INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-486 ACC RF00784 DESC microRNA mir-486 STATES 208 NODES 53 CLEN 68 W 84 ALPH RNA RF no CONS yes MAP yes DATE Mon Oct 25 14:41:43 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.3/miRNA_relabelled/update_old_rfam_mirnas/RF00784/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.003906 CKSUM 941562636 NULL 0.000 0.000 0.000 0.000 GA 69.00 TC 73.50 NC 68.50 EFP7GF -9.0791 0.71913 ECMLC 0.66760 -5.97088 2.37623 1600000 315731 0.003801 ECMGC 0.45352 -14.71591 -2.49610 1600000 102072 0.003919 ECMLI 0.65856 -4.42968 3.38593 1600000 206314 0.005816 ECMGI 0.47664 -10.43088 0.45720 1600000 71767 0.005574 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 84 103 -6.978 -7.185 -0.217 -3.004 IL 1 1 2 1 4 1 17 88 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 16 84 103 -7.846 -0.022 -6.500 -1.327 -2.505 1.658 -1.890 D 4 2 3 5 3 0 12 82 102 -7.109 -2.622 -0.268 IL 5 5 3 5 3 1 16 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - c - - - ML 6 5 3 8 3 1 15 83 102 -7.846 -0.022 -6.500 -0.246 0.230 -0.010 -0.014 D 7 5 3 8 3 0 12 81 101 -7.109 -2.622 -0.268 IL 8 8 3 8 3 1 15 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 14 82 101 -7.846 -0.022 -6.500 0.971 -1.299 0.041 -0.726 D 10 8 3 11 3 0 11 80 100 -7.109 -0.645 -1.501 IL 11 11 3 11 3 1 14 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 13 80 100 -7.992 -0.020 -6.646 -1.538 -1.525 -2.274 1.633 D 13 11 3 14 3 0 10 79 99 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 13 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 12 79 99 -7.992 -0.020 -6.646 -1.810 1.642 -2.636 -1.210 D 16 14 3 17 3 0 9 78 98 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 12 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - C - - - ML 18 17 3 20 3 1 11 78 98 -7.992 -0.020 -6.646 -1.810 1.642 -2.636 -1.210 D 19 17 3 20 3 0 8 77 97 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 11 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 10 77 97 -8.381 -0.247 -2.697 -1.538 -1.525 -2.274 1.633 D 22 20 3 23 3 0 8 76 96 -5.620 -0.734 -1.403 IL 23 23 3 23 3 1 11 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 69 - C - - MR 24 23 3 26 3 1 11 76 96 -8.156 -0.021 -6.473 -1.237 1.454 -2.038 -0.756 D 25 23 3 26 3 0 6 75 95 -7.545 -1.005 -1.010 IR 26 26 3 26 3 1 10 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 68 - a - - MR 27 26 3 29 3 1 10 75 95 -8.302 -0.019 -6.619 0.245 -0.300 0.225 -0.262 D 28 26 3 29 3 0 5 74 94 -6.931 -0.877 -1.161 IR 29 29 3 29 3 1 9 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 67 - u - - MR 30 29 3 32 3 1 10 74 94 -8.381 -0.018 -6.699 -0.762 0.091 -1.523 0.998 D 31 29 3 32 3 0 4 73 92 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 8 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 66 - A - - MR 33 32 3 35 3 1 9 73 93 -8.381 -0.018 -6.699 1.372 -1.639 -0.662 -1.125 D 34 32 3 35 3 0 3 72 91 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 8 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 65 - G - - MR 36 35 3 38 3 1 9 72 92 -8.381 -0.018 -6.699 -1.641 -2.870 1.737 -2.257 D 37 35 3 38 3 0 2 71 90 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 7 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 64 - G - - MR 39 38 3 41 3 1 8 71 91 -8.381 -0.018 -6.699 -0.409 -1.283 1.213 -0.947 D 40 38 3 41 3 0 2 70 89 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 6 72 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 63 - A - - MR 42 41 3 44 5 1 8 70 90 -7.118 -0.038 -6.933 -7.146 -8.037 1.310 -0.864 -1.301 -0.825 D 43 41 3 44 5 0 1 69 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 5 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 62 G C - - MP 45 44 3 49 6 2 9 69 89 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.801 -3.122 -4.906 0.161 -5.316 -4.717 -0.666 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.706 -3.781 ML 46 44 3 49 6 1 3 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 3 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 4 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 4 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 9 61 U A - - MP 51 50 6 55 6 2 8 67 87 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.260 -4.087 -4.090 -0.376 -3.017 -4.648 1.312 -3.718 -4.094 -0.133 -4.464 -1.983 3.360 -4.409 -0.692 -2.912 ML 52 50 6 55 6 1 3 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 3 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 4 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 4 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 10 60 A U - - MP 57 56 6 61 6 2 8 65 85 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.845 -2.863 -3.860 3.365 -4.225 -5.292 0.079 -3.898 -3.749 1.020 -4.299 -0.330 -0.338 -4.471 -1.862 -2.690 ML 58 56 6 61 6 1 2 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 2 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 3 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 4 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 11 59 C G - - MP 63 62 6 67 6 2 8 63 83 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.616 -4.527 -4.294 -0.753 -2.998 -4.697 3.571 -3.814 -4.346 -0.522 -4.600 -2.475 0.510 -4.680 -0.706 -3.183 ML 64 62 6 67 6 1 2 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 2 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 3 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 3 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 12 58 U A - - MP 69 68 6 73 6 2 7 61 81 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.260 -4.087 -4.090 -0.376 -3.017 -4.648 1.312 -3.718 -4.094 -0.133 -4.464 -1.983 3.360 -4.409 -0.692 -2.912 ML 70 68 6 73 6 1 2 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 2 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 3 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 3 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 13 57 G C - - MP 75 74 6 79 6 2 7 59 79 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.801 -3.122 -4.906 0.161 -5.316 -4.717 -0.666 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.706 -3.781 ML 76 74 6 79 6 1 2 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 2 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 2 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 3 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 14 56 A U - - MP 81 80 6 85 6 2 7 57 77 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -3.845 -2.863 -3.860 3.365 -4.225 -5.292 0.079 -3.898 -3.749 1.020 -4.299 -0.330 -0.338 -4.471 -1.862 -2.690 ML 82 80 6 85 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 2 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 2 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 15 55 G C - - MP 87 86 6 91 6 2 6 55 75 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.801 -3.122 -4.906 0.161 -5.316 -4.717 -0.666 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.706 -3.781 ML 88 86 6 91 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 2 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 2 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 16 54 C G - - MP 93 92 6 97 6 2 6 53 73 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.616 -4.527 -4.294 -0.753 -2.998 -4.697 3.571 -3.814 -4.346 -0.522 -4.600 -2.475 0.510 -4.680 -0.706 -3.183 ML 94 92 6 97 6 1 1 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 2 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 2 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 17 53 U A - - MP 99 98 6 103 6 2 4 51 71 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.260 -4.087 -4.090 -0.376 -3.017 -4.648 1.312 -3.718 -4.094 -0.133 -4.464 -1.983 3.360 -4.409 -0.692 -2.912 ML 100 98 6 103 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 2 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 52 G C - - MP 105 104 6 109 4 2 3 49 69 -6.978 -7.185 -0.052 -5.599 -4.801 -3.122 -4.906 0.161 -5.316 -4.717 -0.666 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.706 -3.781 ML 106 104 6 109 4 1 1 50 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 4 1 1 49 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 108 104 6 109 4 0 0 48 68 -4.568 -4.250 -2.265 -0.520 IL 109 109 5 109 4 1 1 51 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 110 110 6 110 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 19 - C - - - ML 111 110 6 113 3 1 1 47 66 -8.381 -0.018 -6.699 -1.810 1.642 -2.636 -1.210 D 112 110 6 113 3 0 0 46 65 -5.620 -0.734 -1.403 IL 113 113 3 113 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 51 - G - - MR 114 113 3 116 5 1 1 46 65 -7.118 -0.038 -6.933 -7.146 -8.037 -0.574 -1.155 1.159 -0.629 D 115 113 3 116 5 0 0 45 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 50 C G - - MP 117 116 3 121 6 2 2 45 64 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.616 -4.527 -4.294 -0.753 -2.998 -4.697 3.571 -3.814 -4.346 -0.522 -4.600 -2.475 0.510 -4.680 -0.706 -3.183 ML 118 116 3 121 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 49 C G - - MP 123 122 6 127 6 2 2 43 62 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.616 -4.527 -4.294 -0.753 -2.998 -4.697 3.571 -3.814 -4.346 -0.522 -4.600 -2.475 0.510 -4.680 -0.706 -3.183 ML 124 122 6 127 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 48 C G - - MP 129 128 6 133 6 2 2 41 60 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.616 -4.527 -4.294 -0.753 -2.998 -4.697 3.571 -3.814 -4.346 -0.522 -4.600 -2.475 0.510 -4.680 -0.706 -3.183 ML 130 128 6 133 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 47 G C - - MP 135 134 6 139 6 2 2 39 58 -9.119 -9.058 -0.021 -7.835 -8.115 -8.510 -4.801 -3.122 -4.906 0.161 -5.316 -4.717 -0.666 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.706 -3.781 ML 136 134 6 139 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 46 A U - - MP 141 140 6 145 6 2 2 37 56 -9.119 -3.533 -0.150 -7.835 -8.115 -8.510 -3.845 -2.863 -3.860 3.365 -4.225 -5.292 0.079 -3.898 -3.749 1.020 -4.299 -0.330 -0.338 -4.471 -1.862 -2.690 ML 142 140 6 145 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 36 55 -3.001 -0.309 -6.512 -4.679 -5.785 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 44 G C - - MP 147 146 6 151 4 2 2 35 54 -6.978 -7.185 -0.423 -2.063 -4.801 -3.122 -4.906 0.161 -5.316 -4.717 -0.666 -5.152 -4.366 3.652 -4.699 -0.823 -1.049 -4.506 -2.706 -3.781 ML 148 146 6 151 4 1 1 35 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 150 146 6 151 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 151 151 5 151 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 152 152 6 152 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 26 - G - - - ML 153 152 6 155 3 1 1 32 51 -7.665 -0.025 -6.319 -0.946 -2.053 1.521 -1.438 D 154 152 6 155 3 0 0 31 50 -7.718 -0.389 -2.110 IL 155 155 3 155 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - C - - - ML 156 155 3 158 3 1 1 31 50 -7.992 -0.020 -6.646 -1.144 1.291 -1.968 -0.243 D 157 155 3 158 3 0 0 30 49 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - c - - - ML 159 158 3 161 3 1 1 30 49 -7.992 -0.020 -6.646 -0.805 0.840 -1.608 0.389 D 160 158 3 161 3 0 0 29 48 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - c - - - ML 162 161 3 164 3 1 1 29 48 -7.992 -0.020 -6.646 -0.398 0.494 0.036 -0.310 D 163 161 3 164 3 0 0 28 47 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - u - - - ML 165 164 3 167 3 1 1 28 47 -7.992 -0.121 -3.713 0.034 -0.795 -0.442 0.735 D 166 164 3 167 3 0 0 27 46 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - u - - - ML 168 167 3 170 3 1 1 27 46 -7.894 -0.022 -6.548 -0.335 -0.874 0.178 0.614 D 169 167 3 170 3 0 0 26 45 -6.874 -0.797 -1.266 IL 170 170 3 170 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - C - - - ML 171 170 3 173 3 1 1 26 45 -7.992 -0.020 -6.646 -1.810 1.642 -2.636 -1.210 D 172 170 3 173 3 0 0 25 44 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 33 - A - - - ML 174 173 3 176 3 1 1 25 43 -7.992 -0.020 -6.646 1.259 -1.536 -0.390 -1.002 D 175 173 3 176 3 0 0 24 43 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - u - - - ML 177 176 3 179 3 1 1 23 42 -7.992 -0.020 -6.646 -0.409 0.379 -0.764 0.441 D 178 176 3 179 3 0 0 22 41 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 35 - u - - - ML 180 179 3 182 3 1 1 22 41 -7.992 -0.020 -6.646 0.199 -0.343 -0.326 0.340 D 181 179 3 182 3 0 0 21 40 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 36 - g - - - ML 183 182 3 185 3 1 1 21 40 -7.992 -0.020 -6.646 0.117 -0.487 0.527 -0.394 D 184 182 3 185 3 0 0 20 39 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 37 - U - - - ML 186 185 3 188 3 1 1 20 39 -7.992 -0.020 -6.646 -1.538 -1.525 -2.274 1.633 D 187 185 3 188 3 0 0 19 38 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 38 - G - - - ML 189 188 3 191 3 1 1 19 37 -7.992 -0.020 -6.646 -1.641 -2.870 1.737 -2.257 D 190 188 3 191 3 0 0 18 37 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 39 - c - - - ML 192 191 3 194 3 1 1 17 36 -7.992 -0.020 -6.646 0.397 0.525 -1.193 -0.309 D 193 191 3 194 3 0 0 17 36 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 40 - a - - - ML 195 194 3 197 3 1 1 16 35 -7.992 -0.020 -6.646 0.377 0.263 -1.075 0.039 D 196 194 3 197 3 0 0 16 34 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 41 - c - - - ML 198 197 3 200 3 1 1 15 33 -7.992 -0.020 -6.646 -0.370 0.494 -0.184 -0.093 D 199 197 3 200 3 0 0 15 33 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 42 - A - - - ML 201 200 3 203 3 1 1 13 31 -7.992 -0.020 -6.646 1.028 -1.427 0.055 -0.861 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 43 - G - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 -0.143 -1.803 1.249 -1.212 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-486 ACC RF00784 DESC microRNA mir-486 LENG 68 MAXL 152 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Oct 25 14:41:43 2021 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 16 EFFN 2.699219 CKSUM 941562636 STATS LOCAL MSV -8.7679 0.71913 STATS LOCAL VITERBI -9.0608 0.71913 STATS LOCAL FORWARD -3.2983 0.71913 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.61372 1.23284 1.23059 1.52661 1.38629 1.38629 1.38629 1.38629 0.15967 3.98739 2.04772 1.46634 0.26236 0.00000 * 1 2.62621 3.49366 0.16158 3.06915 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.04260 3.87032 3.87032 1.46634 0.26236 2.19238 0.11839 2 1.62845 1.17579 1.35209 1.44184 2 c - - : 1.38629 1.38629 1.38629 1.38629 0.04260 3.87032 3.87032 1.46634 0.26236 2.19238 0.11839 3 0.66281 2.41844 1.33190 2.02826 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04260 3.87032 3.87032 1.46634 0.26236 0.25270 1.49923 4 2.76653 2.70412 3.28978 0.18281 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 5 3.04713 0.16509 3.62256 2.55134 5 C - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 6 3.04713 0.16509 3.62256 2.55134 6 C - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 7 2.76653 2.70412 3.28978 0.18281 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 8 2.68939 3.40311 0.14692 3.33966 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 9 3.16019 2.04773 2.93171 0.25457 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 10 0.27967 2.97809 1.97977 2.90087 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 11 3.36572 0.20247 3.16113 2.24077 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 12 3.16026 2.04774 2.93174 0.25456 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 13 2.69101 3.40517 0.14660 3.34248 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 14 0.27987 2.97711 1.97957 2.89950 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 15 2.69022 3.40416 0.14676 3.34110 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 16 3.36147 0.20286 3.15900 2.24000 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 17 3.15706 2.04750 2.93023 0.25488 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 18 2.68939 3.40311 0.14692 3.33967 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 19 3.04713 0.16509 3.62256 2.55134 19 C - - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 20 3.36540 0.20250 3.16097 2.24071 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 21 3.36777 0.20229 3.16215 2.24114 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 22 3.36782 0.20228 3.16218 2.24115 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 23 2.69236 3.40688 0.14633 3.34484 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 24 0.27968 2.97802 1.97976 2.90077 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 25 2.68673 3.39975 0.14745 3.33505 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.31377 3.98739 1.38323 1.46634 0.26236 1.09861 0.40547 26 2.31231 3.13021 0.23530 2.70417 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04952 3.72314 3.72314 1.46634 0.26236 0.13796 2.04898 27 2.41589 0.40025 3.00716 1.65481 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 28 2.10298 0.72381 2.68066 1.12550 28 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 29 1.77792 0.96313 1.31817 1.70545 29 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 30 1.37930 2.01046 1.69602 0.84187 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.11966 3.98739 2.36197 1.46634 0.26236 1.09861 0.40547 31 1.69929 2.07693 1.22071 0.92420 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04096 3.90869 3.90869 1.46634 0.26236 0.33193 1.26420 32 3.04713 0.16509 3.62256 2.55134 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 33 0.45446 2.62260 1.66522 2.26868 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 34 1.75479 1.06470 1.94789 1.07983 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 35 1.25071 1.62765 1.60482 1.15080 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 36 1.33878 1.73159 0.94686 1.75518 36 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 37 2.76653 2.70412 3.28978 0.18281 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 38 2.86876 3.76862 0.12237 3.34311 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 39 1.09787 0.94921 2.34047 1.69778 39 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 40 1.11344 1.15318 2.22117 1.39652 40 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 41 1.73845 0.97250 1.49045 1.51050 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 42 0.62097 2.53497 1.32000 2.15264 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 43 1.54778 2.83815 0.44353 2.44207 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 44 3.49611 0.17748 3.22498 2.37998 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.31377 1.38323 3.98739 0.14188 2.02287 1.09861 0.40547 45 3.12554 2.29331 2.78835 0.23113 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 46 3.54259 0.17386 3.24645 2.38889 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 47 2.52218 3.33210 0.17395 3.13132 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 48 2.52385 3.33450 0.17354 3.13415 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 49 2.52618 3.33788 0.17297 3.13810 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 50 1.92619 2.28043 0.49551 1.94635 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 51 3.53011 0.17481 3.24074 2.38653 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 52 0.28901 3.11691 1.88421 2.90497 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 53 2.51773 3.32568 0.17504 3.12381 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 54 3.53295 0.17459 3.24204 2.38707 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 55 3.12237 2.29286 2.78707 0.23147 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 56 3.53618 0.17435 3.24352 2.38768 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 57 0.28858 3.11942 1.88454 2.90790 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 58 2.52059 3.32980 0.17434 3.12863 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 59 3.12920 2.29383 2.78982 0.23075 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 60 0.28790 3.12340 1.88507 2.91254 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 61 3.55804 0.17269 3.25347 2.39178 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 62 0.41027 2.03459 2.44800 2.12586 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 63 1.78372 2.37339 0.46172 2.21983 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 64 2.86876 3.76862 0.12237 3.34311 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 65 0.37423 2.70639 1.88343 2.37158 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 66 2.06234 1.29653 2.60166 0.64395 67 U - - : 1.38629 1.38629 1.38629 1.38629 0.10816 3.98739 2.47735 1.46634 0.26236 1.09861 0.40547 67 1.22935 1.58413 1.17731 1.63843 68 g - - : 1.38629 1.38629 1.38629 1.38629 0.17258 3.91974 1.97569 1.46634 0.26236 1.87594 0.16630 68 2.57089 0.26655 3.14122 2.16904 69 C - - : 1.38629 1.38629 1.38629 1.38629 0.02331 3.77046 * 1.46634 0.26236 0.00000 * //