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 26 0.78840 2.28387 1.23422 1.88073 27 a - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 27 1.29276 2.42694 0.62533 2.28180 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 28 2.48541 0.37994 2.37632 1.96671 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 29 1.14720 2.37350 0.73045 2.22908 30 g - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 30 2.60483 1.64134 2.30825 0.45740 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 31 1.67220 1.80199 2.28948 0.60536 32 U - - - 1.38629 1.38629 1.38629 1.38629 0.09833 2.67494 3.69952 0.60881 0.78525 1.09861 0.40547 32 1.77248 2.53154 0.41224 2.42605 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 33 2.59639 0.51315 2.33227 1.47065 35 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 34 2.46406 0.68942 2.20745 1.19381 36 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 35 1.77377 2.53357 0.41127 2.42896 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 36 1.77373 2.53350 0.41131 2.42885 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 37 2.84462 0.34529 2.57150 1.84892 39 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 38 2.35928 2.86460 0.23775 2.81169 40 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 39 0.22953 2.88289 2.64258 2.55175 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 40 1.75524 2.03863 2.38752 0.50241 42 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 41 0.22953 2.88289 2.64258 2.55175 43 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 42 0.22953 2.88289 2.64258 2.55175 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 43 2.28238 2.30375 2.78347 0.30618 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 44 2.28238 2.30375 2.78347 0.30618 46 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 45 0.22953 2.88289 2.64258 2.55175 47 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 46 0.22953 2.88289 2.64258 2.55175 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 47 2.60476 1.64134 2.30823 0.45741 49 U - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 48 2.36040 2.86569 0.23741 2.81328 50 G - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 49 0.52011 2.36885 1.54503 2.31618 51 A - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 50 2.84563 0.34513 2.57191 1.84907 52 C - - < 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 51 1.94847 2.59086 0.43492 2.00076 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 52 1.61529 1.96557 1.36284 0.90348 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 53 2.28238 2.30375 2.78347 0.30618 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 54 2.32497 3.14505 0.23166 2.71908 56 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 55 2.12209 2.73723 0.29940 2.60091 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 56 2.54506 1.79953 2.18372 0.44078 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 57 3.02279 0.27882 2.69227 2.06410 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 58 0.52208 2.48194 1.47805 2.35335 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 59 3.02802 0.27813 2.69434 2.06512 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 60 2.12258 2.73779 0.29920 2.60166 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 61 2.64838 1.61404 2.33985 0.45600 63 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 62 2.64929 1.61403 2.34018 0.45586 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 63 1.78515 2.36980 0.45992 2.23122 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 64 1.88297 2.49448 0.39879 2.36243 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 65 2.65337 1.61399 2.34164 0.45519 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 66 2.28238 2.30375 2.78347 0.30618 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 67 2.28238 2.30375 2.78347 0.30618 69 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 68 2.41723 0.31334 2.98150 2.04708 70 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 69 0.52076 2.48568 1.47793 2.35858 71 A - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 70 2.45143 1.49469 2.17979 0.55087 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 71 2.21037 2.54177 0.32293 2.43513 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 72 2.50688 1.51826 2.23497 0.52359 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 73 2.41723 0.31334 2.98150 2.04708 75 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 74 2.32497 3.14505 0.23166 2.71908 76 G - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 75 0.22953 2.88289 2.64258 2.55175 77 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 76 2.64966 1.61403 2.34031 0.45580 78 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 77 1.70166 1.53745 1.44205 1.00444 79 u - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 78 2.65230 1.61400 2.34125 0.45537 80 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 79 1.91208 0.84369 1.65594 1.46451 81 c - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 80 0.22953 2.88289 2.64258 2.55175 82 A - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 81 2.65215 1.61400 2.34120 0.45539 83 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 82 2.55214 1.79989 2.18586 0.43946 84 U - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 83 2.28238 2.30375 2.78347 0.30618 85 U - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 84 2.41723 0.31334 2.98150 2.04708 86 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 85 0.52101 2.48497 1.47796 2.35759 87 A - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 86 2.21040 1.46094 1.75375 0.72319 88 u - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 87 2.12328 2.73860 0.29890 2.60274 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 88 0.52067 2.48594 1.47793 2.35895 90 A - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 89 3.03514 0.27719 2.69715 2.06650 91 C - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 90 0.94333 1.91863 1.27184 1.69528 92 a - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 91 2.41723 0.31334 2.98150 2.04708 93 C - - - 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 92 2.10412 2.71649 0.30697 2.57351 94 G - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 93 1.60215 1.88425 0.74981 1.74791 95 g - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 94 2.75433 0.34577 2.48533 1.92846 96 C - - > 1.38629 1.38629 1.38629 1.38629 0.05074 3.69952 3.69952 1.46634 0.26236 1.09861 0.40547 95 2.49000 0.45715 2.27665 1.70718 97 C - - > 1.38629 1.38629 1.38629 1.38629 0.12970 3.69952 2.33402 1.46634 0.26236 1.09861 0.40547 96 2.16028 2.95087 0.28463 2.52422 98 G - - : 1.38629 1.38629 1.38629 1.38629 0.02777 3.59759 * 1.46634 0.26236 0.00000 * //