# STOCKHOLM 1.0
#=GF ID mir-191
#=GF AC RF00764
#=GF DE mir-191 microRNA precursor family
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 54.0
#=GF NC 53.8
#=GF TC 54.0
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000194;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 14691248
#=GF RT Identification of many microRNAs that copurify with polyribosomes in
#=GF RT mammalian neurons.
#=GF RA Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G
#=GF RL Proc Natl Acad Sci U S A. 2004;101:360-365.
#=GF RN [2]
#=GF RM 15345052
#=GF RT Microarray analysis of microRNA expression in the developing mammalian
#=GF RT brain.
#=GF RA Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P,
#=GF RA Constantine-Paton M, Horvitz HR
#=GF RL Genome Biol. 2004;5:R68.
#=GF RN [3]
#=GF RM 16766679
#=GF RT Identification and characterization of two novel classes of small RNAs in
#=GF RT the mouse germline: retrotransposon-derived siRNAs in oocytes and germline
#=GF RT small RNAs in testes.
#=GF RA Watanabe T, Takeda A, Tsukiyama T, Mise K, Okuno T, Sasaki H, Minami N,
#=GF RA Imai H
#=GF RL Genes Dev. 2006;20:1732-1743.
#=GF RN [4]
#=GF RM 17604727
#=GF RT A mammalian microRNA expression atlas based on small RNA library
#=GF RT sequencing.
#=GF RA Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S,
#=GF RA Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V,
#=GF RA Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B,
#=GF RA Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G,
#=GF RA Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di
#=GF RA Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN,
#=GF RA Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo
#=GF RA JJ, Sander C, Zavolan M, Tuschl T
#=GF RL Cell. 2007;129:1401-1414.
#=GF RN [5]
#=GF RM 20403161
#=GF RT Small RNA expression and strain specificity in the rat.
#=GF RA Linsen SE, de Wit E, de Bruijn E, Cuppen E
#=GF RL BMC Genomics. 2010;11:249.
#=GF RN [6]
#=GF RM 18463306
#=GF RT Conservation of small RNA pathways in platypus.
#=GF RA Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z,
#=GF RA Kellis M, Grutzner F, Stark A, Hannon GJ
#=GF RL Genome Res. 2008;18:995-1004.
#=GF RN [7]
#=GF RM 17105755
#=GF RT Discovery and profiling of bovine microRNAs from immune-related and
#=GF RT embryonic tissues.
#=GF RA Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC,
#=GF RA Capuco AV, Smith TP
#=GF RL Physiol Genomics. 2007;29:35-43.
#=GF RN [8]
#=GF RM 17306260
#=GF RT Identification and characterization of microRNAs from the bovine adipose
#=GF RT tissue and mammary gland.
#=GF RA Gu Z, Eleswarapu S, Jiang H
#=GF RL FEBS Lett. 2007;581:981-988.
#=GF RN [9]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF WK miR-191
#=GF SQ 24

URS000075B686_13616/1-74   --------AGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCAAUUGG-AUUUCGUUCCCUGCU---------
URS000075EAD6_9258/16-106  AGCUUGACAGCAGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCAGUUGG-AUUUCGUUCCCUGCUAUCCUGCAA
URS000075C2AC_10090/1-74   --------AGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCACUUGG-AUUUCGUUCCCUGCU---------
URS000075E9FE_9823/1-80    ------ACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCACUUGG-AUUUCGUUCCCUGCUCUCU-----
URS00007E4659_9925/1-91    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCUCUCCUGCCU
URS000075AD33_10029/1-83   -----GACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCGAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCUCUCCUG---
URS000068C860_9940/1-91    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCUCUCCUGCCU
URS000075C8B7_9598/2-91    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUCCCCUGCUCUCCUGCC-
URS000075DDC5_9593/7-97    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUCCCCUGCUCUCCUGCCU
URS000075BBD9_9606/2-92    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUCCCCUGCUCUCCUGCCU
URS000075BBD9_9544/2-92    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUCCCCUGCUCUCCUGCCU
URS000075BBD9_9600/2-92    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUCCCCUGCUCUCCUGCCU
URS000068C860_9913/1-91    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCUCUCCUGCCU
URS000075BFD1_9796/1-74    --------AGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCU---------
URS00007E4C36_9615/1-64    --------------CAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCC-------------
URS00007E4145_9986/2-92    GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCUUUCCUGCCU
URS00007E4C36_246437/1-64  --------------CAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCC-------------
URS0000641524_10116/1-91   GGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCACUUGG-AUUUCGUUCCCUGCUCUCCUGCCU
URS00007E3F9C_28377/1-90   -GUUUGAUAGUGGGCAACGGAAUCCCAAAAGCAGCUGUUUUCCUCUUAAAGUUCCAGCUGCACUUGG-AUUUCGUUCCUUGCUUUCCUACCC
URS0000D5348C_8665/1-82    -------GAAUGGGCAACGGAAUCCCAAAAGCAGCUGUUUUGCUCU--GUUUCCCAGCUGCACUUGG-AUUCCGUUCCUUGCUCUUUUGCCC
URS000075F0D3_8364/1-86    GGCGGUAGCUCUGACAACGGAAUCCCAAAAGCAGCUGUUGUG----AAAAUGUUCAGCUGCAGUUGG-GACCCGUUCACGGAUCUAUUGCC-
URS000075C33F_10116/15-105 GGCAGGAGAGCAGGGAACGAAAUCC-AAGUGCAGCUGGAAUGCUCUGGAGACAACAGCUGCUUUUGGGAUUCCGUUGCCCGCUGUCCAGCCA
URS00007E419B_9796/17-107  GGCAGAAGAGCAGGGAACGAAAUCC-AAGCGCAGCUGGAAUGCUCUGGAGACAACAGCUGCUUUUGGGAUUCCGUUGCCCGCUGUCCAGCCG
URS0000D513F9_29078/1-86   ---UGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGG-AUUUCGUUCCCUGCUCUCCUGC--
#=GC SS_cons               ::::::::<<<<<---<<<<<<<<<-<<--<<<<<<<_________________>>>>>>>-->>>>.>>>>>>>--->>>>>:::::::::
#=GC RF                    GGCuGgAcaGCgGGcAACGgaauCCCAAAAGCAGCUGUUgUcucCaGAgcAuUcCAGCUGCacUUGG.auucCGUUcCCcGCucUccUGCCu
//
